View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16931_high_2 (Length: 859)
Name: NF16931_high_2
Description: NF16931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16931_high_2 |
 | |
|
| [»] scaffold0497 (2 HSPs) |
| | |
|
| [»] scaffold0850 (2 HSPs) |
| | |
|
| [»] scaffold0027 (2 HSPs) |
| | |
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| [»] scaffold1147 (1 HSPs) |
| | |
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| [»] scaffold0048 (2 HSPs) |
| | |
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| [»] scaffold1571 (2 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 397; Significance: 0; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 18 - 480
Target Start/End: Complemental strand, 2094502 - 2094044
Alignment:
| Q |
18 |
acagcaaacgatataaagaaatttaaattaattcacctcccaaacttggtaagctttcggccagagtagttggttagggccgcattctaatatgtgtata |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2094502 |
acagcaaacgatataaagaaatttaaattaattcacctcccaaacttggtaagctttcggccagagtagttggttagggccgcattctaatatgtgtata |
2094403 |
T |
|
| Q |
118 |
taaa-gaatcatattgacatgctagaaaagcacaaggggacaatcttaaaatgtacataggctaatatggctttatggaaggatatgaaattatgaattt |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2094402 |
taaaagaatcatattgacatgctagaaaagcacaaggggacaatcttaaaatgtacataggctgatatggctttatggaaggatatgaaattatgaattt |
2094303 |
T |
|
| Q |
217 |
tctccctgtggtacagaagtgnnnnnnncttcttctttcattctgttaattgtatgtaggtgtgtatatgtgtatagtgcatgtgatgtaaaagaatgat |
316 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2094302 |
tctccctgtggtacagaagtgtttttt--ttcttctttcattctgttaattgtatgtaggtgtgtatatgtgtatagtgcatgtgatgtaaaagaatgat |
2094205 |
T |
|
| Q |
317 |
gtgaaggtatacgtgctgcaccttcaaaattaatataaaatcaagtgtttagtatccaaagcgagtgtattttctttaatttatatttttggtttgtctt |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2094204 |
gtgaaggtatacgtgctgcaccttcaaaattaatataaaatcaagtgtttagtatccaaagcgagtgtgttttctttaatttatatttttggtttgtctt |
2094105 |
T |
|
| Q |
417 |
ctttattcgttctacgctactttccaattcaatagccattgtgtcgagatcttttgatttctcc |
480 |
Q |
| |
|
| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2094104 |
c---attcgttcttcgctactttcgaattcaatagccattgtgtcgagatcttttgatttctcc |
2094044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 569 - 842
Target Start/End: Complemental strand, 2093909 - 2093636
Alignment:
| Q |
569 |
ttattgatcattagatcaaatatagaacatacttttatcatagactatagacaccgtannnnnnnnctctctccttcaccctaagtcaacacaccgaaac |
668 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2093909 |
ttattgatcattagatcaaatatagaacatacttttatcatagactatagacaccgtattttttt-ctctctccttcaccctaagtcaacacaccgaaac |
2093811 |
T |
|
| Q |
669 |
cctccatttgtttttgtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata-tatattttttagattccacccttaaa |
767 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | || | | ||||||||||||||||||| || |
|
|
| T |
2093810 |
cctccatttgtttttgggttaatagggtttttggtccctgtaatatagtgcaattttggttttagtctctgtatttttttttttagattccacccttgaa |
2093711 |
T |
|
| Q |
768 |
aagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2093710 |
aagtgaagatttttcaggattgacccctcaccccaatgtgtcagcagaatctcctacatggtagtgacgtgtcaa |
2093636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 46118315 - 46118471
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttttagattccacccttaaaaagtgaagattatttagg |
785 |
Q |
| |
|
|||||||| |||||| || |||||||||||||| |||||||||||| || ||| | ||||||||||||||||||| |||| | || ||| || ||| |
|
|
| T |
46118315 |
gttaatagtgttttttttctctgtaatatagtgcacttttggttttagcccccgtattttttttttagattccacccttgaaaaataaaaattcttcagg |
46118414 |
T |
|
| Q |
786 |
attgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
46118415 |
attgacccctcaccccaatgtggcagcagaatctcctacgtggcagtaacgtgtcaa |
46118471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 46131449 - 46131605
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttttagattccacccttaaaaagtgaagattatttagg |
785 |
Q |
| |
|
|||||||| |||||| || |||||||||||||| |||||||||||| || ||| | ||||||||||||||||||| |||| | || ||| || ||| |
|
|
| T |
46131449 |
gttaatagtgttttttttctctgtaatatagtgcacttttggttttagcccccgtattttttttttagattccacccttgaaaaataaaaattcttcagg |
46131548 |
T |
|
| Q |
786 |
attgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
46131549 |
attgacccctcaccccaatgtggcagcagaatctcctacgtggcagtaacgtgtcaa |
46131605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 749 - 842
Target Start/End: Complemental strand, 30707454 - 30707361
Alignment:
| Q |
749 |
tttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||| ||| |||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
30707454 |
tttagattccactcttcaaaaatgaatattcttcaggattgacccctcaccccaatgtgtcagcagaatctcctacgtggcaatgacgtgtcaa |
30707361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 686 - 829
Target Start/End: Complemental strand, 7535483 - 7535337
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata---tattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
7535483 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaattttttttttagattccacccttgaaaaatgaagattcttc |
7535384 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggc |
829 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
7535383 |
aggattagcccctcaccccaatgactcagcagaatctcctacgtggc |
7535337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 16076469 - 16076373
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||| |||| |||| |||| ||| |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
16076469 |
ttttttagattccatccttgaaaaatgaaaattctttaggattggcccctcaccccaatgtgtcagcagaatttcctacgtggcagtgacttgtcaa |
16076373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 750 - 842
Target Start/End: Original strand, 45029909 - 45030001
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||| |||| |||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
45029909 |
ttagattccacccttgaaaaatgaagattcttcaggatttacccctcacccgaatgtgtcagcagaatctcctacgtggcggtgacgtgtcaa |
