View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16931_high_3 (Length: 673)

Name: NF16931_high_3
Description: NF16931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16931_high_3
NF16931_high_3
[»] chr1 (45 HSPs)
chr1 (232-434)||(17977417-17977619)
chr1 (233-434)||(17976761-17976964)
chr1 (234-434)||(27816578-27816778)
chr1 (232-434)||(27815440-27815642)
chr1 (231-292)||(27264216-27264277)
chr1 (232-292)||(37395632-37395692)
chr1 (231-292)||(35721099-35721160)
chr1 (232-292)||(9774888-9774948)
chr1 (337-428)||(13074224-13074315)
chr1 (233-292)||(20722472-20722531)
chr1 (231-292)||(34934747-34934808)
chr1 (232-292)||(20723688-20723748)
chr1 (232-292)||(26863859-26863919)
chr1 (232-292)||(27262907-27262967)
chr1 (232-292)||(35911888-35911948)
chr1 (337-424)||(48857052-48857140)
chr1 (233-292)||(11711254-11711312)
chr1 (233-292)||(37396840-37396899)
chr1 (233-292)||(46075050-46075109)
chr1 (231-292)||(35722285-35722346)
chr1 (231-292)||(35910651-35910711)
chr1 (231-292)||(39163024-39163085)
chr1 (231-292)||(46073883-46073944)
chr1 (232-292)||(47038865-47038925)
chr1 (233-292)||(23469969-23470028)
chr1 (233-292)||(24609919-24609978)
chr1 (238-292)||(9774042-9774096)
chr1 (232-282)||(45979506-45979556)
chr1 (231-292)||(30724015-30724076)
chr1 (231-288)||(48334136-48334193)
chr1 (233-292)||(24427369-24427428)
chr1 (233-292)||(26865184-26865243)
chr1 (232-291)||(50164402-50164461)
chr1 (238-288)||(51240124-51240174)
chr1 (231-288)||(16026883-16026940)
chr1 (231-264)||(26324583-26324616)
chr1 (231-264)||(30323262-30323295)
chr1 (231-264)||(35056863-35056896)
chr1 (232-288)||(10631473-10631529)
chr1 (232-292)||(11710552-11710612)
chr1 (232-292)||(24611117-24611177)
chr1 (232-288)||(33234545-33234601)
chr1 (232-288)||(48588965-48589021)
chr1 (232-288)||(48594052-48594108)
chr1 (232-288)||(48598663-48598719)
[»] chr4 (40 HSPs)
chr4 (232-434)||(17326592-17326794)
chr4 (337-434)||(17321045-17321143)
chr4 (230-292)||(45618282-45618344)
chr4 (337-428)||(16574232-16574324)
chr4 (233-292)||(22204055-22204114)
chr4 (233-292)||(42359346-42359405)
chr4 (238-292)||(17371845-17371899)
chr4 (238-284)||(35054667-35054713)
chr4 (231-285)||(41933816-41933870)
chr4 (231-292)||(3879084-3879145)
chr4 (231-292)||(19674412-19674473)
chr4 (231-292)||(54121700-54121761)
chr4 (232-292)||(3880496-3880556)
chr4 (232-292)||(17281570-17281630)
chr4 (232-292)||(17370072-17370132)
chr4 (232-292)||(33137228-33137288)
chr4 (337-428)||(44705407-44705499)
chr4 (377-428)||(34660643-34660694)
chr4 (233-287)||(32699319-32699373)
chr4 (231-292)||(45619731-45619792)
chr4 (252-292)||(40198593-40198633)
chr4 (232-291)||(16573377-16573436)
chr4 (233-288)||(19675624-19675679)
chr4 (233-280)||(32697999-32698046)
chr4 (233-292)||(44705299-44705358)
chr4 (231-289)||(4211559-4211617)
chr4 (238-292)||(16574368-16574422)
chr4 (238-284)||(41935078-41935124)
chr4 (231-292)||(123532-123593)
chr4 (231-292)||(9289580-9289641)
chr4 (231-288)||(12152438-12152495)
chr4 (231-288)||(14487800-14487857)
chr4 (231-288)||(14488132-14488189)
chr4 (231-264)||(20291984-20292017)
chr4 (231-264)||(42823774-42823807)
chr4 (232-292)||(6827815-6827875)
chr4 (232-292)||(29059712-29059772)
chr4 (232-288)||(34659705-34659761)
chr4 (232-292)||(42358031-42358091)
chr4 (232-292)||(55542579-55542639)
[»] chr2 (31 HSPs)
chr2 (337-431)||(20245166-20245261)
chr2 (337-428)||(25283136-25283228)
chr2 (232-292)||(25979251-25979311)
chr2 (337-428)||(29794178-29794270)
chr2 (231-285)||(19603736-19603790)
chr2 (231-292)||(2412428-2412489)
chr2 (231-292)||(25977868-25977929)
chr2 (232-292)||(1777468-1777528)
chr2 (233-292)||(19604919-19604978)
chr2 (238-292)||(4040216-4040270)
chr2 (232-292)||(8809595-8809656)
chr2 (233-292)||(1778790-1778849)
chr2 (233-292)||(25283272-25283331)
chr2 (246-292)||(36837778-36837824)
chr2 (231-292)||(23861750-23861811)
chr2 (231-288)||(29794321-29794377)
chr2 (231-288)||(30215816-30215873)
chr2 (233-292)||(11087049-11087108)
chr2 (233-292)||(11088680-11088739)
chr2 (238-292)||(8810703-8810757)
chr2 (230-288)||(10671627-10671685)
chr2 (254-292)||(20245305-20245343)
chr2 (238-292)||(43824168-43824222)
chr2 (232-285)||(3172019-3172072)
chr2 (231-288)||(7814682-7814739)
chr2 (238-287)||(12067002-12067051)
chr2 (238-279)||(24754171-24754212)
chr2 (232-288)||(16673410-16673466)
chr2 (232-292)||(30843643-30843703)
chr2 (232-264)||(40125258-40125290)
chr2 (232-264)||(43672287-43672319)
[»] chr3 (40 HSPs)
chr3 (231-434)||(47433671-47433870)
chr3 (231-292)||(39820604-39820665)
chr3 (231-292)||(52403124-52403185)
chr3 (231-292)||(54437467-54437528)
chr3 (337-428)||(976883-976975)
chr3 (232-292)||(40477374-40477434)
chr3 (232-292)||(52401016-52401076)
chr3 (232-292)||(53121301-53121361)
chr3 (233-292)||(46104343-46104402)
chr3 (233-292)||(52708617-52708676)
chr3 (238-292)||(20488371-20488425)
chr3 (238-292)||(22508740-22508794)
chr3 (231-292)||(46026074-46026135)
chr3 (246-292)||(11914833-11914879)
chr3 (238-292)||(20489358-20489412)
chr3 (238-292)||(45267310-45267364)
chr3 (238-288)||(52707541-52707591)
chr3 (231-292)||(976778-976839)
chr3 (231-288)||(20585648-20585705)
chr3 (231-284)||(42446524-42446577)
chr3 (231-292)||(45268570-45268631)
chr3 (232-292)||(3416494-3416554)
chr3 (353-428)||(20488483-20488559)
chr3 (232-268)||(44507823-44507859)
chr3 (232-292)||(46027417-46027477)
chr3 (233-292)||(977846-977905)
chr3 (233-292)||(4705681-4705740)
chr3 (233-292)||(9855178-9855237)
chr3 (233-292)||(43641143-43641202)
chr3 (238-292)||(32637188-32637242)
chr3 (238-292)||(39819317-39819371)
chr3 (238-284)||(40476226-40476272)
chr3 (238-288)||(40545784-40545834)
chr3 (231-288)||(30106165-30106222)
chr3 (232-288)||(19844526-19844582)
chr3 (232-264)||(32119553-32119585)
chr3 (232-292)||(32635593-32635653)
chr3 (232-264)||(35177254-35177286)
chr3 (232-264)||(38232240-38232272)
chr3 (232-264)||(47114486-47114518)
[»] chr7 (32 HSPs)
chr7 (239-434)||(43869770-43869965)
chr7 (238-292)||(32544774-32544828)
chr7 (231-292)||(31848144-31848205)
chr7 (231-292)||(32197909-32197970)
chr7 (238-292)||(12385707-12385761)
chr7 (231-292)||(5611507-5611568)
chr7 (231-292)||(24197103-24197164)
chr7 (232-292)||(13418949-13419009)
chr7 (232-292)||(24195606-24195666)
chr7 (232-292)||(41693644-41693704)
chr7 (238-288)||(32196689-32196739)
chr7 (231-292)||(17066423-17066484)
chr7 (232-292)||(35212067-35212127)
chr7 (232-286)||(554244-554298)
chr7 (238-292)||(11217071-11217125)
chr7 (238-292)||(38742186-38742240)
chr7 (231-292)||(12933417-12933478)
chr7 (337-428)||(28462492-28462585)
chr7 (231-292)||(40576764-40576825)
chr7 (231-292)||(41694955-41695016)
chr7 (232-292)||(42254957-42255017)
chr7 (238-285)||(31489942-31489989)
chr7 (238-292)||(5610161-5610215)
chr7 (238-292)||(28462628-28462682)
chr7 (238-292)||(31846991-31847045)
chr7 (231-292)||(25046240-25046301)
chr7 (231-288)||(29198301-29198358)
chr7 (231-288)||(41054181-41054238)
chr7 (236-292)||(25037753-25037809)
chr7 (232-264)||(36687232-36687264)
chr7 (231-283)||(39619800-39619852)
chr7 (232-288)||(44568325-44568381)
[»] chr8 (44 HSPs)
chr8 (231-292)||(1376933-1376994)
chr8 (231-292)||(1385555-1385616)
chr8 (231-292)||(10717119-10717180)
chr8 (231-292)||(10718448-10718509)
chr8 (232-292)||(22272270-22272330)
chr8 (238-292)||(4182627-4182681)
chr8 (238-292)||(28996839-28996893)
chr8 (231-292)||(38456730-38456791)
chr8 (231-292)||(38658479-38658540)
chr8 (232-292)||(22534722-22534782)
chr8 (232-292)||(36588221-36588281)
chr8 (233-292)||(4183979-4184038)
chr8 (233-292)||(28997993-28998052)
chr8 (231-290)||(45517962-45518021)
chr8 (337-426)||(296986-297076)
chr8 (238-292)||(34904509-34904563)
chr8 (231-292)||(22270941-22271002)
chr8 (232-292)||(22533316-22533376)
chr8 (337-428)||(30123254-30123346)
chr8 (233-292)||(3030396-3030455)
chr8 (233-292)||(3031543-3031602)
chr8 (238-288)||(3483638-3483688)
chr8 (232-281)||(10292815-10292864)
chr8 (231-292)||(30124223-30124284)
chr8 (231-288)||(41847184-41847241)
chr8 (232-292)||(14197824-14197884)
chr8 (232-292)||(36589387-36589447)
chr8 (232-292)||(39439923-39439983)
chr8 (233-288)||(1420446-1420501)
chr8 (232-287)||(27117922-27117977)
chr8 (337-422)||(28875315-28875401)
chr8 (238-292)||(38455452-38455506)
chr8 (238-292)||(45516402-45516456)
chr8 (231-292)||(1526113-1526174)
chr8 (231-264)||(5357421-5357454)
chr8 (231-288)||(17073805-17073862)
chr8 (231-288)||(17574408-17574465)
chr8 (232-264)||(2728231-2728263)
chr8 (232-288)||(3680746-3680802)
chr8 (232-288)||(20984145-20984201)
chr8 (232-264)||(28497254-28497286)
chr8 (232-280)||(30123151-30123199)
chr8 (232-288)||(36623351-36623407)
chr8 (232-264)||(44997930-44997962)
[»] scaffold0517 (2 HSPs)
scaffold0517 (232-292)||(11522-11582)
scaffold0517 (233-292)||(10315-10374)
[»] scaffold0002 (4 HSPs)
scaffold0002 (231-428)||(345762-345958)
scaffold0002 (231-292)||(344935-344996)
scaffold0002 (233-292)||(374335-374394)
scaffold0002 (231-280)||(376381-376430)
[»] chr6 (23 HSPs)
chr6 (231-292)||(21953204-21953265)
chr6 (337-428)||(33131856-33131948)
chr6 (233-292)||(18810532-18810591)
chr6 (233-292)||(20897497-20897556)
chr6 (230-292)||(34998141-34998203)
chr6 (232-292)||(16995450-16995510)
chr6 (337-428)||(25439750-25439842)
chr6 (233-292)||(21165246-21165305)
chr6 (238-292)||(20391219-20391273)
chr6 (231-292)||(3276365-3276426)
chr6 (231-292)||(17517309-17517370)
chr6 (231-292)||(34995112-34995173)
chr6 (233-292)||(1972400-1972459)
chr6 (233-292)||(20393268-20393327)
chr6 (232-292)||(26421843-26421903)
chr6 (232-288)||(29291358-29291414)
chr6 (233-288)||(1974156-1974211)
chr6 (238-288)||(17516167-17516217)
chr6 (238-280)||(20895963-20896005)
chr6 (231-264)||(19129489-19129522)
chr6 (232-292)||(777676-777736)
chr6 (232-264)||(17765344-17765376)
chr6 (232-288)||(21385529-21385585)
[»] chr5 (18 HSPs)
chr5 (232-292)||(3936577-3936637)
chr5 (232-292)||(27571129-27571189)
chr5 (231-292)||(3954050-3954111)
chr5 (231-292)||(31540494-31540555)
chr5 (1-71)||(35365834-35365904)
chr5 (231-292)||(4565391-4565452)
chr5 (232-292)||(34911828-34911888)
chr5 (231-286)||(15599763-15599818)
chr5 (337-427)||(27098232-27098323)
chr5 (231-292)||(3938060-3938121)
chr5 (232-288)||(18258161-18258217)
chr5 (238-286)||(27570061-27570109)
chr5 (233-292)||(31541622-31541681)
chr5 (92-138)||(35433804-35433851)
chr5 (238-292)||(6244382-6244436)
chr5 (231-292)||(4777638-4777699)
chr5 (238-287)||(14809168-14809217)
chr5 (232-288)||(24443379-24443435)
[»] scaffold0230 (1 HSPs)
scaffold0230 (233-292)||(431-490)
[»] scaffold0001 (2 HSPs)
scaffold0001 (233-292)||(119593-119652)
scaffold0001 (233-292)||(120985-121044)
[»] scaffold0106 (2 HSPs)
scaffold0106 (231-292)||(30907-30968)
scaffold0106 (231-292)||(29727-29788)
[»] scaffold0562 (1 HSPs)
scaffold0562 (231-292)||(9920-9981)
[»] scaffold0765 (1 HSPs)
scaffold0765 (238-292)||(1865-1919)
[»] scaffold0599 (1 HSPs)
scaffold0599 (246-292)||(6584-6630)
[»] scaffold0009 (1 HSPs)
