View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16933_low_41 (Length: 234)

Name: NF16933_low_41
Description: NF16933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16933_low_41
NF16933_low_41
[»] chr8 (26 HSPs)
chr8 (38-143)||(2938222-2938326)
chr8 (58-109)||(13286125-13286176)
chr8 (58-109)||(44293569-44293620)
chr8 (58-108)||(17062356-17062406)
chr8 (58-108)||(17585952-17586002)
chr8 (58-108)||(37015853-37015903)
chr8 (56-108)||(11708978-11709030)
chr8 (56-108)||(27718911-27718963)
chr8 (58-108)||(8639904-8639954)
chr8 (58-108)||(11771701-11771751)
chr8 (58-108)||(13357458-13357508)
chr8 (58-108)||(19163553-19163603)
chr8 (58-108)||(23852905-23852955)
chr8 (58-108)||(33451366-33451416)
chr8 (22-56)||(35821998-35822032)
chr8 (62-108)||(37872975-37873021)
chr8 (58-108)||(39821878-39821928)
chr8 (58-108)||(43962041-43962091)
chr8 (59-108)||(8717492-8717541)
chr8 (59-108)||(10152451-10152500)
chr8 (59-104)||(16823206-16823251)
chr8 (59-108)||(17704008-17704057)
chr8 (10-55)||(23763347-23763392)
chr8 (56-108)||(6447181-6447233)
chr8 (64-108)||(30427731-30427775)
chr8 (24-56)||(38072673-38072705)
[»] scaffold0896 (1 HSPs)
scaffold0896 (56-108)||(3133-3185)
[»] chr6 (17 HSPs)
chr6 (56-108)||(8810632-8810684)
chr6 (56-108)||(7081671-7081723)
chr6 (58-108)||(32053782-32053832)
chr6 (59-108)||(20744133-20744182)
chr6 (58-106)||(5655326-5655374)
chr6 (54-105)||(4494891-4494942)
chr6 (58-108)||(331903-331953)
chr6 (58-108)||(655766-655816)
chr6 (62-108)||(5040850-5040896)
chr6 (58-108)||(8217377-8217427)
chr6 (58-108)||(12333585-12333635)
chr6 (58-108)||(17151230-17151280)
chr6 (58-108)||(21847188-21847238)
chr6 (58-108)||(26400858-26400908)
chr6 (58-108)||(29335592-29335642)
chr6 (19-56)||(13691645-13691682)
chr6 (59-108)||(17382079-17382128)
[»] chr7 (26 HSPs)
chr7 (58-109)||(8683064-8683115)
chr7 (58-107)||(40752857-40752906)
chr7 (58-109)||(39801700-39801751)
chr7 (58-108)||(10244721-10244771)
chr7 (58-108)||(46737779-46737829)
chr7 (61-108)||(8879764-8879811)
chr7 (33-108)||(48007564-48007639)
chr7 (58-108)||(3830062-3830112)
chr7 (58-108)||(5352323-5352373)
chr7 (58-108)||(19416508-19416558)
chr7 (58-108)||(27462453-27462503)
chr7 (58-108)||(38088034-38088084)
chr7 (59-108)||(3953436-3953485)
chr7 (58-103)||(5526719-5526764)
chr7 (58-107)||(5584641-5584690)
chr7 (58-107)||(5589601-5589650)
chr7 (56-109)||(14046627-14046680)
chr7 (56-109)||(14356657-14356710)
chr7 (58-103)||(32263001-32263046)
chr7 (58-107)||(35142167-35142216)
chr7 (58-103)||(36803832-36803877)
chr7 (59-108)||(41527555-41527604)
chr7 (58-103)||(48980481-48980526)
chr7 (61-97)||(6528082-6528118)
chr7 (64-108)||(23069874-23069918)
chr7 (60-108)||(44558791-44558839)
[»] chr2 (27 HSPs)
chr2 (58-108)||(22523029-22523079)
chr2 (58-109)||(7042783-7042834)
chr2 (58-108)||(7206119-7206169)
chr2 (58-108)||(9383226-9383276)
chr2 (58-108)||(9686451-9686501)
chr2 (56-108)||(34977196-34977248)
chr2 (61-109)||(44496716-44496764)
chr2 (58-109)||(7029407-7029458)
chr2 (58-109)||(27934873-27934924)
chr2 (58-108)||(2256965-2257015)
chr2 (58-108)||(4122030-4122080)
chr2 (24-54)||(5192122-5192152)
chr2 (58-104)||(8761585-8761631)
chr2 (58-104)||(15381627-15381673)
chr2 (58-108)||(16877118-16877168)
chr2 (58-108)||(16989249-16989299)
chr2 (58-108)||(20455885-20455935)
chr2 (62-108)||(22608525-22608571)
chr2 (58-108)||(33063980-33064030)
chr2 (61-103)||(40896531-40896573)
chr2 (58-108)||(44526122-44526172)
chr2 (63-108)||(10156016-10156061)
chr2 (58-107)||(22571883-22571932)
chr2 (60-108)||(12303575-12303623)
chr2 (56-108)||(18231490-18231542)
chr2 (60-108)||(34464426-34464474)
chr2 (58-106)||(36441186-36441233)
[»] chr1 (29 HSPs)
chr1 (58-108)||(52441528-52441578)
chr1 (58-109)||(1794590-1794641)
chr1 (58-109)||(34632163-34632214)
chr1 (59-108)||(5037391-5037441)
chr1 (58-108)||(29506821-29506871)
chr1 (58-108)||(42045389-42045439)
chr1 (58-108)||(44678034-44678084)
chr1 (19-56)||(4369348-4369385)
chr1 (58-107)||(18166596-18166645)
chr1 (57-108)||(21400040-21400091)
chr1 (58-109)||(27449461-27449512)
chr1 (57-104)||(36371061-36371108)
chr1 (57-108)||(48681950-48682001)
chr1 (58-108)||(1091173-1091223)
chr1 (58-104)||(7925358-7925404)
chr1 (58-108)||(8269385-8269435)
chr1 (58-108)||(19620570-19620620)
chr1 (62-108)||(24978242-24978288)
chr1 (58-108)||(25532967-25533017)
chr1 (57-107)||(26803469-26803519)
chr1 (58-108)||(27172739-27172789)
chr1 (58-108)||(29233991-29234041)
chr1 (58-104)||(40268204-40268250)
chr1 (58-108)||(45140023-45140073)
chr1 (58-108)||(49183167-49183217)
chr1 (23-56)||(37848001-37848034)
chr1 (64-108)||(8253739-8253783)
chr1 (57-109)||(15854104-15854156)
chr1 (59-107)||(24695554-24695602)
[»] chr5 (26 HSPs)
chr5 (58-107)||(19248473-19248522)
chr5 (58-108)||(30893927-30893977)
chr5 (58-108)||(37932324-37932374)
chr5 (64-109)||(20927639-20927684)
chr5 (58-109)||(27219282-27219333)
chr5 (57-107)||(5485179-5485229)
chr5 (58-108)||(6489001-6489051)
chr5 (58-108)||(6624770-6624820)
chr5 (58-108)||(15889405-15889455)
chr5 (58-108)||(18489093-18489143)
chr5 (58-108)||(21594403-21594453)
chr5 (58-108)||(21598520-21598570)
chr5 (58-108)||(22522818-22522868)
chr5 (58-108)||(24485693-24485743)
chr5 (58-108)||(28207126-28207176)
chr5 (58-108)||(34436845-34436895)
chr5 (58-108)||(35109394-35109444)
chr5 (58-108)||(36321511-36321561)
chr5 (22-56)||(38891923-38891957)
chr5 (58-108)||(42505866-42505916)
chr5 (58-103)||(10199013-10199058)
chr5 (59-108)||(16036822-16036871)
chr5 (63-108)||(17338720-17338765)
chr5 (23-56)||(30128343-30128376)
chr5 (63-108)||(31308660-31308705)
chr5 (61-109)||(17046331-17046379)
[»] chr3 (27 HSPs)
chr3 (58-107)||(52535883-52535932)
chr3 (58-108)||(10498712-10498762)
chr3 (58-108)||(16792991-16793041)
chr3 (61-108)||(27185474-27185521)
chr3 (58-109)||(33633334-33633385)
chr3 (65-108)||(50570206-50570249)
chr3 (58-108)||(1149086-1149136)
chr3 (58-108)||(7824801-7824851)
chr3 (58-108)||(16980371-16980421)
chr3 (58-108)||(18870742-18870792)
chr3 (58-108)||(21331434-21331484)
chr3 (58-108)||(21506775-21506825)
chr3 (22-56)||(22201406-22201440)
chr3 (56-109)||(24120436-24120490)
chr3 (58-108)||(29631180-29631230)
chr3 (58-108)||(33223862-33223912)
chr3 (58-108)||(35863830-35863880)
chr3 (58-108)||(43345024-43345074)
chr3 (58-108)||(44579630-44579680)
chr3 (62-108)||(49600281-49600327)
chr3 (58-108)||(53996293-53996343)
chr3 (58-95)||(21508936-21508973)
chr3 (59-108)||(25340941-25340990)
chr3 (58-107)||(46051903-46051951)
chr3 (61-109)||(8831361-8831409)
chr3 (61-109)||(14827522-14827570)
chr3 (60-108)||(21914852-21914900)
[»] scaffold0011 (2 HSPs)
scaffold0011 (58-109)||(223152-223203)
scaffold0011 (58-109)||(185257-185308)
[»] chr4 (32 HSPs)
chr4 (58-108)||(2186350-2186400)
chr4 (58-108)||(52270047-52270097)
chr4 (58-107)||(32180824-32180873)
chr4 (57-108)||(9946420-9946471)
chr4 (58-109)||(12671764-12671815)
chr4 (57-108)||(20799411-20799462)
chr4 (57-108)||(43034359-43034410)
chr4 (58-108)||(6087741-6087791)
chr4 (58-108)||(7030910-7030960)
chr4 (58-108)||(7230274-7230324)
chr4 (58-108)||(11949780-11949830)
chr4 (58-108)||(12322667-12322717)
chr4 (59-109)||(19854560-19854610)