45030001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 686 - 830
Target Start/End: Original strand, 16075483 - 16075628
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
||||| || |||||||| || || |||||| |||| |||||||||||| || | || ||| ||||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
16075483 |
gttaacagtgtttttggcccctgcaatataatgcacttttggttttagcccctgtaatttattttttttagattccacccttgaaaaatgaagattcttt |
16075582 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggca |
830 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
16075583 |
aggattgacccctcaccccaa--tgtcagcagaatatcctacgtggca |
16075628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 686 - 829
Target Start/End: Original strand, 7533591 - 7533737
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattt---tttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | |||||||||||||||| |||| |||||||| || |
|
|
| T |
7533591 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaaatttagattccacccttgaaaaatgaagattcttc |
7533690 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggc |
829 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
7533691 |
aggattggcccctcaccccaatgactcagcagaatctcctacgtggc |
7533737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 765 - 842
Target Start/End: Complemental strand, 45030871 - 45030794
Alignment:
| Q |
765 |
aaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||| |||||||| || |||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
45030871 |
aaaaaatgaagattcttcaggattagcccctcacctcaatgtgtcagcagaatctcctacgtggaagtgacgtgtcaa |
45030794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 571
Target Start/End: Complemental strand, 2094021 - 2093936
Alignment:
| Q |
494 |
gaataagagatcttttgatttctcaatcaatggcacgtaggt--------aacttgggaacggtgacatttaacatgggaaagtta |
571 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2094021 |
gaataaaagatcttttgatttctcaatcaatggcacatattacctacttgaacttgggaacggtgacatttagcatgggaaagtta |
2093936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 8e-45; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 679 - 842
Target Start/End: Complemental strand, 33586558 - 33586394
Alignment:
| Q |
679 |
tttttgtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttttt-agattccacccttaaaaagtgaagat |
777 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||| |||||||||||| || | || || |||||| ||||||||||||| |||| ||||||| |
|
|
| T |
33586558 |
tttttgggttaatagtgtttttggtccctgtaatatagtgcacttttggttttagcccctgtaaatttttttttagattccacccttgaaaaatgaagat |
33586459 |
T |
|
| Q |
778 |
tatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |
|
|
| T |
33586458 |
tcttcaggattgacccctcaccccaatgtgttagcagaatctcctacgtggcagtgacatgtcaa |
33586394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 8304233 - 8304075
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||| ||||| |||||| || | || | | ||||||||||||||||||| |||| |||||||| || | |
|
|
| T |
8304233 |
gttaatagtgtttttggtccctgtaatatagtgcacttttgattttagcccctgtaatttttttttttagattccacccttgaaaaatgaagattcttca |
8304134 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8304133 |
ggattggcccctcactccaatgagtcagcagaatctcctacatggcagggacgtgtcaa |
8304075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 41120 - 40961
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatata---ttttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || | |||||||||||| |||| ||||||| || | || | | |||||||||||||||||||||||| |||| ||| || |
|
|
| T |
41120 |
gttaatagtgtttttggcccctctaatatagtgcacttttagttttagcccctgtaaaaaaaattttttagattccacccttaaaaaatgaaaattcttc |
41021 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
41020 |
aggattggcccctcaccccaatgtgtcagcagaatcttctacgtggcagtgacgtgtcaa |
40961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 8903684 - 8903588
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||| |||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8903684 |
ttttttagatttcacccttgaaaaatgaagattctttaggattggcccctccccccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
8903588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 687 - 842
Target Start/End: Complemental strand, 32901632 - 32901474
Alignment:
| Q |
687 |
ttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttt---tagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
||||||| ||||||| || |||||||||||||| |||||||||||| || | || | | |||| |||||||||||||| |||| |||||||| || | |
|
|
| T |
32901632 |
ttaatagtgtttttgacccctgtaatatagtgcacttttggttttagcccctgtaaaaaattttctttagattccacccttgaaaaatgaagattcttca |
32901533 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
32901532 |
ggattggcccctcaccccaatgagtcagcagaatctcatacgtggcagtgacgtgtcaa |
32901474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 44077391 - 44077233
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
||||||| ||||||| ||| |||||||||||||| ||||||||||||||| | || | | |||||||||||||| |||| ||| |||| ||| |||| |
|
|
| T |
44077391 |
gttaataacgtttttgatccctgtaatatagtgcacttttggttttagtccctgtaattttcttttttagattccatccttggaaaatgaaaattcttta |
44077292 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| ||| |||||| |||||| |
|
|
| T |
44077291 |
ggattgacacctcacctcaatgtgtcagcagaatctcctacgtggtagtgacatgtcaa |
44077233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 32900392 - 32900550
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttt--ttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| ||||||| || |||||||||| ||| ||||| ||||| |||| || || |||| |||||||||||||| |||| |||||||| || | |
|
|
| T |
32900392 |
gttaatagtgtttttgtcccctgtaatatagcgcacttttgattttaacccatgtaaattttttttttagattccaccctagaaaaatgaagattcttca |
32900491 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
32900492 |
ggattgacccctcaccccaatgagtcagcagaacctcctacgtggcagtgatgtgtcaa |
32900550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 746 - 842
Target Start/End: Original strand, 7690296 - 7690392