scaffold0009 (232-292)||(202578-202638)
[»] scaffold0119 (1 HSPs)
scaffold0119 (233-288)||(16724-16779)
[»] scaffold0373 (1 HSPs)
scaffold0373 (232-292)||(8546-8606)


Alignment Details
Target: chr1 (Bit Score: 96; Significance: 1e-46; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 232 - 434
Target Start/End: Complemental strand, 17977619 - 17977417
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnnn 331  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||            |||||||||||||||||||            
T  17977619 aggcttaaatatggttttggtccctgcaaatatagcgaatttgggttttggtccttggtaaaaaaaaaattt-gaaatcaatccctgcaaaattttttgt 17977521  T
Q  332 nnnnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatg 430  Q
         |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17977520 tttttaaaaaggtccttggccccactttcttgtctatgtgtctgatttttgcatatgtgtcacctgctgactgtttcattttgcacatgtggcagccatg 17977421  T
Q  431 tcat 434  Q
    ||||    
T  17977420 tcat 17977417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 233 - 434
Target Start/End: Original strand, 17976761 - 17976964
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnn-gaaatcaatccctgcaaaannnnnnnn 331  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||             |||||||||||||||||||            
T  17976761 ggcttaaatatggttttggttcctgcaaatatagcgaatttgggttttggtccctggtaaaaaaaaaaaatttgaaatcaatccctgcaaaattttttgt 17976860  T
Q  332 nnnnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatg 430  Q
         |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  17976861 tttttaaaaaggtccttggccccactttcttatctatgtgtctgatttttgcatatgtgtcacctgctgactgtttcattttgcacaagtggcagccatg 17976960  T
Q  431 tcat 434  Q
    ||||    
T  17976961 tcat 17976964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 234 - 434
Target Start/End: Complemental strand, 27816778 - 27816578
Alignment:
Q  234 gcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnnnnn 333  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||            |||||||||||||||||||              
T  27816778 gcttaaatatggttttggtccctgcaaatatagccaatttgggttttggtccctggtaaaaaaaaatttt-gaaatcaatccctgcaaaattttttgttt 27816680  T
Q  334 nnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatgtc 432  Q
       |||||||||||| |||||||||||||| ||||||||| |||||| || || ||||||| |||||||||||| | |||||| ||||||||||||||||    
T  27816679 tttaaaaaggtccttcgccccactttcttgcctatgtgtcagatttttgcttacgtgtcacgtgctgactgttcaaatttgcatatgtggcagccatgtc 27816580  T
Q  433 at 434  Q
    ||    
T  27816579 at 27816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 232 - 434
Target Start/End: Original strand, 27815440 - 27815642
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnnn 331  Q
    ||||||||||||| || |||||||||||||||||||  |||||||||||||||||||||||            |||||||||||||||||||            
T  27815440 aggcttaaatatggttctggtccctgcaaatatagccaatttgggttttggtccctggtaaaaaaaaatttt-gaaatcaatccctgcaaaattttttgt 27815538  T
Q  332 nnnnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatg 430  Q
         |||||||||||| |||||||||||||| ||||||||| |||||| || || ||||||| |||||||||||| | |||||| ||||||||||||||    
T  27815539 tttttaaaaaggtccttcgccccactttcttgcctatgtgtcagatttttgcttacgtgtcacgtgctgactgttcaaatttgcatatgtggcagccatg 27815638  T
Q  431 tcat 434  Q
    ||||    
T  27815639 tcat 27815642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 27264277 - 27264216
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27264277 taggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 27264216  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 37395632 - 37395692
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  37395632 aggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggtaa 37395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 35721099 - 35721160
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  35721099 taggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggtaa 35721160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 9774948 - 9774888
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  9774948 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 9774888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 13074224 - 13074315
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||||||||| | ||||||||| ||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||    
T  13074224 aaaaaggtccttaggcccactttctttt-tatgtgtcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgtggcagcca 13074315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 20722472 - 20722531
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| |||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20722472 ggctaaaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccctggtaa 20722531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 34934808 - 34934747
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||    
T  34934808 taggctaaaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggtaa 34934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 20723748 - 20723688
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  20723748 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccctggtaa 20723688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 26863859 - 26863919
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||| || ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26863859 aggctaaaatgtgtttttggtccctgcaaatatagcgaatttgagttttggtccctggtaa 26863919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 27262907 - 27262967
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  |||| |||||||||||||||||    
T  27262907 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaa 27262967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 35911948 - 35911888
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  35911948 aggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggtaa 35911888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 48857140 - 48857052
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggca 424  Q
    |||||||||||| | ||||||||||||  ||||| ||| ||||| ||||| |||||||||||||||||||  ||| |||||||||||||    
T  48857140 aaaaaggtccttaggcccactttcttgcttatgtatcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgtggca 48857052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 11711312 - 11711254
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  11711312 ggctaaaatatgtttttggtccctgcaaatatagcgaatttggg-tttggtccctggtaa 11711254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 37396899 - 37396840
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  37396899 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaa 37396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 46075109 - 46075050
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  46075109 ggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 46075050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 35722346 - 35722285
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||| |||||||||| |||||| |||||||| |||||||    
T  35722346 taggctaaaatatgtttttggtccctgtaaatatagcgaatttggattttggtctctggtaa 35722285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 35910651 - 35910711
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||    
T  35910651 taggctaaaatatgattttggtcc-tgcaaatatagcatatttcggttttggtccctggtaa 35910711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 39163085 - 39163024
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||| |||   |||||||||||||||||||||    
T  39163085 taggctaaaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccctggtaa 39163024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 46073883 - 46073944
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  46073883 taggctaaaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccctggtaa 46073944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 47038865 - 47038925
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||| |||||||||||||||||   ||||||||||||||||||||||    
T  47038865 aggctaaaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggtaa 47038925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 23470028 - 23469969
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  ||| ||||||| ||||||||||    
T  23470028 ggctaaaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccctggtaa 23469969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 24609919 - 24609978
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||| |||  ||||||||||||||||| ||||    
T  24609919 ggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctagtaa 24609978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 9774042 - 9774096
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||||||||||| ||  |||| |||||||||||||||||    
T  9774042 aaatatgtttttggtccctgcaaatataacgagtttgagttttggtccctggtaa 9774096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 45979556 - 45979506
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttgg 282  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||| |||||||    
T  45979556 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 30724076 - 30724015
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| ||||||||||||||| |  ||||| |||||||||||||||||    
T  30724076 taggctaaaatatgcttttcgtccctgcaaatataacaaatttgagttttggtccctggtaa 30724015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 48334193 - 48334136
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||    
T  48334193 taggctaaaatatgcttttggtccctacaaatatagcgaatttgagttttggttcctg 48334136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 24427428 - 24427369
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||| |||||||||||  |||| ||||| |||||||||||    
T  24427428 ggctaaaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggtaa 24427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 26865243 - 26865184
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||  |||||||| |||||||||||||| |||||| |||| |||||||||||    
T  26865243 ggctaaaatatatttttggtctctgcaaatatagcgaatttggattttagtccctggtaa 26865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 50164402 - 50164461
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggta 291  Q
    ||||| ||||||| ||||||||||||||||||| |||  |||| |||||||||| |||||    
T  50164402 aggctaaaatatgcttttggtccctgcaaatatggcgagtttgagttttggtccttggta 50164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 51240124 - 51240174
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| |||||||| |||||||||||||| |||||| ||||| ||||||    
T  51240124 aaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctg 51240174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 16026940 - 16026883
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  16026940 taggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 16026883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 26324583 - 26324616