chr4 (58-108)||(21052574-21052624)
chr4 (62-108)||(21317355-21317401)
chr4 (58-108)||(23809943-23809993)
chr4 (58-108)||(24665008-24665058)
chr4 (58-108)||(35021484-35021534)
chr4 (58-108)||(38453259-38453309)
chr4 (58-108)||(47814268-47814318)
chr4 (58-108)||(50362156-50362206)
chr4 (58-108)||(51002281-51002331)
chr4 (59-108)||(24885817-24885866)
chr4 (62-107)||(28751209-28751254)
chr4 (59-108)||(37193244-37193293)
chr4 (19-56)||(39270448-39270485)
chr4 (58-103)||(50180240-50180285)
chr4 (24-56)||(4825264-4825296)
chr4 (56-108)||(13121536-13121588)
chr4 (64-108)||(20383488-20383532)
chr4 (64-108)||(51458678-51458722)
chr4 (56-108)||(54857632-54857684)
[»] scaffold0118 (2 HSPs)
scaffold0118 (61-108)||(39995-40042)
scaffold0118 (57-108)||(45405-45456)
[»] scaffold0040 (1 HSPs)
scaffold0040 (58-108)||(56778-56828)
[»] scaffold0608 (1 HSPs)
scaffold0608 (58-103)||(700-745)


Alignment Details
Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 2938326 - 2938222
Alignment:
Q  38 atattataaatttttctgcggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaagacgtgggctgtgcatcaaacccctggcac 137  Q
    ||||||||||||||||||| || | |||||||||| |||||||||||| |||| ||||||||||||||||||| || |||| ||||||||||||||||||    
T  2938326 atattataaatttttctgcagttcccgtgagcttaactcagtttgtatggtca-tacataatatatgcaagacctgagctgggcatcaaacccctggcac 2938228  T
Q  138 cacaac 143  Q
    ||||||    
T  2938227 cacaac 2938222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 13286125 - 13286176
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  13286125 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaga 13286176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 44293569 - 44293620
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||| ||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgtaaga 44293620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 17062406 - 17062356
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  17062406 gtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaag 17062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 17585952 - 17586002
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  17585952 gtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaag 17586002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 37015903 - 37015853
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| ||| || |||| |||||||||||||||    
T  37015903 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 37015853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 11708978 - 11709030
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  11708978 cggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 11709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 27718963 - 27718911
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||||  ||| | |||| |||||||||||||||    
T  27718963 cggtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaag 27718911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 8639904 - 8639954
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||||||| | |||| |||| || |||||||    
T  8639904 gtcctcgtgagcttagctcagtttgtatggacaatgcatagtacatgcaag 8639954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 11771701 - 11771751
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||| ||||||||||||||  || || ||||||||||||||||||||    
T  11771701 gtcctcgtaagcttagctcagttgatagagacaatacataatatatgcaag 11771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 13357508 - 13357458
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||| | |||| |||||||||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 13357458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 19163603 - 19163553
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||| ||||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaag 19163553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 23852905 - 23852955
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||  |||| | |||| |||||||||||||||    
T  23852905 gtcctcgtgagcttagctcagtcggtatggacaatgcataatatatgcaag 23852955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 33451416 - 33451366
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| |  ||| |||||||||||||||    
T  33451416 gtcctcgtgagcttagctcagttggtatggataatgcataatatatgcaag 33451366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 35821998 - 35822032
Alignment:
Q  22 gggagagatctttataatattataaatttttctgc 56  Q
    ||||||| |||||||||||||||||||||||||||    
T  35821998 gggagaggtctttataatattataaatttttctgc 35822032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 37872975 - 37873021
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| |||| |||||| ||||| |||||||||    
T  37872975 tcgtgagcttagctcagttggtatggtcaatgcataaaatatgcaag 37873021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 39821878 - 39821928
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 39821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 43962091 - 43962041
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||| ||||||||||||| |||  | ||||||||||||||||||||    
T  43962091 gtcctcgtgggcttagctcagttggtaaggacaatacataatatatgcaag 43962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 8717541 - 8717492
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||| ||||||||||| |||| | |||| |||||||||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaag 8717492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 10152451 - 10152500
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||||| ||||  |||| |||||||||    
T  10152451 tcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaag 10152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 16823251 - 16823206
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    |||||||||||||| ||||||| |||||| | ||||||||||||||    
T  16823251 tcctcgtgagcttaactcagttggtatagactatacataatatatg 16823206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 17704008 - 17704057
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 17704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 23763347 - 23763392
Alignment:
Q  10 acagagacgttagggagagatctttataatattataaatttttctg 55  Q
    |||||||| || |||||||||  |||||||||||||||||||||||    
T  23763347 acagagacattggggagagattcttataatattataaatttttctg 23763392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 6447181 - 6447233
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||| ||| ||||||| |||| | |||| |||||||||||||||    
T  6447181 cggtcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaag 6447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 30427731 - 30427775
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| |||| | |||| |||||||||||||||    
T  30427731 gtgagcttagctcagttggtatggacaatgcataatatatgcaag 30427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 38072705 - 38072673
Alignment:
Q  24 gagagatctttataatattataaatttttctgc 56  Q
    |||||||| ||||||||||||||||||||||||    
T  38072705 gagagatccttataatattataaatttttctgc 38072673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 3133 - 3185
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  3133 cggtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 8810632 - 8810684
