View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16933_high_26 (Length: 311)

Name: NF16933_high_26
Description: NF16933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16933_high_26
NF16933_high_26
[»] scaffold0449 (1 HSPs)
scaffold0449 (8-225)||(4088-4286)
[»] chr3 (27 HSPs)
chr3 (249-296)||(46429508-46429555)
chr3 (249-296)||(9129456-9129503)
chr3 (249-296)||(9137563-9137610)
chr3 (249-296)||(47284338-47284385)
chr3 (249-298)||(5415893-5415942)
chr3 (249-296)||(5415783-5415830)
chr3 (249-296)||(7302346-7302393)
chr3 (249-296)||(42005978-42006025)
chr3 (249-296)||(44436258-44436305)
chr3 (249-296)||(46672828-46672875)
chr3 (249-296)||(47767432-47767479)
chr3 (249-296)||(49457343-49457390)
chr3 (249-298)||(9129344-9129393)
chr3 (249-298)||(9137451-9137500)
chr3 (251-296)||(39215950-39215995)
chr3 (249-294)||(53129870-53129915)
chr3 (249-293)||(46001364-46001408)
chr3 (249-296)||(27252006-27252053)
chr3 (249-296)||(31189422-31189469)
chr3 (253-296)||(35279927-35279970)
chr3 (249-296)||(36398014-36398061)
chr3 (249-296)||(37054394-37054441)
chr3 (249-296)||(37321550-37321597)
chr3 (249-296)||(44692822-44692869)
chr3 (249-296)||(44692934-44692981)
chr3 (249-280)||(47284226-47284257)
chr3 (251-296)||(42130694-42130739)
[»] chr4 (25 HSPs)
chr4 (251-296)||(26250911-26250956)
chr4 (249-296)||(4896648-4896695)
chr4 (249-296)||(15660295-15660342)
chr4 (249-296)||(2125857-2125904)
chr4 (249-296)||(5715744-5715791)
chr4 (251-298)||(7352814-7352861)
chr4 (249-296)||(11040968-11041014)
chr4 (249-296)||(15660183-15660230)
chr4 (249-296)||(41498602-41498649)
chr4 (249-296)||(49111424-49111471)
chr4 (251-296)||(4896744-4896789)
chr4 (251-296)||(10127976-10128021)
chr4 (251-296)||(42844655-42844700)
chr4 (249-293)||(1112605-1112649)
chr4 (249-296)||(857351-857398)
chr4 (249-296)||(1107164-1107211)
chr4 (249-296)||(7352924-7352971)
chr4 (249-296)||(14982280-14982327)
chr4 (249-296)||(16516171-16516218)
chr4 (249-292)||(31473849-31473892)
chr4 (249-296)||(31742876-31742923)
chr4 (249-296)||(36455907-36455954)
chr4 (250-296)||(4441338-4441384)
chr4 (251-297)||(42542978-42543024)
chr4 (252-292)||(10633035-10633075)
[»] chr8 (20 HSPs)
chr8 (249-296)||(24044960-24045007)
chr8 (249-296)||(3853616-3853663)
chr8 (249-296)||(3858074-3858121)
chr8 (249-296)||(14800072-14800119)
chr8 (249-296)||(14991692-14991739)
chr8 (249-296)||(37268119-37268166)
chr8 (251-296)||(4156279-4156324)
chr8 (251-296)||(13404829-13404874)
chr8 (249-292)||(11744759-11744802)
chr8 (249-296)||(17110869-17110916)
chr8 (249-296)||(28324698-28324745)
chr8 (249-296)||(31807409-31807455)
chr8 (249-296)||(32626070-32626117)
chr8 (249-296)||(33902667-33902714)
chr8 (249-296)||(42711392-42711439)
chr8 (251-293)||(3853731-3853773)
chr8 (251-293)||(3858189-3858231)
chr8 (249-294)||(27322687-27322732)
chr8 (249-294)||(29257389-29257434)
chr8 (249-294)||(36103101-36103146)
[»] chr5 (27 HSPs)
chr5 (249-296)||(37722917-37722964)
chr5 (251-296)||(13243516-13243561)
chr5 (249-298)||(40090435-40090484)
chr5 (249-296)||(6634015-6634062)
chr5 (249-296)||(9764338-9764385)
chr5 (249-296)||(15374072-15374119)
chr5 (249-296)||(22303893-22303940)
chr5 (249-296)||(40643929-40643976)
chr5 (251-296)||(2721583-2721628)
chr5 (247-296)||(15804320-15804369)
chr5 (251-296)||(28828369-28828414)
chr5 (251-296)||(28828459-28828504)
chr5 (249-296)||(2316378-2316425)
chr5 (249-296)||(9764450-9764497)
chr5 (249-296)||(16515130-16515177)
chr5 (249-296)||(22766952-22766999)
chr5 (249-296)||(23091963-23092009)
chr5 (249-292)||(25935317-25935360)
chr5 (249-296)||(26281292-26281339)
chr5 (249-296)||(32390084-32390131)
chr5 (250-296)||(3563278-3563324)
chr5 (249-296)||(13243457-13243506)
chr5 (250-296)||(20523245-20523291)
chr5 (250-296)||(33245395-33245441)
chr5 (251-296)||(15804406-15804451)
chr5 (251-296)||(32389974-32390019)
chr5 (249-294)||(41762240-41762285)
[»] chr2 (21 HSPs)
chr2 (249-296)||(17180297-17180344)
chr2 (249-296)||(784905-784952)
chr2 (249-296)||(14365700-14365747)
chr2 (249-296)||(14537199-14537246)
chr2 (249-296)||(41461627-41461674)
chr2 (251-296)||(11532279-11532324)
chr2 (251-292)||(11793897-11793938)
chr2 (251-296)||(41461517-41461562)
chr2 (249-292)||(10480119-10480162)
chr2 (253-296)||(11684603-11684646)
chr2 (249-296)||(14365811-14365858)
chr2 (249-296)||(27033490-27033537)
chr2 (249-296)||(45094497-45094544)
chr2 (250-296)||(30751372-30751418)
chr2 (249-294)||(769036-769081)
chr2 (249-294)||(1583837-1583882)
chr2 (249-294)||(11141305-11141350)
chr2 (249-294)||(17905654-17905699)
chr2 (249-294)||(33189285-33189330)
chr2 (249-294)||(35047707-35047752)
chr2 (251-296)||(44256219-44256263)
[»] chr1 (28 HSPs)
chr1 (249-296)||(8224768-8224815)
chr1 (249-296)||(38277415-38277462)
chr1 (249-298)||(31166310-31166359)
chr1 (251-296)||(40264142-40264187)
chr1 (249-296)||(4038187-4038234)
chr1 (249-296)||(15034771-15034818)
chr1 (249-296)||(23536067-23536114)
chr1 (249-296)||(30190248-30190295)
chr1 (249-296)||(50005079-50005126)
chr1 (250-296)||(32573034-32573080)
chr1 (251-296)||(28632611-28632656)
chr1 (251-296)||(38277527-38277571)
chr1 (251-296)||(50005191-50005236)
chr1 (252-296)||(37036975-37037019)
chr1 (249-296)||(4038075-4038122)
chr1 (249-296)||(10166499-10166546)
chr1 (249-296)||(15034659-15034706)
chr1 (249-292)||(24273250-24273293)
chr1 (249-296)||(26501105-26501152)
chr1 (249-296)||(27935597-27935644)
chr1 (249-296)||(34756427-34756474)
chr1 (249-296)||(43623004-43623051)
chr1 (249-296)||(44410423-44410470)
chr1 (249-279)||(17502198-17502228)
chr1 (251-296)||(28745799-28745844)
chr1 (251-296)||(34756539-34756584)
chr1 (249-293)||(27804380-27804424)
chr1 (252-296)||(45565397-45565441)
[»] scaffold0044 (1 HSPs)
scaffold0044 (253-296)||(56386-56429)
[»] chr7 (21 HSPs)
chr7 (249-296)||(2057507-2057554)
chr7 (249-296)||(29195709-29195756)
chr7 (249-296)||(34398961-34399008)
chr7 (249-292)||(35776971-35777014)
chr7 (249-296)||(40110737-40110784)
chr7 (249-296)||(43955517-43955564)
chr7 (251-296)||(43955626-43955671)
chr7 (249-296)||(2057395-2057442)
chr7 (249-296)||(5644789-5644836)
chr7 (249-296)||(6498777-6498824)
chr7 (249-296)||(21635885-21635932)
chr7 (253-296)||(23455259-23455302)
chr7 (249-296)||(25189238-25189285)
chr7 (249-292)||(26162153-26162196)
chr7 (249-296)||(28539180-28539227)
chr7 (249-292)||(31632722-31632765)
chr7 (249-296)||(44915195-44915242)
chr7 (249-294)||(14603276-14603321)
chr7 (247-280)||(19865564-19865597)
chr7 (249-294)||(35455804-35455849)
chr7 (249-294)||(39342656-39342701)
[»] chr6 (6 HSPs)
chr6 (249-296)||(9285647-9285694)
chr6 (249-296)||(9763124-9763171)
chr6 (249-296)||(6919819-6919866)
chr6 (249-296)||(34245006-34245053)
chr6 (249-294)||(28918165-28918210)
chr6 (249-289)||(33733432-33733472)
[»] scaffold0400 (1 HSPs)
scaffold0400 (250-296)||(4524-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (250-296)||(5168-5214)
[»] scaffold1562 (2 HSPs)
scaffold1562 (251-296)||(517-562)
scaffold1562 (249-296)||(405-452)
[»] scaffold1158 (2 HSPs)
scaffold1158 (251-296)||(2031-2076)
scaffold1158 (249-296)||(2141-2188)
[»] scaffold0129 (1 HSPs)
scaffold0129 (251-296)||(19200-19245)
[»] scaffold0009 (1 HSPs)
scaffold0009 (249-296)||(42090-42137)
[»] scaffold0048 (1 HSPs)
scaffold0048 (251-296)||(82945-82990)


Alignment Details
Target: scaffold0449 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 4088 - 4286
Alignment:
Q  8 tgagatgaaactcatgcaaaggccaagaatgtatactgaaattttctcaatgtcatctttcaagtcctcagaaaggccaagaatgcataccttttggatt 107  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  4088 tgagaagaaactcatgcaaaggccaagaatgcatactgaaattttctcaatgtgatctttcaagtcctgagaaaggccaagaatgcataccttttgggtt 4187  T
Q  108 gtgatagtgatatcatttgtatcagatagccatggtgagggaggagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgag---a 204  Q
    ||||||                      |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  4188 gtgata----------------------gccatggtgagggaagagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgagggaa 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 46429555 - 46429508
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttga 46429508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 9129503 - 9129456
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  9129503 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 9129456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 9137610 - 9137563
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  9137610 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 9137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 47284385 - 47284338
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttga 47284338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 5415942 - 5415893
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatg 5415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 5415783 - 5415830
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgttttga 5415830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 7302346 - 7302393
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttga 7302393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 42006025 - 42005978
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 42005978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 44436258 - 44436305
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 44436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 46672875 - 46672828
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 46672828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 47767432 - 47767479
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 47767479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 49457343 - 49457390
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 49457390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 9129344 - 9129393
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    |||||||||||||||| | || |||||||||| |||||||||||||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatg 9129393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 9137451 - 9137500
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    |||||||||||||||| | || |||||||||| |||||||||||||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatg 9137500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 39215995 - 39215950
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttga 39215950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 53129915 - 53129870
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgtttt 53129870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 46001364 - 46001408
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 293  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgttt 46001408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 27252053 - 27252006
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||| || |||||||| |||||||||||||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgttttga 27252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 31189469 - 31189422
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttga 31189422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 35279970 - 35279927
Alignment:
Q  253 tgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||| |||||| |||||||| |||||||||||||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttga 35279927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 36398061 - 36398014
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttga 36398014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 37054394 - 37054441
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttga 37054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 37321550 - 37321597
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||| |||||||| ||||||||||||||| || ||||||||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttga 37321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 44692822 - 44692869
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttga 44692869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 44692981 - 44692934
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 44692934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 280
Target Start/End: Complemental strand, 47284257 - 47284226
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgagg 280  Q
    ||||||||||||||||||||||||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagg 47284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 42130694 - 42130739
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||| || |||||||||||||||  ||||||||||||||    
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttga 42130739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 26250911 - 26250956
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttga 26250956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 4896648 - 4896695
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttga 4896695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 15660342 - 15660295
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 15660295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 2125857 - 2125904
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttga 2125904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 5715744 - 5715791
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttga 5715791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 7352814 - 7352861
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatg 7352861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 11040968 - 11041014
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  11040968 agagtgtgtttggatg-gggaatattttgagggaatgtaatgttttga 11041014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 15660183 - 15660230
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttga 15660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 41498649 - 41498602
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgttttga 41498602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 49111471 - 49111424
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 49111424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 4896789 - 4896744
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| |||||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttga 4896744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 10127976 - 10128021
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttga 10128021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 42844700 - 42844655
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| |||||||||||||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttga 42844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 1112605 - 1112649
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 293  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttt 1112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 857398 - 857351
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttga 857351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 1107211 - 1107164