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  26324583 taggctaaaatatgattttggtccctgcaaatat 26324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 30323295 - 30323262
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  30323295 taggctaaaatatgattttggtccctgcaaatat 30323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 35056896 - 35056863
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  35056896 taggctaaaatatgattttggtccctgcaaatat 35056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 10631529 - 10631473
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| ||||||||||||||||||| || | ||| |||||| |||||||    
T  10631529 aggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 10631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 11710552 - 11710612
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||| |||||| ||||||| ||   |||||||||||||||||||||    
T  11710552 aggctaaaatatgtttttgatccctgtaaatataacgaggttgggttttggtccctggtaa 11710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 24611177 - 24611117
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||| ||||||  ||  |||| |||||||||||||||||    
T  24611177 aggctaaaatatgtttttggtccctgtaaatatgacgagtttgagttttggtccctggtaa 24611117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 33234545 - 33234601
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  33234545 aggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 33234601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48589021 - 48588965
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||| |||||| | |  ||||||||||||||||||    
T  48589021 aggctaaaatatgtttttggtccctgtaaatatggtgagtttgggttttggtccctg 48588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48594108 - 48594052
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||| |||||| |||  ||||||||||| ||||||    
T  48594108 aggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48598719 - 48598663
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||| |||||| |||  ||||||||||| ||||||    
T  48598719 aggctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48598663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 232 - 434
Target Start/End: Complemental strand, 17326794 - 17326592
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnnn 331  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||            ||||||||||||||||||             
T  17326794 aggcttaaatatggttttggtccctccaaatatagggcatttgggttttggtccctagtaaaaatttttttt-gaaatcaatccctgcaaatttttttgt 17326696  T
Q  332 nnnnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatg 430  Q
         |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17326695 tttttaaaaaggtccttggccccactttcttgtctatgtgtctgatttttgcatatgtgtcacctgctgactgttccattttgcacatgtggcagccatg 17326596  T
Q  431 tcat 434  Q
    ||||    
T  17326595 tcat 17326592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 17321045 - 17321143
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatgtcat 434  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  17321045 aaaaagatccttggccccactttcttgtctatgtgtctgatttttgcatatgtgtcacctgctaactgttccattttgcacatgtggcagccatgtcat 17321143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 45618282 - 45618344
Alignment:
Q  230 gtaggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| | ||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  45618282 gtaggctaatatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 45618344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 16574324 - 16574232
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||||||||||  |||||||||  |||| ||||| |||||||||||||| ||||  ||| |||||||||||||||||    
T  16574324 aaaaaggtccttaggcccactttcttgcttatgtgtcttctttttgcataggtgtcacttgctgattgtttaattgtgcacatgtggcagcca 16574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 22204055 - 22204114
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||    
T  22204055 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 22204114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 42359405 - 42359346
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  42359405 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctggtaa 42359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 17371899 - 17371845
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||| |||||||||||||| || |||||||||||||||||||||||    
T  17371899 aaatatgcttttgatccctgcaaatataacgaatttgggttttggtccctggtaa 17371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 35054667 - 35054713
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtc 284  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||    
T  35054667 aaatatgattttagtccctgcaaatatagcgaatttgggttttggtc 35054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 41933816 - 41933870
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtcc 285  Q
    |||||| |||||||||||||||| ||||||||||||||  |||||||||||||||    
T  41933816 taggctaaaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 3879084 - 3879145
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| |||||||||||||||||  ||||| ||||||||||||||||    
T  3879084 taggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaa 3879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 19674412 - 19674473
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||| |||||||||||||  |||| |||||||||||||||||    
T  19674412 taggctaaaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggtaa 19674473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 54121761 - 54121700
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||||||||| ||||||||||||  |||  ||||||||||||||||||||||    
T  54121761 taggctaaaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggtaa 54121700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 3880556 - 3880496
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||| ||||    
T  3880556 aggctaaaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccctagtaa 3880496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 17281570 - 17281630
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||| || |||| |||||||||||||||||| |||||| ||||||||||||||||    
T  17281570 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaa 17281630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 17370072 - 17370132
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||| || |||| |||||||||||||||||| |||||| ||||||||||||||||    
T  17370072 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaa 17370132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 33137288 - 33137228
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||| |||||||||||||||||  |||||||||| |||||||||||    
T  33137288 aggctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccctggtaa 33137228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 44705407 - 44705499
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgattttg-catatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||| ||||||||  ||||||||| |||||  |||| || ||||||||||||||||  ||| |||||||||||||||||    
T  44705407 aaaaaggtccttagacccgctttcttgcttatgtgtcttatttttacataggtatcacttgctgactgtttaattatgcacatgtggcagcca 44705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 34660694 - 34660643
Alignment:
Q  377 ttttgcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||||||||||||||||||||  ||| ||| |||||||||||||    
T  34660694 ttttgcatatgtgtcacttgctgactgtttaattatgctcatgtggcagcca 34660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 32699373 - 32699319
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccct 287  Q
    |||| ||||||| |||||||||||| ||||||||||  |||||||||||||||||    
T  32699373 ggctaaaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccct 32699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 45619792 - 45619731
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| ||||||||||||||||||  ||| ||||||| ||||||||||    
T  45619792 taggctaaaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccctggtaa 45619731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 40198593 - 40198633
Alignment:
Q  252 tccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  40198593 tccctgcaaatatagcgagtttgggttttggtccctggtaa 40198633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 16573377 - 16573436
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggta 291  Q
    ||||| ||||||| |||||||| || ||||||| ||| ||||||||||||||| ||||||    
T  16573377 aggctaaaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggta 16573436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 19675679 - 19675624
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||| ||||||| |||||||||||||||||||| ||  ||||| ||||||||||||    
T  19675679 ggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccctg 19675624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 32697999 - 32698046
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggtttt 280  Q
    |||| ||||||||||||| ||||||||||||||||| |||| ||||||    
T  32697999 ggctaaaatatgattttgatccctgcaaatatagcgaatttaggtttt 32698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 44705299 - 44705358
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||| |||||||||||| | |||||||||||||| ||| ||||    
T  44705299 ggctaaaatatgtttttggtctctgcaaatatagtgaatttgggttttggttcctagtaa 44705358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 4211559 - 4211617
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctgg 289  Q
    |||||| ||||||| |||||||||||||||||||  | | ||| |||||||||||||||    
T  4211559 taggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctgg 4211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 16574422 - 16574368
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||| |||||||||||||||||| ||||  |||||||||||| ||||    
T  16574422 aaatatgtttttagtccctgcaaatatagcgaatttaagttttggtcccttgtaa 16574368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 41935124 - 41935078
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtc 284  Q
    ||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  41935124 aaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 123532 - 123593
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| ||||||||||||||  | ||||| |||||| |||||||||||    
T  123532 taggctaaaatatggttttagtccctgcaaatatgcctcattttggttttagtccctggtaa 123593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 9289641 - 9289580
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||| |||| ||||||||||||||  | | ||| |||||| |||||||||||    
T  9289641 taggcttaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctggtaa 9289580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 12152495 - 12152438
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | | ||| ||||||||||||||    
T  12152495 taggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttggtccctg 12152438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 14487800 - 14487857
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | | ||| ||||||||||||||    
T  14487800 taggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 14487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 14488189 - 14488132