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  8810632 cggtcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 8810684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 7081723 - 7081671
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||||  || || ||||||||||||||||||||    
T  7081723 cggtcctcgtgagcttagctcagttgataaagacaatacataatatatgcaag 7081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 32053782 - 32053832
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 32053832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 20744133 - 20744182
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 20744182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 5655374 - 5655326
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgca 106  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||||||    
T  5655374 gtcctcgtgagcttagctcagttggtagggacaatacataatatatgca 5655326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 4494942 - 4494891
Alignment:
Q  54 tgcggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgc 105  Q
    ||||||||||||||||||||||||||| |||| | |||| ||||| ||||||    
T  4494942 tgcggtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgc 4494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 331953 - 331903
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| ||| || |||| |||||||||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaag 331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 655816 - 655766
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||| ||||||||||||||||| |||| | |||| |||||||||||||||    
T  655816 gtccttgtgagcttagctcagttggtatcgacaatgcataatatatgcaag 655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 5040896 - 5040850
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| ||| || ||| ||||||||||||||||    
T  5040896 tcgtgagcttagctcagttggtaaagacaaaacataatatatgcaag 5040850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 8217377 - 8217427
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| | ||| |  ||||||||||||||||||||    
T  8217377 gtcctcgtgagcttagctcagctggtagacacaatacataatatatgcaag 8217427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 12333635 - 12333585
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  12333635 gtcctcgtgagcttagctcagttagtatggacaatgcataaaatatgcaag 12333585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 17151230 - 17151280
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||| |||| |||  | ||||||||||||||||||||    
T  17151230 gtcctcgtgagcttagctaagttggtagtgacaatacataatatatgcaag 17151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 21847188 - 21847238
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| |||||||||||||||| |||  | ||||||||||||||||||||    
T  21847188 gtcctcttgagcttagctcagttggtagggacaatacataatatatgcaag 21847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 26400858 - 26400908
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||| ||||||||||||||| || |||| | ||||||||||||||||||||    
T  26400858 gtccacgtgagcttagctcaattggtatggacaatacataatatatgcaag 26400908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 29335642 - 29335592
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||||  |||| |||||||||||||||    
T  29335642 gtcctcgtgagcttaactcagttagtataaacaatgcataatatatgcaag 29335592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 13691645 - 13691682
Alignment:
Q  19 ttagggagagatctttataatattataaatttttctgc 56  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13691645 ttagggagagattcttataatattataaatttttctgc 13691682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 17382079 - 17382128
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||| | ||||  ||||||||||||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaag 17382128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 8683064 - 8683115
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  8683064 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaga 8683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 40752906 - 40752857
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  40752906 gtcctcgtgagcttagctcagttagtatggacaatacataatatatgcaa 40752857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 39801700 - 39801751
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||||||||    
T  39801700 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaga 39801751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 10244721 - 10244771
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 46737779 - 46737829
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||||| | | |||| |||||||||||||||    
T  46737779 gtcctcgtgagcttagctcagtttgtttggacaatgcataatatatgcaag 46737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 8879811 - 8879764
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||| ||||||| |||||| |||| |||||||||||||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatatatgcaag 8879764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 48007639 - 48007564
Alignment:
Q  33 ttataatattataaatttttctgcggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| |||| | |||||  |||||||||| ||||||| |||  | |||| |||||||||||||||    
T  48007639 ttataatattataaacttttttacggtcgccgtgagcttaactcagttggtaatgacaatgcataatatatgcaag 48007564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 3830062 - 3830112
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||| ||||||||||||||||  | |||| |||||||||||||||    
T  3830062 gtcctcgtgaacttagctcagtttgtagggacaatgcataatatatgcaag 3830112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 5352323 - 5352373
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||| ||||    
T  5352323 gtcctcgtgagcttagctcagttggtaaggacaatacataatatatacaag 5352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 19416508 - 19416558
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  19416508 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 19416558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 27462503 - 27462453
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||| |||||||||| |||| | |||| |||||||||||||||    
T  27462503 gtcctcgtgagcatagctcagttggtatggacaatgcataatatatgcaag 27462453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 38088084 - 38088034
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | ||| ||||||||||||||||    
T  38088084 gtcctcgtgagcttagctcagttggtaaggacaaaacataatatatgcaag 38088034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 3953436 - 3953485
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||  |||| | |||| |||||||||||||||    
T  3953436 tcctcgtgagcttagctcagtcggtatggacaatgcataatatatgcaag 3953485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 5526719 - 5526764
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 5584641 - 5584690
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||||||||||||| || ||| ||  ||||||||||||||||||    
T  5584641 gtcctcgtgagcttagctcaattggtaaagataatacataatatatgcaa 5584690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 5589601 - 5589650
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||||||||||||| || ||| ||  ||||||||||||||||||    
T  5589601 gtcctcgtgagcttagctcaattggtaaagataatacataatatatgcaa 5589650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 14046680 - 14046627
