View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16933_low_18 (Length: 365)

Name: NF16933_low_18
Description: NF16933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16933_low_18
NF16933_low_18
[»] chr8 (60 HSPs)
chr8 (1-351)||(10015177-10015536)
chr8 (1-224)||(1292311-1292534)
chr8 (1-263)||(3303474-3303741)
chr8 (1-265)||(5689368-5689633)
chr8 (4-221)||(40321180-40321398)
chr8 (1-262)||(43036520-43036786)
chr8 (1-265)||(1345178-1345442)
chr8 (1-268)||(41366417-41366685)
chr8 (1-265)||(6599069-6599331)
chr8 (1-265)||(6674522-6674784)
chr8 (1-265)||(4743029-4743285)
chr8 (1-265)||(15212883-15213153)
chr8 (1-265)||(30143437-30143706)
chr8 (35-265)||(19491505-19491735)
chr8 (1-221)||(3073723-3073944)
chr8 (1-225)||(42498291-42498522)
chr8 (1-265)||(4733803-4734073)
chr8 (1-265)||(12702433-12702705)
chr8 (1-265)||(4731755-4732024)
chr8 (4-190)||(18141920-18142105)
chr8 (1-221)||(33352247-33352473)
chr8 (2-225)||(27811376-27811605)
chr8 (3-242)||(34254155-34254400)
chr8 (1-242)||(17982750-17982997)
chr8 (1-242)||(34256331-34256578)
chr8 (1-225)||(1746060-1746290)
chr8 (84-225)||(18105917-18106058)
chr8 (1-225)||(44303952-44304182)
chr8 (1-265)||(8965494-8965762)
chr8 (4-151)||(30291707-30291856)
chr8 (1-225)||(19945200-19945430)
chr8 (1-242)||(31218354-31218601)
chr8 (104-265)||(3050927-3051090)
chr8 (1-227)||(2627833-2628068)
chr8 (1-81)||(42434981-42435062)
chr8 (82-225)||(8153966-8154107)
chr8 (1-81)||(4283621-4283702)
chr8 (1-81)||(18655497-18655578)
chr8 (3-80)||(3772291-3772369)
chr8 (2-198)||(7597713-7597909)
chr8 (1-225)||(29796170-29796391)
chr8 (1-265)||(11711807-11712071)
chr8 (2-81)||(10930188-10930269)
chr8 (213-271)||(26287709-26287765)
chr8 (213-271)||(26312960-26313016)
chr8 (101-226)||(32902027-32902151)
chr8 (4-65)||(40221845-40221907)
chr8 (1-81)||(8153855-8153936)
chr8 (2-81)||(11384083-11384163)
chr8 (1-65)||(18106087-18106150)
chr8 (213-265)||(31071463-31071514)
chr8 (1-75)||(4162594-4162668)
chr8 (213-248)||(18870797-18870832)
chr8 (213-248)||(30655465-30655500)
chr8 (215-249)||(1262188-1262222)
chr8 (213-265)||(28307370-28307419)
chr8 (213-265)||(26300960-26301010)
chr8 (213-242)||(33038044-33038073)
chr8 (126-196)||(4162692-4162759)
chr8 (1-81)||(40328877-40328954)
[»] chr3 (60 HSPs)
chr3 (1-271)||(29196185-29196457)
chr3 (4-265)||(32891204-32891456)
chr3 (4-265)||(23391714-23391977)
chr3 (4-262)||(44700289-44700546)
chr3 (4-265)||(9666272-9666534)
chr3 (4-242)||(31314545-31314784)
chr3 (1-265)||(22834809-22835073)
chr3 (1-261)||(39153170-39153432)
chr3 (1-265)||(760944-761209)
chr3 (1-243)||(7762362-7762611)
chr3 (5-265)||(27305521-27305777)
chr3 (70-265)||(21350813-21351004)
chr3 (1-224)||(16499126-16499340)
chr3 (1-248)||(19683706-19683960)
chr3 (1-225)||(40735480-40735709)
chr3 (1-265)||(29810965-29811235)
chr3 (3-265)||(2074885-2075144)
chr3 (6-265)||(23410133-23410395)
chr3 (1-265)||(40734595-40734863)
chr3 (1-265)||(29813160-29813428)
chr3 (1-265)||(7764561-7764832)
chr3 (1-270)||(5236254-5236527)
chr3 (1-265)||(51398911-51399180)
chr3 (1-242)||(9581379-9581627)
chr3 (1-225)||(5260164-5260394)
chr3 (1-242)||(29682456-29682700)
chr3 (1-152)||(53921422-53921574)
chr3 (1-225)||(5257985-5258215)
chr3 (1-225)||(37408555-37408786)
chr3 (61-270)||(51351938-51352143)
chr3 (1-242)||(9635948-9636197)
chr3 (4-179)||(32744335-32744504)
chr3 (1-225)||(45095260-45095490)
chr3 (1-81)||(6095589-6095670)
chr3 (125-221)||(9634666-9634763)
chr3 (1-122)||(33191928-33192050)
chr3 (1-65)||(34491309-34491374)
chr3 (1-81)||(54593801-54593882)
chr3 (1-81)||(4570049-4570131)
chr3 (1-81)||(55301961-55302043)
chr3 (3-65)||(44331644-44331707)
chr3 (1-81)||(30236222-30236304)
chr3 (1-65)||(43403749-43403815)
chr3 (1-81)||(46860571-46860653)
chr3 (213-265)||(1305763-1305813)
chr3 (213-265)||(1309668-1309718)
chr3 (213-265)||(32143135-32143185)
chr3 (1-65)||(40913390-40913455)
chr3 (1-61)||(46173454-46173515)
chr3 (1-65)||(47304348-47304413)
chr3 (213-249)||(2671824-2671860)
chr3 (213-249)||(8477188-8477224)
chr3 (1-221)||(23199982-23200209)
chr3 (1-89)||(801189-801280)
chr3 (1-99)||(23197908-23198010)
chr3 (1-65)||(43401806-43401872)
chr3 (1-65)||(49199474-49199540)
chr3 (213-242)||(8739302-8739331)
chr3 (213-242)||(9091540-9091569)
chr3 (213-249)||(40373033-40373069)
[»] chr4 (63 HSPs)
chr4 (4-265)||(46147197-46147459)
chr4 (1-265)||(26175438-26175707)
chr4 (4-267)||(52467157-52467422)
chr4 (1-264)||(47038219-47038482)
chr4 (4-265)||(36463198-36463457)
chr4 (1-265)||(45686989-45687253)
chr4 (4-265)||(48893445-48893706)
chr4 (1-265)||(12743730-12743996)
chr4 (4-225)||(6542028-6542247)
chr4 (1-265)||(31474248-31474510)
chr4 (1-265)||(12739355-12739621)
chr4 (1-197)||(36994621-36994817)
chr4 (1-268)||(37229528-37229792)
chr4 (1-265)||(56178438-56178708)
chr4 (4-225)||(5871920-5872144)
chr4 (1-265)||(9927260-9927529)
chr4 (1-265)||(4588056-4588318)
chr4 (4-225)||(29254594-29254819)
chr4 (1-261)||(34570220-34570485)
chr4 (1-265)||(37740722-37740992)
chr4 (1-242)||(48143140-48143392)
chr4 (39-265)||(24969801-24970028)
chr4 (1-242)||(5369906-5370154)
chr4 (4-265)||(52095164-52095430)
chr4 (1-223)||(5207693-5207913)
chr4 (1-208)||(5429776-5429989)
chr4 (1-265)||(54199710-54199977)
chr4 (1-122)||(21703784-21703906)
chr4 (1-122)||(51337161-51337283)
chr4 (75-270)||(52082460-52082659)
chr4 (1-81)||(41964513-41964594)
chr4 (1-225)||(13992132-13992364)
chr4 (1-81)||(6656053-6656134)
chr4 (1-81)||(40632542-40632623)
chr4 (1-81)||(50673837-50673918)
chr4 (40-155)||(29056496-29056610)
chr4 (1-157)||(29999720-29999877)
chr4 (1-81)||(8648236-8648317)
chr4 (1-115)||(12745266-12745385)
chr4 (1-81)||(41639523-41639604)
chr4 (49-265)||(5350055-5350266)
chr4 (39-267)||(48142186-48142408)
chr4 (104-203)||(3913782-3913878)
chr4 (1-81)||(8665505-8665586)
chr4 (1-81)||(12073489-12073571)
chr4 (3-81)||(379479-379559)
chr4 (49-156)||(39593647-39593754)
chr4 (1-65)||(2209811-2209877)
chr4 (1-62)||(27416974-27417036)
chr4 (1-62)||(35662538-35662600)
chr4 (1-81)||(46703598-46703680)
chr4 (1-81)||(54883117-54883199)
chr4 (1-98)||(3913545-3913642)
chr4 (213-265)||(28468761-28468811)
chr4 (213-248)||(24741765-24741800)
chr4 (187-242)||(29999653-29999708)
chr4 (1-89)||(31495296-31495387)
chr4 (1-62)||(13009453-13009515)
chr4 (1-65)||(50262706-50262772)
chr4 (217-265)||(31985871-31985917)
chr4 (213-242)||(34496057-34496086)
chr4 (194-242)||(1983515-1983562)
chr4 (70-122)||(37754908-37754960)
[»] chr1 (76 HSPs)
chr1 (1-265)||(16455718-16455982)
chr1 (1-265)||(23555073-23555336)
chr1 (1-225)||(50167021-50167246)
chr1 (7-265)||(40122003-40122261)
chr1 (1-265)||(833972-834238)
chr1 (2-265)||(13137782-13138046)
chr1 (1-265)||(45644160-45644425)
chr1 (1-265)||(28223223-28223492)
chr1 (4-261)||(28265365-28265622)
chr1 (1-242)||(50169039-50169281)
chr1 (1-265)||(46065015-46065276)
chr1 (1-265)||(28220028-28220297)
chr1 (1-225)||(3846962-3847192)
chr1 (1-266)||(15820404-15820660)
chr1 (1-225)||(3156962-3157192)
chr1 (1-225)||(196751-196979)
chr1 (1-261)||(4552454-4552708)
chr1 (1-265)||(30476248-30476517)
chr1 (1-265)||(13659153-13659407)
chr1 (1-270)||(8550581-8550858)
chr1 (35-265)||(41361046-41361276)
chr1 (1-265)||(10925323-10925588)
chr1 (4-265)||(37559666-37559936)
chr1 (40-265)||(927787-928007)
chr1 (75-265)||(1833685-1833874)
chr1 (1-242)||(49918447-49918694)
chr1 (1-172)||(3189427-3189604)
chr1 (1-172)||(3198244-3198421)
chr1 (1-172)||(3207083-3207260)
chr1 (3-265)||(31659337-31659604)
chr1 (96-242)||(8870551-8870698)
chr1 (1-242)||(20762769-20763012)
chr1 (1-265)||(37503364-37503628)
chr1 (1-265)||(44455257-44455526)
chr1 (1-226)||(44646654-44646875)
chr1 (1-224)||(13316194-13316423)
chr1 (1-226)||(44650012-44650233)
chr1 (1-115)||(36683777-36683892)
chr1 (1-81)||(193708-193789)
chr1 (1-81)||(13547079-13547160)
chr1 (1-81)||(13548990-13549071)
chr1 (1-81)||(37168395-37168476)
chr1 (1-201)||(5460003-5460203)
chr1 (8-265)||(37282500-37282755)
chr1 (1-77)||(11348795-11348872)
chr1 (1-81)||(31925697-31925778)
chr1 (4-99)||(8871034-8871130)
chr1 (1-166)||(51765494-51765666)
chr1 (3-122)||(3460796-3460915)
chr1 (3-197)||(2262850-2263043)
chr1 (1-65)||(37033077-37033143)
chr1 (1-81)||(47255329-47255411)
chr1 (172-240)||(36683883-36683951)
chr1 (53-122)||(16914124-16914193)
chr1 (1-61)||(19752783-19752844)
chr1 (1-80)||(29136344-29136425)
chr1 (1-81)||(37876756-37876837)
chr1 (2-77)||(47115270-47115347)
chr1 (7-81)||(28242407-28242483)
chr1 (1-79)||(7482222-7482301)
chr1 (1-65)||(19754592-19754657)
chr1 (1-61)||(34603674-34603735)
chr1 (213-249)||(24203002-24203038)
chr1 (1-65)||(9987298-9987364)
chr1 (194-240)||(32889274-32889320)
chr1 (1-65)||(42297980-42298046)
chr1 (174-263)||(3189620-3189708)
chr1 (174-263)||(3198437-3198525)
chr1 (174-263)||(3207276-3207364)
chr1 (13-109)||(43342270-43342367)
chr1 (213-249)||(19359080-19359116)
chr1 (213-249)||(19361670-19361706)
chr1 (213-249)||(19380310-19380346)
chr1 (4-89)||(20622217-20622305)
chr1 (207-265)||(29651622-29651679)
chr1 (4-89)||(40282477-40282565)
[»] chr5 (47 HSPs)
chr5 (1-267)||(538122-538389)
chr5 (1-265)||(42926988-42927258)
chr5 (1-260)||(42428237-42428501)
chr5 (1-265)||(8565750-8566017)
chr5 (1-270)||(42426032-42426306)
chr5 (1-265)||(533866-534125)
chr5 (1-265)||(13488300-13488567)
chr5 (1-265)||(31183068-31183339)
chr5 (1-265)||(28750457-28750726)
chr5 (4-267)||(32636924-32637192)
chr5 (1-225)||(13239848-13240078)
chr5 (1-265)||(30682724-30682993)
chr5 (1-265)||(33831777-33832044)
chr5 (1-226)||(16452177-16452403)
chr5 (1-225)||(37439238-37439467)
chr5 (4-265)||(19806463-19806727)
chr5 (1-265)||(39468350-39468620)
chr5 (41-265)||(5887237-5887464)
chr5 (45-225)||(16649676-16649856)
chr5 (1-242)||(36073867-36074114)
chr5 (1-225)||(13343157-13343387)
chr5 (1-225)||(25412857-25413087)
chr5 (1-122)||(13695639-13695761)
chr5 (1-225)||(30182685-30182915)
chr5 (1-211)||(9049210-9049413)
chr5 (4-102)||(3075627-3075726)
chr5 (1-91)||(28278413-28278504)
chr5 (1-81)||(213562-213644)
chr5 (1-81)||(5058142-5058223)
chr5 (1-227)||(26177979-26178215)
chr5 (187-265)||(3075551-3075629)
chr5 (4-81)||(16640930-16641008)
chr5 (1-65)||(40147358-40147423)
chr5 (1-225)||(16409572-16409806)
chr5 (159-264)||(42309827-42309931)
chr5 (1-165)||(26170859-26171032)
chr5 (1-81)||(27015620-27015701)
chr5 (53-121)||(30897563-30897631)
chr5 (1-65)||(9789229-9789295)
chr5 (49-107)||(30793282-30793340)
chr5 (213-265)||(15464345-15464395)
chr5 (4-89)||(10593358-10593446)
chr5 (1-65)||(18441653-18441719)
chr5 (213-265)||(24135661-24135711)
chr5 (7-81)||(27637602-27637678)
chr5 (213-249)||(35387490-35387526)
chr5 (213-265)||(40147556-40147608)
[»] chr7 (69 HSPs)
chr7 (1-265)||(41317240-41317505)
chr7 (1-265)||(36146214-36146479)
chr7 (1-265)||(31105202-31105464)
chr7 (1-265)||(14069635-14069904)
chr7 (1-265)||(14379663-14379932)
chr7 (5-265)||(47675938-47676203)
chr7 (1-262)||(47673749-47674014)
chr7 (1-265)||(38671027-38671293)
chr7 (1-265)||(41648816-41649082)
chr7 (1-221)||(24525351-24525573)
chr7 (1-225)||(8153439-8153664)
chr7 (1-221)||(495833-496054)
chr7 (1-265)||(23555137-23555408)
chr7 (1-265)||(19502275-19502545)
chr7 (1-232)||(23564903-23565132)
chr7 (1-265)||(1113754-1114019)
chr7 (4-265)||(26417416-26417683)
chr7 (3-263)||(43864343-43864609)
chr7 (1-265)||(31518999-31519256)
chr7 (1-265)||(4586258-4586528)
chr7 (1-265)||(48489528-48489797)
chr7 (1-265)||(31732770-31733040)
chr7 (1-226)||(4253375-4253599)
chr7 (1-265)||(18126741-18127013)
chr7 (1-225)||(23344072-23344292)
chr7 (1-242)||(25615950-25616199)
chr7 (1-242)||(29991150-29991397)
chr7 (1-226)||(36574363-36574586)
chr7 (1-265)||(48491676-48491942)
chr7 (1-225)||(27347914-27348144)
chr7 (8-149)||(12097789-12097931)
chr7 (1-225)||(35854011-35854243)
chr7 (109-211)||(30024612-30024714)
chr7 (1-81)||(32358044-32358125)
chr7 (1-225)||(48408901-48409134)
chr7 (3-88)||(22270072-22270158)
chr7 (1-225)||(25766798-25767031)
chr7 (1-166)||(39731466-39731638)
chr7 (49-226)||(40808734-40808910)
chr7 (1-81)||(4508696-4508777)
chr7 (2-81)||(3259093-3259173)
chr7 (1-137)||(2759127-2759268)
chr7 (75-242)||(4178946-4179117)
chr7 (1-81)||(8359305-8359387)
chr7 (1-65)||(30814533-30814598)
chr7 (1-77)||(48599328-48599405)
chr7 (4-121)||(26639425-26639544)
chr7 (1-81)||(6359941-6360023)
chr7 (4-65)||(6432071-6432133)
chr7 (1-65)||(34310721-34310787)
chr7 (1-155)||(43504063-43504225)
chr7 (33-98)||(5513640-5513705)
chr7 (1-81)||(29608834-29608915)
chr7 (4-89)||(1560646-1560734)
chr7 (7-81)||(2390385-2390461)
chr7 (147-211)||(12097020-12097084)
chr7 (4-65)||(20343997-20344059)
chr7 (1-81)||(4510538-4510619)
chr7 (1-81)||(4512380-4512461)
chr7 (213-265)||(18408578-18408628)
chr7 (213-249)||(1533678-1533714)
chr7 (4-63)||(30024740-30024800)
chr7 (61-120)||(3904418-3904477)
chr7 (213-248)||(20357785-20357820)
chr7 (213-242)||(3047085-3047114)
chr7 (1-72)||(18396415-18396488)
chr7 (213-265)||(18413455-18413505)
chr7 (213-265)||(6430442-6430494)
chr7 (213-249)||(21645834-21645870)
[»] chr2 (52 HSPs)
chr2 (1-270)||(34139570-34139841)
chr2 (1-265)||(723549-723815)
chr2 (1-265)||(33162256-33162521)
chr2 (1-265)||(39284933-39285200)
chr2 (1-225)||(11067402-11067627)
chr2 (1-265)||(36317815-36318080)
chr2 (6-265)||(11151397-11151657)
chr2 (4-265)||(36773662-36773924)
chr2 (1-242)||(14633652-14633896)
chr2 (1-265)||(2334220-2334489)
chr2 (1-265)||(36987877-36988147)
chr2 (1-265)||(42362449-42362711)
chr2 (1-242)||(11049651-11049888)
chr2 (1-259)||(38312337-38312600)
chr2 (4-265)||(29867969-29868235)
chr2 (1-265)||(17057171-17057440)
chr2 (1-265)||(17085154-17085423)
chr2 (83-265)||(24885770-24885951)
chr2 (4-265)||(6594806-6595074)
chr2 (52-221)||(14202269-14202440)
chr2 (4-265)||(11690601-11690854)
chr2 (1-225)||(45099851-45100081)
chr2 (85-225)||(2838132-2838272)
chr2 (1-223)||(26353281-26353495)
chr2 (49-224)||(12123434-12123607)
chr2 (1-225)||(36205506-36205736)
chr2 (1-242)||(5723080-5723327)
chr2 (39-166)||(1345602-1345730)
chr2 (1-224)||(4502975-4503204)
chr2 (1-123)||(17490096-17490219)
chr2 (1-114)||(7815231-7815344)
chr2 (1-265)||(13121864-13122124)
chr2 (1-225)||(4484169-4484401)
chr2 (1-81)||(35446874-35446955)
chr2 (1-65)||(45727026-45727091)
chr2 (1-166)||(30833443-30833615)
chr2 (1-80)||(42288101-42288181)
chr2 (9-122)||(28672036-28672151)
chr2 (1-120)||(42019821-42019941)
chr2 (1-61)||(17450675-17450735)
chr2 (1-62)||(1631741-1631803)
chr2 (1-81)||(33648269-33648351)
chr2 (78-120)||(41446315-41446357)
chr2 (213-265)||(3491565-3491615)
chr2 (1-81)||(7451215-7451295)
chr2 (213-249)||(9296639-9296675)
chr2 (207-242)||(21629784-21629819)
chr2 (134-224)||(36191103-36191192)
chr2 (53-122)||(7596960-7597029)
chr2 (3-48)||(42412117-42412162)
chr2 (213-249)||(14291311-14291347)
chr2 (1-63)||(24398155-24398219)
[»] chr6 (35 HSPs)
chr6 (75-267)||(3038727-3038919)
chr6 (1-225)||(9182872-9183102)
chr6 (1-225)||(16569119-16569347)
chr6 (1-265)||(26954093-26954357)
chr6 (1-265)||(28137213-28137479)
chr6 (39-265)||(14521480-14521710)
chr6 (1-196)||(33211060-33211256)
chr6 (1-225)||(33160192-33160423)
chr6 (1-242)||(5408894-5409140)
chr6 (1-242)||(5413219-5413465)
chr6 (1-225)||(31404516-31404746)
chr6 (1-225)||(16452169-16452400)
chr6 (1-242)||(5406027-5406271)
chr6 (1-242)||(5410352-5410596)
chr6 (1-225)||(30834375-30834607)
chr6 (1-81)||(21589028-21589109)
chr6 (1-81)||(21593761-21593842)
chr6 (1-225)||(2171368-2171603)
chr6 (51-157)||(4045566-4045671)
chr6 (1-81)||(26830113-26830194)
chr6 (1-81)||(5043724-5043806)
chr6 (1-81)||(2972929-2973010)
chr6 (49-122)||(12221053-12221126)
chr6 (1-65)||(6097456-6097522)
chr6 (1-81)||(17763087-17763169)
chr6 (213-249)||(5675005-5675041)
chr6 (7-81)||(26800690-26800766)
chr6 (1-89)||(3072739-3072830)
chr6 (1-65)||(412199-412265)
chr6 (4-65)||(603094-603156)
chr6 (1-61)||(3808717-3808779)
chr6 (1-81)||(17758120-17758202)
chr6 (213-242)||(30126032-30126061)
chr6 (213-265)||(602905-602957)
chr6 (7-81)||(22424815-22424891)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-265)||(148914-149168)
[»] scaffold0066 (1 HSPs)
scaffold0066 (4-265)||(20218-20483)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-225)||(114699-114930)
[»] scaffold1668 (1 HSPs)
scaffold1668 (75-265)||(1303-1494)
[»] scaffold0219 (1 HSPs)
scaffold0219 (3-265)||(27252-27511)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-166)||(434630-434801)
[»] scaffold0236 (1 HSPs)
scaffold0236 (4-81)||(10589-10667)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-166)||(1012-1183)
[»] scaffold0491 (2 HSPs)
scaffold0491 (4-166)||(8634-8803)
scaffold0491 (4-166)||(11060-11229)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-116)||(11654-11777)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-81)||(7424-7505)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-81)||(17993-18075)
[»] scaffold0978 (1 HSPs)
scaffold0978 (213-249)||(475-511)
[»] scaffold0674 (1 HSPs)
scaffold0674 (4-65)||(3731-3794)
[»] scaffold0188 (1 HSPs)
scaffold0188 (213-249)||(24279-24315)


Alignment Details
Target: chr8 (Bit Score: 312; Significance: 1e-176; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 10015177 - 10015536
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10015177 tcattgatagtggattggagagataaatctctctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 10015276  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10015277 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgttcactttgatattggtt 10015376  T
Q  201 attactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa---------taaataacttaaagaatctgtaagtg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||    
T  10015377 attactttcctctgctccacacatctttgttttcattggtgtaagttttaaatccgaattcacaacagaatctttaaataacttaaagaatctgtaagtg 10015476  T
Q  292 tacttaaaaactaatccgaaaaaccaacttgttataattaaataacctcttgtccaattt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10015477 tacttaaaaactaatccgaaaaaccaacttgttataattaaataacctcttgtccaattt 10015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1292534 - 1292311
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    |||||||||||||||| |||| |||||||| || ||| |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  1292534 tcattgatagtggatttgagaaataaatctctccccagagtaggtcaagttggaccgaactgggcaaacatttcttggtgtgtttgtttctcttctctcc 1292435  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    |||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||| |||||||| |||||  | ||||||||| ||||||||||| ||    
T  1292434 ttatcttttgctcgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgttactacttgtgtttactttgatattgttt 1292335  T
Q  201 attactttcctctgctccacacat 224  Q
    | |||||| || |||||| |||||    
T  1292334 actacttttctttgctccccacat 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 3303741 - 3303474
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| |||||| ||||| || || | ||||||||||||||||||||||||||||| || |  ||||||| |||||||||||||||||    
T  3303741 tcattgatagtggattgaagagatcaatctctcccccacagtaggtcaagttggaccgaactgggtaaacaatctttggtgtgtttgtttctcttctctc 3303642  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgatta----ctaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
     |||||||||||||||| ||||| ||||||||||||||||     ||| ||||||||||||| | |||||||||||| ||||||||||||| ||||||||    
T  3303641 tttatcttttgcttgtgattttgtacttttcactttgattgattcctagattagatctaggtgtagttattattgttgttgcttgtgtttgttttgatat 3303542  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 263  Q
    ||||||  |||||||| ||||||||||||| | ||||  |||||||| || ||||| |||||||||||    
T  3303541 tggttaccactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 5689368 - 5689633
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | | ||||||||||||||||||||||| | || |  ||| ||| |||||||||||||||||    
T  5689368 tcattgatagtggattggagagatcaatctctcccccagatttggtcaagttggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctc 5689467  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||| ||||||||||||||||||    
T  5689468 tttatcttttacttgtggttttgagcttttcactttgattactaaattagatttagatgttgttattattgttgttgcttgttgtttgctttgatattgg 5689567  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| || ||||||||||    
T  5689568 ttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcggaattcacaa 5689633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 40321180 - 40321398
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||| ||| ||||||||||||||||| ||    
T  40321180 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctcttt 40321279  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||      
T  40321280 atcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattgattgc 40321379  T
Q  203 tactttcctctgctccaca 221  Q
    ||||||||| |||||||||    
T  40321380 tactttcctttgctccaca 40321398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43036520 - 43036786
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||| ||||||| ||||| || |||| | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  43036520 tcattgatagtggatttgagagatcaatctctcctccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 43036619  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||  |||| |||||||| |||||||||||| |||||| ||    
T  43036620 tccctttatcttttgcttgtggttttgagcttttcactttggttactagattagatctaggtggtgttgttattgttgttgcttgtgtttactttgaaat 43036719  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattca 262  Q
    |||||| ||||||||| ||||||||||||| || |||  |||||||| |||||||| ||| ||||||    
T  43036720 tggttactactttcctttgctccacacatcattttttgtattggtgtgagttttgagtccaaattca 43036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 1345442 - 1345178
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| |||| | ||||| || || | ||||||||||||| ||||||||| ||| | || |  ||||||| |||||||||||||||||    
T  1345442 tcattgatagtggattgaagagttcaatctctcccccagagtaggtcaagttagaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctc 1345343  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||||| |||||||||||||    
T  1345342 tttatcttttgcttgtgattttgagattttcactttgattactagattagatctaggtgttattattattgttgttgtttgtgtttactttgatattggt 1345243  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||||| ||  ||||||  ||| |||| | ||||||||||||||||||||    
T  1345242 tactactttcctttgctccacagattattgtttgtatttgtgtga-ttttgaatccgaattcacaa 1345178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 41366685 - 41366417
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt-atttgtttctcttctctc 99  Q
    ||||| |||||||||||||||||| ||||| || | | | ||||||||||||||||||||||||  | || |  |||||||  ||||||||||||||| |    
T  41366685 tcatttatagtggattggagagatcaatctctccctagattaggtcaagttggaccgaactgggacaacaatctttggtgtgttttgtttctcttctccc 41366586  T
Q  100 -cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
      |||||||||| |||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  41366585 atttatcttttgtttgtggttttgtgcttttcactttgattcctatattagatctaggtgttgttattgttgttattgcttgtgtttactttgatattgg 41366486  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataa 268  Q
    ||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||||||||||||||    
T  41366485 ttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaataa 41366417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 6599069 - 6599331
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtattt-gtttctcttctct 98  Q
    |||||||||||||||| ||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| ||| ||||||||||||     
T  6599069 tcattgatagtggattagagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttttgtttctcttctcc 6599168  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||   ||| |||||||  ||||||||||||    
T  6599169 ctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattg---ttgtttgtgttcactttgatattgg 6599265  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||| ||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  6599266 ttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 6599331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 6674522 - 6674784
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtattt-gtttctcttctct 98  Q
    |||||||||||||||| ||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| ||| ||||||||||||     
T  6674522 tcattgatagtggattagagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttttgtttctcttctcc 6674621  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||   ||| |||||||  ||||||||||||    
T  6674622 ctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattg---ttgtttgtgttcactttgatattgg 6674718  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||| ||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  6674719 ttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 6674784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 4743285 - 4743029
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||||||||| | || |  ||||||| |||||||||||||||||    
T  4743285 tcattgatagtggattggagagatcaatctctcccccaaagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctc 4743186  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||| |||||||||||||  ||||||||||||||| ||| ||||||||||||| ||||||         |||||||||||| ||||| |||||||    
T  4743185 tttatctttcgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgtta---------ttgcttgtgtttactttggtattggt 4743095  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||  |||||||| ||||||||||||  | ||||  |||||||| || ||||| |||||||||||||    
T  4743094 taccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaa 4743029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 15212883 - 15213153
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||| |||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  15212883 tcattgataatggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 15212982  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||| ||||  ||||||||||||||| ||| |||||||| ||||  ||||||| ||| || ||| |||||||  ||||||||    
T  15212983 tccctttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatcaaggtgctgttattgttgattattgtttgtgttcactttgata 15213082  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  15213083 ttggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 15213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 30143437 - 30143706
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | |  ||||||||||| || |||||| || | || |  ||||||| ||||||  |||||||||    
T  30143437 tcattgatagtggattggagagatcaatctctcccccagataaggtcaagttgaactgaactgagtcaacaatctttggtgtgtttgttcctctcttctc 30143536  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  ||||||||    
T  30143537 tccctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgata 30143636  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| || ||||||||||    
T  30143637 ttggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaa 30143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 35 - 265
Target Start/End: Complemental strand, 19491735 - 19491505
Alignment:
Q  35 ccatagtaggtcaagttggaccgaactgggtaatcatt-tcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcact 133  Q
    |||||||||||||  |||||||||||| ||| | || | ||||||||| ||||||||| ||||| | |||||||||| |||||||||||| ||||| |||    
T  19491735 ccatagtaggtcatattggaccgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttact 19491636  T
Q  134 ttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgtttt 233  Q
    |||||| ||| ||||||| ||||| |||||||| ||||| || ||||||||| ||||||||||| ||| ||||||||| ||||||||||||| | |||||    
T  19491635 ttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagtttt 19491536  T
Q  234 cattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||   |||||||| |||||||||||||    
T  19491535 -attggttagagttttgagtccgaattcacaa 19491505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3073944 - 3073723
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    ||||||||| ||| |||||||||| ||||| || ||||||||||||||||||| ||||||||||||| |||||||  |||| |||||||||||| ||||     
T  3073944 tcattgataatggcttggagagatcaatctctccccatagtaggtcaagttgggccgaactgggtaaacatttctatgtgtgtttgtttctcttatctct 3073845  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgc---ttgtgtttgctttgatattg 197  Q
    |||||||||||||||||||||| ||| |||||||| ||| ||| |||| |||||||| ||||| || |||||  |||   ||||| || |||||||| ||    
T  3073844 ttatcttttgcttgtggttttgtactcttcacttt-attcctagattaaatctaggt-ttgttgttgttgttgctgctcattgtggttactttgatactg 3073747  T
Q  198 gttattactttcctctgctccaca 221  Q
    |||||||||||||| |||||||||    
T  3073746 gttattactttcctttgctccaca 3073723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42498291 - 42498522
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttc--tcttct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| ||||||||  ||||||    
T  42498291 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttccctcttct 42498390  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattatt-gtttttgcttgtgtttgctttgat 193  Q
    ||||||  ||||||||||||||||||||   |||||||||||||| ||| ||||||||||||| |||||||| ||  || |||||||||||  |||||||    
T  42498391 ctccttttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgttaattattgcttgtgttcactttgat 42498490  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||  ||||||||| |||||||||||||    
T  42498491 attggttgctactttcctttgctccacacatc 42498522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 4733803 - 4734073
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||||||||||||||||||  |||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  4733803 tcattgatagtggattggagagatcgatctctcccccagattaggtcaagttggaccgaactgggtcaacagtctttggtgtgtttgttcctctcttctc 4733902  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    | |  ||||||||| ||||||||||||  ||||||| |||| || ||| ||| ||||||||| |||||||| ||| || |||||||||||   |||||||    
T  4733903 tacctttatcttttccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttgattattgcttgtgttcattttgata 4734002  T
Q  195 ttggttattactttcctctgctccacacatc-tttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| || ||||  |||||||||| ||||||||||||||||||||    
T  4734003 ttggttactactttcctttgctccacacatcattggtttgtattggtgtaa-ttttgaatccgaattcacaa 4734073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 12702705 - 12702433
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||| |||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||| | |||||||||||  ||||    
T  12702705 tcattgatattggattggagagatcaatctctcccctagattaggtcaagttggaccgaactgggtcaacaatctttggtatgtttgtttctctcttctc 12702606  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgatta-ctaaattagatctaggtat---tgttattattgtttttgcttgtgtttgctttg 191  Q
    |||  ||||||| ||||||||||||||   ||||||||||||||  ||| ||||||||||||| |   ||||||||||||| |||||||||||| |||||    
T  12702605 tccctttatcttgtgcttgtggttttgtgtttttcactttgattttctagattagatctaggtgtcgttgttattattgttgttgcttgtgtttactttg 12702506  T
Q  192 atattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||| ||||||||| ||||||||||||| | ||||  |||| ||| | |||||| |||||||||||||    
T  12702505 atattggttactactttcctttgctccacacatcatagtttgtattgatgtga-ttttgagtccgaattcacaa 12702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 4731755 - 4732024
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||||||||||||||||||  |||| || || | | | ||||||||||||||||| ||||| | || |  ||||||| ||||||  |||||||||    
T  4731755 tcattgatagtggattggagagatcgatctctcccccagattcggtcaagttggaccgaattgggtcaacaatctttggtgtgtttgttcctctcttctc 4731854  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||    
T  4731855 tccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgata 4731954  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | ||||| ||||||||| ||||||||||||| ||||||  |||||||| | |||||| | |||||||||||    
T  4731955 tcggttactactttcctttgctccacacatcattgtttgtattggtgtga-ttttgagttcgaattcacaa 4732024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 18141920 - 18142105
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | |||||||||||||||| |||||||  | || ||  ||||||  |||||||||| ||||| ||    
T  18141920 ttgatagtggattggagagatcaatctctcccctagattaggtcaagttggaccaaactgggccaacactt--tggtgtgcttgtttctctgctctcttt 18142017  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgcttt 190  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||| || |||||||||||| ||||    
T  18142018 atcttttgcttgtggttttgagcttttcactttgattactagattagatgtaggtgttgttattattattgttgcttgtgtttacttt 18142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33352247 - 33352473
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||| ||| ||||||  |||||| ||    
T  33352247 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttatc 33352346  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |||||  ||||||||||||||| ||||   |||||||||||||| ||| ||||||| ||||| |||||||| ||| || |||||||||||  ||||||||    
T  33352347 tccttttatcttttgcttgtggatttgtgtttttcactttgatttctagattagatttaggtgttgttattgttgattattgcttgtgttcactttgata 33352446  T
Q  195 ttggttattactttcctctgctccaca 221  Q
    ||||||||||||||||| |||||||||    
T  33352447 ttggttattactttcctttgctccaca 33352473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 27811376 - 27811605
Alignment:
Q  2 cattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttc--tcttctct 98  Q
    |||||||||||||||| |||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||| || |  ||||||||    
T  27811376 cattgatagtggattgaagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttttttcccctcttctct 27811475  T
Q  99 --ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatat 195  Q
      | |||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||| |||||||| ||| || |||||||||||  |||||||||    
T  27811476 tgctttatcttttgcttgtgattttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatat 27811575  T
Q  196 tggttattactttcctctgctccacacatc 225  Q
    |||||| ||||||||| | |||||||||||    
T  27811576 tggttactactttcctttcctccacacatc 27811605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 34254400 - 34254155
Alignment:
Q  3 attgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctct 98  Q
    |||||||||||||||||||||| ||||| || || | ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||||    
T  34254400 attgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctct 34254301  T
Q  99 cctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgatat 195  Q
    ||||  |||||||||||||||||| |  |||||| |||||||| ||| |||||||||||||  ||||||| ||| || ||||||||| |  |||||||||    