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  14488189 taggctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctg 14488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 20291984 - 20292017
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  20291984 taggctaaaatatgattttggtccctgcaaatat 20292017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 42823774 - 42823807
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  42823774 taggctaaaatatgattttggtccctgcaaatat 42823807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 6827875 - 6827815
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||| ||||||||||||||  | | ||| |||||| |||||||||||    
T  6827875 aggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtccctggtaa 6827815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 29059712 - 29059772
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||| ||||||||||||||| || ||||| |||  ||||||||||||    
T  29059712 aggctaaaatatgtttttcgtccctgcaaatataacgaatttgagttccggtccctggtaa 29059772  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 34659705 - 34659761
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| ||||||||||||||||||| |||  ||  ||||||||||||||    
T  34659705 aggctaaaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 42358031 - 42358091
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||    |||| |||||| ||||||||||    
T  42358031 aggctaaaatatgtttttggtccctgcaaatataggaagtttgagttttgatccctggtaa 42358091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 55542639 - 55542579
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||| || ||||| ||||||||||||||||   |||||| |||||||||||||||    
T  55542639 aggctaaaatctgtttttgatccctgcaaatatagcatgtttgggatttggtccctggtaa 55542579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 8e-35; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 337 - 431
Target Start/End: Complemental strand, 20245261 - 20245166
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctga-ttttgcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatgt 431  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  20245261 aaaaaggtccttggccccactttcttgtctatgtgtctgatttttgcatatgtgtcacctgctgactgttcaattttgctcatgtggcagccatgt 20245166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 25283228 - 25283136
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||||||||||  ||||||||| ||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||    
T  25283228 aaaaaggtccttaggcccactttcttgcttatgtgtcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgtggcagcca 25283136  T

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Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 25979311 - 25979251
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25979311 aggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctggtaa 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 29794270 - 29794178
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||||||||||  ||||||||| ||||| |||||  ||||||||||||||||||  ||| |||||||||||||||||    
T  29794270 aaaaaggtccttagacccactttcttgcttatgtgtcttatttttgcatagctgtcacttgctgactgtttaattgtgcacatgtggcagcca 29794178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 19603736 - 19603790
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtcc 285  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  19603736 taggcttaaatatgtttttggtccctgcaaatataactcatttgggttttggtcc 19603790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 2412489 - 2412428
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||    
T  2412489 taggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 2412428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 25977868 - 25977929
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  25977868 taggctaaaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 25977929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 1777468 - 1777528
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  |||| |||||||||||||||||    
T  1777468 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctggtaa 1777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 19604978 - 19604919
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||| |||||| || ||||||||||||||||||||||||    
T  19604978 ggctaaaatatgtttttggtccctgtaaatatggctcatttgggttttggtccctggtaa 19604919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 4040270 - 4040216
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||||||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  4040270 aaatatgattttggtccctgcaaatatagagaatttaggttttgctccctggtaa 4040216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 8809595 - 8809656
Alignment:
Q  232 aggcttaaatatgattttggtccct-gcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||| ||||||||| || |||||||||||||||||||||||    
T  8809595 aggctaaaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccctggtaa 8809656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 1778849 - 1778790
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  1778849 ggctaaaatatgcttttggttcctgcaaatatagcgactttgggttttggtccttggtaa 1778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 25283331 - 25283272
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||| |||||||||||||| ||||| |||||| ||||||||||    
T  25283331 ggctaaaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccctggtaa 25283272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 36837824 - 36837778
Alignment:
Q  246 ttttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  36837824 ttttggtctctgcaaatatagcgagtttgggttttggtccctggtaa 36837778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 23861750 - 23861811
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||| | |  ||||| ||||||||||||||||    
T  23861750 taggctaaaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggtaa 23861811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 29794377 - 29794321
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||    
T  29794377 taggctaaaatatg-ttttggtccctgcaaatatagcgaatttgagttttggttcctg 29794321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 30215873 - 30215816
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||| ||| ||| |||||| |||||||    
T  30215873 taggctaaaatatggttttggtccctgcaaatatatcgcgttttggttttagtccctg 30215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 11087049 - 11087108
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||||||||  |||||||||||||||||  ||||| ||||||||| ||||||    
T  11087049 ggctaaaatatgattttaatccctgcaaatatagcgagtttggcttttggtccttggtaa 11087108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 11088739 - 11088680
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||| |||| ||||||||||||| ||||| |||||||| ||||||||    
T  11088739 ggctaaaatatgtttttcgtccatgcaaatatagcgaatttgagttttggttcctggtaa 11088680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 8810757 - 8810703
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||| |||||||||||||| |||||| ||||  ||||||||||    
T  8810757 aaatatgtttttggtctctgcaaatatagcgaatttggattttaatccctggtaa 8810703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 10671627 - 10671685
Alignment:
Q  230 gtaggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| ||||||| |||||||||||||||||||| | | ||| |||||| |||||||    
T  10671627 gtaggctaaaatatggttttggtccctgcaaatatatctcgttttggttttagtccctg 10671685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 20245343 - 20245305
Alignment:
Q  254 cctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  20245343 cctgcaaatatagcgaatttgggttttagtccctggtaa 20245305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 43824168 - 43824222
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||| |||||||||||||||||  ||||| |||||||||||| ||||    
T  43824168 aaatatgtttttcgtccctgcaaatatagcaaatttgagttttggtccctagtaa 43824222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 3172019 - 3172072
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtcc 285  Q
    ||||| |||||||||||||||||||||||||||  | ||||| |||||| ||||    
T  3172019 aggctaaaatatgattttggtccctgcaaatatgcctcattttggttttagtcc 3172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 7814739 - 7814682
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| |||||||||||| ||||||||||||||  | ||||| |||||| |||||||    
T  7814739 taggctaaaatatgattttagtccctgcaaatatgcctcattttggttttagtccctg 7814682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 12067002 - 12067051
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccct 287  Q
    ||||||| ||||||||||| |||||||| || ||||| ||||||||||||    
T  12067002 aaatatgtttttggtccctacaaatataacgaatttgagttttggtccct 12067051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 24754212 - 24754171
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttt 279  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||    
T  24754212 aaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 16673410 - 16673466
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  16673410 aggctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctg 16673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30843643 - 30843703
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||  || ||||||||||| ||  ||||||||||||||||||||||    
T  30843643 aggctaaaatatgcttttaatcactgcaaatataacgagtttgggttttggtccctggtaa 30843703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 40125290 - 40125258
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  40125290 aggctaaaatatgattttggtccctgcaaatat 40125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 43672319 - 43672287
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  43672319 aggctaaaatatgattttggtccctgcaaatat 43672287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 231 - 434
Target Start/End: Complemental strand, 47433870 - 47433671
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnn 330  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||            |||||||||||||||||||           
T  47433870 taggctaaaatatggttttggtccctgcaaatatagcgaatttgagttttggtccctggtaaaaaaaaatt---gaaatcaatccctgcaaaattttttg 47433774  T
Q  331 nnnnnnaaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagccat 429  Q
          |||||||||||||  |||||||||||||||  |||||||||||| ||||| ||||||| || ||||||||| ||||||| ||||||||||||||    
T  47433773 ttttttaaaaaggtccttgatcccactttcttgtct--gtgtctgatttttgcatacgtgtcacctgttgactgttcaattttgctcatgtggcagccat 47433676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 39820665 - 39820604
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  39820665 taggctaaaatatggttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 39820604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 52403185 - 52403124
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||    
T  52403185 taggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 52403124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 54437528 - 54437467
