View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16943_high_77 (Length: 202)
Name: NF16943_high_77
Description: NF16943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16943_high_77 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 25679486 - 25679320
Alignment:
| Q |
28 |
catagctaagaattgaaaagtaacctagaatttacaacacggtagtaaaccaaccacttgtgctataccatgatgatcgaacaaagatatacttctttga |
127 |
Q |
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| T |
25679486 |
catagctaagaattgaaaagtaacctagaatttataacatggtagtaaaccaaccacttgtgctataccatgatgatcaaacacagatatacttctttga |
25679387 |
T |
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| Q |
128 |
acttttctagatttcaatttttcctaggggatttcaatatcaagtttcaacaatatgattaatttga |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25679386 |
acttttctagatttcaatttttcctaggggatttcaatatcaagtttcaacaatatgattaatttga |
25679320 |
T |
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