T  34254300 ccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatat 34254202  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  34254201 tggttactactttcctttgctccacacatcatagtttgtattggtgt 34254155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 17982750 - 17982997
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  17982750 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 17982849  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||| |    
T  17982850 ctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgtt 17982948  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||| ||||| ||||||||||||| | ||||  ||||||||    
T  17982949 attggttactacgttcctttgctccacacatcatagtttgtattggtgt 17982997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 34256578 - 34256331
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  34256578 tcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 34256479  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  |||||| |||||||| ||| |||||||||||||  ||||||| ||| || ||||||||| |  |||| ||    
T  34256478 ctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttaat 34256380  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  34256379 attggttactactttcctttgctccacacatcatagtttgtattggtgt 34256331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 1746290 - 1746060
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||||||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  1746290 tcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatcgttggtgtgtttgtttctctcttct 1746191  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  ||||| ||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||| |    
T  1746190 ctccttttatattttgcttgtggttt-gcgcttttgactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgtt 1746092  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| | |||||||||||    
T  1746091 attggttactactttcctttactccacacatc 1746060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 84 - 225
Target Start/End: Complemental strand, 18106058 - 18105917
Alignment:
Q  84 ttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgt 183  Q
    |||||||||||||||| |||||||||||||||| |||||   |||||||||||||| ||| |||||||||||||  ||||||| ||||| ||||||||||    
T  18106058 ttgtttctcttctctctttatcttttgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgatgttattgttgttattgcttgtgt 18105959  T
Q  184 ttgctttgatattggttattactttcctctgctccacacatc 225  Q
    || |||| |||||||||| ||||||||| ||||| |||||||    
T  18105958 ttactttaatattggttactactttcctttgctctacacatc 18105917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 44303952 - 44304182
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| ||| |||||| ||| | || |  ||||||| |||||||||||  |||    
T  44303952 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaacaatctttggtgtgtttgtttctctcttct 44304051  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || ||||||||| |  |||| ||    
T  44304052 ctccttttatcttttgcttgtggttt-gtgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttgtgctcactttaat 44304150  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  44304151 attggttactactttcctttgctccacacatc 44304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 8965762 - 8965494
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||| || |||||||||||||| || || ||| ||||||||||||||||||||||||||| ||||| | ||||| ||||||||| |||||||    
T  8965762 tcattgatagtgcatcggagagataaatctctcccccatattaggtcaagttggaccgaactgggtaaacatttatcggtgtgtttgtttcttttctctc 8965663  T
Q  100 cttatcttttgcttgtggttttg--------aacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttg 191  Q
     |||||||||| |||||||||||           ||||||| |||||| ||| |||| |||||||| |||||||| ||||| ||||||||| || |||||    
T  8965662 tttatcttttgtttgtggttttgtttttttttttttttcac-ttgattcctagattaaatctaggt-ttgttattgttgttgttgcttgtggttactttg 8965565  T
Q  192 atattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||| ||| ||||| |||||||| |||| | ||||| |||||||| | |||||| | |||||||||||    
T  8965564 atattggttactacgttcct-tgctccacgcatcatagtttt-attggtgtga-ttttgagttcgaattcacaa 8965494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 30291707 - 30291856
Alignment:
Q  4 ttgatagtggattggagagataaatctttc--tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcct 101  Q
    ||||||||||||||||||||| ||||| ||  |||| | || | |||||||||||||||||  | | || |  ||||||| ||||||||||||||||| |    
T  30291707 ttgatagtggattggagagatcaatctctccctccagattatgccaagttggaccgaactgaatcaacaatctttggtgtgtttgtttctcttctctctt 30291806  T
Q  102 tatcttttgcttgtggttttgaacttttcactttgattactaaattagat 151  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30291807 tatcttttgcttgtggttttgaactttccactttgattactagattagat 30291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 19945430 - 19945200
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga-ccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || || | ||||||||||||| || ||||||||||| | || |  ||||||| |||||||||||  |||    
T  19945430 tcattgatagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 19945331  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  |||||||||| |||| ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  19945330 ctccttttatattttgcttgtggttt-gtgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 19945232  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  19945231 attggttactactttcctttgctccacacatc 19945200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 31218354 - 31218601
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||| ||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  31218354 tcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 31218453  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  ||||| ||||| || |||||  |||||||||||| || ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  31218454 ctccttttatcttgtgcttatg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 31218552  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||  ||||||||| ||||||||||||| | ||||  ||||||||    
T  31218553 attggttgctactttcctttgctccacacatcatagtttatattggtgt 31218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 265
Target Start/End: Complemental strand, 3051090 - 3050927
Alignment:
Q  104 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg----tgtttgctttgatattggt 199  Q
    |||| ||||||||||||||| ||||||||||| ||| ||| ||||||||||||| |||||||||||||| |||||||    || ||||||||||  ||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggt 3050991  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || |||||| || | ||||||||||| || |||  |||||||| || ||||| ||| |||||||||    
T  3050990 tactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaa 3050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 2627833 - 2628068
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt--ctctt- 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||| || ||||||||| |||||||  |||||     
T  2627833 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttc 2627932  T
Q  95 -ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg--tttttgcttgtgtttgctt 189  Q
     ||||||  ||||||| ||||||| |||||   |||||||| ||| || ||| ||||||||||||| |||||||| |||  ||||||||||      |||    
T  2627933 cctctccttttatcttgtgcttgt-gttttatgcttttcac-ttgtttcctagattagatctaggtgttgttattgttgattttttgcttgcacccactt 2628030  T
Q  190 tgatattggttattactttcctctgctccacacatctt 227  Q
    || || |||||| ||||||||| |||||||||||||||    
T  2628031 tgttagtggttactactttcctttgctccacacatctt 2628068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42435062 - 42434981
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||||||| || ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  42435062 tcattgatagtggattggagaaatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 42434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 8153966 - 8154107
Alignment:
Q  82 atttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgt 181  Q
    ||||||||||||||| |  ||||||||||| |||  |||||   |||||||||| ||| ||| |||| |||||||| |||||||||||||| ||||||||    
T  8153966 atttgtttctcttctttgtttatcttttgcatgtaattttgtgtttttcacttt-attcctagattacatctaggt-ttgttattattgttgttgcttgt 8154063  T
Q  182 gtttgctttgatattggttattactttcctctgctccacacatc 225  Q
    | || ||||||||||| ||| ||||||||| | || ||||||||    
T  8154064 ggttactttgatattgattactactttcctttacttcacacatc 8154107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4283621 - 4283702
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| |||||  | || | ||||||||||||||||||||||||||| | |||||||||||||    
T  4283621 tcattgatagtggattggagagatcaatctcccctctagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 4283702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18655497 - 18655578
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||| ||||||| ||||| || |||| ||||||||||||||||||||||||||| | ||||| |||||||    
T  18655497 tcattgatagtggattagagagatcaatctctcctccaaagtaggtcaagttggaccgaactgggtgaacattttttggtgt 18655578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 3772291 - 3772369
Alignment:
Q  3 attgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtg 80  Q
    |||||||||||||||||||||| ||||| |||| || |||||||||||||||||| |||||| |||  |||||||||||    
T  3772291 attgatagtggattggagagatcaatctatctctcagagtaggtcaagttggaccaaactggataaatatttcttggtg 3772369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 7597713 - 7597909
Alignment:
Q  2 cattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||||||||| ||||| | | |||||||||||||  ||| ||||||||||| |||  |||| ||| |||   |||||||||||||||    
T  7597713 cattgatagtggattggagagatcaatctctcccccatagtaggtcattgttagaccgaactggataaatatttattgatgtgcgtgtttctcttctctc 7597812  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
     |||||||||| || | ||||||   ||| ||| ||| || |||||||||||||| || |||||||| ||| | ||||||  | || ||||||||||||    
T  7597813 tttatcttttgtttatcgttttgtgttttacac-ttggttcctaaattagatctaagt-ttgttattgttggtgttgcttcaggttactttgatattgg 7597909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29796391 - 29796170
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccata-gtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    ||||| ||| |||||||||||||| ||||| || ||  | ||||||||  ||||||||||||| ||||| ||||| ||||||| || |||| ||||||||    
T  29796391 tcatttataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaacattt-ttggtgtgtt-gtttatcttctct 29796294  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
      ||||||||||||| || |||||  |||| |||||  ||||||| |||| ||||| | ||||||||||||||| ||||| | |  | |||||||| |||    
T  29796293 t-ttatcttttgcttatgattttgtgctttacactta-attactagattaaatctaag-attgttattattgttgttgctcgagaatactttgatactgg 29796197  T
Q  199 ttattactttcctctgctccacacatc 225  Q
    ||||||||| | | |||||||||||||    
T  29796196 ttattacttccttttgctccacacatc 29796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 11712071 - 11711807
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtca-agttggaccgaactgggtaatcatttcttggtgtatttg---tttctcttc 95  Q
    ||||||||||||||||| |||||| ||||| || | || |||||||||  ||||| || || ||||||| ||||||||| | | ||||   ||||| |||    
T  11712071 tcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattgttggtcctaattgggtaaacatttcttgatatgtttgtaatttcttttc 11711972  T
Q  96 tctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||| ||||| |||| ||||||||||   |||| |||| | ||| ||| ||||||||||||| ||| |||| ||||| || |||| | || |||| || |    
T  11711971 tctctttatcctttgtttgtggttttatgctttacactct-attcctatattagatctaggt-ttg-tattgttgttgtttcttgaggttacttttatct 11711875  T
Q  196 tggttattactttcc-tctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| |||||||| | ||||||||||||||  ||||  |||||||||| |||||| |||||||||||||    
T  11711874 tggttactactttccttttgctccacacatctaagttt--attggtgtaa-ttttgagtccgaattcacaa 11711807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 10930269 - 10930188
Alignment:
Q  2 cattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt-aatcatttcttggtgt 81  Q
    ||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| ||  ||||||||||||    
T  10930269 cattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatttcttggtgt 10930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 26287765 - 26287709
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaata 271  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||| |||||    
T  26287765 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaacaaata 26287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 26313016 - 26312960
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaata 271  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||| |||||    
T  26313016 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaacaaata 26312960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 32902151 - 32902027
Alignment:
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    ||||||||||||| ||||||||   ||||||| ||| || ||| ||||||||||||| ||||| || ||||| ||| ||| | ||||||||||||| |||    
T  32902151 ttatcttttgcttttggttttgtgtttttcac-ttggttcctagattagatctaggt-ttgttgttgttgttgttgtttgaggttgctttgatattagtt 32902054  T
Q  201 attactt-tcctctgctccacacatct 226  Q
    | ||||| || | ||||||||||||||    
T  32902053 actacttctcttttgctccacacatct 32902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 40221845 - 40221907
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt 65  Q
    ||||||||||||||||||||| ||||| || || | | |||||||||||||||||||||||||    
T  40221845 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggt 40221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8153855 - 8153936
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||| |||||||||||| ||||| |||  || ||||||||||||||||||||| ||| |||  |||| |||||||    
T  8153855 tcattgatagttgattggagagatcaatctcttcctcagagtaggtcaagttggaccgaaatggataaatattttttggtgt 8153936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 11384083 - 11384163
Alignment:
Q  2 cattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||| ||||||||||| ||  |||| || |||| ||||||| ||||||||||||||||||| | ||||| |||||||    
T  11384083 cattgatactggattggagacatcgatctctcctccagagtaggttaagttggaccgaactgggtgaacattttttggtgt 11384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18106150 - 18106087
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggt 65  Q
    ||||||||||||  |||||||||| ||||| || ||| | |||||||||||||||||||||||||    
T  18106150 tcattgatagtgt-ttggagagatcaatctctccccagaataggtcaagttggaccgaactgggt 18106087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 31071463 - 31071514
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  31071463 tgctccacacatctttgtttacattggtgtgagtttt-tatccgaattcacaa 31071514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4162594 - 4162668
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttct 75  Q
    |||||||||| |||||||||| || ||||| || |||  ||||||||||||||||||||| ||||||| |||||||    
T  4162594 tcattgatag-ggattggagatatcaatctctccccaagagtaggtcaagttggaccgaattgggtaaacatttct 4162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 18870797 - 18870832
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttt 248  Q
    |||||||||||||||||||||||||||||| |||||    
T  18870797 tgctccacacatctttgttttcattggtgtgagttt 18870832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 30655500 - 30655465
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttt 248  Q
    |||||||||||||||||||||||||||||| |||||    
T  30655500 tgctccacacatctttgttttcattggtgtgagttt 30655465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 1262188 - 1262222
Alignment:
Q  215 ctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||| ||||||    
T  1262188 ctccacacatctttgttttcattggtgtgagtttt 1262222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 28307419 - 28307370
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||||||||||||| | |||   ||||||||||||||    
T  28307419 tgctccacacatctttgttttcattggtgtgatttt---atccgaattcacaa 28307370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 26301010 - 26300960
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||| ||||||||||| ||||||||| ||||||  ||||||||||||||    
T  26301010 tgctccacgcatctttgtttacattggtgtgagtttt--atccgaattcacaa 26300960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 33038044 - 33038073
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  33038044 tgctccacacatctttgttttcattggtgt 33038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 4162692 - 4162759
Alignment:
Q  126 ttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    |||||||||||||| ||| ||||||||||||   | ||||||||||| ||| ||||| || ||||||||||    
T  4162692 ttttcactttgattcctagattagatctagg---ttttattattgttgttgtttgtgattactttgatatt 4162759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40328877 - 40328954
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||    |||||| |||||| || | |||||||||||||    
T  40328877 tcattgatagtggattggagagatcaatctctcctccagagtaggt----ttggacggaactgagtgaacatttcttggtgt 40328954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 29196457 - 29196185
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||||||||    
T  29196457 tcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctc 29196358  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  29196357 tttatcttttgcttgtggttttgagcttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattgg 29196258  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaata 271  Q
    ||| ||||||||| ||||||||||||| | ||||  |||||||| || ||||| ||||||||||||| |||||    
T  29196257 ttactactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcacaacaaata 29196185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 32891204 - 32891456
Alignment:
Q  4 ttgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||||||||| || ||   ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32891204 ttgatagtggattggagagataaatctctcccccggagtaggtcatgttggaccgaactggataatcatttcttggtgtgtttgtttctcttctctcctt 32891303  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||||||||||||         | ||||| |||||||||||| |||| ||||||||||     
T  32891304 atcttttgcttgtggttttgagtttttcactttgattcctatattagatctagg---------tgttgttgttgcttgtgtttactttaatattggttac 32891394  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| ||||||||||||| | | |||||||||||| |||||||| |||||| ||||||    
T  32891395 tactttcctttgctccacacatcatag-tttcattggtgtgagttttgagtccgaagtcacaa 32891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 23391977 - 23391714
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    |||||||||||||| |||||||||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||    
T  23391977 ttgatagtggattgtagagataaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctcttt 23391878  T
Q  103 atcttttgcttgtggttttg-aacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtta 201  Q
    ||||||||||||||||||||    |||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||  |||||||||||||||    
T  23391877 atcttttgcttgtggttttgtgttttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgttcactttgatattggtta 23391778  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||| | ||||||||||| | ||||  |||||||| |||||||  | |||||||||||    
T  23391777 ttactttccttttctccacacatcatagtttgtattggtgtgagttttgtgttcgaattcacaa 23391714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 4 - 262
Target Start/End: Complemental strand, 44700546 - 44700289
Alignment:
Q  4 ttgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctta 103  Q
    ||||||||||||||||||||| ||||| || ||| | ||||||||||||||||||||| ||| | || |  || |||| ||||||||||||||||| |||    
T  44700546 ttgatagtggattggagagatcaatctctccccacattaggtcaagttggaccgaactaggtcaacaatctttcgtgtgtttgtttctcttctctcttta 44700447  T
Q  104 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 203  Q
    || |||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| |    
T  44700446 tcctttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattggttact 44700347  T
Q  204 actttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattca 262  Q
    ||||| || |||||||  |||| | ||||  |||||||| | |||||| ||||||||||    
T  44700346 acttttctttgctccatgcatcatagtttgtattggtgtga-ttttgagtccgaattca 44700289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 9666534 - 9666272
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    |||||||||||||||||||||  |||| || || | | ||||| ||||||||||||||||||| | || |  ||||||| |||||||||||| |||| ||    
T  9666534 ttgatagtggattggagagattgatctctcccccagattaggtaaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttatctcttt 9666435  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattggtta 201  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||| | |||||||||||||||||||    
T  9666434 atcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtagttgcttgttatttgctttgatattggtta 9666335  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||||| ||||||||| ||| | ||||  |||||||| | |||||| |||||||||||||    
T  9666334 ctactttcctttgctccacagatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 9666272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 31314545 - 31314784
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||| | || || ||| |||||||||||||||||||||| || | || |  ||||||| ||||||||||||||||| ||    
T  31314545 ttgatagtggattggagagatcaatatctcccccatattaggtcaagttggaccgaactgagtcaacaatctttggtgtgtttgtttctcttctctcttt 31314644  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| || ||||| |||||||||||||| |||||||||||| |||| ||||| |||||    
T  31314645 atcttttgcttgtggttttgagcttttcactttgattactagattatatttaggtgttgttattattgttgttgcttgtgtttactttaatattagttat 31314744  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||||||| ||||||| ||||| | ||||  ||||||||    
T  31314745 tactttcctttgctccatacatcatagtttgtattggtgt 31314784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 22835073 - 22834809
Alignment:
Q  1 tcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttg-tttctcttctct 98  Q
    |||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||||||||||||  ||  || | ||||||| |||  ||||||||||      
T  22835073 tcattgatagtggattggagagatcaatctctccgccatattaggtcaagttggaccgaactggtcaacaatat-ttggtgtgttttctttctcttcttc 22834975  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||||| || | ||||||| ||||||||||||    
T  22834974 ctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattacctgtgtttactttgatattgg 22834875  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  22834874 ttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 22834809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 39153432 - 39153170
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt-atttgtttctcttctct 98  Q
    |||||||||||||||||||||||  ||||| | | ||| | ||||||||||||||| ||||||||| | || |  ||| |||  |||||||||||||||     
T  39153432 tcattgatagtggattggagagaacaatctctcccccagattaggtcaagttggactgaactgggtcaacaatctttgttgtgttttgtttctcttctcc 39153333  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |   |||||||||| |||||| |||||    
T  39153332 ctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctgccgcttgtgtttactttgaaattgg 39153233  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattc 261  Q
    ||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||||  ||||||||    
T  39153232 ttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagcccgaattc 39153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 760944 - 761209
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctc--ttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||| ||| ||||| | || |  ||||||| ||||||||||  |||||    
T  760944 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggactgaaatgggttaacaatctttggtgtgtttgtttctctcttctc 761043  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  || |||| ||||| ||||||| |||  ||||||| |||    
T  761044 tctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttg 761143  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| ||||||||||||| | ||||  ||||||||  | ||||| |||||||||||||    
T  761144 gttactactttcctttgctccacacatcatagtttgtattggtgt--gatttgagtccgaattcacaa 761209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 7762362 - 7762611
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||||||||||| | || |   || ||| ||||||  ||||||||    
T  7762362 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctatgatgtgtttgtttctctcttct 7762461  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||| || || ||||||||  |||||||    
T  7762462 ctccttttatcttttgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattacttgtgttcactttgat 7762561  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgta 243  Q
    |||||||| ||||||||| ||||||||||||| | ||||  |||||||||    
T  7762562 attggttactactttcctttgctccacacatcatagtttgtattggtgta 7762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 265
Target Start/End: Complemental strand, 27305777 - 27305521
Alignment:
Q  5 tgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctta 103  Q
    |||||||||||||||||||| ||||| || |||| |||||||||| ||||||||||||| |||  |||||||| |||| ||||||||||||||||  |||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtcaatttggaccgaactgtgtatacatttctttgtgtgtttgtttctcttctctattta 27305678  T
Q  104 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 203  Q
    ||||||| |||||||||||   |||||||||| | | ||| ||||||||||||| | |||||| ||||| ||||||||  || ||||||||||||||| |    
T  27305677 tcttttgtttgtggttttgtgtttttcacttt-actcctagattagatctaggt-tggttattgttgttgttgcttgttgttactttgatattggttact 27305580  T
Q  204 actttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  27305579 actttcctttgctccacacatcatagttt--attggtgtga-ttttgagtccgaattcacaa 27305521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 21351004 - 21350813
Alignment:
Q  70 atttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattatt 169  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||| ||| ||||||||||||||| ||| ||||||||||   | |||| |||||    
T  21351004 atttcttggtgtgtttgtttctcttctcactttatcttatgcttgtggttatgagcttttcactttgattcctagattagatcta---agtgttgttatt 21350908  T
Q  170 gtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||| |||||||| ||||||||||||||| ||||||||| |||| |||||||||||  |||||||||||| |||||||| |||||||||||||    
T  21350907 gttgttgtttgtgtttactttgatattggttactactttcctttgcttcacacatcttt-atttcattggtgtgagttttgagtccgaattcacaa 21350813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16499126 - 16499340
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | ||||||| ||||||||||||||||||| | || |  |||||||||||||||||||||||||    
T  16499126 tcattgatagtggattggagagatcaatctctcccccagagtaggttaagttggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctc 16499225  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| ||||| ||||||         |||||||||||| ||||||| |||||    
T  16499226 tttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgtta---------ttgcttgtgtttactttgatgttggt 16499315  T
Q  200 tattactttcctctgctccacacat 224  Q
    || ||||||||| ||||||||||||    
T  16499316 tactactttcctttgctccacacat 16499340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19683960 - 19683706
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  19683960 tcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 19683861  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  ||||||||||||||||||||   |||||||||| ||| ||| |||||||||||||  ||||||| ||| || |||||||||||  |||||||    
T  19683860 ctccttttatcttttgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgat 19683761  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 248  Q
    |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| |||||    
T  19683760 attggttactactttcctttgctccaaacatcatagtttgtattggtgtgagttt 19683706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 40735480 - 40735709
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||||||||||  |||||||||    
T  40735480 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcagcaatctttggtgtatttgttcctctcttctc 40735579  T
Q  98 tcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatat 195  Q
    ||||| ||||||||||||||| ||||  |||||||||||| || ||| |||||||||||||  ||||||| ||| || ||| |||||||  |||||||||    
T  40735580 tcctttatcttttgcttgtggatttgtgcttttcactttggttcctatattagatctaggtgctgttattgttgattattgtttgtgttcactttgatat 40735679  T
Q  196 tggttattactttcctctgctccacacatc 225  Q
    |||||| ||||||||| |||||||||||||    
T  40735680 tggttactactttcctttgctccacacatc 40735709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 29810965 - 29811235
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | |||||||||||  |||||| ||||| | || |  ||||||| ||||||  |||||||||    
T  29810965 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttaaaccgaattgggtcaacaatctttggtgtgtttgttcatctcttctc 29811064  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  |||||| |    
T  29811065 tccctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttctctttgaaa 29811164  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||| ||| |  |||  |||||||| |||||||| | |||||||||||    
T  29811165 ttggttactactttcctttgctccacaaatcatattttgtattggtgtgagttttgagttcgaattcacaa 29811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 2075144 - 2074885
Alignment:
Q  3 attgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcct 101  Q
    |||||||||||||| ||||||| ||||| || || | |||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||| |    
T  2075144 attgatagtggatttgagagatcaatctctccccgagagtaggtcaagttggatcgaactgggtaaacatttctgggtgtgtttatttctcttctctctt 2075045  T
Q  102 tatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtta 201  Q
    |||||||||||||||||||||   ||||||| ||| || ||| |||| |||| ||| || ||||| || || ||||||||| ||  ||||||||||||||    
T  2075044 tatcttttgcttgtggttttgtgtttttcac-ttgtttcctagattaaatctgggt-ttattattgttattgttgcttgtggttattttgatattggtta 2074947  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||||| ||||||||||||| | ||||| |||||||| | |||||  |||||||||||||    
T  2074946 ctactttcctttgctccacacatcatagtttt-attggtgtga-ttttgggtccgaattcacaa 2074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 265
Target Start/End: Complemental strand, 23410395 - 23410133
Alignment:
Q  6 gatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttat 104  Q
    |||| |||||||||||||||||||| || || | | |||||||||||||| |||| ||||| | || |  ||||||| ||||||| | ||||||| ||||    
T  23410395 gataatggattggagagataaatctctcccccaaattaggtcaagttggaacgaattgggtcaacaatctttggtgtgtttgtttatattctctctttat 23410296  T
Q  105 cttttgcttgtggttttgaacttttc--actttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    |||||||||||||||||||  ||||   ||||||||||||| ||||||||||||| |||||| |||| || |||||||||||  |||||||||  ||||     
T  23410295 cttttgcttgtggttttgagttttttttactttgattactagattagatctaggtgttgttaatatttttgttgcttgtgttcactttgatatatgttac 23410196  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| || |||||||||| | ||||  |||| ||| |||||||  |||||||||||||    
T  23410195 tactttcctttgatccacacatcatagtttgtattgatgtgagttttgtgtccgaattcacaa 23410133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 40734595 - 40734863
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  |||| || ||||||  |||||||||    
T  40734595 tcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggagtgtttgttcctctcttctc 40734694  T
Q  98 tcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgtta-ttattgtttttgcttgtgtttgctttgatat 195  Q
    ||||| ||||||||||||||| ||||  |||| |||||||||| ||| |||||||||||||  ||||| || || || || ||||||||  |||||||||    
T  40734695 tcctttatcttttgcttgtggatttgtgctttgcactttgattcctagattagatctaggtgctgttattttttattatttcttgtgttcactttgatat 40734794  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| ||||||||||||| | ||||  |||||||| | ||||||  ||||||||||||    
T  40734795 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagaccgaattcacaa 40734863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 29813160 - 29813428
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||| |||||||||||||||||| ||||| || || | | | ||||| ||||||||||||||||| | || |  ||| ||| ||||||  |||||||||    
T  29813160 tcatttatagtggattggagagatcaatctctcccccagatttggtcatgttggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctc 29813259  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatatt 196  Q
     | |||||||||| |||||||||||| |||||||||||||||  || |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||||    
T  29813260 cctttatcttttggttgtggttttgagcttttcactttgattcttagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatt 29813359  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     |||| |||||| || ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  29813360 agttactacttttctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 29813428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 7764561 - 7764832
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg-gaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||| ||  ||||||||||||| | || |  ||||||| |||||||||||  |||    
T  7764561 tcattgatagtggattggagagatgaatctctcctccagagtaggtcaaatttagaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 7764660  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||| |||||||||||  ||||||||||||||| | | |||||||||||||  ||||||| ||| || |||||||||||  |||||||    
T  7764661 ctccttttatcttttgtttgtggttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttgattattgcttgtgttcactttgat 7764760  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc-gaattcacaa 265  Q
    |||||||| ||||||||| | || |||||||| | ||||  |||||||| |||||||| ||| ||||||||||    
T  7764761 attggttactactttcctttacttcacacatcatagtttgtattggtgt-agttttgagtccggaattcacaa 7764832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 5236527 - 5236254
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctct 98  Q
    ||||||||| |||||| ||||||| |||||||| ||| | |||||||| ||||||| |||||||| | || |  ||||||| ||||||  ||||||||||    
T  5236527 tcattgataatggattcgagagatcaatctttccccagattaggtcaatttggaccaaactgggtcaacaatctttggtgtgtttgttcctctcttctct 5236428  T
Q  99 cctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatat 195  Q
    ||||  ||||||||||||||| ||||  ||||||||||||||| ||| ||||||||||||   | ||||| ||| || |||||||||||  |||||||||    
T  5236427 ccttttatcttttgcttgtggatttgtgcttttcactttgattcctagattagatctaggagctcttattgttgattattgcttgtgttcactttgatat 5236328  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 270  Q
     | ||| ||||||||| | ||||||||||| | ||||  |||||||| | |||||| ||||||||||||| ||||    
T  5236327 cgattactactttcctgtactccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaaat 5236254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 51398911 - 51399180
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||||||||||||||||||  |||| || || | | ||||||||||||||||||||| ||| | || |  ||||||| ||||||  |||||||||    