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  54437528 taggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttggtccctagtaa 54437467  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 976883 - 976975
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| |  |||||||||||  ||||||||| ||||| ||||| |||||||||||||||||||  ||| |||||||| ||||||||    
T  976883 aaaaaggtccttaggtccactttcttgcttatgtgtcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgcggcagcca 976975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 40477434 - 40477374
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||    
T  40477434 aggctaaaatatgattttggtccctgcaaatataacgagtttgggttttggtccctagtaa 40477374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 52401016 - 52401076
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||    
T  52401016 aggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 52401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 53121301 - 53121361
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  |||||||||| |||||||||||    
T  53121301 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggtaa 53121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 46104343 - 46104402
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||||    
T  46104343 ggctaaaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccctggtaa 46104402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 52708676 - 52708617
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  |||||||||||||| |||||||    
T  52708676 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtctctggtaa 52708617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 20488371 - 20488425
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||||||||||||    
T  20488371 aaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccctggtaa 20488425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 22508740 - 22508794
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||| ||||||    
T  22508740 aaatatgattttggtccctgcaaatatagcgagtttgagttttggtccttggtaa 22508794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 46026074 - 46026135
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  46026074 taggctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctagtaa 46026135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 11914879 - 11914833
Alignment:
Q  246 ttttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||    
T  11914879 ttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 11914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 20489412 - 20489358
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||||||||||  ||  ||||||||||||||||||||||    
T  20489412 aaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggtaa 20489358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 45267310 - 45267364
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||| |||||||||||||||||  |||| |||||||||||||||||    
T  45267310 aaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccctggtaa 45267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 52707541 - 52707591
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||||||||||||    
T  52707541 aaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctg 52707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 976778 - 976839
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||  ||||| |||||||||||    
T  976778 taggctaaaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccctggtaa 976839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 20585705 - 20585648
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| ||||| |||||||||||||||||  ||||| ||||||||||||    
T  20585705 taggctaaaatatgtttttgatccctgcaaatatagcgagtttggattttggtccctg 20585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 42446524 - 42446577
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtc 284  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||||||||||||||    
T  42446524 taggctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtc 42446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 45268631 - 45268570
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||  ||||||||||||||||   ||||||||||||||||||||||    
T  45268631 taggctaaaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccctggtaa 45268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 3416494 - 3416554
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||||||||| |||||| |||||||||   ||||| ||||||||||||||||    
T  3416494 aggctaaaatatgattttgatccctgtaaatatagcaagtttggtttttggtccctggtaa 3416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 20488483 - 20488559
Alignment:
Q  353 ccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    ||||||| |||  ||||||||||||||| ||||| ||||||| |||||| ||||  ||| |||||||||||||||||    
T  20488483 ccactttattgcttatgtgtctgatttttgcataggtgtcacatgctgattgtttaattgtgcacatgtggcagcca 20488559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 44507859 - 44507823
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcg 268  Q
    ||||| |||||||||||||||||||||||||||||||    
T  44507859 aggctaaaatatgattttggtccctgcaaatatagcg 44507823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 46027477 - 46027417
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||  |||||||||||||||||||||||  ||||  ||||||||||||||||    
T  46027477 aggctaaaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggtaa 46027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 977905 - 977846
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||  ||  ||||||||||||||| ||||||    
T  977905 ggctgaaatatgcttttggtccctgcaaatatgacgagtttgggttttggtccttggtaa 977846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 4705681 - 4705740
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||| ||||||||||||| |||  ||| ||||||||||||||||||    
T  4705681 ggctaaaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccctggtaa 4705740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 9855178 - 9855237
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||||||||| |||||| ||||||||||  ||||| ||||||||||| ||||    
T  9855178 ggctaaaatatgattttgatccctgtaaatatagcgagtttggattttggtccctagtaa 9855237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 43641143 - 43641202
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||| ||||||||||||||||||  ||||| || |||||||||||||    
T  43641143 ggctaaaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggtaa 43641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 32637242 - 32637188
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||| |||| |||||  ||||||||||||| ||||||||    
T  32637242 aaatatgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggtaa 32637188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 39819317 - 39819371
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||| ||||||||||||||||||  ||||  ||||||||||||||||    
T  39819317 aaatatggttttagtccctgcaaatatagcgagtttgaattttggtccctggtaa 39819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 40476226 - 40476272
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtc 284  Q
    ||||||| |||||||||||||||||||||||  ||||| ||||||||    
T  40476226 aaatatgtttttggtccctgcaaatatagcgagtttggattttggtc 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 40545834 - 40545784
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||||||||||||||||||||||||  | ||||| |||||| |||||||    
T  40545834 aaatatgattttggtccctgcaaatatgtctcattttggttttagtccctg 40545784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 30106222 - 30106165
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||| | | ||| |||||| |||||||    
T  30106222 taggctaaaatatggttttggtccctgcaaatatacctcgttttggttttagtccctg 30106165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 19844582 - 19844526
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  19844582 aggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 19844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 32119585 - 32119553
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  32119585 aggctaaaatatgattttggtccctgcaaatat 32119553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 32635593 - 32635653
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||  |||| |||| || ||||||||||  ||||||||||||||||||||||    
T  32635593 aggctaaaatatattttttgtccttgtaaatatagcgagtttgggttttggtccctggtaa 32635653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 35177254 - 35177286
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  35177254 aggctaaaatatgattttggtccctgcaaatat 35177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 38232240 - 38232272
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  38232240 aggctaaaatatgattttggtccctgcaaatat 38232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 47114486 - 47114518
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  47114486 aggctaaaatatgattttggtccctgcaaatat 47114518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 239 - 434
Target Start/End: Complemental strand, 43869965 - 43869770
Alignment:
Q  239 aatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnnnnnnnnaa 338  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||            |||||||||||||||||||             ||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccctggtaaaattttttttt-gaaatcaatccctgcaaaattttttgttttttaa 43869867  T
Q  339 aaaggtccttggccccactttcttgtctatgtgtctga-ttttgcatatgtgtcacttgctgactgttccattttgcacatgtggcagccatgtcat 434  Q
    |||||||||| |||||||||||||| ||||||||| || |||||| || ||||||| |||||||||||| | |||||| ||||||||||||||||||    
T  43869866 aaaggtccttcgccccactttcttgcctatgtgtcagaattttgcttacgtgtcacgtgctgactgttcaaatttgcatatgtggcagccatgtcat 43869770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 32544828 - 32544774
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  32544828 aaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggtaa 32544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 31848205 - 31848144
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  31848205 taggctaaaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccctggtaa 31848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 32197970 - 32197909
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  32197970 taggctaaaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggtaa 32197909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 12385761 - 12385707
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  12385761 aaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggtaa 12385707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 5611568 - 5611507
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||| |||||| ||||    
T  5611568 taggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccctcgtaa 5611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 24197164 - 24197103
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  24197164 taggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggtaa 24197103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 13418949 - 13419009