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| || ||||||| ||| ||||| |||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
7690296 |
ttttttagattccacccttgaaaaatgaagattcttcaggattggcccatcacctcaatgtgtcagcagaatctcctacatagcagtaacgtgtcaa |
7690392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 687 - 842
Target Start/End: Original strand, 30779874 - 30780027
Alignment:
| Q |
687 |
ttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttttagattccacccttaaaaagtgaagattatttagga |
786 |
Q |
| |
|
||||||| |||||||| || |||||||| ||| | |||||||||||| || | || || |||||||||||||||| || |||| | |||||| ||| ||| |
|
|
| T |
30779874 |
ttaatagtgtttttggccc-tgtaatatggtgtacttttggttttagcccttgta-attttttttagattccacctttgaaaaataaagattctttcgga |
30779971 |
T |
|
| Q |
787 |
ttgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
30779972 |
ttgacctctgacctcaatgtgtcagcagaatctcctacgtggcagtgatgtgtcaa |
30780027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 750 - 838
Target Start/End: Original strand, 38573700 - 38573788
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtg |
838 |
Q |
| |
|
||||||||||||||| |||| |||||||| || ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
38573700 |
ttagattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaacgtgtcagcagaatctcctatgtggcagtgacgtg |
38573788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 709 - 842
Target Start/End: Original strand, 8303007 - 8303142
Alignment:
| Q |
709 |
taatatagtgcaattttggttttagtcca-tata-tatattttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgt |
806 |
Q |
| |
|
|||||||||||| ||||||||||||||| || | | | ||||||||||||||||||| |||| |||||||| || ||||||| || |||||||||||| |
|
|
| T |
8303007 |
taatatagtgcacttttggttttagtcctgtagaattttttttttagattccacccttgaaaaatgaagattcttcaggattggccactcaccccaatga |
8303106 |
T |
|
| Q |
807 |
gtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||| | |||| ||| |||||| |
|
|
| T |
8303107 |
gtcagcagaatctcctacgtcgcagcgacatgtcaa |
8303142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 746 - 824
Target Start/End: Original strand, 44076486 - 44076564
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctac |
824 |
Q |
| |
|
||||||||||||||||||| |||| |||| ||| || ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
44076486 |
ttttttagattccacccttgaaaaatgaaaattcttgaggattggcccctcaccccaatgtgtcagcagaatctcctac |
44076564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 686 - 841
Target Start/End: Complemental strand, 38574740 - 38574589
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatat----atattttttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| | |||||||||||| || | ||| || ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
38574740 |
gttaatagtgtttttggcccctgtaatatagtgtacttttggttttagcccctgtatttttattttttttagattccacccttgaaaaatgaagattctt |
38574641 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtca |
841 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
38574640 |
g--------cccctcaccccaatgtatcagcagaatctcctacgtggcagtgacgtgtca |
38574589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 760 - 842
Target Start/End: Complemental strand, 30781009 - 30780927
Alignment:
| Q |
760 |
cccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||| |||| |||||||| |||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
30781009 |
cccttgaaaaatgaagattctttaggattggcccctgacctcaatgtgtcagcagaatctcctacgtggcagtgacatgtcaa |
30780927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 749 - 823
Target Start/End: Original strand, 16432678 - 16432752
Alignment:
| Q |
749 |
tttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctccta |
823 |
Q |
| |
|
|||||||||||||||| |||| |||||||| || ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
16432678 |
tttagattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgactcagcagaatctccta |
16432752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 686 - 829
Target Start/End: Complemental strand, 16434603 - 16434458
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttt--ttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||| |||| |||||||| || | |
|
|
| T |
16434603 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaaattagattccacccttgaaaaatgaagattcttca |
16434504 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggc |
829 |
Q |
| |
|
||| || ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
16434503 |
ggactggcccctcaccccaatgactcagcagaatctcctacgtggc |
16434458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 87; Significance: 3e-41; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 686 - 839
Target Start/End: Complemental strand, 25275564 - 25275410
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata-tatattttttagattccacccttaaaaagtgaagattatttag |
784 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || |||| | | ||||||||||||||||||| |||| |||||||| || || |
|
|
| T |
25275564 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctataattttttttttagattccacccttgaaaaatgaagattcttcag |
25275465 |
T |
|
| Q |
785 |
gattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgt |
839 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
25275464 |
gattggcccctcaccccaatgtgtcagcagaatctcctacgtggcaatgacgtgt |
25275410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 37413720 - 37413879
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tata-ttttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| | |||||| || |||||||||||||| |||| |||||||||| | || | || |||||||||||||| |||| |||| |||||||| || |
|
|
| T |
37413720 |
gttaatagtgcttttggcccctgtaatatagtgcacttttagttttagtccctgtaattttatttttttagattccatccttgaaaaatgaagattcttc |
37413819 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37413820 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
37413879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 47497555 - 47497399
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttttagattccacccttaaaaagtgaagattatttagg |
785 |
Q |
| |
|