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||| |||||||| ||||||||||||||| ||| |||||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttga 1107164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 7352971 - 7352924
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttga 7352924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 14982280 - 14982327
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 14982327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 16516171 - 16516218
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||| | |||||||||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttga 16516218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 31473849 - 31473892
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31473892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 31742923 - 31742876
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 31742876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 36455907 - 36455954
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttga 36455954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 4441338 - 4441384
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 4441384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 42543024 - 42542978
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgat 297  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttgat 42542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 10633035 - 10633075
Alignment:
Q  252 gtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    ||||||||||||| |||||| |||||||| |||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 24044960 - 24045007
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 24045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 3853616 - 3853663
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 3853663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 3858074 - 3858121
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 3858121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 14800119 - 14800072
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttga 14800072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 14991692 - 14991739
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttga 14991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 37268166 - 37268119
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttga 37268119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 4156324 - 4156279
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttga 4156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 13404829 - 13404874
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| |||||||||||||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttga 13404874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 11744802 - 11744759
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||||| |||||||| |||| |||||||||||    
T  11744802 agagtgtgtttggatgagagaatatttagagggaatgtaatgtt 11744759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 17110869 - 17110916
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttga 17110916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 28324745 - 28324698
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 28324698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 31807409 - 31807455
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttga 31807455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 32626117 - 32626070
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||| ||||||| |||||| |||||||| |||||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgttttga 32626070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 33902667 - 33902714
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 33902714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 42711439 - 42711392
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  |||||| |||||||| |||||||||||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgttttga 42711392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 3853773 - 3853731
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttt 293  Q
    |||||||||||||| || |||||||||||| ||||||||||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgttt 3853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 3858231 - 3858189
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttt 293  Q
    |||||||||||||| || |||||||||||| ||||||||||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgttt 3858189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 29257434 - 29257389
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 29257389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 36103101 - 36103146
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 36103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 37722964 - 37722917
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttga 37722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 13243561 - 13243516
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttga 13243516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 40090484 - 40090435
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatg 40090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 6634015 - 6634062
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgttttga 6634062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 9764338 - 9764385
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttga 9764385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 15374119 - 15374072
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 15374072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 22303940 - 22303893
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 22303893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 40643976 - 40643929
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 40643929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 2721628 - 2721583
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 2721583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 15804320 - 15804369
Alignment:
Q  247 tgagagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||    
T  15804320 tgagagtgtgtttggatgggggaatgttttgagggaatgtagtgttttga 15804369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 28828369 - 28828414
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 28828414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 28828504 - 28828459
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| |||||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttga 28828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 2316378 - 2316425
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||| ||||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatattttga 2316425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 9764497 - 9764450
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttga 9764450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 16515177 - 16515130
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgttttga 16515130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 22766952 - 22766999
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttga 22766999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 23091963 - 23092009
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttga 23092009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 25935360 - 25935317
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 25935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 26281339 - 26281292
