View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16943_low_2 (Length: 922)

Name: NF16943_low_2
Description: NF16943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16943_low_2
NF16943_low_2
[»] chr5 (39 HSPs)
chr5 (60-374)||(28521632-28521945)
chr5 (408-682)||(28521276-28521548)
chr5 (742-912)||(28520962-28521132)
chr5 (305-378)||(41923209-41923282)
chr5 (304-375)||(3676471-3676542)
chr5 (304-370)||(2679842-2679908)
chr5 (305-369)||(9621898-9621962)
chr5 (301-365)||(29799701-29799765)
chr5 (301-367)||(15399877-15399943)
chr5 (301-375)||(17668087-17668161)
chr5 (304-366)||(18675679-18675741)
chr5 (301-375)||(19389781-19389855)
chr5 (301-366)||(13293937-13294002)
chr5 (301-368)||(35708715-35708782)
chr5 (301-371)||(38302311-38302381)
chr5 (304-366)||(43496837-43496899)
chr5 (301-366)||(1658240-1658305)
chr5 (301-366)||(1935060-1935125)
chr5 (301-366)||(3081285-3081350)
chr5 (301-366)||(4841662-4841727)
chr5 (301-366)||(6491247-6491312)
chr5 (301-366)||(37508343-37508408)
chr5 (301-361)||(12063939-12063999)
chr5 (301-375)||(344090-344162)
chr5 (304-366)||(6632712-6632773)
chr5 (304-374)||(8944100-8944170)
chr5 (301-359)||(12096973-12097031)
chr5 (304-366)||(14570006-14570068)
chr5 (304-366)||(15974403-15974465)
chr5 (304-366)||(38568334-38568395)
chr5 (301-366)||(9684744-9684809)
chr5 (301-366)||(10295546-10295611)
chr5 (301-366)||(15916946-15917011)
chr5 (301-366)||(17092960-17093025)
chr5 (309-366)||(18671075-18671132)
chr5 (301-366)||(27480125-27480190)
chr5 (301-366)||(33682435-33682500)
chr5 (306-375)||(35683431-35683500)
chr5 (505-574)||(37894444-37894513)
[»] scaffold0263 (1 HSPs)
scaffold0263 (304-366)||(12215-12277)
[»] chr7 (32 HSPs)
chr7 (304-366)||(38505300-38505362)
chr7 (300-374)||(41471493-41471567)
chr7 (301-375)||(14676284-14676358)
chr7 (304-366)||(43348195-43348257)
chr7 (301-366)||(1278001-1278066)
chr7 (301-366)||(33187800-33187865)
chr7 (301-368)||(38137992-38138059)
chr7 (301-368)||(46449233-46449300)
chr7 (301-368)||(47275955-47276022)
chr7 (304-366)||(13044210-13044272)
chr7 (304-366)||(17818349-17818411)
chr7 (304-366)||(33872076-33872138)
chr7 (304-366)||(35264848-35264910)
chr7 (301-375)||(38991426-38991500)
chr7 (304-366)||(42266963-42267025)
chr7 (304-366)||(43741758-43741820)
chr7 (301-366)||(21687496-21687561)
chr7 (301-366)||(25335370-25335435)
chr7 (303-364)||(38233691-38233752)
chr7 (301-366)||(41002204-41002269)
chr7 (301-366)||(43665122-43665187)
chr7 (314-366)||(30081035-30081087)
chr7 (301-365)||(31891340-31891403)
chr7 (304-375)||(2826203-2826274)
chr7 (301-359)||(4787956-4788014)
chr7 (304-365)||(4126025-4126086)
chr7 (301-366)||(5968006-5968071)
chr7 (304-365)||(10591860-10591921)
chr7 (301-366)||(23620747-23620811)
chr7 (301-366)||(38235857-38235922)
chr7 (301-366)||(43188920-43188985)
chr7 (301-366)||(45510405-45510470)
[»] chr6 (25 HSPs)
chr6 (304-366)||(33590285-33590347)
chr6 (303-374)||(20381821-20381892)
chr6 (304-374)||(19477311-19477381)
chr6 (301-374)||(13120375-13120448)