T  51398911 tcattgatagtggattggagagatttatctctcccccagattaggtcaagttggaccgaacttggtcaacaatctttggtgtgtttgttcctctcttctc 51399010  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  |||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||||| ||| |  ||||||||    
T  51399011 tccctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgctgttattgttgattattgctagtgctcactttgata 51399110  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||  ||||||||| ||||||| ||||| | ||||  |||||| | | |||||| |||||||||||||    
T  51399111 ttgttttctactttcctttgctccatacatcatagtttgtattggtatga-ttttgagtccgaattcacaa 51399180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 9581379 - 9581627
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||| ||| |||||||||||  |||    
T  9581379 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttct 9581478  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  |||| || ||||||||||||||  |||||||||||||||  || |||||||||||||  ||||||| ||| || ||||||||| |  |||||||    
T  9581479 ctccctttattttgtgcttgtggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgtgctcactttgat 9581578  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||||||||| |||| |||||||| | ||||  ||||||||    
T  9581579 attggttactactttcctttgcttcacacatcatagtttatattggtgt 9581627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5260394 - 5260164
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||||||| ||| | || |  ||||||| |||||||||||  |||    
T  5260394 tcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaacaatctttggtgtgtttgtttctctcttct 5260295  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  ||||||||||||||| ||||||||||||||||| |||||||| ||| || |||||||   |  ||||| |    
T  5260294 ctccttttatattttgcttgtggttt-gtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgcactcactttgtt 5260196  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  5260195 attggttactactttcctttgctccacacatc 5260164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 29682456 - 29682700
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||| ||||||||||||||||||||| | || |  ||||||| | |||||||||  ||||    
T  29682456 tcattgatagtggattggagagatcaatctctcccctagattagatcaagttggaccgaactgggtcaacaatctttggtgtgtatgtttctctcttctc 29682555  T
Q  100 c--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    |  |||||||||||||||||||||||  |||||||||||||| |||  ||||||||||||  || |||| ||||| |||||||| ||  |||| || |||    
T  29682556 cctttatcttttgcttgtggttttgagtttttcactttgattcctaggttagatctaggtgctgctattgttgttattgcttgtattcactttaattttg 29682655  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
     ||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  29682656 attactactttcctttgctccacacatcatagtttgtattggtgt 29682700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 53921574 - 53921422
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || ||   ||||| ||||||| ||||||||||| ||| |||||||| |||| |||||||||||||||||    
T  53921574 tcattgatagtggattggagagatcaatctctcccccggagtagatcaagtttgaccgaactggataaacatttcttagtgtgtttgtttctcttctctc 53921475  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 152  Q
     |||| ||||| |||||||||||| ||||||||||||||| ||| ||||||||    
T  53921474 tttatattttgtttgtggttttgagcttttcactttgattcctagattagatc 53921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5258215 - 5257985
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||||||| ||| | || |  ||||||| |||||||||||  |||    
T  5258215 tcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaacaatctttggtgtgtttgtttctctcttct 5258116  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  5258115 ctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 5258017  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  5258016 attggttactactttcctttgctccacacatc 5257985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37408555 - 37408786
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    ||||||||||||||||| |||||| ||||| || |||| ||||||||||||| ||| |||||||||| | || |  ||||||| |||||||||||  |||    
T  37408555 tcattgatagtggattgaagagatcaatctctcctccagagtaggtcaagtttggatcgaactgggtgaacaatctttggtgtgtttgtttctctcttct 37408654  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||| ||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| ||||| |  |||| ||    
T  37408655 ctccttttatcttttgcttgtgatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgctcactttaat 37408754  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  37408755 attggttactactttcctttgctccacacatc 37408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 51352143 - 51351938
Alignment:
Q  61 tgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtatt 160  Q
    ||||||| ||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||   |||||| ||||||| ||| ||||||||||||| ||    
T  51352143 tgggtaaacatttcttgatgtgtttgtttctcttctctctttatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggt-tt 51352046  T
Q  161 gttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaatt 260  Q
    |||||| ||| |  |||||||| || |||||||||||||||  |||||||| ||||||||||||| | || || |||| ||| | |||||| ||||||||    
T  51352045 gttattgttgctgctgcttgtgattactttgatattggttaccactttcctttgctccacacatcgtagtatt-attgatgtga-ttttgagtccgaatt 51351948  T
Q  261 cacaataaat 270  Q
    ||||| ||||    
T  51351947 cacaacaaat 51351938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9636197 - 9635948
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga-ccgaactgggtaatcatt-tcttggtgtatttgtttctctt--c 95  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| || ||||||||||| | || | ||||||||| |||||||||||   |    
T  9636197 tcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgtgtttgtttctctctgc 9636098  T
Q  96 tctcc---ttatcttttgcttgtggttt-tgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgcttt 190  Q
    |||||   ||||||| |||||||| ||| ||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||    
T  9636097 tctcccttttatcttgtgcttgtgatttatg--cttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcacttt 9636000  T
Q  191 gatattggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  9635999 gatattggttactactttcctttgctccacacatcatagtttgtattggtgt 9635948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 32744504 - 32744335
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    |||||||||||||| |||||||||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||| | |||| ||    
T  32744504 ttgatagtggattgaagagataaatctatcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcatatctcttt 32744405  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgctt 179  Q
    ||||||||||||||||       |||||||||||||| ||| ||||||||||||| ||||||| |||||| ||||||    
T  32744404 atcttttgcttgtggt-------ttttcactttgatttctagattagatctaggtgttgttatcattgttgttgctt 32744335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45095260 - 45095490
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||| |||||||||||||| | || |  |||| ||||||||||||||  |||    
T  45095260 tcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggcgtatttgtttctctattct 45095359  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |   ||| | ||||||||  || |||||||||| ||  ||||||| ||| || ||||||||| |  |||||||    
T  45095360 ctccttttatcttttgcttgtggttt-gtgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttgtgctcactttgat 45095458  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| ||||| |||||||    
T  45095459 attggttactactttcctttgctctacacatc 45095490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6095670 - 6095589
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||| || | |||||||||||||    
T  6095670 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgtgtgaacatttcttggtgt 6095589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 9634763 - 9634666
Alignment:
Q  125 cttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccaca 221  Q
    ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  9634763 cttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaca 9634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 33191928 - 33192050
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||| ||||||| ||||| |||||| || ||||||  |||||||  |||| ||||| ||||| ||||||| ||||||||| |||||      
T  33191928 tcattgatagtggattagagagatcaatctctctccagaggaggtcattgttggacaaaacttggtaaacattttttggtgtgtttgtttcttttctcga 33192027  T
Q  100 cttatcttttgcttgtggttttg 122  Q
     |||||||||| |||||||||||    
T  33192028 tttatcttttgtttgtggttttg 33192050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34491309 - 34491374
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||    
T  34491309 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggt 34491374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54593801 - 54593882
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| |||| ||||||||||||| |||||||| | |||||||||||||    
T  54593801 tcattgatagtggattggagagatcaatctctcctccagagtatgtcaagttggaccaaactgggtgaacatttcttggtgt 54593882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4570049 - 4570131
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||| ||| |||||||||||||||| | |||||||||||||    
T  4570049 tcattgatagtggattggagagatcaatctctactccagagtaggtgaagtttggaccgaactgggtcaacatttcttggtgt 4570131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 55302043 - 55301961
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||||| ||| | |||||||| ||||    
T  55302043 tcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacatttcttagtgt 55301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 44331644 - 44331707
Alignment:
Q  3 attgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||| ||||| || || | | |||||||||||||||||||||||||    
T  44331644 attgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggt 44331707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30236222 - 30236304
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggt-aatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | | ||| | ||||||||||||||||||||| ||| ||  ||||||||||||    
T  30236222 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactaggtcaacaatttcttggtgt 30236304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43403815 - 43403749
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||||  |||||||||||||||||    
T  43403815 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggt 43403749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46860571 - 46860653
Alignment:
Q  1 tcattgatagtggattggagagataaatcttt-ctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||  ||||||||||| ||| | | ||||| |||||||    
T  46860571 tcattgatagtggattggagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaacattttttggtgt 46860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 1305813 - 1305763
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  1305813 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 1305763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 1309718 - 1309668
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  1309718 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 1309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 32143185 - 32143135
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  32143185 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 32143135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40913390 - 40913455
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt 65  Q
    |||| ||||||||||||||||||| ||||| || || | | |||||||||||||||||||||||||    
T  40913390 tcatcgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggt 40913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46173454 - 46173515
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaact 61  Q
    |||||||||||||||||||||||| ||||| | | ||| | |||||||||||||||||||||    
T  46173454 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaact 46173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47304348 - 47304413
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||| |||||||||||||    
T  47304348 tcattgatagtggattggagagatcaatctctccccaagattaggtcaagtttgaccgaactgggt 47304413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 2671824 - 2671860
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2671824 tgctccacacatctttgttttcattggtgtgagtttt 2671860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 8477224 - 8477188
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8477224 tgctccacacatctttgttttcattggtgtgagtttt 8477188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 23200209 - 23199982
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctctt-- 94  Q
    |||||||||||| ||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||   ||||      
T  23200209 tcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcttcttcc 23200110  T
Q  95 ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttg 191  Q
    ||||||  ||||||| ||||||||| ||||   |||||| |||| || ||| ||||||||||||| || ||||| ||| || |||||||   |  |||||    
T  23200109 ctctccttttatcttatgcttgtgg-tttgtgtttttcattttgtttcctagattagatctaggtgtt-ttattgttgattattgcttgcactcactttg 23200012  T
Q  192 atattggttattactttcctctgctccaca 221  Q
     ||||||||| ||||||||| |||||||||    
T  23200011 ttattggttactactttcctttgctccaca 23199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 801189 - 801280
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    ||||||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  801189 tcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttt 801280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23198010 - 23197908
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctcttct 96  Q
    |||||||||||| ||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||  |||||||    
T  23198010 tcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttct 23197911  T
Q  97 ctc 99  Q
    |||    
T  23197910 ctc 23197908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43401872 - 43401806
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    ||||||||||||||||||||| || ||||| | ||||| |||||||||  |||||||||||||||||    
T  43401872 tcattgatagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggt 43401806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49199540 - 49199474
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| | ||||| | |||||||  |||||||||||||||||    
T  49199540 tcattgatagtggattggagagattaatctctcctccagactaggtcatggttggaccgaactgggt 49199474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 8739302 - 8739331
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  8739302 tgctccacacatctttgttttcattggtgt 8739331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 9091540 - 9091569
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  9091540 tgctccacacatctttgttttcattggtgt 9091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 40373033 - 40373069
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  40373033 tgctccacacacctttgttttcattggtgtgagtttt 40373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 46147459 - 46147197
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    |||||||||||||||||| || ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||    
T  46147459 ttgatagtggattggagacatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctcttt 46147360  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||     
T  46147359 atcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtattgttattattgttgttgcttgtgttcactttgatattggttac 46147260  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| ||||||||||||| | |||| ||||||||| ||||||||  | ||||||||||    
T  46147259 tactttcctttgctccacacatcatagtttgcattggtgtgagttttgaggcggaattcacaa 46147197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 26175707 - 26175438
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  26175707 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 26175608  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||| |||||| ||    
T  26175607 tccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctattgcttgtgtttactttgaaat 26175508  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  26175507 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 26175438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 4 - 267
Target Start/End: Complemental strand, 52467422 - 52467157
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||    
T  52467422 ttgatagtggattggagagatcaatctctccccgagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctcttt 52467323  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggtta 201  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |  |||||||| ||| |||||||||||||||    
T  52467322 atcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgatgattgcttgtctttactttgatattggtta 52467223  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaata 267  Q
      |||||||| |||| |||||||| | ||||  |||||||| |||||||| |||||||||||||||    
T  52467222 ccactttcctttgcttcacacatcatagtttgtattggtgtgagttttgagtccgaattcacaata 52467157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 47038482 - 47038219
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | |||| |||||||||||||||||||||| | || |  ||||||| |||||||||||||||||    
T  47038482 tcattgatagtggattggagagatcaatctctcccccagagtaagtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctc 47038383  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||||| ||| |||||||| |||||||||||||    
T  47038382 tttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattggt 47038283  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcaca 264  Q
    || ||||||||| || |||||||||| | ||||  |||||||| | |||||| ||| ||||||||    
T  47038282 tactactttcctttgttccacacatcatagtttgtattggtgtga-ttttgagtccaaattcaca 47038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 36463457 - 36463198
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    |||| |||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  |||||||  |||||||||||||||| ||    
T  36463457 ttgacagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgt--ttgtttctcttctctcttt 36463360  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    |||||||||||||||||||||  ||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  36463359 atcttttgcttgtggttttgagtttttcgctttgattaccaaattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattggttat 36463260  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| | ||||||||||| | ||||  ||| |||| | |||||| |||||||||||||    
T  36463259 tactttcctttactccacacatcatagtttgtattagtgtga-ttttgagtccgaattcacaa 36463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 45687253 - 45686989
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||||||||||  |||| || |||||| || |||||||||||||||||||||| | || |  ||||||| ||||||||| |||||||    
T  45687253 tcattgatagtggattggagagatctatctctcctccatattatgtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttcttttctctc 45687154  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     |||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  45687153 tttatctgttgcttgtggttttgagcttttcactttgattactagatt-gatctaggtgttgttattattgttgttgcttgttgtttgctttgatattgg 45687055  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||| || ||||||||||    
T  45687054 ttactactttcctttgctccatacatcatagtttgtattggtgtga-ttttgagtctgaattcacaa 45686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 48893706 - 48893445
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||    
T  48893706 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctcttt 48893607  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    |||||||||||||| |||||  |||||||||||||||  |  |||||||||||||  ||||||| ||||| |||||||||||| |||||||||||||||     
T  48893606 atcttttgcttgtgattttgtgcttttcactttgattcttggattagatctaggtgctgttattgttgttattgcttgtgtttactttgatattggttac 48893507  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  48893506 tactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 48893445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 12743996 - 12743730
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||| ||    
T  12743996 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttttc 12743897  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||||  ||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||   |||||||||||| |||||| ||    
T  12743896 tccttttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattg---ttgcttgtgtttactttgaaat 12743800  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| ||||||||||| | | ||||  |||||||| |||||||| |||||||||||||    
T  12743799 tggttactactttcctttgctccacacaacatagtttgtattggtgtgagttttgagtccgaattcacaa 12743730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 6542247 - 6542028
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || |  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||    
T  6542247 ttgatagtggattggagagatcaatctctcccccagggtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgtttctcttatctcttt 6542148  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    ||||||| |||||| |||||   |||||||||| ||| ||| ||||||||||||| |||   |||||||| ||||||||| || ||||||||||||||||    
T  6542147 atctttttcttgtgattttgtgtttttcactttaattcctagattagatctaggttttg---ttattgttgttgcttgtgattactttgatattggttat 6542051  T
Q  203 tactttcctctgctccacacatc 225  Q
    ||||||||| |||||||||||||    
T  6542050 tactttcctttgctccacacatc 6542028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 31474248 - 31474510
Alignment:
Q  1 tcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||| |||||||||||||||||| ||  ||| ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |    
T  31474248 tcattgatagttgattggagagataaatctctccaccagagtagatcaagttggaccgaactgggtaaacatatcttggtgtgtttgtttctcttctccc 31474347  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||| |||| || |||||  ||||||||||| ||| ||| ||||||||||||| |||||||| ||||| ||| |||||||| ||||||||||| |    
T  31474348 tttatctttagcttttgattttgtgcttttcactttaattcctagattagatctaggtgttgttattgttgttgttgtttgtgtttactttgatattgat 31474447  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||| | |||| |||||||| ||||||  |||||||| |   |||| |||||||||||||    
T  31474448 tactactttcatttgctacacacatcattgtttgtattggtgtga---ttgagtccgaattcacaa 31474510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 12739621 - 12739355
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  12739621 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 12739522  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||||  ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||| |||||||||   || |||||||||||| |||||| ||    
T  12739521 tccttttatcttttgcttgtggttttgtgcttttcactttgattacttgattagatctaggtgttgttatta---ttattgcttgtgtttactttgaaat 12739425  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||| | | ||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  12739424 tggttactactttcttttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 12739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 36994621 - 36994817
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || ||| ||| ||||||||||||||||||||| | || || |||| || |||||||||||||||||    
T  36994621 tcattgatagtggattggagagatcaatctctcccccatattagatcaagttggaccgaactgggtcaacaatt-ttggcgtgtttgtttctcttctctc 36994719  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
     |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| ||||    
T  36994720 tttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattg 36994817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 37229792 - 37229528
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| |||||||||||||||||| ||||| || | |||||||||||||||||||||||||| ||||| |||||||||| || |||||||||||||||||    
T  37229792 tcatttatagtggattggagagatcaatctctccctcatagtaggtcaagttggaccgaactaggtaaacatttcttggcgtgtttgtttctcttctctc 37229693  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||| ||| ||||||||  ||||||||||| ||| ||||||||||||||||| | |||||| ||||| ||||||||  || |||||||||||||    
T  37229692 tttatcttttacttatggttttgtgcttttcacttt-attcctaaattagatctaggt-tggttattgttgttattgcttgttgttactttgatattggt 37229595  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataa 268  Q
    || ||||| ||  ||||||||||| | | ||||| |||||| | | |||||| ||||||||||||||||    
T  37229594 tactacttcccattgctccacacaacatagtttt-attggtttta-ttttgagtccgaattcacaataa 37229528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 56178708 - 56178438
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  56178708 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 56178609  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt-attgtttttgcttgtgtttgctttgat 193  Q
    ||||||  ||||||||||||||||||||  ||||||||||| ||| ||| ||||||||||||| ||||||||  || || |||||||||||  |||||||    
T  56178608 ctccttttatcttttgcttgtggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgtttattattgcttgtgttcactttgat 56178509  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  56178508 attggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 56178438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 5871920 - 5872144
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctc--ttctctcc 100  Q
    ||||||||||||| ||||||| ||||| || || | | ||||||||||| ||||||||||||| | || |  ||||||| |||| |||||  |||||||     
T  5871920 ttgatagtggattagagagatcaatctctcccccagattaggtcaagtttgaccgaactgggtcaacaatctttggtgtgtttgattctctcttctctct 5872019  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
     |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||  ||||||||||||||    
T  5872020 ctatcttttgcttttggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatattggtt 5872119  T
Q  201 attactttcctctgctccacacatc 225  Q
    | ||||||||| |||||||||||||    
T  5872120 actactttcctttgctccacacatc 5872144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 9927529 - 9927260
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | |||||||||||||||||||||| || | || |  ||||||| |||||| ||||  ||||    
T  9927529 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgagtcaacaatctttggtgtgtttgttcctctattctc 9927430  T
Q  98 tcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgatat 195  Q
    ||||| ||||||||||||||| ||||  ||||||||||||||| ||| |||| ||||||||  ||||||| ||| || |||||||||||| |||||||||    
T  9927429 tcctttatcttttgcttgtggatttgtgcttttcactttgattcctagattaaatctaggtgctgttattgttgattattgcttgtgtttactttgatat 9927330  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| | ||||||||| ||||||||||||| | ||||  |||||||  |||||||| |||||||||||||    
T  9927329 tggtaactactttcctttgctccacacatcatagtttatattggtgcgagttttgagtccgaattcacaa 9927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 4588056 - 4588318
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||  ||||| || || ||| ||||| |||||||||| |||||||||| |||||| |||||| |||||||||| ||||||    
T  4588056 tcattgatagtggattggagagaacaatctctcccccataataggtgaagttggaccaaactgggtaaacatttcatggtgtgtttgtttctcctctctc 4588155  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||| |||||  ||||||||||||||| ||| ||||||| | ||| |||   |||||||| ||| ||||| ||||||||||| ||||    
T  4588156 tttatcttttgcttgtgattttgtgcttttcactttgattcctatattagatattggttttg---ttattgttgttgtttgtgattgctttgatagtggt 4588252  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaag-ttttgaatccgaattcacaa 265  Q
    || || |||||| |||||||||||||   || || |||||||| || |||||| |||||||||||||    
T  4588253 tactattttcctttgctccacacatcaaagtatt-attggtgtgagtttttgagtccgaattcacaa 4588318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 29254594 - 29254819
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc 100  Q
    ||||||||||||||||||||| ||||| ||||| | | ||||||||||||||||||||||||| | || |  ||||||| |||||| ||||  |||||||    
T  29254594 ttgatagtggattggagagatcaatctctctcccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctattctctcc 29254693  T
Q  101 --ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
      ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||  ||| |||||||  |||| |||||||    
T  29254694 atttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattattgtcgttgtttgtgttcactttaatattgg 29254793  T
Q  199 ttattactttcctctgctccacacatc 225  Q
    ||| |||||| || |||||||||||||    
T  29254794 ttactacttt-ctttgctccacacatc 29254819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 34570485 - 34570220
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||| |||||||| |||||||||| | || |  ||||||| ||||||  |||||||||    
T  34570485 tcattgatagtggattggagagatcaatctctcccccagattaggttaagttggatcgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 34570386  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||||  ||||||||||||||||||||  |||||||||||||||  || ||||||||||||| |||||||| ||| || ||| |||||||   |||||||    
T  34570385 tccttttatcttttgcttgtggttttgtgcttttcactttgattcttagattagatctaggtgttgttattgttgattattgtttgtgttcattttgata 34570286  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattc 261  Q
    ||||||| ||||||||| ||||||||||||| | ||||  |||||||| | ||||||||||||||||    
T  34570285 ttggttactactttcctttgctccacacatcatagtttatattggtgtga-ttttgaatccgaattc 34570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 37740722 - 37740992
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | | |||||||||||||||||||| || | || || || |||| ||||||  |||||||||    
T  37740722 tcattgatagtggattggagagatcaatctctcccccagatttggtcaagttggaccgaactgtgtcaacaattttttgtgtgtttgttcctctcttctc 37740821  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| || ||||  ||||||||    
T  37740822 tccctttatcttttgcttgtggttttgtgcttttcactttgattcctacattagatctaggtgctgttattgttgattattgattctgttcactttgata 37740921  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||| ||||    
T  37740922 ttgattactactttcctgtgctccacacatcatagtttgtattggtgtgagttttgagtccgaatttacaa 37740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 48143140 - 48143392
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||| |||||||| | || |  ||||||| ||||||  ||||||||    
T  48143140 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggtgaacaatctttggtgtgtttgtttctctcttct 48143239  T
Q  97 ctcc--ttatcttttgcttgtggttttgaac----ttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctt 189  Q
    ||||  |||||||||||||||| |||||  |    |||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  |||    
T  48143240 ctccttttatcttttgcttgtgattttgtgcttttttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactt 48143339  T
Q  190 tgatattggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  48143340 tgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 48143392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 265
Target Start/End: Original strand, 24969801 - 24970028
Alignment:
Q  39 agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttga---acttttcacttt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||| |||||||||     |||||||||     
T  24969801 agtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgtttctcttctcactttatcgtttgcttatggttttgagttttttttcactta 24969900  T
Q  136 gattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttca 235  Q
    ||||| || ||||||||||||| |     || ||||| ||| ||||| ||  |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  24969901 gattagtagattagatctaggtgtctactttcttgttgttggttgtgattattttgatattggttactactttcctttgct-cacacatctttgttttca 24969999  T
Q  236 ttggtgtaagttttgaatccgaattcacaa 265  Q
    |  |||| | |||||| | |||||||||||    
T  24970000 tcagtgtga-ttttgagttcgaattcacaa 24970028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5370154 - 5369906
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgttt--ctcttct 96  Q
    |||||||||||||| | ||||||| ||||| || |||| ||||||||||||| ||||||||||| || | || |  ||| ||| |||||||  |||||||    
T  5370154 tcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctttgatgtgtttgtttatctcttct 5370055  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  |||||||    
T  5370054 ctccttttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgat 5369955  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||| ||| ||||||||| | ||||||||||| | ||||  ||||||||    
T  5369954 attgattactactttcctttactccacacatcatagtttgtattggtgt 5369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 52095430 - 52095164
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctc 99  Q
    ||||||||||||||||||||| ||||| || |||| |||||| |||||| |||||||||||||| | || || ||||||| |||||||||||  ||||||    
T  52095430 ttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggaccgaactgggtgaacaatttttggtgtgtttgtttctctcttctctc 52095332  T
Q  100 ctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatatt 196  Q
    |||  ||||||| ||||||||||||  |||||| |||||| | ||| ||||||||||||| |||||||| ||| || || ||||||||  ||||||||||    
T  52095331 cttttatcttttccttgtggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttgattattacttgtgttcactttgatatt 52095232  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | ||| ||||||||| || ||||||| || | ||||  |||||||| | |||||| |||||||||||||    
T  52095231 gattactactttcctttgttccacacgtcatagtttgtattggtgtga-ttttgagtccgaattcacaa 52095164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5207913 - 5207693
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgt--atttgtttctcttctc 97  Q
    ||||||||||||||||||| |||| ||||| ||||| | |||||||||| |||||| ||| ||||||| ||||| |||||||  ||||||||||||||||    
T  5207913 tcattgatagtggattggaaagatcaatctctctcccagagtaggtcaatttggactgaattgggtaaacatttattggtgtgtatttgtttctcttctc 5207814  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    |  |||||| |||| ||||||||||  |||||||| |||||| |||||||||||||||||    ||  ||||||| ||||||| | || |||||||||      
T  5207813 tatttatctgttgcatgtggttttgtgcttttcac-ttgattcctaaattagatctaggt----ttgatattgttgttgcttgaggttactttgatatca 5207719  T
Q  198 gttattactttcctctgctccacaca 223  Q
     ||| ||||||||| |||||||||||    
T  5207718 attactactttcctttgctccacaca 5207693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5429776 - 5429989
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||| ||||||||||||||||||| | || |  ||| ||| ||||||  |||||||||    
T  5429776 tcattgatagtggattggagagatcaatctctcccccagattaggttaagttggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctc 5429875  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||    
T  5429876 tccctttatcttttacttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgata 5429975  T
Q  195 ttggttattacttt 208  Q
    ||| ||| ||||||    
T  5429976 ttgattactacttt 5429989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 54199977 - 54199710
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||| ||| ||||||| | ||| || || | | ||||||||||||||| ||||||||| | || || ||||||| ||||||  |||||||||    