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttga 26281292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 32390131 - 32390084
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||| || |||| |||||||| |||||||||||||||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgttttga 32390084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 3563278 - 3563324
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttga 3563324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 13243457 - 13243506
Alignment:
Q  249 agagtgtgtttg--gatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttga 13243506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 20523291 - 20523245
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||| |||||| |||||||  |||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttga 20523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 33245441 - 33245395
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttga 33245395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 15804451 - 15804406
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || ||| |||||||| |||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttga 15804406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 32389974 - 32390019
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttga 32390019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 41762285 - 41762240
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 41762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 17180297 - 17180344
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 17180344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 784952 - 784905
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttga 784905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 14365700 - 14365747
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 14365747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 14537199 - 14537246
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 14537246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 41461674 - 41461627
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 41461627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 11532324 - 11532279
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttga 11532279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 11793897 - 11793938
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgtt 11793938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 41461517 - 41461562
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| |||||||||||||||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttga 41461562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 10480119 - 10480162
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10480162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 11684603 - 11684646
Alignment:
Q  253 tgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||| |||||| |||||||| |||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttga 11684646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 14365858 - 14365811
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 14365811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 27033490 - 27033537
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||    
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgttttga 27033537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 45094544 - 45094497
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||| |||||||||| |||||||| ||| |||||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttga 45094497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 30751418 - 30751372
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttga 30751372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 769036 - 769081
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 1583882 - 1583837
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 1583837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 11141305 - 11141350
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 11141350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 17905654 - 17905699
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||| |||||||||||| |||||||  |||||||||||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgtttt 17905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 33189330 - 33189285
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 33189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 35047752 - 35047707
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgtttt 35047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 44256263 - 44256219
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||    
T  44256263 agtgtgtttggatgggggaata-tttgaggtaatgtaatgttttga 44256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 8224768 - 8224815
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 8224815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 38277415 - 38277462
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgttttga 38277462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 31166310 - 31166359
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgatg 298  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatg 31166359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 40264187 - 40264142
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttga 40264142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 4038234 - 4038187
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttga 4038187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 15034818 - 15034771
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 15034771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 23536067 - 23536114
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 23536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 30190295 - 30190248
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 30190248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 50005079 - 50005126
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgttttga 50005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 32573080 - 32573034
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttga 32573034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 28632656 - 28632611
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttga 28632611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 38277571 - 38277527
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||    
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttga 38277527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 50005236 - 50005191
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50005191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 37037019 - 37036975
Alignment:
Q  252 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||| |||||||  |||||||||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttga 37036975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 4038075 - 4038122
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||| || |||||| |||||||| |||||||||||||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttga 4038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 10166499 - 10166546
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| |||| ||||| || |||||||||||||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttga 10166546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 15034659 - 15034706
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 15034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 24273293 - 24273250
