View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16931_low_63 (Length: 224)
Name: NF16931_low_63
Description: NF16931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16931_low_63 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 16762618 - 16762814
Alignment:
| Q |
16 |
gtttggttttcagttgtaaaatccatagggttcaaatgtatgtttgtcctaaaggtggtatataaatattttgattagaaatgtatgcgacttcaaacca |
115 |
Q |
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| T |
16762618 |
gtttggttttcagttgtaaaatccatagggttcaaatgtatgtttgtcctaaaggtggtatataaatattttgattagaaatgtatgcgacttcaaacca |
16762717 |
T |
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| Q |
116 |
tacatacaccaagtgtatttgtcaccatgcttttgttccaccttattttgaacttgaaggaagcttgtaataggggttttgtctattttctgatttt |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16762718 |
tacatacaccaagtgtatttgtcaccatgcttttgttccaccttattttgaacttgaaggaagcttgtaataggggttttgtctattttctgatttt |
16762814 |
T |
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