chr6 (304-373)||(26289607-26289676)
chr6 (301-373)||(15504754-15504826)
chr6 (302-366)||(25072485-25072549)
chr6 (304-367)||(28551851-28551914)
chr6 (301-366)||(2502319-2502384)
chr6 (301-366)||(8439348-8439413)
chr6 (306-375)||(12779567-12779636)
chr6 (301-378)||(34557125-34557202)
chr6 (301-365)||(4089350-4089414)
chr6 (515-575)||(9729814-9729874)
chr6 (301-365)||(31345324-31345388)
chr6 (301-368)||(27793560-27793627)
chr6 (304-375)||(32222056-32222127)
chr6 (303-366)||(33212383-33212446)
chr6 (304-366)||(33755102-33755164)
chr6 (301-366)||(1029356-1029421)
chr6 (301-366)||(4909868-4909933)
chr6 (301-375)||(15615721-15615791)
chr6 (301-366)||(24734943-24735008)
chr6 (301-366)||(26574348-26574413)
chr6 (301-366)||(26683380-26683445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (305-366)||(90842-90903)
[»] chr4 (34 HSPs)
chr4 (301-370)||(21443081-21443150)
chr4 (301-366)||(52430528-52430593)
chr4 (301-365)||(40423026-40423090)
chr4 (301-368)||(32648957-32649024)
chr4 (301-366)||(6836463-6836528)
chr4 (301-366)||(37662706-37662771)
chr4 (301-366)||(49936565-49936630)
chr4 (301-364)||(28880056-28880119)
chr4 (301-368)||(42954669-42954736)
chr4 (304-366)||(368120-368182)
chr4 (301-363)||(48620355-48620417)
chr4 (304-366)||(55509940-55510002)
chr4 (301-366)||(16535754-16535819)
chr4 (301-366)||(27143241-27143306)
chr4 (301-366)||(38366090-38366155)
chr4 (301-366)||(46669898-46669963)
chr4 (301-366)||(52594579-52594644)
chr4 (303-366)||(8827775-8827838)
chr4 (303-368)||(3075721-3075784)
chr4 (304-365)||(32866686-32866748)
chr4 (301-367)||(37756676-37756742)
chr4 (304-366)||(50494610-50494672)
chr4 (301-366)||(3126965-3127030)
chr4 (301-366)||(7182144-7182209)
chr4 (301-366)||(8828163-8828228)
chr4 (301-366)||(13270016-13270081)
chr4 (301-366)||(21730280-21730345)
chr4 (301-366)||(32060709-32060774)
chr4 (301-366)||(38317181-38317246)
chr4 (305-366)||(42650699-42650760)
chr4 (304-365)||(45823609-45823670)
chr4 (301-366)||(47063745-47063810)
chr4 (301-366)||(47669873-47669938)
chr4 (301-366)||(49404576-49404641)
[»] chr1 (34 HSPs)
chr1 (301-374)||(27102777-27102850)
chr1 (301-366)||(43036276-43036341)
chr1 (301-368)||(50402802-50402869)
chr1 (301-370)||(12625776-12625846)
chr1 (301-365)||(25561271-25561335)
chr1 (304-366)||(20712172-20712234)
chr1 (304-366)||(50226093-50226155)
chr1 (301-366)||(2925888-2925953)
chr1 (301-374)||(35619467-35619540)
chr1 (301-373)||(36385394-36385467)
chr1 (304-365)||(39886880-39886941)
chr1 (301-366)||(41432715-41432780)
chr1 (301-366)||(42162006-42162071)
chr1 (303-360)||(42806239-42806296)
chr1 (301-365)||(6538022-6538086)
chr1 (306-366)||(17760443-17760503)
chr1 (304-368)||(32672654-32672718)
chr1 (302-366)||(49102926-49102990)
chr1 (301-364)||(19652248-19652311)
chr1 (301-364)||(24436885-24436948)
chr1 (301-365)||(40243425-40243491)
chr1 (304-366)||(28848755-28848817)
chr1 (304-366)||(33324686-33324748)
chr1 (303-365)||(33854794-33854856)
chr1 (303-365)||(33926066-33926128)