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  13418949 aggctaaaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccctggtaa 13419009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 24195606 - 24195666
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  24195606 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggtaa 24195666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 41693644 - 41693704
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  41693644 aggctaaaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccctggtaa 41693704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 32196689 - 32196739
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  32196689 aaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctg 32196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 17066423 - 17066484
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||  |||||||||||||||||  ||||||||||||||||||||||    
T  17066423 taggctaaaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccctggtaa 17066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 35212067 - 35212127
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||  ||  ||||||||||||||||||||||    
T  35212067 aggctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggtaa 35212127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 554244 - 554298
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccc 286  Q
    ||||| |||||| || |||||||||||||||||||||  ||||||||||||||||    
T  554244 aggctaaaatataatattggtccctgcaaatatagcgagtttgggttttggtccc 554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 11217125 - 11217071
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||||||||||||||  ||||  ||||||||||||||||    
T  11217125 aaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccctggtaa 11217071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 38742186 - 38742240
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||| ||||||||||||||||||  |||||||||||||||| |||||    
T  38742186 aaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccccggtaa 38742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 12933417 - 12933478
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||| |  ||||  ||||||||||||||||    
T  12933417 taggctaaaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccctggtaa 12933478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 28462585 - 28462492
Alignment:
Q  337 aaaaaggtccttggccccac-tttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||| ||| |||  ||||||||| ||||| ||||| |||||||||||||||||||  | | |||||||||||||||||    
T  28462585 aaaaaggtccttaggcccacattttttgcttatgtgtcttatttttgcataggtgtcacttgctgactgtttaactgtgcacatgtggcagcca 28462492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 40576764 - 40576825
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||  || |||||| |||||||| |||||||    
T  40576764 taggctaaaatatgcttttggtccctgcaaatatgacgaatttggattttggtctctggtaa 40576825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 41695016 - 41694955
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||  |||||||||||||||||  |||| |||||||||||||||||    
T  41695016 taggctaaaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccctggtaa 41694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 42254957 - 42255017
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||| |||||| |||  |||| |||||||||||||||||    
T  42254957 aggctaaaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccctggtaa 42255017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 31489989 - 31489942
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtcc 285  Q
    ||||||| |||||||||||||||||||| ||  |||||||||||||||    
T  31489989 aaatatgtttttggtccctgcaaatataacgagtttgggttttggtcc 31489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 5610161 - 5610215
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||| |||||||||||||| || ||||||||||| ||| |||||||    
T  5610161 aaatatgcttttgatccctgcaaatataacgaatttgggttttagtctctggtaa 5610215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 28462682 - 28462628
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||| ||||||||||  || |||||||||||| ||||||||||    
T  28462682 aaatatgcttttggtctctgcaaatatgacgaatttgggttttgatccctggtaa 28462628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 31846991 - 31847045
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||||||||||| |  |||||| ||||||| ||||||||    
T  31846991 aaatatgcttttggtccctgcaaatatatctaatttggattttggttcctggtaa 31847045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 25046301 - 25046240
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||||||||||||| ||||||||| |||  ||| | ||||||||| ||||||    
T  25046301 taggctaaaatatgattttggtccttgcaaatatggcgagtttagattttggtccatggtaa 25046240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 29198301 - 29198358
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||| | | ||| |||||| |||||||    
T  29198301 taggctaaaatatggttttggtccctgcaaatatatctcgttttggttttagtccctg 29198358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 41054238 - 41054181
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  41054238 taggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 41054181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 25037753 - 25037809
Alignment:
Q  236 ttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||| ||||||||||||||  ||  ||||  ||||||||||||||||    
T  25037753 ttaaatatgattttagtccctgcaaatatgacgagtttgaattttggtccctggtaa 25037809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 36687264 - 36687232
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  36687264 aggctaaaatatgattttggtccctgcaaatat 36687232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 39619852 - 39619800
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggt 283  Q
    |||||| ||||||| ||||||||| ||||||||| |||  |||||||||||||    
T  39619852 taggctaaaatatgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 44568325 - 44568381
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||| | | ||| |||||| |||||||    
T  44568325 aggctaaaatatggttttggtccctgcaaatataactcgttttggttttagtccctg 44568381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 1376933 - 1376994
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  1376933 taggcttaaatatgattttggtccctgcaaatatagccaatttggattttggtccctggtaa 1376994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 1385616 - 1385555
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  1385616 taggcttaaatatggttttggtccctgcaaatatagccaatttggattttggtccctggtaa 1385555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 10717119 - 10717180
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  10717119 taggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 10717180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 10718509 - 10718448
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  10718509 taggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 10718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 22272330 - 22272270
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  22272330 aggctaaaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccctggtaa 22272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 4182627 - 4182681
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  4182627 aaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccctggtaa 4182681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 28996839 - 28996893
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  28996839 aaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 28996893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 38456791 - 38456730
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  38456791 taggctaaaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccctggtaa 38456730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 38658479 - 38658540
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| || |||||| ||||||||||||| |||||||||||||||||||||||    
T  38658479 taggctaaaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggtaa 38658540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 22534782 - 22534722
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  22534782 aggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 22534722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 36588221 - 36588281
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  |||| |||||||||||||||||    
T  36588221 aggctaaaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggtaa 36588281  T

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Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 4184038 - 4183979
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||| |||||||||||||||| || ||||||||||||||||||||||    
T  4184038 ggctaaaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggtaa 4183979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 28998052 - 28997993
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  28998052 ggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctagtaa 28997993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 45518021 - 45517962
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggt 290  Q
    |||||| ||||||| ||||||||||||||| |||||||  ||||||||||||||||||||    
T  45518021 taggctaaaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 297076 - 296986
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagc 426  Q
    |||||||| ||| | ||||||||||||  ||||||||| ||||| ||||| |||||||||||||||||||  ||| |||||||| ||||||    
T  297076 aaaaaggttcttagacccactttcttgcttatgtgtcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgcggcagc 296986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 34904563 - 34904509
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||    
T  34904563 aaatatgattttagtcccttcaaatatagcgaatttgggttttggttcctggtaa 34904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 22270941 - 22271002
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| ||||||||||||||||| |||||| |||| |||||||||||    
T  22270941 taggctaaaatatgcttttgatccctgcaaatatagcgaatttggattttagtccctggtaa 22271002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 22533316 - 22533376
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||| | ||||||||  ||||||||||||||||||||||    
T  22533316 aggctaaaatatgcttttggtccctgtatatatagcgagtttgggttttggtccctggtaa 22533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 30123254 - 30123346
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | |||||| |||||  |||||||||||||||  |||| |||||||||||||| ||||  ||| |||||||||||| ||||    
T  30123254 aaaaaggtccttaggcccactctcttgcttatgtgtctgattttcccataagtgtcacttgctgattgtttaattgtgcacatgtggcggcca 30123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 3030396 - 3030455
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||| |||||||||||||||||||  | |||||| |||||||| ||||||||    