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||| ||||||| |||| |  ||| ||||||||||||||||    
T  14046680 cggtcctcgtgagcttatctcagttggtatgggtaatgcataatatatgcaaga 14046627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 14356710 - 14356657
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||| ||||||| |||| |  ||| ||||||||||||||||    
T  14356710 cggtcctcgtgagcttatctcagttggtatgggtaatgcataatatatgcaaga 14356657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 32263001 - 32263046
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||||    
T  32263001 gtcctcgtgagcttagctcagttggtatagacaatgtataatatat 32263046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 35142216 - 35142167
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||||||||||||||||  ||| | |||| ||||||||||||||    
T  35142216 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaa 35142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 36803832 - 36803877
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||    
T  36803832 gtcctcgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 41527555 - 41527604
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| |||| |||| | |||| |||||||||||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaag 41527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 48980481 - 48980526
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||    
T  48980481 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 48980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 6528082 - 6528118
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacata 97  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  6528082 ctcgtgagcttagatcagtttgtatagacaatacata 6528118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 23069918 - 23069874
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| ||| || ||| ||||||||||||||||    
T  23069918 gtgagcttagctcagttggtaaagacaacacataatatatgcaag 23069874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 44558839 - 44558791
Alignment:
Q  60 cctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||| ||||||||||| |||| | |||| |||||||||||||||    
T  44558839 cctcgtgagtttagctcagttggtatggacaatgcataatatatgcaag 44558791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 22523079 - 22523029
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  22523079 gtcctcgtgagcttagctcagttggtatggacaatacataatatatgcaag 22523029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 7042834 - 7042783
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  7042834 gtcctcgtgagattagctcagttggtaaaatcaatacataatatatgcaaga 7042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 7206119 - 7206169
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| ||| || |||| |||||||||||||||    
T  7206119 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 7206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 9383276 - 9383226
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 9383226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 9686451 - 9686501
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||||||||    
T  9686451 gtcctcgtgaatttagctcagttggtatagacaatacataatatatgcaag 9686501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 34977196 - 34977248
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| ||||||| |||| | |||| |||||||||||||||    
T  34977196 cggtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 34977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 44496764 - 44496716
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    |||||||||||||||||||| |||  | |||||||||||||||||||||    
T  44496764 ctcgtgagcttagctcagttggtaaggacaatacataatatatgcaaga 44496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 7029458 - 7029407
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||| ||||||||||| ||| |  |||||||||||||||||||||    
T  7029458 gtcctcgtgagattagctcagttggtaaaaacaatacataatatatgcaaga 7029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 27934924 - 27934873
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||| |||||    
T  27934924 gtcctcgtgagcttagctcagttggtaaggacaatacataatatatacaaga 27934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 2256965 - 2257015
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||| | |||| |||||||||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 2257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 4122080 - 4122030
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| | |||| | |||| |||||||||||||||    
T  4122080 gtcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaag 4122030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 5192122 - 5192152
Alignment:
Q  24 gagagatctttataatattataaatttttct 54  Q
    |||||||||||||||||||||||||||||||    
T  5192122 gagagatctttataatattataaatttttct 5192152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 8761631 - 8761585
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||    
T  8761631 gtcctcgtgagcttaactcagttggtatggacaatacataatatatg 8761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 15381627 - 15381673
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||||    
T  15381627 gtcctcgtgagcttagctcagttagtagggacaatacataatatatg 15381673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 16877118 - 16877168
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| | |||| | |||| |||||||||||||||    
T  16877118 gtcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaag 16877168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 16989249 - 16989299
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| | |||| | |||| |||||||||||||||    
T  16989249 gtcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaag 16989299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 20455885 - 20455935
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||| || |||| | |||| |||||||||||||||    
T  20455885 gtcctcgtgagcttagctcaattggtatggacaatgcataatatatgcaag 20455935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 22608525 - 22608571
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||    
T  22608525 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 22608571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 33063980 - 33064030
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||  ||| | |||| |||||||||||||||    
T  33063980 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaag 33064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 40896573 - 40896531
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    |||||||||||||||||||| |||||| |||| ||||||||||    
T  40896573 ctcgtgagcttagctcagttggtatagacaatgcataatatat 40896531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 44526122 - 44526172
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||| |||||    
T  44526122 gtcctcgtgagcttagctcagttggtatggacaatgcataatatacgcaag 44526172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 10156016 - 10156061
Alignment:
Q  63 cgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||| |||  | ||||||||||||||||||||    
T  10156016 cgtgagcttagctcagttggtaaggacaatacataatatatgcaag 10156061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 22571932 - 22571883
