View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16931_low_37 (Length: 363)
Name: NF16931_low_37
Description: NF16931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16931_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 353
Target Start/End: Original strand, 40567920 - 40568254
Alignment:
| Q |
19 |
ctctaatgcttgcttatgtgtgcagatattatatcatactaaacaacctattgaagtaaagaccatttcagtgtttacggtctattatttcaacgctaat |
118 |
Q |
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| T |
40567920 |
ctctaatgctagcttatgtatgcagatattatatcatactaaacaacctattgaagtaaagaccatttcagtgtttacggtctattatttcaacgctaat |
40568019 |
T |
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| Q |
119 |
accttctagagcttatggtctatattttacctcaaaagtaaaaactaagtctaatacattctagagcttacaatctcttgatcaacgtataatacttata |
218 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
40568020 |
accttctagagcttatggtctatatattacctcaaaagtaaaaactaggtctaatacattctagagcttacaatctcttgatcaacgtataataattata |
40568119 |
T |
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| Q |
219 |
gtgtcgacttatatcaagcacaaaaagcatatggtacttggaccttacccaaaaagatatgaagtgtgtctcgcactcaatgaatggcatcatataatcc |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
40568120 |
gtgtcgacttatatcaagcacaaaaagcatatggtacttggaccttacccaaaaagatatgaagtgtgtctcgcactcaatgaatggtatcatataatcc |
40568219 |
T |
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| Q |
319 |
tgtcttgaatacttcatcaggtctcattaattcat |
353 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
40568220 |
tgtcttgaatacttcatcaggtctcattaattcat |
40568254 |
T |
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