chr1 (304-366)||(36886932-36886994)
chr1 (301-366)||(896448-896513)
chr1 (301-366)||(23871416-23871481)
chr1 (301-366)||(32299165-32299230)
chr1 (301-366)||(33579316-33579381)
chr1 (301-366)||(36325778-36325843)
chr1 (301-366)||(47206377-47206442)
chr1 (301-366)||(47905642-47905707)
chr1 (301-366)||(51246527-51246592)
[»] chr2 (28 HSPs)
chr2 (303-375)||(28539381-28539453)
chr2 (301-366)||(11522133-11522198)
chr2 (301-366)||(13767481-13767546)
chr2 (303-366)||(16625759-16625822)
chr2 (301-373)||(12941750-12941824)
chr2 (304-366)||(39205080-39205142)
chr2 (313-366)||(31082868-31082921)
chr2 (301-366)||(36870306-36870371)
chr2 (301-365)||(9087418-9087482)
chr2 (306-366)||(21626188-21626248)
chr2 (301-368)||(8410883-8410950)
chr2 (304-375)||(35550114-35550185)
chr2 (301-368)||(40357518-40357585)
chr2 (306-365)||(43190507-43190566)
chr2 (301-364)||(44953973-44954036)
chr2 (301-375)||(4666189-4666263)
chr2 (304-366)||(14385143-14385205)
chr2 (301-363)||(31809471-31809533)
chr2 (301-366)||(3119805-3119870)
chr2 (301-366)||(4042027-4042092)
chr2 (301-374)||(8184114-8184187)
chr2 (301-366)||(12963924-12963989)
chr2 (301-366)||(13765892-13765957)
chr2 (301-342)||(26427619-26427660)
chr2 (301-366)||(36567231-36567296)
chr2 (304-365)||(37217019-37217080)
chr2 (301-366)||(44137198-44137263)
chr2 (301-366)||(44656703-44656768)
[»] chr8 (30 HSPs)
chr8 (304-375)||(43239723-43239794)
chr8 (304-366)||(14581714-14581776)
chr8 (304-374)||(41866083-41866153)
chr8 (301-366)||(32216-32281)
chr8 (301-366)||(1839773-1839838)
chr8 (301-366)||(7079947-7080012)
chr8 (301-366)||(27085411-27085476)
chr8 (305-373)||(4873199-4873267)
chr8 (301-365)||(41455323-41455387)
chr8 (307-374)||(13227765-13227832)
chr8 (303-374)||(39193986-39194057)
chr8 (301-371)||(13865045-13865115)
chr8 (304-366)||(29584237-29584299)
chr8 (301-371)||(29612049-29612119)
chr8 (301-366)||(10878735-10878800)
chr8 (301-366)||(16424201-16424266)
chr8 (301-366)||(31297301-31297366)
chr8 (301-366)||(34336093-34336158)
chr8 (302-374)||(35856484-35856556)
chr8 (301-356)||(22330763-22330818)
chr8 (303-366)||(31149965-31150028)
chr8 (304-366)||(12506152-12506214)
chr8 (301-366)||(1942006-1942071)
chr8 (301-366)||(2474720-2474785)
chr8 (301-366)||(3404527-3404592)
chr8 (301-366)||(13258549-13258614)
chr8 (301-366)||(26042255-26042320)
chr8 (301-366)||(32158828-32158893)
chr8 (301-366)||(34272578-34272643)
chr8 (303-375)||(39405113-39405186)
[»] chr3 (42 HSPs)
chr3 (304-362)||(3537273-3537331)
chr3 (301-366)||(39114917-39114982)
chr3 (303-366)||(29623299-29623362)
chr3 (301-375)||(23420755-23420829)
chr3 (301-367)||(27922023-27922089)
chr3 (301-367)||(39966831-39966897)
chr3 (301-367)||(46017267-46017333)
chr3 (301-366)||(47359372-47359438)
chr3 (304-366)||(49183748-49183810)
chr3 (304-373)||(1339855-1339924)
chr3 (301-374)||(13638482-13638554)
chr3 (301-366)||(19148230-19148295)
chr3 (307-364)||(30697429-30697486)
chr3 (301-366)||(35283150-35283215)
chr3 (301-366)||(48444568-48444633)