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||| ||||||||||||  ||||| |||| ||||||||||||||    
T  22571932 gtcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaa 22571883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 12303575 - 12303623
Alignment:
Q  60 cctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| |||||||||||||| ||| |||||||  ||||||||||||||    
T  12303575 cctcgttagcttagctcagttggtaaagtcaatgtataatatatgcaag 12303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 18231542 - 18231490
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| |||||||||||||||||| |||  | |||| |||||||||||||||    
T  18231542 cggtccccgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 18231490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 34464474 - 34464426
Alignment:
Q  60 cctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||| ||||||||||| |||| | |||| |||||||||||||||    
T  34464474 cctcgtgagtttagctcagttggtatggacaatgcataatatatgcaag 34464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 36441233 - 36441186
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgca 106  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||||||    
T  36441233 gtcctcgtgagct-agctcagttggtatagacaatgcataatatatgca 36441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 52441578 - 52441528
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  52441578 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 52441528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 1794590 - 1794641
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||||||||    
T  1794590 gtcctcgtgagcttagctcagttagtatggacaatgcataatatatgcaaga 1794641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 34632163 - 34632214
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||||||||||    
T  34632163 gtcctcgtgagcttagctcagttggtatagacaatgtataatatatgcaaga 34632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 5037391 - 5037441
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtc-aatacataatatatgcaag 108  Q
    |||||||||||||||||||||||||| || | |||||||||||||||||||    
T  5037391 tcctcgtgagcttagctcagtttgtagagacaaatacataatatatgcaag 5037441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 29506821 - 29506871
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| || |||| |||||| ||||||||||||||||||||    
T  29506821 gtcctcgtgagcttaacttagttggtatagacaatacataatatatgcaag 29506871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 42045439 - 42045389
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 42045389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 44678084 - 44678034
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| | ||||||||||||||||||||| |||| |||||||||||||||    
T  44678084 gtcctcataagcttagctcagtttgtatagacaatgcataatatatgcaag 44678034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 4369385 - 4369348
Alignment:
Q  19 ttagggagagatctttataatattataaatttttctgc 56  Q
    |||||||||||| |||||||||||||||||||||||||    
T  4369385 ttagggagagatttttataatattataaatttttctgc 4369348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 18166596 - 18166645
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  18166596 gtcctcgtgggcttagctcagttggtatagacaatgcataatatatgcaa 18166645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 21400091 - 21400040
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  21400091 ggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 21400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 27449512 - 27449461
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    |||||||||||||||||||||||  ||| | |||| ||||||||||||||||    
T  27449512 gtcctcgtgagcttagctcagttaatatggacaatgcataatatatgcaaga 27449461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 36371108 - 36371061
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    |||||||||||||||||||||||| ||| || |||| |||||||||||    
T  36371108 ggtcctcgtgagcttagctcagttggtagagacaatgcataatatatg 36371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 48682001 - 48681950
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||| ||||   |||| |||||||||||||||    
T  48682001 ggtcctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaag 48681950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 1091173 - 1091223
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||||| |||| |||||| ||||||||    
T  1091173 gtcctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaag 1091223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 7925358 - 7925404
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    ||||||||||||||||||||||| ||| || |||| |||||||||||    
T  7925358 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatg 7925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 8269435 - 8269385
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||| |||||||||||| |||  | ||||||||||||||||||||    
T  8269435 gtcctcgtgaacttagctcagttggtaaggacaatacataatatatgcaag 8269385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 19620570 - 19620620
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||| |||||||||||||||||| |||  | ||||||||||||||||||||    
T  19620570 gtccccgtgagcttagctcagttggtaaggacaatacataatatatgcaag 19620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 24978242 - 24978288
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  24978242 tcgtgagcttaactcagttggtatagataatacataatatatgcaag 24978288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 25532967 - 25533017
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||| |||||| |||| | |||| |||||||||||||||    
T  25532967 gtcctcgtgagcttagttcagttggtatggacaatgcataatatatgcaag 25533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 26803519 - 26803469
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||| |||||||||||| |||| | |||| ||||||||||||||    
T  26803519 ggtcctcgtgaacttagctcagttggtatggacaatgcataatatatgcaa 26803469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 27172789 - 27172739
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||| | ||| ||||||||||||||||    
T  27172789 gtcctcgtgagcttaactcagttggtatggacaaaacataatatatgcaag 27172739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 29234041 - 29233991
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||||||||||| |||||| |||| ||||| |||||||||    
T  29234041 gtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaag 29233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 40268204 - 40268250
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatg 104  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||    
T  40268204 gtcctcgtgagcttagctcagttggtatggacagtacataatatatg 40268250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 45140073 - 45140023
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||| |||||||||||||||||| |||| | |||| |||||||||||||||    
T  45140073 gtccccgtgagcttagctcagttggtatggacaatgcataatatatgcaag 45140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 49183167 - 49183217
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||||||||||| |||  | ||||||||||||||||||||    