|||||||| |||||||| | | |||||||||||| |||||||||||| | | || || |||||| |||||||||||| |||| |||||||| || || |
|
|
| T |
47497555 |
gttaatagtgtttttggcctctataatatagtgcacttttggttttagcctctgtaaatttttttttgattccacccttgaaaaatgaagattcttcggg |
47497456 |
T |
|
| Q |
786 |
attgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
47497455 |
attgacccctcaccccaatgtgtcaacagaatctcctacatcgcagtgacgtgtcaa |
47497399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 31430946 - 31431106
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata----tattttttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
31430946 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaattttgttttttagattccacccttgaaaaatgaagattctt |
31431045 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
31431046 |
caggattgacccctcaccccaatgagtcaacagaatctcctacgtggcagtgatgtgtcaa |
31431106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 17238342 - 17238183
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatata---ttttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
||||||| |||||||| || ||||||||| |||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
17238342 |
gttaatattgtttttggcccctgtaatataatgcacttttggttttagcccctgtaaaaaaaattttttagattccacccttgaaaaatgaagattcttc |
17238243 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
17238242 |
aggattgacccctcaccccaatgagtcagcagaatctcctacgtggcagcgacgtgtcaa |
17238183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 31433695 - 31433536
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| | |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
31433695 |
gttaatagtgtttttggcctctgtaatatagtgcacttttggttttagcccctgtaaatttttttttttagattccacccttgaaaaatgaagattcttc |
31433596 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
31433595 |
aggattgacccctcaccccaatgagtcagcagaatctcccacgtggcagtgatgtgtcaa |
31433536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 48909814 - 48909655
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| ||||||| || |||||||||||| | |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
48909814 |
gttaatagtgtttttgatctctgtaatatagtgtacttttggttttagcccctgtaaatttttttttttagattccacccttgaaaaatgaagattcttc |
48909715 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48909714 |
aggattgaaccctcaccccaatgagtcagcagaatctcctacgtggcagtgacgtgtcaa |
48909655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 25274660 - 25274820
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttt----ttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||| |||||| || | || || |||| ||||||||||||||| |||| | |||||| || |
|
|
| T |
25274660 |
gttaatagtgtttttggcccctgtaatatagtgcacttttagttttaacccctgtaaattttttttttttagattccacccttgaaaaataaagattctt |
25274759 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25274760 |
caggattgacccctcacccaaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
25274820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 685 - 842
Target Start/End: Original strand, 25489919 - 25490079
Alignment:
| Q |
685 |
tgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata---tattttttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||| ||| || |
|
|
| T |
25489919 |
tgttaatagtgtttttgacccctgtaatatagtgcacttttggttttagcccctgtaaaattttttttttagattccacccttgaaaaatgaatattctt |
25490018 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25490019 |
caggattggcccctcacctcaatgagtcagcagaatctcctacgtggcagtgacgtgtcaa |
25490079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 9113276 - 9113435
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata---tattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || || | ||||||||| ||||||||||||||| | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
9113276 |
gttaatagtgtttttggcccctgcagtatagtgcacttttggttttagtccttgtaaaagtttttttttagattccacccttgaaaaatgaagattcttc |
9113375 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| ||||| ||||||||||||||| ||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
9113376 |
aagattggcccctcaccccaatgagtcagcagaatttcctacgtggcagtgatgtgtcaa |
9113435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 9119044 - 9118885
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttttt---agattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | | || |||||| ||||||||||||| |||| | |||||| || |
|
|
| T |
9119044 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgcaaatttttttttttagattccacccttgaaaaattaagattcttc |
9118945 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |
|
|
| T |
9118944 |
aggattggcccctcaccccaatgagtcagcagaatctcctatgtggctgtgacgtgtcaa |
9118885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 25491212 - 25491053
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
25491212 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaatttttttttttagattccacccttgaaaaatgaagattcttc |
25491113 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||| ||||||||||| |||||||||| ||||||| || |||||| ||||||| |
|
|
| T |
25491112 |
aggattggcccttcaccccaatgagtcagcagaaactcctacgtgacagtgatgtgtcaa |
25491053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 31432516 - 31432675
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
31432516 |
gttaataatgtttttggcccctgtaatatagtgcacttttggttttagcccttgtaaatttttttttttagattccacccttgaaaaatgaagattcttc |
31432615 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||| |||| |||| ||||||| |
|
|
| T |
31432616 |
aggattgaccactcaccccaataagtcagcagaatctcctacgtggctgtgatgtgtcaa |
31432675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 17237329 - 17237487
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattt--tttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| |||||||||||| || | || | | |||||||| ||||||| |||| |||||||| || | |
|
|
| T |
17237329 |
gttaatagtatttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaatttagatttcacccttgaaaaatgaagattcttca |
17237428 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||| |
|
|
| T |
17237429 |
ggattggcccctcaccccaatgagtcagcagaatctcctacgtggcagtgacctgtcaa |