T  3030396 ggcttaaatatgcttttggtccctgcaaatatgactcatttgagttttggttcctggtaa 3030455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 3031602 - 3031543
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||| |||||| || ||||| ||||||||||||||||||    
T  3031602 ggctaaaatatgtttttggtccctgtaaatatggctcatttaggttttggtccctggtaa 3031543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 3483638 - 3483688
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  3483638 aaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 10292815 - 10292864
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttg 281  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||    
T  10292815 aggctaaaatatgattttggtcccttcaaatatagcgaatttgcgttttg 10292864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 30124284 - 30124223
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||| |||   |||| |||||||||||||||||    
T  30124284 taggctaaaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccctggtaa 30124223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 41847241 - 41847184
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||| ||| |||||||||||||| ||||| |||||||||||||    
T  41847241 taggctaaaatatgcttttagtctctgcaaatatagcgaatttgagttttggtccctg 41847184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 14197824 - 14197884
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||| |||  ||||| ||||||||||| ||||    
T  14197824 aggctaaaatatgtttttggtccctgcaaatatggcgagtttggattttggtccctagtaa 14197884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 36589447 - 36589387
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||| || |||||||||||||||  ||| ||||||||||| ||||||    
T  36589447 aggctaaaatatgattttagttcctgcaaatatagcgagtttaggttttggtccttggtaa 36589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 39439923 - 39439983
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||||||||||||||||||||||| ||   |||| ||||||| |||||||||    
T  39439923 aggctaaaatatgattttggtccctgcaaatatggctagtttgagttttggaccctggtaa 39439983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 1420501 - 1420446
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||| ||||||| |||||||||||||||||||||||  ||||| | ||||||||||    
T  1420501 ggctaaaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctg 1420446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 27117977 - 27117922
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccct 287  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||||||||||    
T  27117977 aggctaaaatatggttttggtccctgcaaatatgcctcattttggttttggtccct 27117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 422
Target Start/End: Complemental strand, 28875401 - 28875315
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctga-ttttgcatatgtgtcacttgctgactgttccattttgcacatgtgg 422  Q
    |||||||| ||||| ||||||||||||  ||||||| ||| ||||| ||| ||||||||||| |||| ||  ||| |||||||||||    
T  28875401 aaaaaggttcttgggcccactttcttgcttatgtgtttgatttttgtataggtgtcacttgcagactatttaattgtgcacatgtgg 28875315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 38455452 - 38455506
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||||||| ||||||||||| | ||||| |||||||||||| ||||    
T  38455452 aaatatgtttttggtccttgcaaatatagtgaatttgagttttggtccctagtaa 38455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 45516402 - 45516456
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| |||| |||| || |||||||||| ||||||||||||||| |||||||    
T  45516402 aaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggtaa 45516456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 1526174 - 1526113
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| |||||||||||||| || | ||| |||||| |||||||||||    
T  1526174 taggctaaaatatggttttagtccctgcaaatatggctcgttttggttttagtccctggtaa 1526113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 5357421 - 5357454
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  5357421 taggctaaaatatgattttggtccctgcaaatat 5357454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 17073805 - 17073862
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  17073805 taggctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctg 17073862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 17574465 - 17574408
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  17574465 taggctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctg 17574408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 2728231 - 2728263
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  2728231 aggctaaaatatgattttggtccctgcaaatat 2728263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 3680802 - 3680746
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||||||||| |||||||||||||  | | ||| ||||||||||||||    
T  3680802 aggctaaaatatgattttgatccctgcaaatatgcctcgttttggttttggtccctg 3680746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 20984145 - 20984201
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| ||||||||||||||||||| || | ||| |||||| |||||||    
T  20984145 aggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 20984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 28497254 - 28497286
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  28497254 aggctaaaatatgattttggtccctgcaaatat 28497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 30123151 - 30123199
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggtttt 280  Q
    ||||| ||||||| ||||||||| | ||||||||||| |||||||||||    
T  30123151 aggctaaaatatgtttttggtccatacaaatatagcgaatttgggtttt 30123199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 36623351 - 36623407
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||||||||| |||| ||||||||||||||||  ||||||  |||| |||||||    
T  36623351 aggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctg 36623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 44997930 - 44997962
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  44997930 aggctaaaatatgattttggtccctgcaaatat 44997962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 11582 - 11522
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11582 aggctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggtaa 11522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 10315 - 10374
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  10315 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaa 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 2e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 428
Target Start/End: Complemental strand, 345958 - 345762
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaannnnnnnnnnnngaaatcaatccctgcaaaannnnnnn 330  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||            |||||||||||||||||||           
T  345958 taggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctagtaa--ttttttttttgaaatcaatccctgcaaaattttttg 345861  T
Q  331 nnnnnnaaaaaggtccttggccccactttcttgtctatgtgtctga-ttttgcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
          |||||||||||| | | ||||||||||  ||||| ||| | ||||||| || ||||||||||||||||||  ||| |||||||||||||||||    
T  345860 ttttttaaaaaggtccttagacacactttcttgcttatgtatcttatttttgcacatatgtcacttgctgactgtttaattgtgcacatgtggcagcca 345762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 344935 - 344996
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  344935 taggctcaaatatgattttggtccctgcaaatatggcgagtttgggttttggtccctggtaa 344996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 374335 - 374394
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||||||||| |||||||||||||||||  ||||||||||||||||| ||||    
T  374335 ggctaaaatatgattttgatccctgcaaatatagcgagtttgggttttggtcccttgtaa 374394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 376430 - 376381
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggtttt 280  Q
    |||||| ||||||| |||||||||||||||||||||||  ||||||||||    
T  376430 taggctaaaatatgcttttggtccctgcaaatatagcgagtttgggtttt 376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 21953204 - 21953265
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  21953204 taggctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccctggtaa 21953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 33131856 - 33131948
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||||||||||||  ||||||||| ||||| | ||| |||||||||||||||||||  ||| |||||||||||||||||    
T  33131856 aaaaaggtccttaggcccactttcttgcttatgtgtcttatttttgtataagtgtcacttgctgactgtttaattgtgcacatgtggcagcca 33131948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 18810532 - 18810591
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  18810532 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 18810591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 20897556 - 20897497
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  20897556 ggctaaaatatggttttggtccctgcaaatatagtgaatttgggttttggtccctggtaa 20897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 34998203 - 34998141
Alignment:
Q  230 gtaggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  34998203 gtaggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaa 34998141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 16995450 - 16995510
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| ||||||||||||||||||||  | |||||||||||||||||||||||    
T  16995450 aggctaaaatatgtttttggtccctgcaaatataaagaatttgggttttggtccctggtaa 16995510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 25439750 - 25439842
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgatttt-gcatatgtgtcacttgctgactgttccattttgcacatgtggcagcca 428  Q
    |||||||||||| | ||| ||||||||  ||| ||||| ||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||    
T  25439750 aaaaaggtccttagacccgctttcttgcttatatgtcttatttttgcataggtgtcacttgctgactgtttaattgtgcacatgtggcagcca 25439842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 21165246 - 21165305
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||||||  |||| |||||||||||||||||    
T  21165246 ggctaaaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaa 21165305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 20391219 - 20391273
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||    
T  20391219 aaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccctcgtaa 20391273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 3276365 - 3276426
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||| |||| |||||| ||||    
T  3276365 taggctaaaatatgtttttggtccctgcaaatatagcgaatttggattttagtccctagtaa 3276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 17517370 - 17517309
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||| |||  |||| |||||||||||||||||    
T  17517370 taggctaaaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggtaa 17517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 34995112 - 34995173
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||| |||||||| ||||||||    