T  49183167 gtcctcgtgagtttagctcagttggtaaggacaatacataatatatgcaag 49183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 37848001 - 37848034
Alignment:
Q  23 ggagagatctttataatattataaatttttctgc 56  Q
    ||||||||| ||||||||||||||||||||||||    
T  37848001 ggagagatccttataatattataaatttttctgc 37848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 8253739 - 8253783
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| |||| | |||| |||||||||||||||    
T  8253739 gtgagcttagctcagttggtatggacaatgcataatatatgcaag 8253783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 15854156 - 15854104
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||| |||||||||||||||| |||| | | || ||||||||||||||||    
T  15854156 ggtcctcatgagcttagctcagttggtatggacgatgcataatatatgcaaga 15854104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 24695554 - 24695602
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||| ||||||||||| ||||   |||||||||||||||||||    
T  24695554 tcctcgtgagtttagctcagttggtatgaacaatacataatatatgcaa 24695602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 19248473 - 19248522
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  19248473 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaa 19248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 30893927 - 30893977
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  30893927 gtcctcgtgagcttaactcagtttgtaaagacaatgcataatatatgcaag 30893977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 37932324 - 37932374
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 37932374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 20927639 - 20927684
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||    
T  20927639 gtgagcttagctcagttggtatggacaatacataatatatgcaaga 20927684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 27219282 - 27219333
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| | | || |||||||||||||||| ||||    
T  27219282 gtcctcgtgagcttagctcagttagcagagacaatacataatatatgtaaga 27219333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 5485179 - 5485229
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||||||||||||||||||| |||  | |||| ||||||||||||||    
T  5485179 ggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 6489001 - 6489051
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 6489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 6624770 - 6624820
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| | || | |||| |||||||||||||||    
T  6624770 gtcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaag 6624820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 15889405 - 15889455
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 15889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 18489143 - 18489093
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||| ||||| ||||||||||| |||||| |||| |||||||||||||||    
T  18489143 gtccttgtgagtttagctcagttggtatagacaatgcataatatatgcaag 18489093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 21594453 - 21594403
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||  ||| ||||||||  ||||||||||||||||||||    
T  21594453 gtcctcgtgagcttaattcaatttgtataaacaatacataatatatgcaag 21594403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 21598570 - 21598520
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||  ||| ||||||||  ||||||||||||||||||||    
T  21598570 gtcctcgtgagcttaattcaatttgtataaacaatacataatatatgcaag 21598520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 22522868 - 22522818
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| ||| |||| | |||| |||||||||||||||    
T  22522868 gtcctcgtgagcttagctcggttggtatggacaatgcataatatatgcaag 22522818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 24485693 - 24485743
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||| |||| |||| | |||| |||||||||||||||    
T  24485693 gtcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaag 24485743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 28207126 - 28207176
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 28207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 34436845 - 34436895
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  34436845 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 34436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 35109394 - 35109444
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||| |||||||||| ||||||| ||| || ||||||||||||||||||||    
T  35109394 gtccacgtgagcttaactcagttggtaaagacaatacataatatatgcaag 35109444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 36321561 - 36321511
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  36321561 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 36321511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 38891923 - 38891957
Alignment:
Q  22 gggagagatctttataatattataaatttttctgc 56  Q
    ||||||||| |||||||||||||||||||||||||    
T  38891923 gggagagatttttataatattataaatttttctgc 38891957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 42505866 - 42505916
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||| |||||||||||||| |||| | |||| |||||||||||||||    
T  42505866 gtcctcgtaagcttagctcagttggtatggacaatgcataatatatgcaag 42505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 10199013 - 10199058
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||    
T  10199013 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 16036822 - 16036871
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| ||||||||||||||| | || | ||||||||||||||||||||    
T  16036822 tcctcgagagcttagctcagttggcatggacaatacataatatatgcaag 16036871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 17338765 - 17338720
Alignment:
Q  63 cgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| || ||| || ||||||||||||||||||||    
T  17338765 cgtgagcttagctcaattggtaaagacaatacataatatatgcaag 17338720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 30128343 - 30128376
Alignment:
Q  23 ggagagatctttataatattataaatttttctgc 56  Q
    ||||||||||||||||| ||||||||||||||||    
T  30128343 ggagagatctttataattttataaatttttctgc 30128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 31308705 - 31308660
Alignment:
Q  63 cgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||| ||| || ||||| ||||||||||||||    
T  31308705 cgtgagcttagctcagttggtaaagacaatatataatatatgcaag 31308660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 17046331 - 17046379
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    |||||||||||| ||||||| |||| | |||| ||||||||||||||||    
T  17046331 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaga 17046379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 52535932 - 52535883
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  52535932 gtcctcgtgagcttaactcagttagtatagacaatacataatatatgcaa 52535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 10498762 - 10498712
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 16793041 - 16792991
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| ||||| |||||| |||| |||||||||||||||    
T  16793041 gtcctcgtgagcttagcacagttggtatagacaatgcataatatatgcaag 16792991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 27185474 - 27185521
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||||    