17237487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 43101235 - 43101139
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||| || ||||||| | ||| ||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
43101235 |
ttttttagatttcacccttgaaaaatgaagattcttcaggattggctcctaaccccaatgtgtcagcagaatctgctatgtggcagtgacgtgtcaa |
43101139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 758 - 842
Target Start/End: Original strand, 47496644 - 47496728
Alignment:
| Q |
758 |
cacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| |||| |||| ||| || || |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
47496644 |
cacccttgaaaaatgaaaattcttcagaattgacccctcaccccaatgtgtcagcagaatcttctacgtggcaatgacgtgtcaa |
47496728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 746 - 842
Target Start/End: Original strand, 43100565 - 43100661
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| ||| || | || |||||||| || | ||||| |||||||||| |||||||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
43100565 |
ttttttagatttcacttttgagaaatgaagattcttcaagattggcccctcacccaaatgtgtcagcagaatctcctatatgacaatgacgtgtcaa |
43100661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 5e-40; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 679 - 842
Target Start/End: Original strand, 19298561 - 19298727
Alignment:
| Q |
679 |
tttttgtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaag |
775 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||| | |||||||||||| || | || ||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
19298561 |
tttttgggttaatagtgtttttggtccctgtaatatagtggacttttggttttagcccctctaatttattttttttagattccacccttgaaaaatgaag |
19298660 |
T |
|
| Q |
776 |
attatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||| || ||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||| |
|
|
| T |
19298661 |
attcttcaggattggcccctcaccccaatgagccagcagaatctcctacgtggcagtgacgtgtcaa |
19298727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 33890519 - 33890678
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||| |||| |||||||||| | || ||| ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
33890519 |
gttaatagtgtttttggcccctgtaatatagtgcgctttttgttttagtccctgtaatttattttttttagattccacccttgaaaaatgaagattcttc |
33890618 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
33890619 |
aggattgtcccgtcaccccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
33890678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 686 - 838
Target Start/End: Complemental strand, 33891663 - 33891509
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| ||||| || || | |
|
|
| T |
33891663 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaatttttttttttagattccacccttgaaaaatgaagtttcttca |
33891564 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtg |
838 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
33891563 |
ggattggcccctcaccccaatgtgtcagcagaatctcttacgtggcagtgacgtg |
33891509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 15553614 - 15553456
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatat-ata-tattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| | |||||||| ||||| |||||||||||| || | | ||| | ||||||||||||||||||| |||| |||||||| || | |
|
|
| T |
15553614 |
gttaatagtgtttttggctcctgtaatatggtgcatttttggttttagcccctgtaatatttttttttagattccacccttgaaaaatgaagattcttca |
15553515 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||| |||||||| |||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
15553514 |
ggattgacccctgaccccaatatgtcagcaaaatctcctacagggcagtgatgtgtcaa |
15553456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 12299973 - 12300132
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| | ||||||||||| | | | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
12299973 |
gttaatagtgtttttggcccctgtaatatagtgtacttttggttttaattcctgtaattttttttttttagattccacccttgaaaaatgaagattcttc |
12300072 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12300073 |
ataattggcccctcatcccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
12300132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 686 - 838
Target Start/End: Complemental strand, 19299816 - 19299662
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata---tattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||| | || |||||||||| ||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
19299816 |
gttaatagtgtttttagcccctgtaatatagagcacttttggttttagcccctgtaaaattttttttttagattccacccttgaaaaatgaagattcttc |
19299717 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtg |
838 |
Q |
| |
|
||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
19299716 |
aggattggcccc-caccccaatgagtcagcagaatctcctacgtggcagtgacgtg |
19299662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 750 - 842
Target Start/End: Complemental strand, 12301114 - 12301022
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||| |||| | |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
12301114 |
ttagattccacccttgaaaaataaagattcttcaggattgacccctcaccccaatgtgtcagcagaatctcctatgtggcagtgacttgtcaa |
12301022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 806
Target Start/End: Complemental strand, 5583897 - 5583837
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgt |
806 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| |||||||||| | ||||||||||||| |
|
|
| T |
5583897 |
ttttttagattccacccttgaaaaatgaagattctttaggattggtctctcaccccaatgt |
5583837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 736
Target Start/End: Original strand, 5583759 - 5583808
Alignment:
| Q |
687 |
ttaatagggtttttggtccatgtaatatagtgcaattttggttttagtcc |
736 |
Q |
| |
|
||||||| |||||||| | |||||||||||||| ||||||||||||||| |
|
|
| T |
5583759 |
ttaatagtgtttttggccgctgtaatatagtgcacttttggttttagtcc |
5583808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0497 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0497
Description:
Target: scaffold0497; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 1604 - 1446
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtcc--atatatatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||| |||||||||||||||| || || || | ||||||||||||||||||| |||| |||||||| || | |
|
|
| T |
1604 |
gttaatagtgtttttggcccctgtaatatagagcaattttggttttagcccctgtaaattttttttttagattccacccttgaaaaatgaagattcttca |
1505 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1504 |
ggattggcccctcaccccaatgagtcagcagaatctcctacgtggcagtgacgtgtcaa |
1446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0497; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 301 - 460
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || ||| |||||| ||| |||||||||||| || | || ||| |||||||||||||||||| |||| |||| ||| || |
|
|
| T |
301 |
gttaatagtgtttttggcccctgtgatatagagcacttttggttttagcccctgtaaattattatttttagattccacccttgaaaaatgaaaattcttc |
400 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||||||| |||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
401 |
aggattggcccctcaccccaatgagtcaccagaatctcctacgtggcagggacgtgtcaa |
460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0850 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0850
Description:
Target: scaffold0850; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 1453 - 1612
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || ||| ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
1453 |
gttaatagtgtttttggcccttgtaatatagtgcacttttggttttagcccctgtaaattattttttttagattccacccttgaaaaatgaagattcttc |
1552 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |||| |
|
|
| T |
1553 |
aggattgacccctcaccccaatgagtcagcagaatcttctacgtggcagtgacgtctcaa |
1612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0850; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 687 - 841
Target Start/End: Complemental strand, 4699 - 4542
Alignment:
| Q |
687 |
ttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatt---ttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||| |||| |||||||| || | |
|
|
| T |
4699 |
ttaatagtgtttttggcccttgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaattttagattccacccttgaaaaatgaagattcttca |
4600 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtca |
841 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
4599 |
ggattggcccctcaccccaatgagtcagcagaatctcctacgtggcagtgacgtgtca |
4542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 4e-37; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 22895400 - 22895558
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||| ||||| |||| |||||||| || | |
|
|
| T |
22895400 |
gttaatagtgtttttgacccctgtaatatagtgcacttttggttttagcccctgtaatttttttttttagattccccccttgaaaaatgaagattcttca |
22895499 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22895500 |
ggattgaccccttaccccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
22895558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 684 - 842
Target Start/End: Complemental strand, 4843555 - 4843394
Alignment:
| Q |
684 |
gtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattat |
780 |
Q |
| |
|
|||||||||| |||||||| | ||||||||| |||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| | |
|
|
| T |
4843555 |
gtgttaatagtgtttttggcctttgtaatataatgcacttttggttttagcccctgtaattttttttttttagattccacccttgaaaaatgaagattct |
4843456 |
T |
|
| Q |
781 |
ttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||| |
|
|
| T |
4843455 |
tcaggattgacccctcacctcaatgtgtcggcagaatctactacgtggcagtgacgtgtcaa |
4843394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 684 - 842
Target Start/End: Complemental strand, 4869250 - 4869089
Alignment:
| Q |
684 |
gtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattat |
780 |
Q |
| |
|
|||||||||| |||||||| | ||||||||| |||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| | |
|
|
| T |
4869250 |
gtgttaatagtgtttttggcctttgtaatataatgcacttttggttttagcccctgtaattttttttttttagattccacccttgaaaaatgaagattct |
4869151 |
T |
|
| Q |
781 |
ttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||| |
|
|
| T |
4869150 |
tcaggattgacccctcacctcaatgtgtcggcagaatctactacgtggcagtgacgtgtcaa |
4869089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 22896536 - 22896378
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata---tattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| |||||||||||| || | || | | ||||||| |||||||||||||||| |||||||| ||| |
|
|
| T |
22896536 |
gttaatagtgtttttgacccctgtaatatagtgcacttttggttttagcccctgtaaaattttttttttaaattccacccttaaaaaatgaagattcttt |
22896437 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||||||| ||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
22896436 |
aggattggcccctcaccccaatg-gtcagcaaaatcttctacgtggcagtgacgtgtcaa |
22896378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 686 - 829
Target Start/End: Original strand, 24842823 - 24842968
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata--tatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||||| || | |
|
|
| T |
24842823 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaatttttttttttagattccacccttgaaaaatgaagattcttca |
24842922 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggc |
829 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
24842923 |
ggattggcccctcaccccaatgactcagcagaatctcctacgtggc |
24842968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 54204348 - 54204505
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtcc--atatatatattttttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || ||| || | ||||||||||||||||||| |||| |||||||| || | |
|
|
| T |
54204348 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctataaattttttttttagattccacccttgaaaa-tgaagattcttca |
54204446 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
| |||| |||||||| |||||||| |||||||||| ||| ||||||||||||||||| |
|
|
| T |
54204447 |
gcattggcccctcacttcaatgtgtgagcagaatcttttacgtggcagtgacgtgtcaa |
54204505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 686 - 829
