View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16935_high_15 (Length: 251)
Name: NF16935_high_15
Description: NF16935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16935_high_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 26492168 - 26492408
Alignment:
| Q |
12 |
cataggttgccatccctttccatggaacataagggaggaaaattttgtcttattttgaaaacataaggaaaaatccaacaatagtacaaactagccagaa |
111 |
Q |
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| T |
26492168 |
cataggttgcaatccctttccatggaacataagggaggaaaattttgtcttattttgaaaacataaggaaaaatccaacaatagtacaaactagccagaa |
26492267 |
T |
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| Q |
112 |
aacaagcaaaatgacaattagagataaaaagagcaa-taatcaggacaaaattacacaaactaagaaataaataaaacaagtaaaacttgcggggcttaa |
210 |
Q |
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| T |
26492268 |
aacaagcaaaatgacaattagagataaaaagagcaattaatcaggacaaaattacacaaactaagaaataaataaaacaagtaaaacttgtggggcttaa |
26492367 |
T |
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| Q |
211 |
atagtaatttttgtatagctttgcttaattaattctttaat |
251 |
Q |
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| T |
26492368 |
atagtaatttttgtatagctttgcttaattaattctttaat |
26492408 |
T |
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