View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16942_low_9 (Length: 245)
Name: NF16942_low_9
Description: NF16942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16942_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 13923028 - 13922798
Alignment:
| Q |
1 |
aaaaaatatcaagccttggtttgtcattcggatgaaagagtttgaaaaactattcaatttggataatttattactaaaaacctatgcctgtctttaacag |
100 |
Q |
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| T |
13923028 |
aaaaaatatcaagccttggtttgtcattcggatgaaagagtttgaaaaactattcaatttggataatttattactaaaaacctatgcctgtctttaacag |
13922929 |
T |
|
| Q |
101 |
gaaaatatattaaaaatgaaagttgcaataacaaannnnnnngggtacaaaataacaaattttaaattatagagcaaaattatcaattttgaaaatcagg |
200 |
Q |
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| T |
13922928 |
ggaaatatattaaaaatgaaagttgcaataacaaatttttttgggtacaaaataacaaattttaaattatagagcaaaattatcaattttgaaaatcagg |
13922829 |
T |
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| Q |
201 |
gtgaatagtcgtccaaacgaacctaaaaatt |
231 |
Q |
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|||||| |||||||||||||||||||||||| |
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| T |
13922828 |
gtgaatggtcgtccaaacgaacctaaaaatt |
13922798 |
T |
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