Target Start/End: Complemental strand, 24844241 - 24844095
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttttt---agattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| | | || || |||||| ||||||||||||| |||| |||||||| || |
|
|
| T |
24844241 |
gttaatagtgtttttggcccttgtaatatagtgcacttttggttttagcctctgtaaatttttttttttagattccacccttgaaaaatgaagattcttc |
24844142 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggc |
829 |
Q |
| |
|
|| ||||||||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
24844141 |
agaattgacccctcaccctaatgactcagcagaatctcctacgtggc |
24844095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 686 - 834
Target Start/End: Complemental strand, 16386646 - 16386496
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttt--ttagattccacccttaaaaagtgaagattattta |
783 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||| |||| |||||||| || | |
|
|
| T |
16386646 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaaattagattccacccttgaaaaatgaagattcttca |
16386547 |
T |
|
| Q |
784 |
ggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtga |
834 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
16386546 |
ggattggcccctcaccccaatgactcagcagaatctcctacgtggcagtga |
16386496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 746 - 842
Target Start/End: Original strand, 28556906 - 28557002
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| ||||||| |||| | |||||| || ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
28556906 |
ttttttagatttcacccttgaaaaataaagattcttcaggattggcccctcactacaatgtgtcggcagaatctcctacgtggcagtgacgtgtcaa |
28557002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 750 - 835
Target Start/End: Complemental strand, 15791918 - 15791833
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgac |
835 |
Q |
| |
|
||||||||||| |||||||| |||||||| |||||||||| |||| ||| || || |||||||||||| |||| |||||||||| |
|
|
| T |
15791918 |
ttagattccactcttaaaaaatgaagattctttaggattggcccccaacctcattgattcagcagaatcttctacgtggcagtgac |
15791833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 77; Significance: 3e-35; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 679 - 842
Target Start/End: Complemental strand, 52305405 - 52305239
Alignment:
| Q |
679 |
tttttgtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttttt---agattccacccttaaaaagtgaag |
775 |
Q |
| |
|
|||||| |||||||| ||||||| || |||||||||||||| |||||||||||| | | || || |||||| |||||||||||||||||| ||||| |
|
|
| T |
52305405 |
tttttgggttaatagtgtttttgacccctgtaatatagtgcacttttggttttagccgctgtaaatttttttttttagattccacccttaaaaaatgaag |
52305306 |
T |
|
| Q |
776 |
attatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||| || ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
52305305 |
attcttcaggattgacccttcaccccaatgtgtcagtagaatctcctacgtggcagtgacgcgtcaa |
52305239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 39404662 - 39404822
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata----tatattttttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
|||||||| |||||||| || |||||||| ||||| |||||||||||| || | || ||| ||||||||||||||| ||| |||| |||||||| || |
|
|
| T |
39404662 |
gttaatagtgtttttggcccctgtaatatggtgcacttttggttttagcccttgtaattttattttttttagattccactcttgaaaaatgaagattctt |
39404761 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39404762 |
caggattggcccctcaccccaatgtgtcagcagaatctcctatgtggcagtgacgtgtcaa |
39404822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 39406124 - 39406028
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| |||||||||||| |||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39406124 |
tttttttgattccacccttgaaaaatgaagattcttcaggattggcccctcaccccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
39406028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 38338283 - 38338187
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| ||||||||| || |||| |||||||| || ||||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
38338283 |
ttttttggattccacctttgaaaaatgaagattcttcaggattggcccctcatcccaatgtgtcagcagaatctcctacgtagcagtgacgtgtcaa |
38338187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 750 - 842
Target Start/End: Original strand, 52304332 - 52304424
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||||| |||| |||||||| || ||||||||||||||||| ||||| ||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
52304332 |
ttagattccacccttgaaaaatgaagattcttcaggattgacccctcacctaaatgtctcagcagaatctcatacgtggcaatgacgtgtcaa |
52304424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 686 - 841
Target Start/End: Original strand, 34021794 - 34021953
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata----tatattttttagattccacccttaaaaagtgaagattatt |
781 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| | ||||||||||| | | || ||| ||||||||||||||||||| |||| |||||||| || |
|
|
| T |
34021794 |
gttaatagtgtttttggcccctgtaatatagtgcactattggttttagttcctgtaattttattttttttagattccacccttgaaaaatgaagattctt |
34021893 |
T |
|
| Q |
782 |
taggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtca |
841 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
34021894 |
caggattgacccctcaccccaatgtgtcagtagaatctcctatgtggcagtgacatgtca |
34021953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 686 - 842
Target Start/End: Complemental strand, 34022857 - 34022702
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatattttttagattccacccttaaaaagtgaagattatttagg |
785 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| ||||||||||| | | || || |||||||||| ||||||| |||| |||||||| || ||| |
|
|
| T |
34022857 |
gttaatagtgtttttgcccc-tgtaatatagtgcacttttggttttaactcctgtaaattatttttagatttcacccttgaaaaatgaagattcttcagg |
34022759 |
T |
|
| Q |
786 |
attgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
34022758 |
attggccccacaccccaatgtgtccgcagaatatcctacgtggcagtgacgtgtcaa |
34022702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 1756057 - 1756216