T  54199977 tcattgatagtgaattagagagatcattctctcccccagattaggtcaagttggac-gaactgggtcaacaatttttggtgtgtttgttcctctcttctc 54199879  T
Q  98 tcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatat 195  Q
    ||||| || |||||||||||| ||||  |||||||||||||||  || |||||||||||||  |||||||  || || |||||||||||  ||||||||     
T  54199878 tcctttatattttgcttgtggatttgtgcttttcactttgattcttagattagatctaggtgatgttattgctgattattgcttgtgttcactttgatac 54199779  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||| |||||||||||||    
T  54199778 tggttactactttcctttgctccatacatcatcgtttgtattggtgtga-ttttgagtccgaattcacaa 54199710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21703906 - 21703784
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||| ||||||||||||| || ||||| || |||||||||||||  ||| ||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  21703906 tcattgacagtggattggagatatcaatctatccccatagtaggtcattgtttgaccgaactgggtaaacatttcttgatgtgtttgtttctcttctctc 21703807  T
Q  100 cttatcttttgcttgtggttttg 122  Q
     |||| ||||||||||| |||||    
T  21703806 tttatattttgcttgtgattttg 21703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51337161 - 51337283
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||| ||| ||||||| ||||| || | || | ||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||     
T  51337161 tcattgatagtgtattagagagatcaatctctcccacacattaggtcaagttggaccgaactgggtaaacatttcgtggtgtgtttgtttatcttctctt 51337260  T
Q  100 cttatcttttgcttgtggttttg 122  Q
     |||||||||||||||| |||||    
T  51337261 tttatcttttgcttgtgattttg 51337283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 270
Target Start/End: Complemental strand, 52082659 - 52082460
Alignment:
Q  75 ttggtgtatttgttt--ctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg 170  Q
    ||||||| |||||||  |||||||||||||  |||||||||||||||||||   ||||||  ||||||| ||| || ||||||||||  ||||||| |||    
T  52082659 ttggtgtgtttgtttatctcttctctccttttatcttttgcttgtggttttatgcttttctttttgattcctagataagatctaggtgctgttattgttg 52082560  T
Q  171 ttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaa 269  Q
     || |||||||||||  ||||||||||||||| ||||||||| || |||||||||| |  |||  |||||||| | |||||| ||||||||||||| |||    
T  52082559 attattgcttgtgttcactttgatattggttactactttcctttgttccacacatcataatttgtattggtgtga-ttttgagtccgaattcacaacaaa 52082461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41964513 - 41964594
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  41964513 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgagcatttcttggtgt 41964594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 13992364 - 13992132
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||| ||| | || |  ||||||| |||||||||||  |||    
T  13992364 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaatctttggtgtgtttgtttctctcttct 13992265  T
Q  97 ctcc---ttatctttt-gcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttg 191  Q
    ||||   ||||||||| ||||||| ||| |  ||||||||||||||  ||| |||||||||||||  ||||||| ||| || |||||||   |  |||||    
T  13992264 ctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttg 13992166  T
Q  192 atattggttattactttcctctgctccacacatc 225  Q
     ||||||||| ||||||||| |||||||||||||    
T  13992165 ttattggttactactttcctttgctccacacatc 13992132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6656053 - 6656134
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||| ||||| | |||||||||||||    
T  6656053 tcattgatagtggattggagagatcaatctctcatccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 6656134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40632542 - 40632623
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || || | |||| |||||||||||||||||||||||| |||||||||||||    
T  40632542 tcattgatagtggattggagagatcaatctctcctctaaagtaagtcaagttggaccgaactgggtaaacatttcttggtgt 40632623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50673918 - 50673837
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||| ||| | |||||||||||||    
T  50673918 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactaggtgaacatttcttggtgt 50673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29056496 - 29056610
Alignment:
Q  40 gtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgatt 139  Q
    ||||||| | || |||||||||| |||| || |||||||||| |||||||||||| |||| |||||||||| |||||||||||   ||||||| ||||||    
T  29056496 gtaggtccattttgaccgaactgtgtaaacacttcttggtgtgtttgtttctcttttctctttatcttttgtttgtggttttgtgtttttcac-ttgatt 29056594  T
Q  140 actaaattagatctag 155  Q
     ||| |||||||||||    
T  29056595 cctagattagatctag 29056610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29999877 - 29999720
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||||||||||| | ||    ||||||| ||||||  ||||||||    
T  29999877 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca----ttggtgtgtttgtttctctcttct 29999782  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 157  Q
    ||||  || |||||||||||||| ||||   ||||| |||||||| ||| |||||||||||||    
T  29999781 ctccttttgtcttttgcttgtgg-tttgtgtttttctctttgattcctagattagatctaggt 29999720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8648236 - 8648317
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| |||||||| | |||||||||||||    
T  8648236 tcattgatattggattggagagatcaatctctcctccagagtaggtcaagttggaccaaactgggtgaacatttcttggtgt 8648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12745385 - 12745266
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||| ||    
T  12745385 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttttc 12745286  T
Q  98 tcc--ttatcttttgcttgt 115  Q
    |||  |||||||||||||||    
T  12745285 tccttttatcttttgcttgt 12745266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41639523 - 41639604
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||| ||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||| || | |||||||||||||    
T  41639523 tcatcgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgagtgaacatttcttggtgt 41639604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 265
Target Start/End: Original strand, 5350055 - 5350266
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 148  Q
    ||||||| ||| ||||||| ||||| ||||||| ||||||||||||||||| |||||||||| |||| || |||   ||||||| |||||| ||  || |    
T  5350055 gttggactgaattgggtaaacatttattggtgtgtttgtttctcttctctcgttatcttttgtttgtagtcttgtgtttttcac-ttgattcctgtatga 5350153  T
Q  149 gatctaggtattgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtt 247  Q
    ||||||||| |||||||| ||||| || | || ||||   ||| |||||||||| ||||||||| | || |||||| ||  ||||  |||||||| || |    
T  5350154 gatctaggt-ttgttattgttgttgttacgtgatgtt--attttatattggttactactttcctttacttcacacacctaagttt--attggtgtgagat 5350248  T
Q  248 ttgaatccgaattcacaa 265  Q
    |||| |||||||||||||    
T  5350249 ttgagtccgaattcacaa 5350266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 267
Target Start/End: Complemental strand, 48142408 - 48142186
Alignment:
Q  39 agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgat 138  Q
    |||||||||| |||||  || || ||||| ||||| ||||||| ||||||||||||||||| |||||||||| |||||||||     ||||||| |||||    
T  48142408 agtaggtcaatttggagagagctaggtaaacattttttggtgtgtttgtttctcttctctctttatcttttgattgtggtttaatgtttttcac-ttgat 48142310  T
Q  139 tactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattg 238  Q
    | ||| ||||    | | | |||||||| ||| | ||| |||   || |||| |||||||||||||||||||| ||||||||||||||  ||||| ||||    
T  48142309 tcctagatta----ttgttgttgttattgttgctgttgtttgatgttactttaatattggttattactttcctttgctccacacatctaagtttt-attg 48142215  T
Q  239 gtgtaagttttgaatccgaattcacaata 267  Q
    |||| | || |  |||| |||||||||||    
T  48142214 gtgtgatttatttatcctaattcacaata 48142186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 3913782 - 3913878
Alignment:
Q  104 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 203  Q
    |||||| |||||||||||  |||||||||||||||| ||| ||||||| ||| |   | | |||||||| |||||||||||| |||||||||||||||||    
T  3913782 tcttttacttgtggttttatacttttcactttgattcctagattagatatagat---gctcttattgttattgcttgtgtttactttgatattggttatt 3913878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8665505 - 8665586
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||||||||||||| |||| |||   |||||||||||||    
T  8665505 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccaaactaggtgtacatttcttggtgt 8665586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12073489 - 12073571
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||  ||||||||||||| ||| | |||||||||||||    
T  12073489 tcattgatagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaacatttcttggtgt 12073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 379479 - 379559
Alignment:
Q  3 attgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||||||| | | |||||||||||||    
T  379479 attgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgt 379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 39593754 - 39593647
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 148  Q
    |||||||  ||||||||||  | |||||||||| ||||| |||| ||||| ||||||||||||||| |||||||  |||||   |||| || ||| ||||    
T  39593754 gttggactaaactgggtaaataattcttggtgtgtttgtgtctcctctcttcttatcttttgcttgcggttttgtgcttttacatttggtttctagatta 39593655  T
Q  149 gatctagg 156  Q
    ||||||||    
T  39593654 gatctagg 39593647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2209811 - 2209877
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||||  |||||||||||||||||    
T  2209811 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggt 2209877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27417036 - 27416974
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactg 62  Q
    |||||||||||||||||||||||| ||||| | | ||| | ||||||||||||||||||||||    
T  27417036 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactg 27416974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35662538 - 35662600
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactg 62  Q
    |||||||||||||||||||||||| ||| | | ||| | ||||||||||||||||||||||||    
T  35662538 tcattgatagtggattggagagatcaatatctcctcaagagtaggtcaagttggaccgaactg 35662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46703598 - 46703680
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||| |||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||| ||||| | |||||||||||||    
T  46703598 tcatttatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaacatttcttggtgt 46703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54883117 - 54883199
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggt-aatcatttcttggtgt 81  Q
    |||||||||||||||||||| ||| ||||| | ||||| | || |||||||||||||||||||||| ||  ||||||||||||    
T  54883117 tcattgatagtggattggagggatcaatctctcctccagattaagtcaagttggaccgaactgggtcaacaatttcttggtgt 54883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3913545 - 3913642
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    |||||||||||||||||||||||| ||||| || | | |||| || |||||| | |||||||||| | || |  ||||||| || |||||||||||||    
T  3913545 tcattgatagtggattggagagatcaatctctccctagagtatgtaaagttgtatcgaactgggtcaacaatctttggtgtgttcgtttctcttctct 3913642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 28468761 - 28468811
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  28468761 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 28468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 24741800 - 24741765
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttt 248  Q
    |||||||||||||||||||||||||||||| |||||    
T  24741800 tgctccacacatctttgttttcattggtgtgagttt 24741765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 29999708 - 29999653
Alignment:
Q  187 ctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  29999708 ctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 29999653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31495387 - 31495296
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    ||||||||||| |||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  31495387 tcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttt 31495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13009515 - 13009453
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactg 62  Q
    ||||||||||||||||||||||||  |||| | ||||| | ||||||||||| ||||||||||    
T  13009515 tcattgatagtggattggagagatcgatctctcctccaaattaggtcaagttagaccgaactg 13009453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50262772 - 50262706
Alignment:
Q  1 tcattgatagtggattggagagataaatcttt-ctccatagtaggtca-agttggaccgaactgggt 65  Q
    ||||||||||| ||||||||| || ||||||| ||||| |||||||||  |||||||||||||||||    
T  50262772 tcattgatagttgattggagatatcaatctttcctccagagtaggtcattgttggaccgaactgggt 50262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 31985871 - 31985917
Alignment:
Q  217 ccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||    
T  31985871 ccacacatctttgtttacattggtgtgagttttg--tccgaattcacaa 31985917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 34496057 - 34496086
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  34496057 tgctccacacatctttgttttcattggtgt 34496086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 1983515 - 1983562
Alignment:
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||| ||||    
T  1983515 attgattattactt-cctttgctccacacatctttgttttcatttgtgt 1983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 37754960 - 37754908
Alignment:
Q  70 atttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 122  Q
    ||||||| |||| ||||||| ||||||||| ||||||| || |||||||||||    
T  37754960 atttcttagtgtgtttgtttttcttctctctttatcttatgtttgtggttttg 37754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 8e-77; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 16455718 - 16455982
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| |||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  16455718 tcattgatagtggattggagagatcaatctctctcccatagtcggtcaaattggaccaaactgtgtaaacatttcttggtgtatttgtttctcttctctc 16455817  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||| |||||||||||||  |||||||||||||||| | ||||||||||  | |||||||||||||| ||||||  |||| |||||||||||||    
T  16455818 tttatcttttacttgtggttttgagtttttcactttgattaccagattagatctatatgttgttattattgttgttgcttacgtttactttgatattggt 16455917  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||| | |||| |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  16455918 tactactttcatttgctacacaaatctttgttttcattggtgtaa-ttttgagtccgaattcacaa 16455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 23555336 - 23555073
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    |||||||||||||||||||||| | ||||| || |||||||||||||||||||| ||||||| |||| ||||||||||||  |||||||||||||||||     
T  23555336 tcattgatagtggattggagagttcaatctctccccatagtaggtcaagttggatcgaactgagtaaacatttcttggtgcgtttgtttctcttctctct 23555237  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    |||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||||||| |||||| |||| ||    
T  23555236 ttatgttttgcttgtggttttgagcttttcactatgattcctaaattagatctaggtgttgttattgttgttgttgcttgtgtttactttgacattgatt 23555137  T
Q  201 attactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | |||||| || ||||||||||||| ||||||  |||||||  | |||||| |||||||||||||    
T  23555136 actacttttctttgctccacacatcattgtttctattggtgcga-ttttgagtccgaattcacaa 23555073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 50167246 - 50167021
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||| ||||||||||||||||| ||| | || |  ||||||| |||||||||||||||||    
T  50167246 tcattgatagtggattggagagatcaatctctcccccagattagctcaagttggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctc 50167147  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||| |||||||||||||    
T  50167146 tttatcttttgcttgtggttttgaacttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgtttactttgatattggt 50167047  T
Q  200 tattactttcctctgctccacacatc 225  Q
    || ||||||||| |||||||||||||    
T  50167046 tactactttcctttgctccacacatc 50167021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 7 - 265
Target Start/End: Complemental strand, 40122261 - 40122003
Alignment:
Q  7 atagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatc 105  Q
    |||||||||| ||||||| ||||| || || ||| ||||||||||||||||||||| ||| | || |  ||||||| ||||||||||||||||| |||||    
T  40122261 atagtggattagagagatcaatctctcccccatattaggtcaagttggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatc 40122162  T
Q  106 ttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattac 205  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||| ||||||||||| |||    
T  40122161 ttttgcttgtggttttgagcttttcactttgattactaaattagatctaggtgttgttattattgttgttgcttgtgttcacttagatattggttactac 40122062  T
Q  206 tttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| |||||||| |||| | ||||  |||||||| | |||||| |||||||||||||    
T  40122061 tttcctttgctccacgcatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 40122003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 834238 - 833972
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||||||||||||||||||  |||| || || | ||||||||||||||||||||||||||| | || |  ||||||| |||||||||||  ||||    
T  834238 tcattgatagtggattggagagatctatctctcccccagagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 834139  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||| | | ||||||||| ||| |||||||| ||||| |||||||||||| |||||||||||    
T  834138 tctttatcttttgcttgtggttttgagcttttcactttgattcccagattagatcttggtgttgttattgttgttattgcttgtgtttactttgatattg 834039  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  834038 gttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 833972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 265
Target Start/End: Complemental strand, 13138046 - 13137782
Alignment:
Q  2 cattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    |||||||||||||||| |||||  ||||| || || | |||||||||  |||||||||||||||| | || |  ||| ||| |||||||||||||||||     
T  13138046 cattgatagtggattgaagagagcaatctctcccctagagtaggtcatattggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctct 13137947  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||    
T  13137946 ttatcttttgcttgtggttttgaggttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtt 13137847  T
Q  201 attactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | ||||||||| ||||||||||||| |  |||  |||||||| |||||||| |||||||| ||||    
T  13137846 actactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccgaatttacaa 13137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 45644425 - 45644160
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||| | || || | | ||||||||||||||||||||||||| | || |  |||||||  ||||||||||||||||    
T  45644425 tcattgatagtggattggagagatcaatatctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgcttgtttctcttctctc 45644326  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     |||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||    
T  45644325 tttatcttttgtttgtggttttgagcttttcactttgattgctagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattgg 45644226  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||||| | ||||  ||| |||| | |||||| |||||||||||||    
T  45644225 ttactactttcctttgctccacacatcatagtttgtatttgtgtga-ttttgagtccgaattcacaa 45644160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 28223492 - 28223223
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| |||||   |||||||||    
T  28223492 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctc 28223393  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  |||||||||||||||| |||||   |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||    
T  28223392 tccctttatcttttgcttgtgattttgtgtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatat 28223293  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||| | ||||||||||||| | ||||  |||||| | |||||||| |||||||||||||    
T  28223292 tggttactactttcgtttgctccacacatcatagtttgtattggtctgagttttgagtccgaattcacaa 28223223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 28265622 - 28265365
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||    
T  28265622 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctcttt 28265523  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttat 202  Q
    |||||||| |||||||||||| ||||| ||||||||||||| ||||||||||| | |||||||||||||| |||||||||||  |||||||||||| ||     
T  28265522 atcttttggttgtggttttgagctttttactttgattactagattagatctagatgttgttattattgttgttgcttgtgttcactttgatattggctac 28265423  T
Q  203 tactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattc 261  Q
    || |||||| | ||||||||||| | ||||  |||||||| | |||||| |||||||||    
T  28265422 tattttcctttactccacacatcatagtttgtattggtgtga-ttttgagtccgaattc 28265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 50169281 - 50169039
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| |||||| ||||| || || | | ||||||||||||||||||||||| | | || |  ||||||| |||||||||||||||||    
T  50169281 tcattgatagtggattgaagagatcaatctctcccctagattaggtcaagttggaccgaactggatcaacaatctttggtgtgtttgtttctcttctctc 50169182  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||| ||| |||||||  |||||||||||||    
T  50169181 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattattgttgttgtttgtgttcactttgatattggt 50169082  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    || ||||||| | |||| |||||||| | ||||  ||||||||    
T  50169081 tactactttcatttgcttcacacatcatagtttgtattggtgt 50169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 46065015 - 46065276
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| |||||||||||||||||| ||||| || || | |||||||||||||||| |||||||||||| || |  ||||||| |||||||||||||||||    
T  46065015 tcattcatagtggattggagagatcaatctctcccccagagtaggtcaagttggatcgaactgggtaaacaatctttggtgtgtttgtttctcttctctc 46065114  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| | |||||| || |||| || ||||||||||||| |||||||||||||| |||||||| ||| |||||| ||||||    
T  46065115 tttatcttttgcttgtggttttgagcctttcacatt-attagtagattagatctaggtgttgttattattgttgttgcttgtatttactttga-attggt 46065212  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||  ||| || | ||||||||||||||||||||||||| ||||  ||||||| |||||||||||||    
T  46065213 tacaactatcgtttgctccacacatctttgttttcatt-gtgt-ggttttgagtccgaattcacaa 46065276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 28220297 - 28220028
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||   |||||||||    
T  28220297 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctc 28220198  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||  |||| ||||    
T  28220197 tccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttaatat 28220098  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| || ||| || || |||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  28220097 tggttactaattttctttgttccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 28220028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3847192 - 3846962
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||||||||||||||||||  |||| ||| ||| | ||||||||||||||||||||| ||| | || |  ||||||| |||||||||||  ||||    
T  3847192 tcattgatagtggattggagagatccatctcttccccagattaggtcaagttggaccgaacttggtcaacaatctttggtgtgtttgtttctctcttctc 3847093  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttat---tattgtttttgcttgtgtttgctttgata 194  Q
    || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||   ||||||| |||||||||||  ||||||||    
T  3847092 tctttatcttttgcttgtggttttgagcttttcactttgattactatattagatctaggtgttgttattattattgttgttgcttgtgttcactttgata 3846993  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||| ||||||||| | |||||||||||    
T  3846992 ttggttactactttcctttactccacacatc 3846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 15820404 - 15820660
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||| |||| |||||||||||| || |||| |||||||||||||||| |||||| ||||| ||||| ||||||| |||||||||||||||||    
T  15820404 tcattgatagtgcattgaagagataaatctctcatccagagtaggtcaagttggatcgaactaggtaaacatttattggtgtgtttgtttctcttctctc 15820503  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
    ||||||  ||||||||| || ||| ||||||  ||||||| ||| ||||||||||||| |||      ||||| |||||||||||| |||||||||| ||    
T  15820504 cttatccattgcttgtgtttatgagcttttctatttgattcctatattagatctaggtgttg------ttgttgttgcttgtgtttactttgatattagt 15820597  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaat 266  Q
    || ||||||||| ||||||||||||||  ||||  |||||||  |||||||| ||||||||||||||    
T  15820598 tactactttcctttgctccacacatctaagttt--attggtg--agttttgagtccgaattcacaat 15820660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3156962 - 3157192
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  3156962 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 3157061  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||    
T  3157062 tccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgata 3157161  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||| ||||||||| |||||||||||||    
T  3157162 ttggttactactttcctttgctccacacatc 3157192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 196979 - 196751
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatag--taggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    ||||||||||||||||||||||||  |||| || ||  ||  ||||||||||||||||||||||| | | || |  ||||||| ||| ||  ||||||||    
T  196979 tcattgatagtggattggagagatttatctctccccccagattaggtcaagttggaccgaactggatcaacaatctttggtgtgtttttttctctcttct 196880  T
Q  97 ctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    ||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||  ||||||||||    
T  196879 ctctttatcttttgcttgtggttttgagcttctcactttgattactagattagatgtaggtgttgttattattgttgttgcttgtgttcactttgatatt 196780  T
Q  197 ggttattactttcctctgctccacacatc 225  Q
    ||||| || |||||| |||||||||||||    
T  196779 ggttactattttcctttgctccacacatc 196751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 4552708 - 4552454
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||| |||||||||||||| ||||| || | || ||||||||||||||||||||||||||| | || |  ||||||| ||||||||||||         
T  4552708 tcattgataatggattggagagatcaatctctccctcagagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctt----- 4552614  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
      |||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||| || ||||||||| |||||| ||||||    
T  4552613 --tatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgttgttacttgtgtttactttgaaattggt 4552516  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattc 261  Q
    || ||||||||| | || ||| |||| | ||||  |||||||| |  ||||| |||||||||    
T  4552515 tactactttcctttacttcacgcatcatagtttgtattggtgtgaaatttgagtccgaattc 4552454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 30476517 - 30476248
Alignment:
Q  1 tcattgatagtggattggagagataaatcttt-ctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||| ||||||||| |||| ||||| | | |||||  |||| ||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  30476517 tcattgatactggattggacagatcaatctctaccccatatgaggttaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 30476418  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||||  ||||||| ||||||||||||| |||||||||||||||| || ||||| |||| || |||||||||||||| |||||||||||| |||||| ||    
T  30476417 tccttttatcttttacttgtggttttgagcttttcactttgattattagattaggtctaagtgttgttattattgttgttgcttgtgtttactttgaaat 30476318  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| | ||||||||||  | ||||  |||||||| |||||||| | |||||||||||    
T  30476317 tggttactactttcctttactccacacattatagtttgtattggtgtgagttttgagttcgaattcacaa 30476248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 13659407 - 13659153
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | ||||||| ||||||||||||||||||| | || |  |||||||||||||||||||||||||    
T  13659407 tcattgatagtggattggagagatcaatctctcccccagagtaggttaagttggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctc 13659308  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| ||||| ||||||         |||||||||||| ||||||| |||||    
T  13659307 tttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgtta---------ttgcttgtgtttactttgatgttggt 13659218  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||||||||  | ||||  |||| ||| | |||||| |||||||||||||    
T  13659217 tactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagtccgaattcacaa 13659153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 8550858 - 8550581
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt------ctc 92  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||       ||    
T  8550858 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgttttctctcttc 8550759  T
Q  93 ttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttg 191  Q
    ||||||| ||||||| |||||||| |||||   |||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  |||||    
T  8550758 ttctctctttatcttgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttg 8550659  T
Q  192 atattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 270  Q
    |||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||||||||||| ||||    
T  8550658 atattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaaat 8550581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 35 - 265
Target Start/End: Original strand, 41361046 - 41361276
Alignment:
Q  35 ccatagtaggtcaagttggaccgaactgggtaatcatt-tcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcact 133  Q
    |||||||||||||  |||||||||||| ||| | || | ||||||||| ||||||||| ||||| | |||||||||| |||||||||||| ||||| |||    
T  41361046 ccatagtaggtcatattggaccgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttact 41361145  T
Q  134 ttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgtttt 233  Q
    |||||| ||| ||||||| ||||| |||||||| ||||| || ||||||||| ||||||||||| ||| ||||||||| ||||||||||||| | |||||    
T  41361146 ttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagtttt 41361245  T
Q  234 cattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||   |||||||| |||||||||||||    
T  41361246 -attggttagagttttgagtccgaattcacaa 41361276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 10925323 - 10925588
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||||||| || ||||| || || | | ||||| |||||||| |||||||||| | || |  ||| ||| ||||||| |||||||||    
T  10925323 tcattgatagtggattggagaaatcaatctctcccctagattaggtaaagttggatcgaactgggtcaacaatctttgatgtgtttgtttatcttctctc 10925422  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatattgg 198  Q
     |||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||| |||||||| ||| || |||||||||||  |||||||||||     
T  10925423 tttatcttttgcttgtggttttgagtttttccctttgattactagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattga 10925522  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||| | | ||||  |||| ||| | |||||| |||||||||||||    
T  10925523 ttactactttcctttgctccacacaacatagtttgtattgttgtga-ttttgagtccgaattcacaa 10925588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 37559936 - 37559666
Alignment:
Q  4 ttgatagtggattggagagataaatctttctccatag--taggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctc 99  Q
    ||||||||| ||||||||||| ||||| || || |||  ||||||||||||||||||||| ||| | || |  ||||||| ||||||  |||||||||||    
T  37559936 ttgatagtgaattggagagatcaatctctccccctagattaggtcaagttggaccgaacttggtcaacaatctttggtgtgtttgttcctctcttctctc 37559837  T
Q  100 c---ttatcttttgcttgtggttttgaacttttcactttgattactaaatt-agatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |   ||||||||||||||||||||||  ||||||||||||||| ||| ||| ||||||||||  ||||||| ||| || |||||||||||  ||||||||    
T  37559836 ccctttatcttttgcttgtggttttgtgcttttcactttgattcctagatttagatctaggtgctgttattgttgattattgcttgtgttcactttgata 37559737  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||| ||||| | ||||  |||||||| |||||||| |||||||||||||    
T  37559736 ttggttactactttcctttgctccagacatcatagtttatattggtgtgagttttgagtccgaattcacaa 37559666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 265
Target Start/End: Complemental strand, 928007 - 927787
Alignment:
Q  40 gtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgatt 139  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  928007 gtaggtcaagttagaccgaactgggtaaacatttctttgtgtgtttgtttctcttctctctttatcttttgtttgtggttttgaacttttcactttgatt 927908  T
Q  140 a-ctaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattg 238  Q
    | ||| |||||||||| || |||   || ||||| ||| ||||| || |||||||||||||||  |||| ||| | ||||||||||| | ||||  ||||    
T  927907 atctatattagatctaagttttg---ttgttgttgttgtttgtgattactttgatattggttaccacttccctttactccacacatcatagttt--attg 927813  T
Q  239 gtgtaagttttgaatccgaattcacaa 265  Q
     ||| | |||||| |||||||||||||    
T  927812 atgtga-ttttgagtccgaattcacaa 927787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 1833685 - 1833874
Alignment:
Q  75 ttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttt 174  Q
    ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| |    
T  1833685 ttggtgtgtttgtttattttctctctttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgt 1833784  T
Q  175 tgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||| |||||| ||||||||  |||||||| | ||||||| ||| | ||||  |||||||| | | |||| |||||||||||||    
T  1833785 tgcttgtgtttactttgaaattggttacgactttcctttactccacagatcatagtttgtattggtgtga-tattgagtccgaattcacaa 1833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 49918447 - 49918694
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||| ||| | || |  ||||||| ||||||  |||||||||    
T  49918447 tcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactaggtcaacaatctttggtgtgtttgttcctctcttctc 49918546  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |||||  ||||||||||||||| ||||  ||||||| ||||||| ||| ||||||| |||||  ||||||| ||| || |||||||||||  ||||||||    
T  49918547 tccttttatcttttgcttgtggatttgtgcttttcattttgattcctagattagatataggtgctgttattgttgattattgcttgtgttcactttgata 49918646  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  49918647 ttggttactactttcctttgctccacacatcatagtttgtattggtgt 49918694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 3189427 - 3189604
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  3189427 tcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 3189526  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtt 172  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  3189527 ctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgtt 3189604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 3198244 - 3198421