chr3 (301-366)||(52620788-52620853)
chr3 (301-366)||(53888550-53888615)
chr3 (304-364)||(16883410-16883470)
chr3 (302-378)||(32700374-32700450)
chr3 (301-365)||(40674171-40674235)
chr3 (304-362)||(30996142-30996201)
chr3 (306-357)||(33900673-33900724)
chr3 (301-368)||(44412108-44412175)
chr3 (301-364)||(46891451-46891514)
chr3 (301-364)||(49304273-49304336)
chr3 (304-354)||(19793419-19793469)
chr3 (304-366)||(34729293-34729355)
chr3 (304-374)||(35989161-35989231)
chr3 (304-366)||(37545241-37545303)
chr3 (301-371)||(41961930-41962000)
chr3 (301-366)||(2420722-2420787)
chr3 (301-374)||(15499252-15499325)
chr3 (313-366)||(27055869-27055922)
chr3 (301-366)||(32858893-32858958)
chr3 (301-366)||(39499261-39499326)
chr3 (301-366)||(43007475-43007540)
chr3 (301-366)||(46312373-46312438)
chr3 (301-366)||(47714626-47714691)
chr3 (301-366)||(47789399-47789464)
chr3 (301-366)||(54126323-54126388)
chr3 (301-366)||(54372529-54372594)
chr3 (302-343)||(54877762-54877803)
[»] scaffold0119 (1 HSPs)
scaffold0119 (304-375)||(37175-37246)
[»] scaffold0717 (1 HSPs)
scaffold0717 (301-366)||(1641-1706)
[»] scaffold0248 (1 HSPs)
scaffold0248 (306-366)||(154-214)
[»] scaffold0991 (1 HSPs)
scaffold0991 (304-366)||(3302-3363)
[»] scaffold0051 (4 HSPs)
scaffold0051 (308-366)||(3528-3586)
scaffold0051 (308-366)||(6717-6775)
scaffold0051 (308-366)||(7700-7758)
scaffold0051 (301-366)||(644-709)
[»] scaffold0028 (1 HSPs)
scaffold0028 (301-366)||(35408-35473)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 60 - 374
Target Start/End: Complemental strand, 28521945 - 28521632
Alignment:
Q  60 attagtgttttgggttgaactctcataaactcttgagataaactcaaactttgtagtaaattaaaaagtgcttataataaagagagttgtcttannnnnn 159  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  28521945 attagtgttttgggttgaactctcataaaatcttcagataaactcaaactttgtagtaaattaaaaagtgcttataataaagagagttgtcttatttttt 28521846  T
Q  160 naactcacttttgaaagtgaaaaatgtagaaaaagtttctcactttatttggttagcaactatgtctattttggttgaaaattgaatgaggtgatagatt 259  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28521845 -aactcacttttgaaagtgaaaaatgtagaaaaagtttctcactttatttggttagcaactatgtctattttggttgaaaatcgaatgaggtgatagatt 28521747  T
Q  260 tcattaaaagaatattatgcttccttcattactcaagaaggtaatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcat 359  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  28521746 tcattaaaagaatattatgttttcttcattactcaaaaaggtaatatattttcaattttaagaatgttataataacatagattaaacttcaagaattcat 28521647  T
Q  360 ataaacctttcaaaa 374  Q
    |||||||||| ||||    
T  28521646 ataaaccttttaaaa 28521632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 408 - 682
Target Start/End: Complemental strand, 28521548 - 28521276
Alignment:
Q  408 actttctacttgctcattctttcttatttgaaaatcctatcttctattctcc---aaactcacaagtaaaactttcgaaaagcataaagctaatttaaag 504  Q
    |||||||||||||||  |||||||| ||| ||||| || |||||||||||||   |||||||||||||||||||||||||| |||||||||||     ||    
T  28521548 actttctacttgctccatctttcttgtttcaaaattctctcttctattctcctcgaaactcacaagtaaaactttcgaaaaacataaagctaa-----ag 28521454  T