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatata--tat-tttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||| ||| || |||||||| ||||| ||| |||||||| || | || | ||| |||||||||||||||||| |||| |||||||| || |
|
|
| T |
1756057 |
gttaatagtgtttctggcccctgtaatatggtgcactttcggttttagcccctgtaaaattatctttttagattccacccttgaaaaatgaagattcttc |
1756156 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
1756157 |
cggattggcccctgacctcaatgtgtcagtagaatctcctacgtggcagtgatgtgtcaa |
1756216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 686 - 842
Target Start/End: Original strand, 51433 - 51590
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata-tatattttttagattccacccttaaaaagtgaagattatttag |
784 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| ||||| |||||| || | || | | ||||||||||||||||||| |||| |||||||| || || |
|
|
| T |
51433 |
gttaatagtgtttttggcccctgtaatatagtgcacttttgattttagcccctgtaattttttttttagattccacccttgaaaaatgaagattcttcag |
51532 |
T |
|
| Q |
785 |
gattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
51533 |
gattggcctatcaccccaatgtgtcagcataatctcctacgtggcagtgacgtgtcaa |
51590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 783 - 842
Target Start/End: Complemental strand, 52550 - 52491
Alignment:
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
52550 |
aggattggcccctcactccaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
52491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 686 - 839
Target Start/End: Original strand, 14401328 - 14401484
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| | |||||| || |||||||||||| | |||||||||||| || | || | | |||||| |||||||||||| |||| |||||||| || |
|
|
| T |
14401328 |
gttaatagtgattttggcccctgtaatatagtgaacttttggttttagcccttgtaattttttttttttggattccacccttgaaaaatgaagattcttc |
14401427 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgt |
839 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14401428 |
aggattggccccacaccccaatgtgtcagcagaatctcctacgtggcagtgacgtgt |
14401484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 746 - 837
Target Start/End: Complemental strand, 2668928 - 2668837
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgt |
837 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| || || ||| |||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2668928 |
ttttttagattccacccttgaaaaatgaagattcttcagtattagcccctctccccaatgtgtcagcagaatctcctacgtggcagtgacgt |
2668837 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 745 - 842
Target Start/End: Original strand, 2667862 - 2667959
Alignment:
| Q |
745 |
attttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||||| ||| || |||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
2667862 |
attttttagattcaacctttgaaaaacgaagattcttcaggattgacccctcacctcaatgtgtcagcagaatctcctatgtaacagtgacgtgtcaa |
2667959 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1147 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold1147
Description:
Target: scaffold1147; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 680 - 823
Target Start/End: Original strand, 2456 - 2602
Alignment:
| Q |
680 |
ttttgtgttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatata---tatattttttagattccacccttaaaaagtgaaga |
776 |
Q |
| |
|
||||| |||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||||||| |||| |||||| |
|
|
| T |
2456 |
ttttgggttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaatttttttttttagattccacccttgaaaaatgaaga |
2555 |
T |
|
| Q |
777 |
ttatttaggattgacccctcaccccaatgtgtcagcagaatctccta |
823 |
Q |
| |
|
|| || ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2556 |
ttcttcaggattggcccctcaccccaatgactcagcagaatctccta |
2602 |
T |
|
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Target: scaffold0048 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 747 - 842
Target Start/End: Complemental strand, 50123 - 50028
Alignment:
| Q |
747 |
tttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| |||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
50123 |
tttttagattccacccttgaaaaatgaagattctttaggattggcccctgacctcaatgtgtcagcagaatctcctacgtggcagtgacgtatcaa |
50028 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 750 - 842
Target Start/End: Original strand, 49005 - 49097
Alignment:
| Q |
750 |
ttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||||||| ||| |||| |||||||| || |||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
49005 |
ttagattccacacttgaaaaatgaagattcttccggattggcccctgacctcaatgtgtcagcagaatctcctacgtggcagtgacgtgtcaa |
49097 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1571 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold1571
Description:
Target: scaffold1571; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 746 - 842
Target Start/End: Complemental strand, 1286 - 1190
Alignment:
| Q |
746 |
ttttttagattccacccttaaaaagtgaagattatttaggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtgacgtgtcaa |
842 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||| || ||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1286 |
ttttttaaattccacccttgaaaaatgaagattcttcaggattggcccctcacctcaatgagtcagcagaatctcctatgtggcagtgacgtgtcaa |
1190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1571; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 686 - 834
Target Start/End: Original strand, 47 - 198
Alignment:
| Q |
686 |
gttaatagggtttttggtccatgtaatatagtgcaattttggttttagtccatatatatatttt---ttagattccacccttaaaaagtgaagattattt |
782 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| |||||||||||| || | || | | ||||||||||||||| |||| |||||||| || |
|
|
| T |
47 |
gttaatagtgtttttggcccctgtaatatagtgcacttttggttttagcccctgtaaaaaaaaaaaattagattccacccttgaaaaatgaagattcttc |
146 |
T |
|
| Q |
783 |
aggattgacccctcaccccaatgtgtcagcagaatctcctacatggcagtga |
834 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
147 |
aggattggcccctcaccccaatgactcagcagaatctcctacgtggcagtga |
198 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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