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  3198244 tcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 3198343  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtt 172  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  3198344 ctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgtt 3198421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 3207083 - 3207260
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  3207083 tcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 3207182  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtt 172  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  3207183 ctccttttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgtt 3207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 265
Target Start/End: Original strand, 31659337 - 31659604
Alignment:
Q  3 attgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctctt--ctctc 99  Q
    |||||||||||||||||||||| ||||| || | || | ||||||||||||||||||||||||| | || |  ||||||| ||| || |||||  |||||    
T  31659337 attgatagtggattggagagatcaatctctccctcagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttattcctcttttctctc 31659436  T
Q  100 ctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatatt 196  Q
    |||  ||||||||||| ||||||||  ||||| ||||||||| ||| |||||||| |||| |||||||| ||| || |||||||||||   |||||||||    
T  31659437 cttttatcttttgcttatggttttgtgctttttactttgattcctagattagatcaaggtgttgttattgttgattattgcttgtgttcattttgatatt 31659536  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| |||||| || | ||||||||||| |  |||  |||||||| | |||||| |||||||||||||    
T  31659537 ggttactacttttcttttctccacacatcatattttatattggtgtga-ttttgagtccgaattcacaa 31659604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 8870698 - 8870551
Alignment:
Q  96 tctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||| |||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||| || || |||||||||||||||||| || ||||||||     
T  8870698 tctctttatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattgtttttgcttgtgattactttgatac 8870599  T
Q  196 tggttattactttcctctgctccacacatctttg-ttttcattggtgt 242  Q
    | |||| ||||||||| || ||||||||| |||| |||||||||||||    
T  8870598 tagttactactttcctttgttccacacatatttgtttttcattggtgt 8870551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20762769 - 20763012
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | || || ||||||||||| |||||||||||| ||| | || |  ||||||| ||||||  ||||||||    
T  20762769 tcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggaccgaactaggtgaccaatctttggtgtgtttgtttctctcttct 20762868  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  ||||||||||||||||||||||  ||||||||     || ||| |||||||||||||  ||||||| ||| || |||||||  ||  |||||||    
T  20762869 ctccttttatcttttgcttgtggttttgtgcttttcac-----ttcctagattagatctaggtgctgttattgttgattattgcttgaattcactttgat 20762963  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  20762964 attggttaatactttcctttgctccacacatcatagtttgtattggtgt 20763012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 37503628 - 37503364
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | || ||||||||||| |||||| ||| | || |  ||||||| ||||||  |||||||||    
T  37503628 tcattgatagtggattggagagatcaatctctcccccagattatgtcaagttggatcgaactaggtcaacaatctttggtgtgtttgttcctctcttctc 37503529  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  |||||||||||||| |||||||  ||||||||||| ||| ||| ||||||||||||| ||| |||| ||| || |||||||||||  ||||||||    
T  37503528 tccctttatcttttgcttgcggttttgtgcttttcactttaattcctagattagatctaggtgttgatattgttgattattgcttgtgttcactttgata 37503429  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||      ||||||||| | ||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  37503428 tt-----ctactttcctttactccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 37503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 44455257 - 44455526
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||| ||||||||||||| | |  |  ||||||| ||||||  |||||||||    
T  44455257 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagtttgaccgaactgggtcaacgatctttggtgtgtttgttcctctcttctc 44455356  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    | |  ||||||||||||| ||||||||   |||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||    
T  44455357 ttcctttatcttttgcttttggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgata 44455456  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||  ||||| || | ||||||| ||| | ||||  |||||||| | |||||| | |||||||||||    
T  44455457 ttggttaccacttttcttttctccacatatcatagtttgtattggtgtga-ttttgagtacgaattcacaa 44455526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44646875 - 44646654
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| ||||||||||| |||||| ||||| ||| | | |||||||||| |||||||||||| |||||  |||| ||||||  ||||||||||||   ||    
T  44646875 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaatttggaccgaactaggtaaatattttttggtgcgtttgtttctctt---tc 44646779  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||| |||||  ||||||||||| ||| |||  |||||| ||||| |||||||| ||| | ||||||| | || | || ||||||||    
T  44646778 tttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgttatttttggtgttgcttgaggtttcattaatattggt 44646681  T
Q  200 tattactttcctctgctccacacatct 226  Q
    || ||||||||| |||| |||||||||    
T  44646680 tactactttcctttgctacacacatct 44646654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 13316423 - 13316194
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  || |||  ||||||  ||||||||    
T  13316423 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttagtgagtttgtttctctcttct 13316324  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  |||| |||||||||||| ||||   |||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  13316323 ctccttttatattttgcttgtgg-tttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 13316225  T
Q  194 attggttattactttcctctgctccacacat 224  Q
    |||| ||| ||||||||| ||||||||||||    
T  13316224 attgattactactttcctttgctccacacat 13316194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44650233 - 44650012
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| ||||||||||| |||||| ||||| ||| | | |||||||||| |||||||||||| |||||  |||| ||||||  ||||||||||||   ||    
T  44650233 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaatttggaccgaactaggtaaatattttttggtgcgtttgtttctctt---tc 44650137  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||| |||||  ||||||||||| ||| |||  |||||| ||||| |||||||| ||| | ||||||| | || | || ||||||||    
T  44650136 tttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgttatttttggtgttgcttgaggtttcattaatattggt 44650039  T
Q  200 tattactttcctctgctccacacatct 226  Q
    || |||||| || |||| |||||||||    
T  44650038 tactacttttctttgctacacacatct 44650012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36683777 - 36683892
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| ||| || ||||| || || | ||||||||||||| |||||||||| |||| ||| ||||||||| ||||||| |||||||||    
T  36683777 tcattgatagtggattgtagaaatcaatctctcccccagagtaggtcaagttagaccgaactgagtaaacatctcttggtgtgtttgtttgtcttctctc 36683876  T
Q  100 cttatcttttgcttgt 115  Q
     |||||||||||||||    
T  36683877 tttatcttttgcttgt 36683892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 193708 - 193789
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||| | |||||||||||||    
T  193708 tcattgatagtggattggagagatcaatctcttctccagagtatgtcaagttggaccgaactgggtgaacatttcttggtgt 193789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13547160 - 13547079
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  13547160 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 13547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13549071 - 13548990
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  13549071 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 13548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37168395 - 37168476
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  37168395 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 37168476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 5460003 - 5460203
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    ||||||||||| |||||||||||| ||||| || || | ||||| |||  ||||| | ||||| ||||| ||||||||| ||| ||||||||| ||||||    
T  5460003 tcattgatagtagattggagagatcaatctctcatctagagtagatcattgttgggctgaactaggtaaacatttcttgttgtgtttgtttctattctct 5460102  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||||||||||||||||||  |||| || |||| || ||| ||| ||||||||| ||||| || ||||| ||| ||| | ||  |||||||||||    
T  5460103 ctttatcttttgcttgtggttttgtgctttacattttg-ttcctagattcgatctaggt-ttgttcttgttgttgttgtttgagattattttgatattgg 5460200  T
Q  199 tta 201  Q
    |||    
T  5460201 tta 5460203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 265
Target Start/End: Complemental strand, 37282755 - 37282500
Alignment:
Q  8 tagtggattggagagataaatctttctccat---agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttat 104  Q
    |||||||||||||||||||||||  |||| |   |||||||||| |||||| ||||| | ||| ||||| ||||||  ||||||||||||||||  || |    
T  37282755 tagtggattggagagataaatct--ctcctttggagtaggtcaatttggactgaactagataaacattttttggtgcgtttgtttctcttctctatttct 37282658  T
Q  105 c-ttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 203  Q
    | |||| ||||||||||||   |||||||  ||||| ||| ||||||||||||| |||||||| |||||  | |||||| || |||| |||||  |||||    
T  37282657 cttttttcttgtggttttgcgtttttcac-ctgatttctagattagatctaggt-ttgttattgttgttggtacttgtggttactttcatattaattatt 37282560  T
Q  204 ac-tttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || |||| | |||||||||||| |  ||||  |||||||| | |||||| |||||||||||||    
T  37282559 acttttcttttgctccacacatttaagttt--attggtgtga-ttttgagtccgaattcacaa 37282500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11348795 - 11348872
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttg 77  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||| || | |||||||||    
T  11348795 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgagtgaacatttcttg 11348872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31925778 - 31925697
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||||| ||| | |||||||||||||    
T  31925778 tcattgatagtggattggagagatcaatctctcctctagagtaggtcaagttggaccgaactaggtgaacatttcttggtgt 31925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 8871130 - 8871034
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||||||| ||||| || || |||||||| |||||||||||||| || |||| ||||| ||||| | ||||||||| |||||||    
T  8871130 ttgatagtggattggagagatcaatctctcccccatagtaggccaagttggaccgaattgagtaaacatttattggtatgtttgtttcttttctctc 8871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 51765494 - 51765666
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctctt-- 94  Q
    |||||||||||||||||||||| | ||||| | ||||| |||||| |||| |||||||||||||||| | || |  ||||||| |||||||  |||||      
T  51765494 tcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttcc 51765593  T
Q  95 ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||||||| ||||||||    
T  51765594 ctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttatt 51765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 3460796 - 3460915
Alignment:
Q  3 attgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||| |||||||||||| ||| | |  | | |||||||||| || |||| || | ||||| ||||||||  ||| ||||||||||||||||| ||    
T  3460796 attgatagtcgattggagagatcaatatcttcctagagtaggtcaatttagaccaaattaggtaaacatttcttaatgtgtttgtttctcttctctcttt 3460895  T
Q  103 atcttttgcttgtggttttg 122  Q
    |||||||| |||||||||||    
T  3460896 atcttttgtttgtggttttg 3460915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 2263043 - 2262850
Alignment:
Q  3 attgatagtggattggagagataaatctttctccatag--taggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||| |||||| |||||||| || |||  |||||||  ||||| |||||||| |||| ||||||||||| | ||||||| |||||||||    
T  2263043 attgatagtggattgaagagatcaatctttc-ccttagggtaggtcattgttggtccgaactgagtaaacatttcttggtatgtttgtttttcttctctc 2262945  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
     ||| |||||| |||||| ||||   ||||||| |||||| ||||||||||| | |||| ||||||| |||||  ||||| |  || |||||||||||    
T  2262944 ttta-cttttgtttgtggatttgggtttttcac-ttgattcctaaattagatttgggta-tgttattgttgttgctgcttattgttactttgatattg 2262850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37033143 - 37033077
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  37033143 tcattgatagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaactgggt 37033077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47255411 - 47255329
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||||||||| | |||||||||||||    
T  47255411 tcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 47255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 36683883 - 36683951
Alignment:
Q  172 ttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggt 240  Q
    |||||||||| ||| |||||||||||||||  |||||||| |||||||||||| |||||||| ||||||    
T  36683883 ttttgcttgtttttactttgatattggttaccactttcctttgctccacacatgtttgtttttattggt 36683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 16914193 - 16914124
Alignment:
Q  53 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 122  Q
    ||||||||||||||| || ||||  |||| ||||| ||||||||||| |||||||||||||| |||||||    
T  16914193 gaccgaactgggtaaacaattctatgtgtgtttgtgtctcttctctctttatcttttgcttgcggttttg 16914124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19752783 - 19752844
Alignment:
Q  1 tcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttggaccgaact 61  Q
    |||||||||| ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||    
T  19752783 tcattgatagaggattggagagatcaatctctctcccatattaggtcaagttggaccgaact 19752844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29136344 - 29136425
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtg 80  Q
    |||||||| ||||||||||||||| ||||| | ||||| ||||||||||| |||||||||||| ||| | ||||||||||||    
T  29136344 tcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacatttcttggtg 29136425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37876837 - 37876756
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||| |||||| ||||| || |||| ||||  |||||||| |||||||||||| | |||||||||||||    
T  37876837 tcattgatagtggattgcagagatcaatctctcctccagagtacatcaagttgaaccgaactgggtgaacatttcttggtgt 37876756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 47115270 - 47115347
Alignment:
Q  2 cattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttg 77  Q
    ||||||||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||||||||| | |||||||||    
T  47115270 cattgatagtggattggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaacatttcttg 47115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 28242407 - 28242483
Alignment:
Q  7 atagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||| ||||| || |||| |||||||||  ||||||||||||||||| | |||||||||||||    
T  28242407 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 28242483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7482301 - 7482222
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggt 79  Q
    |||||||||||| ||||||||||| ||||| || | || ||||||||||||||||||||||| ||| | |||||| ||||    
T  7482301 tcattgatagtgaattggagagatcaatctctccttcagagtaggtcaagttggaccgaactaggtgaacatttcatggt 7482222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19754592 - 19754657
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || | || | ||||||||||||||||||| |||||    
T  19754592 tcattgatagtggattggagagatcaatctctccctcagattaggtcaagttggaccgaagtgggt 19754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34603674 - 34603735
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaact 61  Q
    |||||||| |||||||| |||||| ||||| || |||| |||||||||||||||||||||||    
T  34603674 tcattgatggtggattgaagagatcaatctctcctccagagtaggtcaagttggaccgaact 34603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 24203002 - 24203038
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  24203002 tgctccacacatctttgttttcattggtgtgagtttt 24203038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9987298 - 9987364
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    ||||||||||||||||||||||   ||||| | ||||| ||||||||||| ||||||||||||||||    
T  9987298 tcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 9987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 32889320 - 32889274
Alignment:
Q  194 attggttattactttcctctgctccacacatctttgttttcattggt 240  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||||    
T  32889320 attgattatcactttcttttgctccacacatctttgttttcattggt 32889274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42298046 - 42297980
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggt 65  Q
    ||||||||||||||||| |||||| ||||| | ||||| |||||||||  |||||||||||||||||    
T  42298046 tcattgatagtggattgaagagatcaatctctcctccagagtaggtcatggttggaccgaactgggt 42297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 3189620 - 3189708
Alignment:
Q  174 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 263  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3189620 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 3198437 - 3198525
Alignment:
Q  174 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 263  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3198437 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 3207276 - 3207364
Alignment:
Q  174 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 263  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3207276 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 43342367 - 43342270
Alignment:
Q  13 gattggagagataaatctttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctttt 109  Q
    |||||||||||| |||||||||| | ||||| |||   |||| | |||||||||||  |||| ||| |||||| ||||||||| |||| |||||||||    
T  43342367 gattggagagatcaatctttctcaagagtagatcactattgggctgaactgggtaaatattttttgatgtattggtttctcttatctctttatctttt 43342270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 19359080 - 19359116
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19359080 tgctccacacatctttgtttacattggtgtgagtttt 19359116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 19361670 - 19361706
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19361670 tgctccacacatctttgtttacattggtgtgagtttt 19361706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 19380310 - 19380346
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19380310 tgctccacacatctttgtttacattggtgtgagtttt 19380346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 20622305 - 20622217
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  20622305 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttt 20622217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 29651679 - 29651622
Alignment:
Q  207 ttcctctgctccacacatctttgtt-ttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||  |||||||||||||    
T  29651679 ttcctttgctccacacatctttgttattcattggtgtgatttttg--tccgaattcacaa 29651622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 40282477 - 40282565
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  40282477 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttt 40282565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 538122 - 538389
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||| |||||||||||| ||||| || || ||| ||||||||||||||||||||||| | | || |  ||||||| ||| |||||||||||||    
T  538122 tcattgatagtagattggagagatcaatctctcccccatattaggtcaagttggaccgaactggatcaacaatctttggtgtgtttctttctcttctctc 538221  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||| |||||||||||| |||||| ||||||    
T  538222 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgtgtttactttgaaattggt 538321  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaata 267  Q
    |||||||||||| ||||||||||||| | ||||  |||||||| |||||||| || ||||||||||||    
T  538322 tattactttcctttgctccacacatcatagtttatattggtgtgagttttgagtctgaattcacaata 538389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 42926988 - 42927258
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||| ||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  42926988 tcattgacagtggattgaagaaataaatctctctctcatagtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgtttctcttatctc 42927087  T
Q  100 cttatcttt------tgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgat 193  Q
    |||||||||      |||||||||||||||  |||||||||||||| ||| ||||||||||||| |||||||| ||||| |||||||||||| |||||||    
T  42927088 cttatcttttgcttttgcttgtggttttgagtttttcactttgattcctagattagatctaggtgttgttattgttgttgttgcttgtgtttactttgat 42927187  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| |||  ||||||||| |||||||||||||||||||||| ||||| | | |||||| | |||||||||||    
T  42927188 attagttgctactttcctttgctccacacatctttgttttcgttggtatga-ttttgagttcgaattcacaa 42927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 42428501 - 42428237
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||||||||||||||||||||| | || |  || |||| ||||||  ||| |||||    
T  42428501 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttagtgtgtttgttcttcttttctc 42428402  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| || |||||||||||  |||||||||    
T  42428401 tccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgttcactttgatat 42428302  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaatt 260  Q
    |||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| | ||||||    
T  42428301 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagttcgaatt 42428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 8566017 - 8565750
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgttt-ctcttctct 98  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||| ||| | || | |||||||| ||||||| |||||||||    
T  8566017 tcattgatagtggattggagagatcaatctctcacccagattaggtcaagttggaccgaactaggtcaacaat-cttggtgtgtttgttttctcttctct 8565919  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttat---tattgtttttgcttgtgtttgctttgatat 195  Q
    | ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||   ||||||| |||||||||||  ||||| |||    
T  8565918 ctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgttgcttgtgttcactttgttat 8565819  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||| ||||||||||||| | ||||  ||| |||| | |||||||||| |||||||||    
T  8565818 tggttactactttcctttgctccacacatcatagtttatattagtgtga-ttttgaatccaaattcacaa 8565750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 42426306 - 42426032
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||| ||||| ||| | || |  || |||| ||||||  |||||||||    
T  42426306 tcattgatagtggattggagagatcaatctctccccctgattaggtcaagttggactgaactaggtcaacaatcttttgtgtgtttgttcctctcttctc 42426207  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||  |||||||||    
T  42426206 tccctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgttcactttgatat 42426107  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 270  Q
    |||||| ||||||| | ||||||||||||| | ||||  ||| |||| |||||||| | ||||||||||| ||||    
T  42426106 tggttactactttcttttgctccacacatcatagtttgtatttgtgtgagttttgagttcgaattcacaacaaat 42426032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 533866 - 534125
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||||| |||| ||||| || || ||| ||||||||||||||||||||||||| | || |  ||||||| |||| |||||||||||     
T  533866 tcattgatagtggattggaaagatcaatctctcccccatattaggtcaagttggaccgaactgggtcaacaatctttggtgtctttgcttctcttctctt 533965  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||||||||||  |||||||||||||||||| ||      ||||| ||||||||||| || |||||||||| | |||||| ||||||    
T  533966 tttatcttttgcttgtggttttgagattttcactttgattactagat------taggtgttgttattattattgttgcttgtgtctactttgaaattggt 534059  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  534060 tactactttcctttgctccacacatcatagtttctattggtgtgagttttgagtccgaattcacaa 534125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 13488300 - 13488567
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt-aatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| ||| || | ||| ||| ||||||  ||||||||    
T  13488300 tcattgatagtggattggagagatcaatctctccccgagattaggtcaagttggaccgaactgggtcaataatcttttg-tgtctttgttcctctcttct 13488398  T
Q  97 ctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    |||| | ||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||| | ||| |||||||  |||||| |||    
T  13488399 ctccctttcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgctattgattgtgttcactttgaaatt 13488498  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||||||| | ||||||||||| |  |||  |||||||| || ||||| |||||||||||||    
T  13488499 ggttattactttcctttactccacacatcatattttgtattggtgtgagatttgagtccgaattcacaa 13488567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 31183068 - 31183339
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||| ||||||||||||||  |||| || || ||| ||||||||||||||||||||||||| | ||||  ||||||| |||||||||||  ||||    
T  31183068 tcattgatactggattggagagatctatctctcccccatattaggtcaagttggaccgaactgggtcaacattctttggtgtgtttgtttctctcttctc 31183167  T
Q  98 tccttatcttttg-----cttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttga 192  Q
    || ||||||||||     ||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||| || |||||||||||  ||||||    
T  31183168 tctttatcttttgaattgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattatttttgttgcttgtgttccctttga 31183267  T
Q  193 tattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  31183268 tattagttactactttcctttgctccacacatcatggtttgtattggtgtga-ttttgagtccgaattcacaa 31183339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 28750726 - 28750457
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt-aatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||| ||||| ||| || | ||||||| ||||||  ||||||||    
T  28750726 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaattgggtcaataatct-ttggtgtgtttgttcctctcttct 28750628  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 194  Q
    ||||  |||| |||||||||||||||||  |||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||| |||| | |    
T  28750627 ctccctttatattttgcttgtggttttgtgcttttcacttggattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaa 28750528  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| |  |||  |||||||| |||||||| ||| |||||||||    
T  28750527 ttggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccaaattcacaa 28750457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 267
Target Start/End: Original strand, 32636924 - 32637192
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc 100  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||  || ||||    
T  32636924 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttccctcc 32637023  T
Q  101 --ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
      ||||||| |||||||| ||||||  |||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||  | ||| ||| |    
T  32637024 ctttatcttgtgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgtttagtgtgaaatttg 32637123  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaata 267  Q
    ||| ||||||||| | ||||||||||| | ||||  |||||||| ||||||||||||||||||||||||    
T  32637124 ttactactttcctttactccacacatcatagtttgtattggtgtgagttttgaatccgaattcacaata 32637192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13239848 - 13240078
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||| || |||||||||||||| | || || ||||||| |||||||||||  |||    
T  13239848 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatttttggtgtgtttgtttctctcttct 13239947  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 194  Q
    ||||||  ||||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||| |||| | |    
T  13239948 ctccttttatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttgttgttgcttgtgtttactttaaaa 13240047  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||| ||||||||| | |||||||||||    
T  13240048 ttggttactactttcctttactccacacatc 13240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 30682993 - 30682724
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | |||||||||||||||||||||||  ||  || | ||||||| ||||||  |||||||||    
T  30682993 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactggtcaacaatct-ttggtgtgtttgttcctctcttctc 30682895  T
Q  98 tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |||||  ||||||||||||||  ||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  ||||||||    
T  30682894 tccttttatcttttgcttgtgaatttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgata 30682795  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||| ||||||||    
T  30682794 ttggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgtattcacaa 30682724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 33831777 - 33832044
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||||||||||| |||||| ||||| || || ||| ||||||||||||||| ||||||||| | || |  ||||||| |||||||||||  ||||    
T  33831777 tcattgatagtggattgaagagatcaatctctcccccatattaggtcaagttggactgaactgggtcaacaatctttggtgtttttgtttctctcttctc 33831876  T
Q  98 tccttatcttttgcttgtggttttgaactttt-cactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    || ||||||||||||||||| ||||| ||||| |||||||||| ||| ||||||| |||||  || |||| ||||| |||||||||||  ||||||| ||    
T  33831877 tctttatcttttgcttgtggctttgagctttttcactttgattcctagattagatttaggtgctgctattgttgttattgcttgtgttcactttgatttt 33831976  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| ||||||||| ||||||||||||| | ||||  ||| |||||| |||||| |||||||||||||    
T  33831977 ggttactactttcctttgctccacacatcatagtttgtatttgtgtaa-ttttgagtccgaattcacaa 33832044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16452177 - 16452403
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctc-t 98  Q
    ||||| |||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  16452177 tcattcatagtggattggagagataaatctctcccccagagtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgtttatcttctctt 16452276  T
Q  99 cctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    ||||   | |||||||||||||||||| ||||||| ||||||| ||| ||||||||||   | |||| |||||||| |||||||||||| | || |||||    
T  16452277 cctttatttttttgcttgtggttttgagcttttcaatttgattcctagattagatcta---actgttgttattgttgttgcttgtgtttacgttaatatt 16452373  T
Q  197 ggttattactttcctctgctccacacatct 226  Q
    ||||| || |||||| | ||||||||||||    
T  16452374 ggttactattttcctttactccacacatct 16452403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37439238 - 37439467
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  37439238 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 37439337  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 194  Q
    ||||  ||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| |||||||||||||| |||||||||||| |||||| |    
T  37439338 ctccctttatcttatgcttgtggttttgtgcttttcattttgattactagattagacctaggtgttgttattattgttgttgcttgtgtttactttgaaa 37439437  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||| ||| ||| | |||||||||||||    
T  37439438 ttggttactac-ttcttttgctccacacatc 37439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 19806463 - 19806727
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc 100  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  |||| || ||||||  ||||||||||||    
T  19806463 ttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggggtgtttgttcctctcttctctcc 19806562  T
Q  101 --ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
      ||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||| |||||||||||| | |||| | ||||  |||| | |||||    
T  19806563 ctttatcttttgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattgctattgcctatgttcactttaaaattgg 19806662  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||| ||||||||| | ||||  |||||||  |||||||| |||||||||||||    
T  19806663 ttactactttcctttgccccacacatcatagtttgtattggtg--agttttgagtccgaattcacaa 19806727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 39468620 - 39468350
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||| ||||||| ||||| || || ||| ||||| || |||||| ||||||||| | || |  || |||| ||||||  |||||||||    
T  39468620 tcattgatagtggattagagagatcaatctctcccccatattaggttaaattggactgaactgggtcaacaatctttagtgtgtttgttcctctcttctc 39468521  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgata 194  Q
    |||  ||||||| |||| |||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||    
T  39468520 tccctttatcttgtgctcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgata 39468421  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | ||||  ||||||||||||||||| | |||||||||||    
T  39468420 ttggttactactttcctttgctccacacatcatagtttgtattggtgtaagttttgagttcgaattcacaa 39468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 265
Target Start/End: Complemental strand, 5887464 - 5887237
Alignment:
Q  41 taggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgctt--gtggttttgaacttttcactttg 136  Q
    ||||||||||||||||||| ||| | | || |  ||||||| |||||||||||  |||||| |||||||||||||  |||||||| |  |||||| ||||    
T  5887464 taggtcaagttggaccgaattggatcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttttgtggttttaagtttttcattttg 5887365  T
Q  137 attactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcat 236  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||| ||| | ||||  ||    
T  5887364 attactagattagatttaggtgttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacatatcatagtttgtat 5887265  T
Q  237 tggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| | |||||| |||||||||||||    
T  5887264 tggtgtga-ttttgagtccgaattcacaa 5887237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 16649856 - 16649676
Alignment:
Q  45 tcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaa 144  Q
    |||||||||||| |||| ||| | || | |||||||| |||||||||||| ||   ||||||||||||||||||||||  |||||||||||||||||||     
T  16649856 tcaagttggaccaaactaggtcaacaatccttggtgtgtttgtttctcttttccgtttatcttttgcttgtggttttgtgcttttcactttgattactag 16649757  T
Q  145 attagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 225  Q
    ||||||||||||| |||||||||||| |  | ||||||||  |||||||  |||||| ||||||||| |||||||||||||    
T  16649756 attagatctaggtgttgttattattgctactacttgtgttcactttgattgtggttactactttcctttgctccacacatc 16649676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 36074114 - 36073867
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||| | | || |  ||||||| |||||||||||  |||    
