View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16934_low_6 (Length: 228)
Name: NF16934_low_6
Description: NF16934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16934_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 31504726 - 31504838
Alignment:
| Q |
14 |
cataggtatataagcacgacctaatcaaaaacaagggtcaaatattttatatcccaaaaagtgagcagtctccaaacattcacatgcctacgtctttgtg |
113 |
Q |
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| T |
31504726 |
cataggtatataagcacgacctaatctaaaacaagggtcaaatattttatatcccaaaaagtgagcagtctccaaacattcacatgcctacgtctttgtg |
31504825 |
T |
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| Q |
114 |
tttatttcttatc |
126 |
Q |
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||||||||||||| |
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| T |
31504826 |
tttatttcttatc |
31504838 |
T |
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