T  27185474 ctcgtgagcttagctcagttggtagggacaatacataatatatgcaag 27185521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 33633385 - 33633334
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||| ||||||| |||||| |||| ||||||||||| ||||    
T  33633385 gtcctcgtgagcttaactcagttagtatagacaatgcataatatatgtaaga 33633334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 50570249 - 50570206
Alignment:
Q  65 tgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||| |||||| |||| |||||||||||||||    
T  50570249 tgagcttagctcagttggtatagacaatgcataatatatgcaag 50570206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 1149136 - 1149086
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  1149136 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 1149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 7824801 - 7824851
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||| |||||||  ||||| ||||||||||||||||||||    
T  7824801 gtcctcgtgagtttaactcagttgatatagacaatacataatatatgcaag 7824851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 16980421 - 16980371
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  16980421 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 16980371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 18870792 - 18870742
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 18870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 21331484 - 21331434
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||  ||| | |||| |||||||||||||||    
T  21331484 gtcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaag 21331434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 21506825 - 21506775
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  21506825 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 21506775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 22201440 - 22201406
Alignment:
Q  22 gggagagatctttataatattataaatttttctgc 56  Q
    |||||||||| ||||||||||||||||||||||||    
T  22201440 gggagagatccttataatattataaatttttctgc 22201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 24120490 - 24120436
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtc-aatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||||| ||| || | ||| ||||||||||||||||    
T  24120490 cggtcctcgtgagcttagctcagttggtagagacaaatgcataatatatgcaaga 24120436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 29631180 - 29631230
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| |||||||||||||||| |||| | |||| |||||||||||||||    
T  29631180 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaag 29631230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 33223862 - 33223912
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| ||| |  |||| |||||||||||||||    
T  33223862 gtcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaag 33223912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 35863880 - 35863830
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||| |||||||||||||| |||  | ||||||||||||||||||||    
T  35863880 gtcctcgtaagcttagctcagttggtaaggacaatacataatatatgcaag 35863830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 43345074 - 43345024
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||||||||||| ||||   ||||||||||||||||||||    
T  43345074 gtcctcgtgagtttagctcagttggtatgaacaatacataatatatgcaag 43345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 44579630 - 44579680
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 44579680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 49600327 - 49600281
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| ||| || ||||| ||||||||||||||    
T  49600327 tcgtgagcttagctcagttagtagagacaataaataatatatgcaag 49600281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 53996293 - 53996343
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||| ||||||||||||||||| |||| | |||| |||||||||||||||    
T  53996293 gtccttgtgagcttagctcagttggtatggacaatgcataatatatgcaag 53996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 21508936 - 21508973
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaataca 95  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  21508936 gtcctcgtgagcttagctcagttagtatagacaataca 21508973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 25340990 - 25340941
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 25340941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 46051903 - 46051951
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    |||||||| |||||| ||||||| |||||| |||||||||||||||||||    
T  46051903 gtcctcgt-agcttaactcagttggtatagacaatacataatatatgcaa 46051951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 8831409 - 8831361
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||| |||||||||||||| ||||   |||||||||||||||||||||    
T  8831409 ctcgtaagcttagctcagttggtatgtacaatacataatatatgcaaga 8831361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 14827522 - 14827570
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    |||||||||||||||||||| |||| | |||| ||||| ||||||||||    
T  14827522 ctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaga 14827570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 21914900 - 21914852
Alignment:
Q  60 cctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| |||  | ||||||||||| ||||||||    
T  21914900 cctcgtgagcttagctcagttggtaatgacaatacataatgtatgcaag 21914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 223152 - 223203
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||||||||    
T  223152 gtcctcgtgagcttagctcagttggtatggacaatacataaaatatgcaaga 223203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 185257 - 185308
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||||||||||||||| |||| | |||| ||||| ||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaga 185308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 2186400 - 2186350
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 2186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 52270097 - 52270047
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 52270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 32180824 - 32180873
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||||||||||||||| |||||| |||| ||||| ||||||||    
T  32180824 gtcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaa 32180873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 9946420 - 9946471
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||| |||| | |||| ||||| |||||||||    
T  9946420 ggtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaag 9946471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 12671815 - 12671764
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    ||||||||||| ||||||||||| |||||| |||| ||||| ||||||||||    
T  12671815 gtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaaga 12671764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 20799462 - 20799411
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  20799462 ggtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 20799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 43034410 - 43034359
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||| ||||||| |||| | |||| |||||||||||||||    