T  36074114 tcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaatctttggtgtgtttgtttctctcttct 36074015  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||| ||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  36074014 ctccttttatgttttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 36073916  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||||||||||||| ||||||||||||| | ||||  ||||||||    
T  36073915 attggttattactttcctttgctccacacatcatagtttgtattggtgt 36073867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13343157 - 13343387
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||| ||| |||||||||||||| | || |  ||| ||| |||||||||||  |||    
T  13343157 tcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttct 13343256  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||||||| |  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||  ||  ||||| |    
T  13343257 ctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgcattcactttgtt 13343355  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  13343356 attggttactactttcctttgctccacacatc 13343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 25412857 - 25413087
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||| ||||||||| | || |  ||||||| ||||||  ||||||||    
T  25412857 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtgtttgtttctctcttct 25412956  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  ||||||||||||||||| ||||  |||||| |||||||| ||| ||||||| |||||  ||||||| ||| || ||||||||| |  ||| |||    
T  25412957 ctccttttatcttttgcttgtgg-tttgtgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttgtgctcacttggat 25413055  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||| ||| || |||||| |||||||||||||    
T  25413056 attgattactaatttcctttgctccacacatc 25413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13695761 - 13695639
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| |||||||||| ||||||| | ||| || ||||||||||||||| ||||||| |||| ||||| ||||||||||||| |||||||||||||||||    
T  13695761 tcattaatagtggattagagagattattctctcctccatagtaggtcaacttggaccaaactaggtaaacatttcttggtgtgtttgtttctcttctctc 13695662  T
Q  100 cttatcttttgcttgtggttttg 122  Q
     ||||| ||||||||| ||||||    
T  13695661 tttatcctttgcttgttgttttg 13695639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 30182685 - 30182915
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| |||| |||||||| |||||||||||| | | || |  ||||||| |||||||||||  |||    
T  30182685 tcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatctttggtgtgtttgtttctctcttct 30182784  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  ||||| |||||||| |||||  |||||||||||| || ||| ||||||||||||| |||||||| ||| || ||| |||  ||  ||||| |    
T  30182785 ctccttttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgcattcactttgtt 30182883  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  30182884 attggttactactttcctttgctccacacatc 30182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9049413 - 9049210
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||| |||||||||||||||| ||| | || || | ||||||| ||||||||||||| ||| ||| ||||| ||||||| |||||||||||||        
T  9049413 tcattgacagtggattggagagatcaatatctcccccaaagtaggtgaagttggaccgaaatggataaacattttttggtgtgtttgtttctcttc---- 9049318  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
      |||||||||||||||||||||   ||||||| || ||| ||| ||||||| ||| | |||||||| ||||| || |||||| || |||||||||||||    
T  9049317 --tatcttttgcttgtggttttgtgtttttcac-ttaatttctatattagatttagat-ttgttattgttgttgtttcttgtggttactttgatattggt 9049222  T
Q  200 tattactttcct 211  Q
    || || ||||||    
T  9049221 tactattttcct 9049210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 3075726 - 3075627
Alignment:
Q  4 ttgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||| ||||||||||| ||||| || | ||||||||||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||    
T  3075726 ttgatagtgaattggagagatcaatctctccctcatagtaggtcaagttggaccaaattgggtgaacatttcttggtgtgtttgtttctcttctctcctt 3075627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28278413 - 28278504
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttct 91  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | || |||||||||| ||| |||||    
T  28278413 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacaattcttggtgtgtttctttct 28278504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 213562 - 213644
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||| | |||||||||||||    
T  213562 tcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacatttcttggtgt 213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5058142 - 5058223
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||||||||| | |||||||||||||    
T  5058142 tcattgatagtggattggagagatcaatctctcctctagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 5058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 26177979 - 26178215
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttc-ttggtgtatttgttt--ctctt 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || || ||||||| |||||||  |||||    
T  26177979 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctctt 26178078  T
Q  95 --ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctt 189  Q
      ||||||  ||||||| ||||||| |||||   ||||||||||||||| ||| ||||||||||||| ||||||| |||| || |||||||      |||    
T  26178079 ccctctccttttatcttgtgcttgt-gttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttgcacacactt 26178177  T
Q  190 tgatattggttattactttcctctgctccacacatctt 227  Q
    || || |||||| ||||||||| |||||||||||||||    
T  26178178 tgttagtggttactactttcctttgctccacacatctt 26178215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 3075629 - 3075551
Alignment:
Q  187 ctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||  |||||||| |||||| | |||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaa 3075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 16641008 - 16640930
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||||||| ||||| || |||| |||||||||||| || ||||||||||||| |||||||||||||    
T  16641008 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtagggccgaactgggtaaacatttcttggtgt 16640930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40147358 - 40147423
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||    
T  40147358 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggt 40147423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 16409572 - 16409806
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttc-ttggtgtatttgttt--ctctt 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || || ||||||| |||||||  |||||    
T  16409572 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctctt 16409671  T
Q  95 --ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctt 189  Q
      ||||||  ||||||| ||||||| |||||   |||||||||||| || ||| ||||||||||||| |||||||| ||| || |||||||      |||    
T  16409672 ccctctccttttatcttgtgcttgt-gttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactt 16409770  T
Q  190 tgatattggttattactttcctctgctccacacatc 225  Q
    || || |||||| ||||||||| |||||||||||||    
T  16409771 tgttagtggttactactttcctttgctccacacatc 16409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 42309931 - 42309827
Alignment:
Q  159 ttgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaa 258  Q
    ||||| |||||||| ||||||||| || || |||||| |||||| |||||||| |||| || |||||||||||||||||| ||| | |||||| ||| ||    
T  42309931 ttgttgttattgttgttgcttgtgattactatgatataggttatcactttcctttgctgcatacatctttgttttcattgatgtga-ttttgagtcctaa 42309833  T
Q  259 ttcaca 264  Q
    ||||||    
T  42309832 ttcaca 42309827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26170859 - 26171032
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttc-ttggtgtatttgttt--ctctt 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || || ||||||| |||||||  |||||    
T  26170859 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctctt 26170958  T
Q  95 --ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttat 165  Q
      ||||||  ||||||| ||||||| |||||   ||||||| ||||||| ||| ||||||||||||| |||||||    
T  26170959 ccctctccttttatcttgtgcttgt-gttttatgcttttcattttgattcctagattagatctaggtgttgttat 26171032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27015620 - 27015701
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||| | |||| ||||| || |||| | ||||||||||||||||||||||||| | ||||| |||||||    
T  27015620 tcattgatagtggattgtacagatcaatctctcctccaaaataggtcaagttggaccgaactgggtgaacattttttggtgt 27015701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 30897563 - 30897631
Alignment:
Q  53 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggtttt 121  Q
    |||||||| |||||| ||||||||||||| ||||||||| || ||||  ||||||||||||||| ||||    
T  30897563 gaccgaacagggtaaacatttcttggtgtgtttgtttctgttttctctctatcttttgcttgtgatttt 30897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9789295 - 9789229
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  9789295 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 9789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 30793282 - 30793340
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctt 107  Q
    ||||||||||||  ||||| ||||||||||||| ||||||||||| ||||| |||||||    
T  30793282 gttggaccgaacaaggtaaacatttcttggtgtgtttgtttctctactctctttatctt 30793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 15464395 - 15464345
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  15464395 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 15464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 10593358 - 10593446
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||| ||  || |||||||||||||||||    
T  10593358 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttt 10593446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18441719 - 18441653
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    |||||||||||||||||||||| | ||||| | ||| | ||||||||||| ||||||||||||||||    
T  18441719 tcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggt 18441653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 24135711 - 24135661
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||| ||||||||    
T  24135711 tgctccacacatctttattttcattggtgtgagtttt--atccggattcacaa 24135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 27637678 - 27637602
Alignment:
Q  7 atagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||| ||||| || | || |||||||||  ||||||||||||||||| |  ||||||||||||    
T  27637678 atagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaatatttcttggtgt 27637602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 35387526 - 35387490
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  35387526 tgctccacacatctttgtttacattggtgtgagtttt 35387490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 40147556 - 40147608
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  40147556 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 40147608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 5e-72; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41317505 - 41317240
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||| ||||||    
T  41317505 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcctctctc 41317406  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||||    
T  41317405 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggt 41317306  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||| ||||| | ||||  |||||||| || ||||| | |||||||||||    
T  41317305 tactactttcctttgctccaaacatcatagtttgtattggtgtgagatttgagttcgaattcacaa 41317240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 36146479 - 36146214
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||| ||||||| ||||| || || ||| ||||||||||||||||||||| ||| | || |  ||||||| |||||||||||||||||    
T  36146479 tcattgatagtggatttgagagatcaatctctcccccatattaggtcaagttggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctc 36146380  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||    
T  36146379 tttatcttttgcttgtggtttttagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattgg 36146280  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||||| | ||||  ||| |||||| |||||| |||||||||||||    
T  36146279 ttactactttcctttgctccacacatcatagtttgtatttgtgtaa-ttttgagtccgaattcacaa 36146214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 31105464 - 31105202
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||| ||||||||||||||||||||| || |||  ||||| ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  31105464 tcattgatggtggattggagagataaatctctccccaagagtagatcaagttggaccgaactgggtaaacatttcttggtctgtttgtttctcttctctc 31105365  T
Q  100 cttatc-ttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||| ||   |||| |||||||| |||||||||||| |||||||||||     
T  31105364 cttatctttttgcttgtggttttgagcttttcactttgattcctagattagatcttgg---tgttgttattgttgttgcttgtgtttactttgatattga 31105268  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| | ||||||||||| | ||||| |||||||| |||||||  | |||||||||||    
T  31105267 ttactactttcctttactccacacatcatagtttt-attggtgtgagttttgtgttcgaattcacaa 31105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 14069904 - 14069635
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || |||  | ||||||||||||||||||||||||| | || |  ||||||| |||||   |||||||||    
T  14069904 tcattgatagtggattggagagatcaatctctccccaagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctc 14069805  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| || |||||||||||| |||||| ||    
T  14069804 tccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaat 14069705  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | |||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  14069704 tagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 14069635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 14379932 - 14379663
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||   |||||||||    
T  14379932 tcattgatagtggattggagagatcaatctctcccctagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctc 14379833  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 195  Q
    |||  ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| || |||||||||||| |||||| ||    
T  14379832 tccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaat 14379733  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | |||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  14379732 tagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 14379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 5 - 265
Target Start/End: Complemental strand, 47676203 - 47675938
Alignment:
Q  5 tgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc- 100  Q
    |||||||||| ||||||||| ||||| || || ||| ||||||||||||||||||||||| | | || |  ||||||| ||||||  ||||||||||||     
T  47676203 tgatagtggaatggagagatcaatctctcccccatattaggtcaagttggaccgaactggatcaacaatctttggtgtgtttgttcctctcttctctcca 47676104  T
Q  101 -ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||||    
T  47676103 tttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggt 47676004  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||||||||| | ||||  |||||||| |||||||  |||||||||||||    
T  47676003 tactactttcctttgctccacacatcatagtttgtattggtgtgagttttgtgtccgaattcacaa 47675938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 47674014 - 47673749
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctct 98  Q
    |||||||||||||||||||||||| ||||| || ||||| || |||||||||||||||||||  | | || |  ||||||| ||||||  ||||||||||    
T  47674014 tcattgatagtggattggagagatcaatctctccccatattaagtcaagttggaccgaactgaatcaacaatctttggtgtgtttgttcctctcttctct 47673915  T
Q  99 cc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    ||  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||  ||||||||||    
T  47673914 ccctttatcttttgcttgtggttttgtacttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatatt 47673815  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattca 262  Q
    ||||| ||||||| | || |||||||||| | ||||  |||||||| |||||||  ||||||||||    
T  47673814 ggttactactttcttttgttccacacatcatagtttgtattggtgtgagttttgtgtccgaattca 47673749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 38671293 - 38671027
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    ||||||||||||||||| |||||||||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||  ||||    
T  38671293 tcattgatagtggattgaagagataaatctatcccccaaaataggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 38671194  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| |||| ||||||||  |||||||||||  ||||||| ||     
T  38671193 tccttatcttttgcttgtggttttgagcttttcactttgattactagatttgatctaggtgttgtcattattgtcgttgcttgtgttcactttgattttt 38671094  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| || |||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  38671093 gttactattttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 38671027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41649082 - 41648816
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||  ||||    
T  41649082 tcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 41648983  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  || |||| ||||| |||||||||||  ||||||||||     
T  41648982 tctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgtgttcactttgatatta 41648883  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  41648882 gttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 41648816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24525573 - 24525351
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggt-aatcatttcttggtgtatttgtttctcttctct 98  Q
    |||||||||||||||||||||||| ||||| || |||  | ||||||||||||||| ||||||||| ||| || | ||||||| ||||||||||||||||    
T  24525573 tcattgatagtggattggagagatcaatctctccccaagattaggtcaagttggacggaactgggtcaataatct-ttggtgtgtttgtttctcttctct 24525475  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattg 197  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  24525474 ctttatcttttgcttgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattgttgttgcttgttgtttgctttgatattg 24525375  T
Q  198 gttattactttcctctgctccaca 221  Q
     ||| |||||| || |||| ||||    
T  24525374 attactacttttctttgctacaca 24525351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 8153439 - 8153664
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||| ||||||||| | || |  ||||||| ||| |||||||||||||    
T  8153439 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggactgaactgggtcaacaatctttggtgtgtttatttctcttctctc 8153538  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| |||||||||||||||| || || |||||||||| |||||||||||||| ||||||||| |  ||||||||||| |    
T  8153539 tttatcttttgcttgtggttttgagcttttcactttgattattagatcagatctaggtgttgttattattgttgttgcttgtgctcactttgatattgat 8153638  T
Q  200 tattactttcctctgctccacacatc 225  Q
    || ||||||||| |||||||| ||||    
T  8153639 tactactttcctttgctccacgcatc 8153664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 496054 - 495833
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || ||||||||||||||||||| |||| |||| | || |  ||||||| ||||||||| |||||||    
T  496054 tcattgatagtggattggagagatcaatctctcccctatagtaggtcaagttggacagaaccgggtcaacaatctttggtgtgtttgtttcttttctctc 495955  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||| ||||||||| ||||  | |||||||||||||| ||| ||||||||||||| |||||||| ||||| ||| |||||||| |||||||||||||    
T  495954 tttatctcttgcttgtgattttctatttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattggt 495855  T
Q  200 tattactttcctctgctccaca 221  Q
    || ||||||||| |||||||||    
T  495854 tactactttcctttgctccaca 495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 23555137 - 23555408
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||| ||| |||||||||||  |||    
T  23555137 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttct 23555236  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||| |||   |||| ||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  |||||||    
T  23555237 ctccttttatcttttgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgat 23555336  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  23555337 attggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 23555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 19502275 - 19502545
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| |||| |||||||| ||| |||| ||||| | || |  ||||||| |||||||||||  |||    
T  19502275 tcattgatagtggattggagagatcaatctctcctccagagtaagtcaagtttggaacgaagtgggtgaacaatctttggtgtgtttgtttctctcttct 19502374  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 194  Q
    ||||  |||| || |||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||| |||||| |    
T  19502375 ctccctttattttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtatttactttgaaa 19502474  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | ||||  ||| |||| |||||||| || ||||||||||    
T  19502475 ttggttactactttcctttgctccacacatcatagtttgtattagtgtgagttttgagtctgaattcacaa 19502545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 23565132 - 23564903
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||     
T  23565132 tcattgatagtggattggagagatcaatctctctcctagagtaggtcaagttggactgaactgg-taatcatttcttggtgtgtttgtttctcttctcta 23565034  T
Q  100 cttatcttttgcttgtgg-ttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
     ||||||||||||||||| |||||   |||||||||||||| ||| ||||||||||||| |||   |||||||| ||||||||| || ||||||||||||    
T  23565033 tttatcttttgcttgtggtttttgtgattttcactttgatttctagattagatctaggttttg---ttattgttgttgcttgtggttactttgatattgg 23564937  T
Q  199 ttattactttcctctgctccacacatctttgttt 232  Q
    | | |||||| ||   |||||||||||| |||||    
T  23564936 tcactacttttcttcactccacacatctatgttt 23564903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 1113754 - 1114019
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||| |||||||||||| ||||| || || ||| ||||||||||| ||||||| || || | || |  ||||||| ||||||||||||||| |    
T  1113754 tcattgatagtagattggagagatcaatctctcccccatattaggtcaagtttgaccgaattgagtcaacaatctttggtgtgtttgtttctcttctccc 1113853  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||   |||||| ||||||| ||| ||||||||||||| || ||||| ||||| |||||||||||| |||||||||| ||    
T  1113854 tttatcttttgcttgtggttttgtgtttttcattttgattcctagattagatctaggtgttattattgttgttattgcttgtgtttactttgatattagt 1113953  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||  |||||||| ||||||||||||| | ||||  |||| ||| |||||||| || ||||||||||    
T  1113954 taccactttcctttgctccacacatcatagtttgtattgatgtgagttttgattcggaattcacaa 1114019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 26417416 - 26417683
Alignment:
Q  4 ttgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatca-tttcttggtgtatttgtt--tctcttctctcc 100  Q
    ||||||||||||||||||||| ||||| || |||   |||||||| ||||||| |||||||| | || ||||||||||| ||||||  ||||||||||||    
T  26417416 ttgatagtggattggagagatcaatctctccccaggttaggtcaaattggaccaaactgggtcaacaatttcttggtgtgtttgttcctctcttctctcc 26417515  T
Q  101 --ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattg 197  Q
      ||||||||||||||||||||||| |||||||||||||||  || |||| ||||||||  ||||||| ||| || ||||||||| || |||||||||||    
T  26417516 ctttatcttttgcttgtggttttgagcttttcactttgattcatagattatatctaggtgctgttattgttgattattgcttgtggttactttgatattg 26417615  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| | ||||||| ||| | ||||  |||||||| |||||||| |||||||||||||    
T  26417616 gttactactttcctttactccacatatcatagtttgtattggtgtgagttttgagtccgaattcacaa 26417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 263
Target Start/End: Original strand, 43864343 - 43864609
Alignment:
Q  3 attgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctc 99  Q
    |||||||||||||||||||||| ||||| ||||| | | ||||||||||||||||||||||||| | || |   |||||| ||||||  |||||||||||    
T  43864343 attgatagtggattggagagatcaatctctctcccagattaggtcaagttggaccgaactgggtcaacaatagatggtgtgtttgttcctctcttctctc 43864442  T
Q  100 c--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatatt 196  Q
    |  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||||    
T  43864443 cctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatatt 43864542  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 263  Q
    | |||  |||||||| | ||||||||||| | ||||  |||||||| |||||||| |||||||||||    
T  43864543 gattaccactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 31518999 - 31519256
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc--atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    ||||||| |||||||||||||||| ||||| |||||  | ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |    
T  31518999 tcattgacagtggattggagagatcaatctctctccccagagtaggtcaagttggaccgaactggataaacatttcttggtgtgtttgtttctcttcttt 31519098  T
Q  99 ccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 198  Q
    | ||||||||||||||||        ||||||||||||||| ||| ||||||||||||| ||||||||||||||  ||||| || || | ||||||||      
T  31519099 ctttatcttttgcttgtg--------cttttcactttgattcctagattagatctaggtgttgttattattgttgctgcttatgattacattgatattaa 31519190  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| || |||  | ||||||||||||| || |||||||||| || |||||||| ||| |||||||||    
T  31519191 ttactatttttatttgctccacacatc-ttattttcattggcgtgagttttgagtccaaattcacaa 31519256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 4586258 - 4586528
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || ||| || ||||| ||||||||||||||||   || |  || |||| ||||||  |||||||||    
T  4586258 tcattgatagtggattggagagatcaatctctcccccatattatgtcaacttggaccgaactgggtcgacaatctttcgtgtgtttgttcctctcttctc 4586357  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt-attgtttttgcttgtgtttgctttgata 194  Q
    |||  |||||||||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||  || || |||||||||||  |||||| |    
T  4586358 tccctttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattgtttattattgcttgtgttcactttgaaa 4586457  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||  |||||||| ||||||||||||| | |||| ||||||||| || ||||| |||||||||||||    
T  4586458 ttggttaccactttcctttgctccacacatcatagtttacattggtgtgagatttgagtccgaattcacaa 4586528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 48489528 - 48489797
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||| |||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||||| || |  ||||||| ||||||  |||||||||    
T  48489528 tcattcatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtaaacaatctttggtgtgtttgttcctctcttctc 48489627  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
     ||  ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||  ||||  ||||||||    
T  48489628 gccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgctcatgttcactttgata 48489727  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||||||||||| | |||   |||||||| | |||||| |||||||||||||    
T  48489728 ttggttactactttcctttgctccacacatcatagttggtattggtgtga-ttttgagtccgaattcacaa 48489797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 31733040 - 31732770
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||| |||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||  ||||||  |||||||||    
T  31733040 tcattgatactggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaacaatctttggtgagtttgttcctctcttctc 31732941  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    |||||||| ||| || |||||||||||  |||||| |    
T  31732940 tccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaaaggttgttattgttgattattgcttgtgttcactttgaaa 31732841  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||| | ||||||||||||| | ||||  | |||||| |||||||| |||||||||||||    
T  31732840 ttggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttgagtccgaattcacaa 31732770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4253599 - 4253375
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||| |||||| ||||||| ||||| || | || |||||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||| |||    
T  4253599 tcattgataatggattagagagatcaatctctcccacagagtaggtcaatttggaccgaactaggtaaacatttcttggtgtgtttgtttctcttcactc 4253500  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||| |||||||||| ||||| ||||||| | |||||| ||| ||||||||||||| || ||||||||||| |||| || | || |||||||||||||    
T  4253499 tttatcgtttgcttgtgcttttgtacttttcgc-ttgatttctatattagatctaggt-tttttattattgttgttgcctgaggttactttgatattggt 4253402  T
Q  200 tattactttcctctgctccacacatct 226  Q
    || ||||||| | |||| |||||||||    
T  4253401 taatactttcttttgctacacacatct 4253375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 18126741 - 18127013
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct----tc 95  Q
    ||||||||||||||||||||  || ||||| || || | | ||||||||||| |||||| |||||| | || |  ||||||| |||||| ||||    ||    
T  18126741 tcattgatagtggattggaggaatcaatctctcccccagactaggtcaagtttgaccgacctgggtcaacaatctttggtgtgtttgttcctctattttc 18126840  T
Q  96 tctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttga 192  Q
    |||||  ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  ||||||    
T  18126841 tctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttgtgttcactttga 18126940  T
Q  193 tattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| ||| ||||||||| | ||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  18126941 tattgattactactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 18127013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 23344072 - 23344292
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    ||||||||| | ||||||||| || ||||| || ||| ||||||||||||||||||||||  ||||| ||||||||||||| | |||||||||||||||     
T  23344072 tcattgataatagattggagaaattaatctctc-ccagagtaggtcaagttggaccgaacaaggtaaacatttcttggtgtgtatgtttctcttctctct 23344170  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    |||||| || |||| |||||||   ||||||||||||||  || |||| |||||||| |||   |||||||| ||||||||| || ||| ||||||||||    
T  23344171 ttatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatctaggttttg---ttattgttgttgcttgtggttacttggatattggtt 23344267  T
Q  201 attactttcctctgctccacacatc 225  Q
    | ||||||||| |||||||||||||    
T  23344268 actactttcctttgctccacacatc 23344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25615950 - 25616199
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtttc-----tct 93  Q
    |||||||||||||||| ||||||| ||||| | ||||| ||||||||||| |||||||||||||||  | || |  ||||||| ||||||||     |||    
T  25615950 tcattgatagtggattagagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggcgaacaatctttggtgtgtttgtttctctcttct 25616049  T
Q  94 tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttga 192  Q
    |||||| ||||||| ||||||||||||||  |||||||||| |||| ||| ||||||||||||| |||||||| ||| || |||||||||||  ||||||    
T  25616050 tctctctttatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttga 25616149  T
Q  193 tattggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||||||| ||||||||| ||||||| ||||| | ||||  ||||||||    
T  25616150 tattggttactactttcctttgctccatacatcatagtttgtattggtgt 25616199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 29991150 - 29991397
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  29991150 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 29991249  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||||||| |||||||| ||| || || |||||| |  |||||||    
T  29991250 ctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctatattagatctaggtgttgttattgttgattattacttgtgctcactttgat 29991348  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| |||||| || ||||||||||||| | ||||  ||||||||    
T  29991349 attggttactacttttctttgctccacacatcatagtttgtattggtgt 29991397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 36574586 - 36574363
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    ||||||||||||| |||||||||| ||||  || | | |||||||||| ||||||| |||||||||| ||||||||| ||| ||||||| |||||||||     
T  36574586 tcattgatagtggtttggagagatcaatccatccctagagtaggtcaatttggaccaaactgggtaaacatttcttgatgtgtttgtttttcttctctct 36574487  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    ||||||||| ||||||||||||   ||||||| |||||| ||| |||||||||| || |||||||| ||||| | || || | || ||||||||||||||    
T  36574486 ttatctttttcttgtggttttgtgtttttcac-ttgattcctagattagatctaagt-ttgttattgttgttgtggcctgagattactttgatattggtt 36574389  T
Q  201 attactttcctctgctccacacatct 226  Q
    | || |||||| || |||||||||||    
T  36574388 aatattttcctttgatccacacatct 36574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 48491676 - 48491942
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||| || |||| ||||| || |  ||| ||| |||||| ||||||||||    
T  48491676 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg-ccaaacttggtaaacaatctttgatgtgtttgttcctcttctctc 48491774  T
Q  100 c--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatatt 196  Q
    |  ||||||||||||||||||||||  ||||||| ||||||| ||| ||||||||||||  |||||||| ||| || |||||||||||  ||||||||||    
T  48491775 cctttatcttttgcttgtggttttgtgcttttcattttgattcctatattagatctaggcgttgttattgttgattattgcttgtgttcactttgatatt 48491874  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| ||||||||| | |||| |||||  | |||   |||||||| | ||||||||||||||||||||    
T  48491875 ggttactactttcctttactccgcacattatagttggtattggtgtga-ttttgaatccgaattcacaa 48491942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27347914 - 27348144
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||||||||||| |||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||  |||||||||    
T  27347914 tcattgatagtggattgcagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctc 27348013  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    ||   ||||||||||||||||||||||   |||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| |||||||  ||||||||    
T  27348014 tcactttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgata 27348113  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||  ||||||||| |||||||||||||    
T  27348114 ttggttgctactttcctttgctccacacatc 27348144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 12097931 - 12097789
Alignment:
Q  8 tagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatct 106  Q
    ||||||||||||||||| ||||| || || | | ||||||||||||||||||||| ||| | || |  ||||||| ||||||||||||||||| ||||||    
T  12097931 tagtggattggagagatgaatctctcccccagattaggtcaagttggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatct 12097832  T
Q  107 tttgcttgtggttttgaacttttcactttgattactaaattag 149  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  12097831 tttgcttgtggttttgagcttttcactttgattactagattag 12097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35854011 - 35854243