T  34995112 taggctaaaatatgcttttgatccctgcaaatatagcgaatttgagttttggttcctggtaa 34995173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 1972400 - 1972459
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||| |||| ||||||||||| ||| |||||||    
T  1972400 ggctaaaatatgtttttggtccctgcaaataaagcgaatttgggttttagtctctggtaa 1972459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 20393327 - 20393268
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||| ||||||||||||||||| ||||||||||  |||||||||||    
T  20393327 ggctaaaatatgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggtaa 20393268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 26421903 - 26421843
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||| ||| |||||||| |||||||||||||| ||||| ||||| |||||||||||    
T  26421903 aggctaaaacatgtttttggtctctgcaaatatagcgaatttgagttttagtccctggtaa 26421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 29291358 - 29291414
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| ||||||||| ||||||||| |||  ||||||||||||||||||    
T  29291358 aggctaaaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 1974211 - 1974156
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||| ||||||| ||||| ||| ||||||||||||| ||||| |||||||||||||    
T  1974211 ggctaaaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccctg 1974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 17516167 - 17516217
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||||| ||||||||||||||||||| | |  ||||||||||||||||||    
T  17516167 aaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctg 17516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 20895963 - 20896005
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggtttt 280  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||    
T  20895963 aaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 19129522 - 19129489
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatat 264  Q
    |||||| |||||||||||||||||||||||||||    
T  19129522 taggctaaaatatgattttggtccctgcaaatat 19129489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 777676 - 777736
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||| || |||||||||||| | | ||| |||||| |||||||||||    
T  777676 aggctaaaatatgattttagttcctgcaaatatacctcgttttggttttagtccctggtaa 777736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 17765376 - 17765344
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatat 264  Q
    ||||| |||||||||||||||||||||||||||    
T  17765376 aggctaaaatatgattttggtccctgcaaatat 17765344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 21385585 - 21385529
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  21385585 aggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 21385529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 3936577 - 3936637
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  3936577 aggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 3936637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 27571189 - 27571129
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  27571189 aggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttgatccctggtaa 27571129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 3954050 - 3954111
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||| |||||||||| || |||||||||||||||||||||||    
T  3954050 taggctaaaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccctggtaa 3954111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 31540494 - 31540555
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||||| || |||||||||||||| ||||||||    
T  31540494 taggctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtacctggtaa 31540555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35365834 - 35365904
Alignment:
Q  1 caaattaaatttgaaagttaaataagctagtaaaattgtacccgggagaaaacaaattatatgataatatt 71  Q
    |||||| |||| ||||||||||||| ||||| ||||||| |  |||||||||||||||||||| |||||||    
T  35365834 caaattcaattggaaagttaaataatctagtgaaattgttcttgggagaaaacaaattatatggtaatatt 35365904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 4565391 - 4565452
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| |||||| |||||||||||  ||||||||||||||||||||||    
T  4565391 taggctaaaatatgtttttagtccctacaaatatagcgagtttgggttttggtccctggtaa 4565452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 34911888 - 34911828
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||||||||||||||||||||||  ||||| ||||| ||||| ||||    
T  34911888 aggctaaaatatgattttggtccctgcaaatatagcgagtttggattttgatccctagtaa 34911828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 15599763 - 15599818
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccc 286  Q
    |||||| ||||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  15599763 taggctaaaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 27098323 - 27098232
Alignment:
Q  337 aaaaaggtccttggccccactttcttgtctatgtgtctgattttg-catatgtgtcacttgctgactgttccattttgcacatgtggcagcc 427  Q
    |||||||  ||||| | ||||||||||  |||||||||||||||  |||| |||||||||||||||||||  ||| |||||| |||||||||    
T  27098323 aaaaaggatcttgggctcactttcttgcttatgtgtctgatttttacataggtgtcacttgctgactgtttaattatgcacaggtggcagcc 27098232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 3938121 - 3938060
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||| |||||||||||||||||   ||| ||||||||||||||||||    
T  3938121 taggctaaaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggtaa 3938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 18258161 - 18258217
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| ||||||||||||||||||| || ||||| |||||| |||||||    
T  18258161 aggctaaaatatggttttggtccctgcaaatatggctcattttggttttagtccctg 18258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 27570061 - 27570109
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccc 286  Q
    ||||||||||||||||| |||||||||||||  ||||||||||| ||||    
T  27570061 aaatatgattttggtccttgcaaatatagcgagtttgggttttgttccc 27570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 31541681 - 31541622
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||| |||||||||||||| || |||| |||||| |||||||||||    
T  31541681 ggctaaaatatgtttttgatccctgcaaatataacgaattttggtttttgtccctggtaa 31541622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 35433804 - 35433851
Alignment:
Q  92 aaataataatgatatcatggtcttttag-aaattggtaattaaatatg 138  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||    
T  35433804 aaataataatgatatcatggtttttgagaaaattggtaattaaatatg 35433851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 6244436 - 6244382
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||||||||||||  | ||||||| | |||| |||||||||    
T  6244436 aaatatgattttggtccctgcaaatatgactcatttggatattggaccctggtaa 6244382  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 4777638 - 4777699
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||| |||| |||| |||||||||||    ||||| ||||||||||||||||    
T  4777638 taggcttaaatatgcttttagtccttgcaaatatagtaagtttggattttggtccctggtaa 4777699  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 14809168 - 14809217
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccct 287  Q
    ||||||| ||||| ||||| ||||||||||| |||||| |||||||||||    
T  14809168 aaatatgtttttgatccctacaaatatagcgaatttggattttggtccct 14809217  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 24443379 - 24443435
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    ||||| ||||||| |||||||||||||||||||  | ||||| |||||| |||||||    
T  24443379 aggctaaaatatggttttggtccctgcaaatatgcctcattttggttttagtccctg 24443435  T

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Target: scaffold0230 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 490 - 431
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  490 ggctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 431  T

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Target: scaffold0001 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 119593 - 119652
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  119593 ggctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccctggtaa 119652  T

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Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 121044 - 120985
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| ||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  121044 ggctaaaatatgcttttggtccctgcaaatataacgagtttgggttttggtccctggtaa 120985  T

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Target: scaffold0106 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 30968 - 30907
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  30968 taggctaaaatatggttttggtccctgcaaatatagtgagtttgggttttggtccctggtaa 30907  T

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Target: scaffold0106; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 29727 - 29788
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| |||||||||||||||||| | ||  ||||| ||||||||||||||||    
T  29727 taggctaaaatatgcttttggtccctgcaaataaaacgagtttggattttggtccctggtaa 29788  T

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Target: scaffold0562 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 9920 - 9981
Alignment:
Q  231 taggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||| ||||||| ||||| |||||||||||||||||  ||||| ||||||||||||||||    
T  9920 taggctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaa 9981  T

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Target: scaffold0765 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 1865 - 1919
Alignment:
Q  238 aaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||||||||||||||||||||||||||||||  |||| |||||| ||||| ||||    
T  1865 aaatatgattttggtccctgcaaatatagcgagtttgagttttgatccctagtaa 1919  T

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Target: scaffold0599 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 6630 - 6584
Alignment:
Q  246 ttttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||||    
T  6630 ttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 6584  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 202578 - 202638
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| ||||||| |||||||||||||||||||| ||  ||||| |||||||||| |||||    
T  202578 aggctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtcccgggtaa 202638  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 16724 - 16779
Alignment:
Q  233 ggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctg 288  Q
    |||| |||||||||||||||||||||||||||| | | ||| |||||| |||||||    
T  16724 ggctaaaatatgattttggtccctgcaaatatatctcgttttggttttagtccctg 16779  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 8546 - 8606
Alignment:
Q  232 aggcttaaatatgattttggtccctgcaaatatagcgcatttgggttttggtccctggtaa 292  Q
    ||||| |||||||||||| ||||||||||||||  | | ||| |||||| |||||||||||    
T  8546 aggctaaaatatgattttagtccctgcaaatatgcctcgttttggttttagtccctggtaa 8606  T

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