T  43034410 ggtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaag 43034359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 6087741 - 6087791
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||| ||||||||||||||||| ||||||  ||| |||||||||||||||    
T  6087741 gtccttgtgagcttagctcagttggtatagataatgcataatatatgcaag 6087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 7030960 - 7030910
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||||| |||| ||||| |||||||||    
T  7030960 gtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaag 7030910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 7230274 - 7230324
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 7230324  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 11949830 - 11949780
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||| |||||||||||||||| |||| | |||| |||||||||||||||    
T  11949830 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaag 11949780  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 12322667 - 12322717
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  12322667 gtcctcgtgagcttagctcagttggtacggacaatgcataatatatgcaag 12322717  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 19854560 - 19854610
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaaga 109  Q
    |||| ||||||||||||||||| |||| | |||| ||||||||||||||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataatatatgcaaga 19854610  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 21052624 - 21052574
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||| ||||||||||| |||| |  |||||||||||||||||||    
T  21052624 gtcctcgtgagtttagctcagttggtatggataatacataatatatgcaag 21052574  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 21317401 - 21317355
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||    
T  21317401 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 21317355  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 23809943 - 23809993
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | |||  |||||||||||||||    
T  23809943 gtcctcgtgagcttagctcagttggtatggacaaagcataatatatgcaag 23809993  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 24665058 - 24665008
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| |  ||| |||||||||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaag 24665008  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 35021534 - 35021484
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||||  ||| | |||||||||| |||||||||    
T  35021534 gtcctcgtgagcttagctcagttgatatggacaatacataaaatatgcaag 35021484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 38453259 - 38453309
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| | || | |||| |||||||||||||||    
T  38453259 gtcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaag 38453309  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 47814318 - 47814268
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||| |||||||||||||| |||| | ||| ||||||||||||||||    
T  47814318 gtcctcgtaagcttagctcagttggtatggacaacacataatatatgcaag 47814268  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 50362206 - 50362156
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||  | |||| |||||||||||||||    
T  50362206 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 50362156  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 51002281 - 51002331
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||| ||||||| |||||| |||| ||||| |||||||||    
T  51002281 gtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaag 51002331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 24885866 - 24885817
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||| ||||||| |||| | |||||||||| |||||||||    
T  24885866 tcctcgtgagcttaactcagttggtatggacaatacataaaatatgcaag 24885817  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 28751209 - 28751254
Alignment:
Q  62 tcgtgagcttagctcagtttgtatagtcaatacataatatatgcaa 107  Q
    ||||||||||| ||||||| |||||  |||||||||||||||||||    
T  28751209 tcgtgagcttaactcagttagtataaacaatacataatatatgcaa 28751254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 37193244 - 37193293
Alignment:
Q  59 tcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||||| |||| | ||||  ||||||||||||||    
T  37193244 tcctcgtgagcttagctcagttagtatggacaatgtataatatatgcaag 37193293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 39270485 - 39270448
Alignment:
Q  19 ttagggagagatctttataatattataaatttttctgc 56  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  39270485 ttaggaagagatttttataatattataaatttttctgc 39270448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 50180285 - 50180240
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  50180285 gtcctcgtgagtttagctcaatttgtatagacaatatataatatat 50180240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 4825264 - 4825296
Alignment:
Q  24 gagagatctttataatattataaatttttctgc 56  Q
    |||||||| ||||||||||||||||||||||||    
T  4825264 gagagatccttataatattataaatttttctgc 4825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 13121536 - 13121588
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||| |||| |||  | |||| |||||||||||||||    
T  13121536 cggtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaag 13121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 20383488 - 20383532
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| |||| | |||| |||||||||||||||    
T  20383488 gtgagcttagctcagttggtatggacaatgcataatatatgcaag 20383532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 51458678 - 51458722
Alignment:
Q  64 gtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||| |||| | |||||||||| |||||||||    
T  51458678 gtgagcttagctcagttggtatggacaatacataaaatatgcaag 51458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 54857684 - 54857632
Alignment:
Q  56 cggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||| ||| |||||  |||| ||||| |||||||||    
T  54857684 cggtcctcgtgagcttagctcggttggtataaacaatgcataaaatatgcaag 54857632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 39995 - 40042
Alignment:
Q  61 ctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||||||| |||| | |||| |||||||||||||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 40042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 45405 - 45456
Alignment:
Q  57 ggtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    |||||||||||||||| ||||||| || | | ||||||||||||||||||||    
T  45405 ggtcctcgtgagcttaactcagttggtttggacaatacataatatatgcaag 45456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 56778 - 56828
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatatgcaag 108  Q
    ||||||||||||||||||||||| |||| | ||||  ||||||||||||||    
T  56778 gtcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaag 56828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 745 - 700
Alignment:
Q  58 gtcctcgtgagcttagctcagtttgtatagtcaatacataatatat 103  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  745 gtcctcgtgagtttagctcaatttgtatagacaatatataatatat 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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