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatt-tcttggtgtatttgtttctct--tc 95  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || | ||||||||| |||||||||||  ||    
T  35854011 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtgtttgtttctctcttc 35854110  T
Q  96 tctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttg 191  Q
    |||||   ||||||| |||||||| ||||   |||||||||||| || ||| |||||||||||||  ||||||| ||| || ||| |||||||  |||||    
T  35854111 tctcccttttatcttgtgcttgtg-ttttatgcttttcactttgcttcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttg 35854209  T
Q  192 atattggttattactttcctctgctccacacatc 225  Q
    |||||||||| ||||||||| |||||||||||||    
T  35854210 atattggttactactttcctttgctccacacatc 35854243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 30024714 - 30024612
Alignment:
Q  109 tgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattacttt 208  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||| ||||||    
T  30024714 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactacttt 30024615  T
Q  209 cct 211  Q
    |||    
T  30024614 cct 30024612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32358125 - 32358044
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  32358125 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 32358044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48408901 - 48409134
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg-gaccgaactgggtaatca-tttcttggtgtatttgtttctct--tc 95  Q
    |||||||||||||||||||||| | ||||| || |||| |||| ||||||||  ||||||||||||| | || ||||||||||| |||||||||||  ||    
T  48408901 tcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgtgtttgtttctctcttc 48409000  T
Q  96 tctcc---ttatctttt-gcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgcttt 190  Q
    |||||   ||||||||| ||||||| ||| |  ||||||||||||||  ||| |||||||||||||  ||||||| ||| || |||||||   |  ||||    
T  48409001 tctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcacttt 48409099  T
Q  191 gatattggttattactttcctctgctccacacatc 225  Q
    | ||||||||| ||||||||| |||||||||||||    
T  48409100 gttattggttactactttcctttgctccacacatc 48409134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 22270072 - 22270158
Alignment:
Q  3 attgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt 88  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | ||| ||||||||| ||||||    
T  22270072 attgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatctcttggtgtgtttgtt 22270158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25767031 - 25766798
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgtttctc--ttc 95  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| || ||||||||||||| ||  || ||||||||| ||||||||||  |||    
T  25767031 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgtgtttgtttctctattc 25766932  T
Q  96 tctcc---ttatc-ttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgcttt 190  Q
    |||||   ||||| |||||||||| | ||||   |||||||||||||  ||| |||||||||||||  ||||||| ||| || ||||||| | |  ||||    
T  25766931 tctcccttttatctttttgcttgt-gatttgtgtttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcgctcacttt 25766833  T
Q  191 gatattggttattactttcctctgctccacacatc 225  Q
    | ||||||||| |||||| || |||||||||||||    
T  25766832 gttattggttactacttttctttgctccacacatc 25766798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 39731466 - 39731638
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctctt-- 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||  |||||      
T  39731466 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttcc 39731565  T
Q  95 ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||||||| ||||||||    
T  39731566 ctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttatt 39731638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 40808734 - 40808910
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 148  Q
    |||||||||||||| ||||  |||| ||||||| ||||||||| |||||||  |||||||||||||||||||||   ||| ||| |||  | ||| ||||    
T  40808734 gttggaccgaactgagtaaatattttttggtgtgtttgtttcttttctctctatatcttttgcttgtggttttgtgttttacac-ttgggtcctagatta 40808832  T
Q  149 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcc-tctgctccacacatct 226  Q
     | ||||||  ||||||||||||| ||||||| |  | |||||||||| |||| |||||||| | ||||||||||||||    
T  40808833 aacctaggt-ctgttattattgttgttgcttgagaatactttgatatttgttactactttccttttgctccacacatct 40808910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4508777 - 4508696
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||| |||||||||||||||| ||||| |||| || ||||||| ||||||||||||||||||| | |||||||||||||    
T  4508777 tcattgagagtggattggagagatcaatctcttcttcagagtaggttaagttggaccgaactgggtgaacatttcttggtgt 4508696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 3259093 - 3259173
Alignment:
Q  2 cattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||||||||| ||||| || |||| |||||||||||||| |||||||||||| | |||||| ||||||    
T  3259093 cattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgaaccgaactgggtgaacatttcctggtgt 3259173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2759268 - 2759127
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    ||||||||||||||||||||| || ||||| ||| ||| | ||||||||||||||||||||| ||| | || |  ||||||| ||| ||  |||||||||    
T  2759268 tcattgatagtggattggagatatcaatctcttccccagattaggtcaagttggaccgaacttggtcaacaatcattggtgtgtttctttctctcttctc 2759169  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttga 137  Q
    |||  ||||||||||||| ||||||||  ||||| |||||||    
T  2759168 tccctttatcttttgcttatggttttgtgcttttaactttga 2759127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 4178946 - 4179117
Alignment:
Q  75 ttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg 170  Q
    ||||||| |||||||||||  |||||||||  || ||||||||||||||| |   |||||||||||||| ||| |||||||||||||  ||||||| |||    
T  4178946 ttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttg 4179044  T
Q  171 ttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
     || ||||||   ||  ||||| ||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  4179045 attattgcttacattcactttgttattggttactactttcctttgctccacacatcatagtttgtattggtgt 4179117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8359387 - 8359305
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||||||||| | |||||||||||||    
T  8359387 tcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 8359305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30814533 - 30814598
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || || ||| |||||||||||||||||||||||||    
T  30814533 tcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggt 30814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48599405 - 48599328
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttg 77  Q
    |||||||||||||||||||||||| ||||| | ||||| || || ||||||||||||||||||||| | |||||||||    
T  48599405 tcattgatagtggattggagagatcaatctctcctccagagcagatcaagttggaccgaactgggtgaacatttcttg 48599328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 26639425 - 26639544
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcct 101  Q
    |||||| |||||| ||||||| ||||| || ||||||||| ||||  |||| |||||||||| |||  | |||||||||  |||||||||||| |||| |    
T  26639425 ttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaaaaattcttggtgcgtttgtttctcttatctctt 26639524  T
Q  102 tatcttttgcttgtggtttt 121  Q
    || |||||||||||||||||    
T  26639525 taccttttgcttgtggtttt 26639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6360023 - 6359941
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggt-aatcatttcttggtgt 81  Q
    ||||||||||| |||||||||||| ||||| ||| ||||| |||||||||||||| |||||||||| ||  ||||||||||||    
T  6360023 tcattgatagttgattggagagatcaatctcttccccatattaggtcaagttggatcgaactgggtcaacaatttcttggtgt 6359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 6432071 - 6432133
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt 65  Q
    ||||||||||||||||||||| ||||| || | || |||||||||||||||||||||||||||    
T  6432071 ttgatagtggattggagagatcaatctctccttcagagtaggtcaagttggaccgaactgggt 6432133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34310787 - 34310721
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||||||||||    
T  34310787 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggt 34310721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 43504225 - 43504063
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt--ctctt- 94  Q
    |||||||||||| ||||||||| | ||||| || |||||||||||||||| ||||| |||||||||| ||  || ||||||||| |||||||  |||||     
T  43504225 tcattgatagtgaattggagagttcaatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttc 43504126  T
Q  95 -ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 155  Q
     ||||||  ||||||| ||||||| |||||   ||||||||||||||| ||| |||||||||||    
T  43504125 cctctccttttatcttgtgcttgt-gttttatgcttttcactttgattcctagattagatctag 43504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 5513705 - 5513640
Alignment:
Q  33 ctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||  || ||||||||||||||||    
T  5513705 ctccagagtaggtcaatttggactgaactgggtaaacatttcttgacgtgtttgtttctcttctct 5513640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29608834 - 29608915
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||||||| || ||||  || |||| |||||||||||||||||||||||| || |  ||||||||||||    
T  29608834 tcattgatagtggattggagatatcaatcactcctccagagtaggtcaagttggaccgaactgagtgaatatttcttggtgt 29608915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 1560734 - 1560646
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatc-atttcttggtgtatttgttt 89  Q
    |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||||| | || |||||||||||||||||    
T  1560734 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgtatttgttt 1560646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 2390385 - 2390461
Alignment:
Q  7 atagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt-aatcatttcttggtgt 81  Q
    |||||||||||||||||| ||||| || |||| ||||||||||||||||||||||| ||| ||| || |||||||||    
T  2390385 atagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactaggtgaataatctcttggtgt 2390461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 12097084 - 12097020
Alignment:
Q  147 tagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcct 211  Q
    ||||||||||| ||||| |||||||| ||| |||||||  ||||||||||||||| |||||||||    
T  12097084 tagatctaggtgttgttgttattgttgttgattgtgttcactttgatattggttactactttcct 12097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 20343997 - 20344059
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||   ||||| || |||| |||||||||||||||||||||||||||    
T  20343997 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagttggaccgaactgggt 20344059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4510619 - 4510538
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||| ||| || ||||| || |  | ||||||||||||||||||| ||||||| | |||||||||||||    
T  4510619 tcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaagttggaccgtactgggtgaacatttcttggtgt 4510538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4512461 - 4512380
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||| ||| || ||||| || |  | ||||||||||||||||||| ||||||| | |||||||||||||    
T  4512461 tcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaagttggaccgtactgggtgaacatttcttggtgt 4512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 18408628 - 18408578
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  18408628 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 18408578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 1533678 - 1533714
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1533678 tgctccacacatctttgttttcattggtgtgagtttt 1533714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 30024800 - 30024740
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgg 63  Q
    ||||||||||||||||||||| ||||  || || | |||||||||||||||||||||||||    
T  30024800 ttgatagtggattggagagatcaatcactcccccagagtaggtcaagttggaccgaactgg 30024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 3904477 - 3904418
Alignment:
Q  61 tgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttt 120  Q
    ||||||| ||||||||||| | |||||||||||| | || |||||||||| |||||||||    
T  3904477 tgggtaaacatttcttggtatgtttgtttctcttatatctttatcttttggttgtggttt 3904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 20357785 - 20357820
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttt 248  Q
    |||||||||||||||||||||||||||||| |||||    
T  20357785 tgctccacacatctttgttttcattggtgtgagttt 20357820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 3047114 - 3047085
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  3047114 tgctccacacatctttgttttcattggtgt 3047085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18396415 - 18396488
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaa-gttggaccgaactgggtaatcatt 72  Q
    |||||||||| ||||||||||||| ||||| | ||| | |||||||||| | ||||||||||||||||| ||||    
T  18396415 tcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaacatt 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 18413505 - 18413455
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| ||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  18413505 tgctcctcacatctttgtttacattggtgtgagtttt--atccgaattcacaa 18413455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 6430442 - 6430494
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  6430442 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 6430494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 21645870 - 21645834
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  21645870 tgctccacacatctttgtttacattggtgtgagtttt 21645834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 34139841 - 34139570
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||  ||||    
T  34139841 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 34139742  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||    
T  34139741 tctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtcttgttattattgttgttgcttgtgttcactttgatattg 34139642  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 270  Q
    |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||||||||||| ||||    
T  34139641 gttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaaat 34139570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 723815 - 723549
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||||||||  ||||    
T  723815 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 723716  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||  |||||||||||    
T  723715 tctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgattgtgttcactttgatattg 723616  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  723615 gttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 723549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 33162521 - 33162256
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||| ||||||| ||||| || || | | ||||||||||||||||||||| ||| | || |  ||||||| ||||||||||||||||     
T  33162521 tcattgatagtggattagagagatcaatctctcccctagattaggtcaagttggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctcta 33162422  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg-tgtttgctttgatattgg 198  Q
     ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  33162421 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattgg 33162322  T
Q  199 ttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||| ||||||||| ||||||||||||| | ||||  |||| ||| | |||||| |||||||||||||    
T  33162321 ttactactttcctttgctccacacatcatagtttgtattgatgtga-ttttgagtccgaattcacaa 33162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 39284933 - 39285200
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatca---tttcttggtgtatttgtttctcttct 96  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | ||   |||  |||||| ||||||||||||||    
T  39284933 tcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttaatggtgtgtttgtttctcttct 39285032  T
Q  97 ctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||    
T  39285033 ctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaatt 39285132  T
Q  197 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||| |||||| || ||||||||||||| | ||| | |||||| | |||||| | |||||||||||||    
T  39285133 ggttactacttttctttgctccacacatcatagttgt-attggtatgagttttaagtccgaattcacaa 39285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 11067402 - 11067627
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| ||| ||||||| |||||| ||||| || || | | ||||||||||||||||||||| ||| | || |  ||||||| |||||||||||||||||    
T  11067402 tcatttataatggattgaagagatcaatctctcccccagattaggtcaagttggaccgaactcggtcaacaatctttggtgtgtttgtttctcttctctc 11067501  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||||    
T  11067502 tttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggt 11067601  T
Q  200 tattactttcctctgctccacacatc 225  Q
    || ||||||||| |||||||||||||    
T  11067602 tactactttcctttgctccacacatc 11067627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 36318080 - 36317815
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || |  | ||||||||||||||||||||||||||| | || |  ||||||| ||||||| |||||| ||    
T  36318080 tcattgatagtggattggagagatcaatctctcccttagagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttatcttctttc 36317981  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     ||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||| |||||||||||| | |||||||||||| |||||| ||||||    
T  36317980 tttatcttttgcttgtggttttgtgcttttcactttgattactagattaaatctaggtgttgttattattgctgttgcttgtgtttactttgaaattggt 36317881  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||| | || || ||||||| ||||||  |||||||| |||||||| ||| |||||||||    
T  36317880 tactactttcatttgttctacacatcattgtttgtattggtgtgagttttgagtccaaattcacaa 36317815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 6 - 265
Target Start/End: Complemental strand, 11151657 - 11151397
Alignment:
Q  6 gatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttat 104  Q
    ||||||||||||||||||| || || || || | | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||||||||| ||||    
T  11151657 gatagtggattggagagatcaacctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttat 11151558  T
Q  105 cttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatta 204  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||| |||||||||||  ||||||||||| ||| ||    
T  11151557 cttttgtttgtggttttgagcttttcactttgattactagattagatctagctgttgttattattgttgttgcttgtgttcactttgatattgattacta 11151458  T
Q  205 ctttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||  | ||||||||||||| | ||||  |||||| | |||||||| | |||||||||||    
T  11151457 cttttatttgctccacacatcatagtttgtattggtatgagttttgagttcgaattcacaa 11151397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 36773662 - 36773924
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 102  Q
    ||||||||||||||||||||| ||||| || || | | || |||||||||||||||||||||| | || |  ||||||| |||||||||||||| || ||    
T  36773662 ttgatagtggattggagagatcaatctctcccccagattatgtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctttcttt 36773761  T
Q  103 atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgctt-gtgtttgctttgatattggtta 201  Q
    ||||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||| |||||||||||||| ||||||  |||| ||||||||||||||||    
T  36773762 atcttttgcttgtggttttgagcttttcttttttattactagattagatctaggtgttgttattattgttgttgcttcttgttggctttgatattggtta 36773861  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||| | ||||||||||||| | ||||  |||||||| | ||||||||||||||||||||    
T  36773862 ctactttcatttgctccacacatcatagtttgtattggtgtga-ttttgaatccgaattcacaa 36773924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14633896 - 14633652
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||| ||||||||||||||||||| ||||| || || | | |||||||||||||||||||||| || | || |  ||||||| |||||||||||  ||||    
T  14633896 tcatagatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgagtcaacaatctttggtgtgtttgtttctctattctc 14633797  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||    
T  14633796 tctttatcttttgattgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattg 14633697  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||| ||||||||| |||| |||||||| | ||||  ||||||||    
T  14633696 gttactactttcctttgcttcacacatcatagtttgtattggtgt 14633652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 2334489 - 2334220
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||  | || |  ||||||| |||||||||||  |||    
T  2334489 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggggaacaatctttggtgtgtttgtttctctcttct 2334390  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 194  Q
    ||||  ||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||||| |||||| |    
T  2334389 ctccctttatcttgtgcttgtggttttgaagttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaa 2334290  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| |||| |||||||| | ||||  |||||||| | |||||| || ||||||||||    
T  2334289 ttggttactactttcctttgcttcacacatcatagtttgtattggtgtga-ttttgagtctgaattcacaa 2334220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 36988147 - 36987877
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  36988147 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 36988048  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  ||||||||||||||| ||||  ||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||| ||||||     
T  36988047 ctccttttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgtttactttgaa 36987948  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  36987947 attggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 36987877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 42362449 - 42362711
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctc--ttctc 97  Q
    ||||||||||||||||||||||||  |||| || || | | ||||||||||||||||    ||||| | || |  ||||||| ||||||||||  |||||    
T  42362449 tcattgatagtggattggagagatctatctctcccccagattaggtcaagttggacc----tgggtcaacaatctttggtgtgtttgtttctctcttctc 42362544  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||  ||||||| |||    
T  42362545 tctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgagttcactttgattttg 42362644  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  42362645 gttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 42362711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 11049651 - 11049888
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||| ||||| | |||| ||||| || | |||| |||||||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  11049651 tcattgatagtagattgaaaagatcaatctctccttcataataggtcaaattggactgaactgggtaaacatttctttgtgtgtttgtttctcttctctc 11049750  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||    ||||||||||| |||||| || || |||||||||||||    
T  11049751 tttatattttgcttgtggttttgtacttttcactttgattcctagattagatctaggt----ttattattgttgttgcttatgattactttgatattggt 11049846  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    || ||||||| | |||||||| |||| | ||||| ||||||||    
T  11049847 tactactttcttttgctccacgcatcatagtttt-attggtgt 11049888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 38312337 - 38312600
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | || |||||||||||||||||||||| | || |  ||| ||| ||||||  |||||||||    
T  38312337 tcattgatagtggattggagagatcaatctctcccccagattatgtcaagttggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctc 38312436  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||    
T  38312437 tccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttgtgttcactttgata 38312536  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaat 259  Q
    ||||||| ||||||||| ||||||||||||| ||||||  |||||||| | |||||| |||||||    
T  38312537 ttggttactactttcctttgctccacacatcattgtttatattggtgtga-ttttgagtccgaat 38312600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 29867969 - 29868235
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggt-aatcatttcttggtgtatttgtt--tctcttctctc 99  Q
    ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| ||| || | ||| ||| ||||||  |||||||||||    
T  29867969 ttgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccgaactgggtcaataatct-ttgatgtgtttgtttctctcttctctc 29868067  T
Q  100 c--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    |  ||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||| | ||||    
T  29868068 cgtttatcttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaattg 29868167  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     ||| |||||| || ||||||||||||| | ||||  |||| ||| |  ||||| |||||||||||||    
T  29868168 attactacttttctttgctccacacatcatagtttgtattgctgtgaaatttgagtccgaattcacaa 29868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 17057440 - 17057171
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||| ||||  ||||    
T  17057440 tcattgatagtggattggagagatcaatctctcccccagactaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcgtctc 17057341  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||| ||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||    
T  17057340 tccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgata 17057241  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||| ||||||| |  |||  |||||||| | |||||| |||||||||||||    
T  17057240 ttggttactactttcctttgctctacacatcatattttgtattggtgtga-ttttgagtccgaattcacaa 17057171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 17085423 - 17085154
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctc 97  Q
    |||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  ||||||| |||||| ||||  ||||    
T  17085423 tcattgatagtggattggagagatcaatctctcccccagactaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcgtctc 17085324  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  ||||||||||||||||||||||  ||||||||||| ||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||    
T  17085323 tccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgata 17085224  T
Q  195 ttggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||| ||||||||| ||||| ||||||| |  |||  |||||||| | |||||| |||||||||||||    
T  17085223 ttggttactactttcctttgctctacacatcatattttgtattggtgtga-ttttgagtccgaattcacaa 17085154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 265
Target Start/End: Original strand, 24885770 - 24885951
Alignment:
Q  83 tttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtg 182  Q
    ||||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||| |||||| || ||||||    
T  24885770 tttgtttctcttctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattgttgtttcttgtg 24885869  T
Q  183 tttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||  ||||||||||||||| || |||||| |||| |||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  24885870 ttcactttgatattggttactattttcctttgctacacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 24885951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 6595074 - 6594806
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctc 99  Q
    ||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||| || | || |  ||||||| |||||||||||  ||||||    
T  6595074 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctttggtgtgtttgtttctctcttctctc 6594975  T
Q  100 c---ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgatat 195  Q
    |   ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || || ||||||||  |||||||||    
T  6594974 ccttttatcttttgcttgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattacttgtgttcactttgatat 6594875  T
Q  196 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||| |||||| || ||||||||||||| | ||||  |||||||| | |||||| ||| |||||||||    
T  6594874 tggttactactttactttgctccacacatcatagtttgtattggtgtga-ttttgagtccaaattcacaa 6594806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 14202440 - 14202269
Alignment:
Q  52 ggaccgaactgggtaatcatttcttggtgtatttgttt--ctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattag 149  Q
    |||||||||||||| | || |  ||||||| |||||||  |||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  14202440 ggaccgaactgggtcaacaatctttggtgtgtttgtttatctcttctctctttatcttttgcttgtggttttaagcttttcactttgattactagattag 14202341  T
Q  150 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccaca 221  Q
    |||||||| |||||||||||||| ||||||| |||  ||||||||||| ||| ||||||||| | |||||||    
T  14202340 atctaggtgttgttattattgttgttgcttgcgttcactttgatattgattactactttcctttactccaca 14202269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 11690601 - 11690854
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt-atttgtttctcttctctcct 101  Q
    ||||||||||||||||||||| || || | | ||||| || |||||||||||||||||||| | | || |  |||||||  ||||||||||||||| | |    
T  11690601 ttgatagtggattggagagatcaacctctcccccatattacgtcaagttggaccgaactggatcaacaatctttggtgtgttttgtttctcttctccctt 11690700  T
Q  102 tatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtta 201  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||| ||||||         |||||||||||  | |||||||| ||||    
T  11690701 tatcttttgcttgtggttttgagcttttcactttaattcctagattagatctaggtgttgtta---------ttgcttgtgttcac-ttgatattagtta 11690790  T
Q  202 ttactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
     ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  11690791 ctactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 11690854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45099851 - 45100081
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  45099851 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 45099950  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  || ||||||||||| ||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  |||||||    
T  45099951 ctccttttatattttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgat 45100049  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| ||||||||| |||||||||||||    
T  45100050 attggttactactttcctttgctccacacatc 45100081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 2838132 - 2838272
Alignment:
Q  85 tgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtt 184  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||| |||||||| ||||| ||| |||||||    
T  2838132 tgtttctcttctcactttatcttttgcttgtggttttgagcttttcactttgattcctagattatatctaggtgttgttattgttgttgttgtttgtgtt 2838231  T
Q  185 tgctttgatattggttattactttcctctgctccacacatc 225  Q
    | |||||||| |||||| ||||||||| | |||||||||||    
T  2838232 tactttgatagtggttactactttcctttactccacacatc 2838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26353281 - 26353495
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| | ||| || |  | |||||||||||||||||||||| |||||| ||||| ||| ||| ||||||||||| |||||    
T  26353281 tcattgatagtggattggagagatcactctctcccttagagtaggtcaagttggaccgaaccgggtaaacattttttg-tgtgtttgtttctctcctctc 26353379  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
    |||||||||||||||||||||||   ||||||||||||||     |||||||||| || |||   |||||||| || |||||| || |||| ||||||||    
T  26353380 cttatcttttgcttgtggttttgtgtttttcactttgatt-----attagatctaagttttg---ttattgttgttccttgtgattactttaatattggt 26353471  T
Q  200 tattactttcctctgctccacaca 223  Q
    || ||||||||| ||||| |||||    
T  26353472 tactactttcctttgctctacaca 26353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 12123607 - 12123434
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 148  Q
    |||||||||||||| ||||  ||||||||| || |||||||||||| |||| |||||||||||||||| ||||| | ||||||| |||||| ||| ||||    
T  12123607 gttggaccgaactgagtaaatatttcttggcgtgtttgtttctcttatctctttatcttttgcttgtgattttgtatttttcac-ttgatttctagatta 12123509  T
Q  149 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 224  Q
    ||| ||||| |||||||| ||||| ||| ||| | || ||||||||||||||| ||||||||| ||||||||||||    
T  12123508 gatataggt-ttgttattgttgttgttgtttgaggttactttgatattggttactactttcctttgctccacacat 12123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36205736 - 36205506
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    ||||||| || ||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  36205736 tcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 36205637  T
Q  97 ctcctt--atcttttgcttgtggttt-tgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttga 192  Q
    ||||||  || ||||||||||||||| ||  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  |||||     
T  36205636 ctccttttatattttgcttgtggtttctg--cttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgt 36205539  T
Q  193 tattggttattactttcctctgctccacacatc 225  Q
    ||||||||| ||||||||| |||||||||||||    
T  36205538 tattggttactactttcctttgctccacacatc 36205506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5723327 - 5723080
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || || | ||||||| ||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  5723327 tcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctattct 5723228  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  ||||||  ||||||| ||| ||||||||||||| |||||||| ||| || ||| ||||| |  |||||||    
T  5723227 ctccttttatcttttgcttgtggttt-gtgcttttctttttgattcctagattagatctaggtgttgttattgttgattattgtttgtgctcactttgat 5723129  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| |||||| || ||||||||||||| | ||||  ||||||||    
T  5723128 attggttactactttactttgctccacacatcatagtttgtattggtgt 5723080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 1345602 - 1345730
Alignment:
Q  39 agtaggtcaagttggaccgaactgggtaatca-tttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttga 137  Q
    |||||||||  |||||||||||||||| | || ||||||||||| ||||||||||||||| | ||||||| || |||||||||||| |||||||||||||    
T  1345602 agtaggtcatattggaccgaactgggtcaacaatttcttggtgtgtttgtttctcttctcactttatcttatgattgtggttttgagcttttcactttga 1345701  T
Q  138 ttactaaattagatctaggtattgttatt 166  Q
    || ||| ||||||||||||| ||||||||    
T  1345702 ttcctagattagatctaggtgttgttatt 1345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4503204 - 4502975
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  4503204 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 4503105  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||||  ||||| |||||||| |||||  |||||||||||| || ||| |||||||||||||  ||||||| ||| || |||||||  ||  ||||| |    
T  4503104 ctccttttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgtt 4503006  T