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 24273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 26501152 - 26501105
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 26501105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 27935644 - 27935597
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  | |||||||||||| |||||||||||||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgttttga 27935597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 34756427 - 34756474
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttga 34756474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 43623051 - 43623004
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||| | |||||||||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgttttga 43623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 44410470 - 44410423
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||||    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagttttga 44410423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 279
Target Start/End: Original strand, 17502198 - 17502228
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgag 279  Q
    |||||||||||||||||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgag 17502228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 28745799 - 28745844
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttga 28745844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 34756584 - 34756539
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| || |||||||||||| ||| |||||||||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttga 34756539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 27804424 - 27804380
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttt 293  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgttt 27804380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 45565397 - 45565441
Alignment:
Q  252 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttga 45565441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 56429 - 56386
Alignment:
Q  253 tgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttga 56386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 2057554 - 2057507
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttga 2057507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 29195709 - 29195756
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 34399008 - 34398961
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 34398961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 35777014 - 35776971
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 35776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 40110737 - 40110784
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 40110784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 43955517 - 43955564
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 43955564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 43955671 - 43955626
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 43955626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 2057395 - 2057442
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttga 2057442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 5644836 - 5644789
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttga 5644789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 6498824 - 6498777
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 6498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 21635885 - 21635932
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgttttga 21635932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 23455302 - 23455259
Alignment:
Q  253 tgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttga 23455259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 25189285 - 25189238
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||| ||||||||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttga 25189238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 26162196 - 26162153
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 26162153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 28539227 - 28539180
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttga 28539180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 31632722 - 31632765
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtt 292  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31632765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 44915195 - 44915242
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||| |||| |||||||| || ||||||||||||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgttttga 44915242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 14603321 - 14603276
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 14603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Complemental strand, 19865597 - 19865564
Alignment:
Q  247 tgagagtgtgtttggatgagggaatattttgagg 280  Q
    ||||||||||||||||||||||||| ||||||||    
T  19865597 tgagagtgtgtttggatgagggaatgttttgagg 19865564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 35455804 - 35455849
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 35455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 39342701 - 39342656
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgtttt 39342656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 9285647 - 9285694
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 9285694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 9763171 - 9763124
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 9763124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 6919866 - 6919819
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttga 6919819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 34245053 - 34245006
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 34245006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 28918165 - 28918210
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 294  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 28918210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaat 289  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 4570 - 4524
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttga 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 5214 - 5168
Alignment:
Q  250 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttga 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 562 - 517
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 405 - 452
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgttttga 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 2031 - 2076
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 2076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 2188 - 2141
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgttttga 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 19200 - 19245
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttga 19245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 42137 - 42090
Alignment:
Q  249 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttga 42090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 82945 - 82990
Alignment:
Q  251 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 296  Q
    |||||||||||||| | |||| |||||||| |||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttga 82990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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