Q  194 attggttattactttcctctgctccacacat 224  Q
    |||||||| ||||||||| | ||||||||||    
T  4503005 attggttactactttcctttactccacacat 4502975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17490219 - 17490096
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| |||||| ||||| || || | |||||||||| |||||||||||||||||| ||||||||  | | |||||||||||||||||    
T  17490219 tcattgatagtggattgtagagatcaatctctcccctagagtaggtcaatttggaccgaactgggtaaacatttcttaatatgtttgtttctcttctctc 17490120  T
Q  100 cttatcttttgcttgtggttttga 123  Q
     ||||| |||||||||||||||||    
T  17490119 tttatcatttgcttgtggttttga 17490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7815344 - 7815231
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    ||||| |||||||||||||||||| ||||| ||  |||||||  |||| |||||| |||||||||||  |||||||||||| |||||||||||||| ||     
T  7815344 tcatttatagtggattggagagattaatctctccacatagtatatcaaattggactgaactgggtaaatatttcttggtgtgtttgtttctcttctttct 7815245  T
Q  101 ttatcttttgcttg 114  Q
    ||||||||||||||    
T  7815244 ttatcttttgcttg 7815231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 13121864 - 13122124
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||||||||||||||| ||| || ||||| || |||| | || || |||||||||  |  ||||||| ||||| ||| ||| |||||||||||||||||    
T  13121864 tcattgatagtggattgaagaaatcaatctctcctccaaactatgttaagttggacttat-tgggtaaacatttattgttgtgtttgtttctcttctctc 13121962  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||||||||    ||||||| |||||| ||| |||| |||||||| |||||||| |||||  ||||||   ||  |||||||||| |    
T  13121963 tttatcttttgcttgtggttttatgtttttcac-ttgatttctagattacatctaggt-ttgttattgttgttactgcttgatgttattttgatattgat 13122060  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || |||||| || | ||||||||||| | ||||| |||||||| | |||||  |||||||||||||    
T  13122061 tagtacttttctttactccacacatcatagtttt-attggtgtga-ttttgtgtccgaattcacaa 13122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4484401 - 4484169
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttc--tcttc- 95  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||| ||||||||| | || |  ||||||| |||||||   |||||     
T  4484401 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatctttggtgtctttgttttcttcttcc 4484302  T
Q  96 -tctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttg 191  Q
     |||||||  ||||| |||||||||||||   |||||||||||| || ||| ||||||||||||| |||||||| ||| || |||||||   |  |||||    
T  4484301 ctctccttttatcttgtgcttgtggtttttg-cttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcactttg 4484203  T
Q  192 atattggttattactttcctctgctccacacatc 225  Q
     ||||||||| ||||||||| |||||||||||||    
T  4484202 ttattggttactactttcctttgctccacacatc 4484169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35446955 - 35446874
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| | ||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  35446955 tcattgatagtggattggagagatcactctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 35446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45727026 - 45727091
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||    
T  45727026 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggt 45727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 30833443 - 30833615
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctctt-- 94  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||| ||||||||| | || |  ||||||| |||||||  |||||      
T  30833443 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtctttgttttcctcttcc 30833542  T
Q  95 ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||||||| ||||||||    
T  30833543 ctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttatt 30833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42288181 - 42288101
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgggt-aatcatttcttggtg 80  Q
    ||||||||| |||||||||||||| ||||| || ||| | ||||||||||||||||||||||||| ||| |||||||||||    
T  42288181 tcattgataatggattggagagatcaatctctccccagattaggtcaagttggaccgaactgggtcaataatttcttggtg 42288101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 28672036 - 28672151
Alignment:
Q  9 agtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatct 106  Q
    |||||||||||||||| ||||| || |||| |||||||||  ||||||||||| | |||||  || |||| |||| ||||||||||||||||| |||||     
T  28672036 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattaggtaaatatatctttgtgtgtttgtttctcttctctctttatcc 28672135  T
Q  107 tttgcttgtggttttg 122  Q
    |||||||||| |||||    
T  28672136 tttgcttgtgattttg 28672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42019941 - 42019821
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 98  Q
    |||||||||||| ||| ||||||| ||||| ||| ||||||||||| |  |||||||| || ||| ||| || |||||||||| ||||||||||||||||    
T  42019941 tcattgatagtgaatttgagagatcaatctcttccccatagtaggttattgttggaccaaattggataaacacttcttggtgtgtttgtttctcttctct 42019842  T
Q  99 ccttatcttttgcttgtggttt 120  Q
    | |||| |||||| ||||||||    
T  42019841 ctttat-ttttgcctgtggttt 42019821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17450675 - 17450735
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaact 61  Q
    |||||||||||||||||||||||| ||||| ||  || |||||||||||||||||||||||    
T  17450675 tcattgatagtggattggagagatcaatctctccacagagtaggtcaagttggaccgaact 17450735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1631803 - 1631741
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactg 62  Q
    ||||||||||||||||||||| || ||||| || |||| ||||||||||||||||||||||||    
T  1631803 tcattgatagtggattggagaaatcaatctctcctccagagtaggtcaagttggaccgaactg 1631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33648269 - 33648351
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||| ||||||||||||| ||||| || |||| |||||||||  ||||||||||||||||||| ||||| |||||||    
T  33648269 tcattgatagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaacatttattggtgt 33648351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 41446315 - 41446357
Alignment:
Q  78 gtgtatttgtttctcttctctccttatcttttgcttgtggttt 120  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  41446315 gtgtgtttgtttctcttctctctttatcttttgcttgtggttt 41446357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 3491615 - 3491565
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  3491615 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 3491565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7451215 - 7451295
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||| |||||| ||||| | ||| | |||||||||||||||| |||||||||| | ||||| |||||||    
T  7451215 tcattgatagtggattgcagagatcaatctctcctctacagtaggtcaagttgga-cgaactgggtgaacatttattggtgt 7451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 9296639 - 9296675
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9296639 tgctccacacatctttgttttcattggtgtgagtttt 9296675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 242
Target Start/End: Complemental strand, 21629819 - 21629784
Alignment:
Q  207 ttcctctgctccacacatctttgttttcattggtgt 242  Q
    ||||| ||||||||||||||||||||||||||||||    
T  21629819 ttcctttgctccacacatctttgttttcattggtgt 21629784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 36191192 - 36191103
Alignment:
Q  134 ttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 224  Q
    |||||| ||| ||||||||||||| |||||||| || || ||||||| | ||| |||||||||||||| |  ||| || ||||||||||||    
T  36191192 ttgattcctagattagatctaggt-ttgttattgttattgttgcttgaggttgatttgatattggttactgattttctttgctccacacat 36191103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 7597029 - 7596960
Alignment:
Q  53 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 122  Q
    |||||||||  ||||  |||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||    
T  7597029 gaccgaactaagtaaatatttgttggtgtgtttatttctcttctctctttatcttttgcttttgtttttg 7596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 42412117 - 42412162
Alignment:
Q  3 attgatagtggattggagagataaatctttctccatagtaggtcaa 48  Q
    |||||||||||||||||||||| ||||| || ||| ||||||||||    
T  42412117 attgatagtggattggagagatcaatctctccccagagtaggtcaa 42412162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 14291347 - 14291311
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14291347 tgctccacacacctttgttttcattggtgtgagtttt 14291311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24398155 - 24398219
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactgg 63  Q
    ||||||||| |||||||||||||| ||||| | | |||||||||||||  |||||||||||||||    
T  24398155 tcattgataatggattggagagatcaatctctcccccatagtaggtcattgttggaccgaactgg 24398219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 3038919 - 3038727
Alignment:
Q  75 ttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttt 174  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |    
T  3038919 ttggtgtgtttgtttcttttctctctttatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttattattgttgt 3038820  T
Q  175 tgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaata 267  Q
    | |||| ||||||||||||||||||||||||||||||| ||||| ||||||| | ||||  |||||| | | |||||| | |||||||||||||    
T  3038819 tacttgttgtttgctttgatattggttattactttcctttgctcgacacatcatagtttgtattggtctga-ttttgagttcgaattcacaata 3038727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9183102 - 9182872
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || |||| | || |||||||||||||||||||||| | || |  ||||||| |||||   |||||||||    
T  9183102 tcattgatagtggattggagagatcaatctctcctccagattatgtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctc 9183003  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgata 194  Q
    |||  |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| ||| || |||||||||||  ||||||||    
T  9183002 tccctttatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgata 9182903  T
Q  195 ttggttattactttcctctgctccacacatc 225  Q
    ||||||| ||||||||| |||||||||||||    
T  9182902 ttggttactactttcctttgctccacacatc 9182872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 16569119 - 16569347
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctc--ttctc 97  Q
    |||||||||||||||||||||||| ||||| || |||| | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||  |||||    
T  16569119 tcattgatagtggattggagagatcaatctctcctccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctc 16569218  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
    || ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  || |||| ||||| ||||||| |||  ||||||| |||    
T  16569219 tctttatcttttgcttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttg 16569318  T
Q  198 gttattactttcc-tctgctccacacatc 225  Q
    |||| |||||||| | |||||||||||||    
T  16569319 gttactactttccttttgctccacacatc 16569347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 26954357 - 26954093
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||||| ||| | || |  ||||||  |||||||||||||||||    
T  26954357 tcattgatagtggattggagagatcaatctctcccccaaagtaggtcaagttggaccgaactaggtcaacaatctttggtgactttgtttctcttctctc 26954258  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||  |||| ||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||| ||||| || ||| ||||| |||||| ||||||    
T  26954257 tttacatttttcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgttatttcttatgtttactttgaaattggt 26954158  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||| | ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  26954157 tactactttcttttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 26954093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 28137479 - 28137213
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttg--tttctcttctc 97  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||| || || | ||||||||||| | |||   ||| |||||||    
T  28137479 tcattgatagtggattggagagatcaatctctcccccagagtaggtcaagttggaccgaattgtgtgaacatttcttggtatgttttgttttatcttctc 28137380  T
Q  98 tccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattg 197  Q
     | ||||||||||||||||||| ||  ||||||||||||||| ||| |||||||||| || |||||||| | ||| |||||||||||| |||||||||||    
T  28137379 cctttatcttttgcttgtggttatgtgcttttcactttgattcctatattagatctatgtgttgttattgtcgttattgcttgtgtttactttgatattg 28137280  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||||||||| |||||||||| || | ||||  |||||||| | ||||||  ||||||||||||    
T  28137279 gttactactttcctttgctccacacgtcatagtttgtattggtgtga-ttttgagaccgaattcacaa 28137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 265
Target Start/End: Complemental strand, 14521710 - 14521480
Alignment:
Q  39 agtaggtcaagttggaccgaactgggtaatcattt-cttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttga 137  Q
    |||||||||  |||||||||||| ||| | ||||| |||||||| ||| ||||| ||||| | ||||||| ||||||||||||||| |||||||||||||    
T  14521710 agtaggtcatattggaccgaactaggtcaacattttcttggtgtgtttatttcttttctcactttatcttatgcttgtggttttgagcttttcactttga 14521611  T
Q  138 ttactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtta----ttactttcctctgctccacacatctttgtttt 233  Q
    || ||| ||||||||||||| ||||| |||||||| |||||||||||| |||||| ||||||||     |||||| || ||||||||||||| | | |||    
T  14521610 ttcctagattagatctaggtgttgttgttattgttgttgcttgtgtttactttgaaattggttactacgtacttttctttgctccacacatcatag-ttt 14521512  T
Q  234 cattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||| |||||||| |||||||||||||    
T  14521511 cattggtgtgagttttgagtccgaattcacaa 14521480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 33211256 - 33211060
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    ||||| ||| |||||||||||||| ||||| || || | ||||||||||||||||||||||||||| | || |  ||||| | |||||||||||||||||    
T  33211256 tcatttataatggattggagagatcaatctctcccccagagtaggtcaagttggaccgaactgggtcaacaatctttggtatgtttgtttctcttctctc 33211157  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 196  Q
     ||||||||||||||||||||||   |||||||||||||| ||| ||||||||||||| || ||||| ||||| |||||||||||| |||| |||||    
T  33211156 tttatcttttgcttgtggttttgtgattttcactttgattcctagattagatctaggtgttattattgttgttattgcttgtgtttactttaatatt 33211060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 33160423 - 33160192
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||| ||||||||||||||| ||||| || |||| ||||  ||||||| ||||| |||||||| | || |  ||||||| |||||||||||  |||    
T  33160423 tcattgatggtggattggagagatcaatctctcctccagagtatttcaagtttggaccaaactgggtgaacaatctttggtgtgtttgtttctctcttct 33160324  T
Q  97 ctcctt---atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgat 193  Q
    ||||||   |||||||| |||||||||||  ||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| ||| ||||||     
T  33160323 ctcctttttatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttaatattgttgttgcttgtatttactttgaa 33160224  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||| || |||||| |||||||||||||    
T  33160223 attggttactattttcctttgctccacacatc 33160192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5409140 - 5408894
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||||  ||  || | ||||||| |||||||||||  |||    
T  5409140 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactggtgaacaatct-ttggtgtgtttgtttctctcttct 5409042  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||||||| |||||||| ||| || ||||||||| |  |||||||    
T  5409041 ctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgat 5408943  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  5408942 attggttactactttcctttgctccacacatcatagtttgtattggtgt 5408894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5413465 - 5413219
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||||  ||  || | ||||||| |||||||||||  |||    
T  5413465 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactggtgaacaatct-ttggtgtgtttgtttctctcttct 5413367  T
Q  97 ctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgat 193  Q
    ||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||||||| |||||||| ||| || ||||||||| |  |||||||    
T  5413366 ctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgat 5413268  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  5413267 attggttactactttcctttgctccacacatcatagtttgtattggtgt 5413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 31404746 - 31404516
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||| |||| |||||||||||||||| | || |  ||||||| ||||||  ||||||||    
T  31404746 tcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 31404647  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  ||||||||||||||||| ||||  |||| | |||||||| ||| |||||||||||||  ||||||| ||| || ||||||||| |  |||||||    
T  31404646 ctccttttatcttttgcttgtgg-tttgtgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgat 31404548  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||| ||| || |||||| |||||||||||||    
T  31404547 attgattactattttcctttgctccacacatc 31404516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 16452400 - 16452169
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  16452400 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 16452301  T
Q  97 ctccttatct---tttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttga 192  Q
    |||||| | |   |||||||||||||| |  ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||| ||  |||||     
T  16452300 ctccttttatatttttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttgtattcactttgt 16452202  T
Q  193 tattggttattactttcctctgctccacacatc 225  Q
    ||||||||| ||||||||| | |||||||||||    
T  16452201 tattggttactactttcctttactccacacatc 16452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5406271 - 5406027
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||| |||||||||||| | || |  ||||||| ||||||  ||||||||    
T  5406271 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 5406172  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  |||||||||| |||||| ||||  |||||| |||||||| ||| ||||||||||||   || |||||||| || ||||||||| |  |||| ||    
T  5406171 ctccttttatcttttgtttgtgg-tttgtgcttttctctttgattcctagattagatctagg---tgctattattgattattgcttgtgctcactttaat 5406076  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| |||||| || | ||||||||||| | ||||  ||||||||    
T  5406075 attggttactacttttctttactccacacatcatagtttgtattggtgt 5406027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5410596 - 5410352
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||| |||||||||||| | || |  ||||||| ||||||  ||||||||    
T  5410596 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttct 5410497  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  |||||||||| |||||| ||||  |||||| |||||||| ||| ||||||||||||   || |||||||| || ||||||||| |  |||| ||    
T  5410496 ctccttttatcttttgtttgtgg-tttgtgcttttctctttgattcctagattagatctagg---tgctattattgattattgcttgtgctcactttaat 5410401  T
Q  194 attggttattactttcctctgctccacacatctttgttttcattggtgt 242  Q
    |||||||| |||||| || | ||||||||||| | ||||  ||||||||    
T  5410400 attggttactacttttctttactccacacatcatagtttgtattggtgt 5410352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 30834607 - 30834375
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggt-aatcatttcttggtgtatttgttt--ctcttc 95  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| ||| || | ||||||| |||||||  ||||||    
T  30834607 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatct-ttggtgtgtttgtttatctcttc 30834509  T
Q  96 tctcctt--atcttttgcttgtggttt-tgaacttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttg 191  Q
    |||||||  || ||||||||||||||| ||   ||||||||||||||  || |||||||||||||  ||||||| ||| || |||||||  ||  |||||    
T  30834508 tctccttttatattttgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgcattcactttg 30834409  T
Q  192 atattggttattactttcctctgctccacacatc 225  Q
     ||||||||| || |||||| |||||||||||||    
T  30834408 ttattggttactattttcctttgctccacacatc 30834375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21589028 - 21589109
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  21589028 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 21589109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21593761 - 21593842
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||    
T  21593761 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 21593842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 2171603 - 2171368
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgtt--tctcttc 95  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||||||||||  |||||||    
T  2171603 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttc 2171504  T
Q  96 tctcc---ttatcttttgcttgtggttt-tg-aacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctt 189  Q
    |||||   ||||||| |||||||| ||| ||    |||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||      |||    
T  2171503 tctcccttttatcttgtgcttgtgttttatgttttttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcacacactt 2171404  T
Q  190 tgatattggttattactttcctctgctccacacatc 225  Q
    || || |||||| ||||||||| |||||||||||||    
T  2171403 tgttagtggttactactttcctttgctccacacatc 2171368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 4045566 - 4045671
Alignment:
Q  51 tggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 150  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||| || |||||||||   ||||||| ||||||  || ||||||    
T  4045566 tggaccgaactaggtaagcatttcttggtgtgtttgtttctcttctctctttatcttttactcgtggttttgtttttttcac-ttgattcttagattaga 4045664  T
Q  151 tctaggt 157  Q
    |||||||    
T  4045665 tctaggt 4045671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26830194 - 26830113
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||| ||||||||| | |||||||||||||    
T  26830194 tcattgatagtggattggagagatcaatctctcctccaaagtaggtcaagtttgactgaactgggtgaacatttcttggtgt 26830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5043724 - 5043806
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||||  ||||||||||||||||| | |||||||||||||    
T  5043724 tcattgatagtagattggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 5043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2973010 - 2972929
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| || || | ||||||||||||| ||||||||| ||| | |||||||||||||    
T  2973010 tcattgatagtggattggagagatcaatctctcctcaagagtaggtcaagttcgaccgaactaggtgaacatttcttggtgt 2972929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 12221126 - 12221053
Alignment:
Q  49 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 122  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||| | || ||||||||||| ||| ||||||    
T  12221126 gttggaccgaactgggtaaacatttcttggtgtgtttatttctcttatatctttatcttttgcgtgtagttttg 12221053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6097522 - 6097456
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  6097522 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 6097456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17763087 - 17763169
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||| ||| ||||| | ||||| ||||| ||||| |||||||||||| ||| | |||||||||||||    
T  17763087 tcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaacatttcttggtgt 17763169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 5675005 - 5675041
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5675005 tgctccacacatctttgttttcattggtgtgagtttt 5675041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 26800690 - 26800766
Alignment:
Q  7 atagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||| ||||| || |||| |||||||||  ||||||||||||||| | | |||||||||||||    
T  26800690 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgt 26800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3072830 - 3072739
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgttt 89  Q
    |||||||||||| ||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||| |||||||    
T  3072830 tcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttt 3072739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 412199 - 412265
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    |||||||||||||||| ||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  412199 tcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 412265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 603156 - 603094
Alignment:
Q  4 ttgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggt 65  Q
    |||||||||||||||||| || ||||| || |||  | |||||||||||||||||||||||||    
T  603156 ttgatagtggattggagaaatcaatctctccccaagattaggtcaagttggaccgaactgggt 603094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3808779 - 3808717
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaact 61  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||||| | ||||||||||||    
T  3808779 tcattgatagtggattggagagatcaatctctcctccagagtaggtcatgattggaccgaact 3808717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17758120 - 17758202
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| |||||   ||| | ||||| ||||| |||||||||||| ||| | |||||||||||||    
T  17758120 tcattgatagtggattggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaacatttcttggtgt 17758202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 30126032 - 30126061
Alignment:
Q  213 tgctccacacatctttgttttcattggtgt 242  Q
    ||||||||||||||||||||||||||||||    
T  30126032 tgctccacacatctttgttttcattggtgt 30126061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 602957 - 602905
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  602957 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 602905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 22424891 - 22424815
Alignment:
Q  7 atagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||| ||||| || | || |||||||||  ||||||||| ||||||| | |||||||||||||    
T  22424891 atagtggattggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaacatttcttggtgt 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 149168 - 148914
Alignment:
Q  1 tcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 99  Q
    |||||||||||||||||||||||| ||||| || || | ||||||| ||||||||||||||||||| | || |  |||||||||||||||||||||||||    
T  149168 tcattgatagtggattggagagatcaatctctcccccagagtaggttaagttggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctc 149069  T
Q  100 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 199  Q
     |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| ||||| ||||||         |||||||||||| ||||||| |||||    
T  149068 tttatcttttgcttgtggttttgtacttttca-tttgattcctagattagatttaggtgttgtta---------ttgcttgtgtttactttgatgttggt 148979  T
Q  200 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    || ||||||||| ||||||||||||  | ||||  |||| ||| | |||||| |||||||||||||    
T  148978 tactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagtccgaattcacaa 148914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 20483 - 20218
Alignment:
Q  4 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc 100  Q
    |||||| |||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || || ||||||| ||||||  ||||||||||||    
T  20483 ttgatattggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatttttggtgtgtttgttcctctcttctctcc 20384  T
Q  101 --ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattatt-gtttttgcttgtgtttgctttgatattg 197  Q
      ||||||||||||||||||||||   |||||||||||||| ||| |||||||||||||  ||||||| ||  || |||||||||||  |||||| ||||    
T  20383 ctttatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttaattattgcttgtgttcactttgacattg 20284  T
Q  198 gttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    |||| ||| ||||| ||||||||||||| | ||||  |||||| | ||  |||| |||||||||||||    
T  20283 gttactaccttcctttgctccacacatcatagtttgtattggtatgag--ttgagtccgaattcacaa 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 114699 - 114930
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttct 96  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||| ||| || ||||||||||| | | || |  |||||||  |||||  ||||||||    
T  114699 tcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagaccgaactggatgaacaatctttggtgtgcttgtttctctcttct 114798  T
Q  97 ctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgtttgctttgat 193  Q
    ||||  ||||||||| ||||| ||||||  ||||||||||||||| ||| ||||||| ||||| |||||||| ||| || ||| |||||||  |||||||    
T  114799 ctccttttatctttttcttgttgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttgattattgattgtgttcactttgat 114898  T
Q  194 attggttattactttcctctgctccacacatc 225  Q
    |||||||||||||||||| |||||||||||||    
T  114899 attggttattactttcctttgctccacacatc 114930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 75 - 265
Target Start/End: Complemental strand, 1494 - 1303
Alignment:
Q  75 ttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttt 174  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    |||||||||| ||| ||| |||||||||||||  ||||||  ||||| |    
T  1494 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatcgttgttat 1395  T
Q  175 tgcttgtgttt-gctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | |||||||||  |||| |||||| ||| ||||||||| ||||||||||||| | | ||  |||||||| |||||||  | |||||||||||    
T  1394 tacttgtgtttaactttaatattgattactactttcctttgctccacacatcatagattgtattggtgtgagttttgtgttcgaattcacaa 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 27511 - 27252
Alignment:
Q  3 attgatagtggattggagagataaatctttctcc-atagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcc 100  Q
    |||||||||||||||||||||| ||||| || || |||||||||||  ||||||||||| | ||||| ||||| ||| ||| ||| |||||||||||||     
T  27511 attgatagtggattggagagatcaatctctcccccatagtaggtcattgttggaccgaattaggtaaacatttattgatgtgtttatttctcttctctct 27412  T
Q  101 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 200  Q
    ||| ||||||||||||||||||   ||||||| |||||| ||| |||   |||| || ||||||||||| ||  |||||| | || |||| |||||||||    
T  27411 ttaccttttgcttgtggttttgtgtttttcac-ttgattcctagatttcttctaagt-ttgttattatttttgctgcttgaggttactttcatattggtt 27314  T
Q  201 attactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 265  Q
    | ||| ||||| | |||||||| |||  ||||  |||| ||| || ||||| |||||||||||||    
T  27313 actac-ttccttttctccacacttctaagttt--attgatgtgagatttgagtccgaattcacaa 27252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 434630 - 434801
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctct--tct 96  Q
    |||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||||||| | || |  ||||||| |||||||||||  |||    
T  434630 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatatttggtgtgtttgtttctctcttct 434729  T
Q  97 ctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    ||||   ||||||| |||||||| |||||  ||||||||||||||| ||| |||||||||||||  |||||||    
T  434730 ctcccttttatcttgtgcttgtg-ttttgtgcttttcactttgattcctagattagatctaggtgctgttatt 434801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 10589 - 10667
Alignment:
Q  4 ttgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||| |||||| ||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  10589 ttgatagtggattgaagagatcaatctctcctccagagtaggtcaagttggaccgaactgggtaaacatttcttggtgt 10667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 1012 - 1183
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt-atttgtt--tctcttc 95  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  |||||||  ||||||  |||||||    
T  1012 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgttttgtttctctcttc 1111  T
Q  96 tctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    |||||  ||||  ||||||||||| ||||  ||||||||||||||  ||| |||||||||||||  |||||||    
T  1112 tctccttttatactttgcttgtgg-tttgtgcttttcactttgatacctagattagatctaggtggtgttatt 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 8803 - 8634
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctcttctctc 99  Q
    ||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||  |||||| |||    
T  8803 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctc 8704  T
Q  100 ----cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
         ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||||||| ||||||||    
T  8703 ttcttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttatt 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 11229 - 11060
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgttt--ctctt--ctc 97  Q
    ||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| | || |  ||||||| |||||||  |||||  |||    
T  11229 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctc 11130  T
Q  98 tcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 166  Q
    |||  ||||||| ||||||||| ||||   ||||||||||| || ||| ||||||||||||| ||||||||    
T  11129 tccttttatcttgtgcttgtgg-tttgtgtttttcactttgtttcctagattagatctaggtgttgttatt 11060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11654 - 11777
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttcttggtgtatttgtt--tctcttc 95  Q
    |||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || ||||||||||||||||  |||||||    
T  11654 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttc 11753  T
Q  96 tctcc---ttatcttttgcttgtg 116  Q
    |||||   ||||||| ||||||||    
T  11754 tctcccttttatcttgtgcttgtg 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7424 - 7505
Alignment:
Q  1 tcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgt 81  Q
    ||||||||||||||||||| |||| ||||| || || | ||||||| ||||||||||||||||||| | |||||||||||||    
T  7424 tcattgatagtggattggaaagatcaatctctcctctagagtaggttaagttggaccgaactgggtgaacatttcttggtgt 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18075 - 17993
Alignment:
Q  1 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgt 81  Q
    |||||||||||||||||||||||| ||||| | |||||  |||||||||| ||||| |||||||||| | |||||||||||||    
T  18075 tcattgatagtggattggagagatcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaacatttcttggtgt 17993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 475 - 511
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||||||||||||| ||||||    
T  475 tgctccacacatctttgttttcattggtgtgagtttt 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 3794 - 3731
Alignment:
Q  4 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 65  Q
    ||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  3794 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 3731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 24279 - 24315
Alignment:
Q  213 tgctccacacatctttgttttcattggtgtaagtttt 249  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  24279 tgctccacacatctttgtttacattggtgtgagtttt 24315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University