Q  505 tgtgtatttagattagcttatagaagctcatttccactatccaatgcactttaaacatgaaaattgtgaagttacaattagcagcttgtactttaaacac 604  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||  ||||| |||||||||| |    
T  28521453 tgtgtatttagattagcttatagaagctcatttccactttccaattcactttaaacatgaaaattatgaagttacaattaatagcttctactttaaacgc 28521354  T
Q  605 aagtctcttgccaatttgctgcataaacaaataagctaaaagtttattggttttaatgaacaaaatcgtgctaaactt 682  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28521353 aagtctcttgccaatttgctacataaacaaacaagctaaaagtttgttggttttaatgaacaaaatcgtgctaaactt 28521276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 742 - 912
Target Start/End: Complemental strand, 28521132 - 28520962
Alignment:
Q  742 cgtgttaaaattagttttactacaatcatttctcttaccactaaccaaaggacaattccgttaataaatccttaaacaaggtcaattccgtcaacaaaaa 841  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521132 cgtgttaaaattagttttgctacaatcatttctcttaccactagccaaaggacaattccgttaataaatccttaaacaaggtcaattccgtcaacaaaaa 28521033  T
Q  842 ctcacagaatcaatcacactgaacttcattctttccttccttcatctctcacatcacaccacctttgcttc 912  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521032 ctcacagaatcaatcacactgaacttcattctttccttccttcatctctcacatcacaccacctttgcttc 28520962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 41923282 - 41923209
Alignment:
Q  305 atattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaattct 378  Q
    ||||||| ||| |||||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||||    
T  41923282 atatttttaatcttaaaaatattataacaacatagattaaatttgaagaattcatataaacccttcaaaattct 41923209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 3676471 - 3676542
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||||||||||| ||| |||||  ||||||||||| | |||||||||||||||||||| ||||||||    
T  3676471 tatattttcaattttaagaatattatagcaacatagattaaatttgaagaattcatataaacccttcaaaat 3676542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 2679842 - 2679908
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttc 370  Q
    |||||||| |||||||||||| |||||| ||||||||||| | || |||||||||||||||||||||    
T  2679842 tatatttttaattttaaaaatattataacaacatagattaaatttaaagaattcatataaacctttc 2679908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 9621898 - 9621962
Alignment:
Q  305 atattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaaccttt 369  Q
    ||||||| |||||||||||| |||||| || |||||||| | |||||||||||||||||||||||    
T  9621898 atatttttaattttaaaaatattataacaatatagattaaatttgaagaattcatataaaccttt 9621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 29799765 - 29799701
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||||||| ||||||||||||| |||| | |||||||||| ||||||||    
T  29799765 taatatatttttaattttaaaaatattataataacatatattaaatttgaagaatttatataaac 29799701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 15399943 - 15399877
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    ||||||||||| |||||||||||| |||||| |||| |||||| | || ||||||||||||||||||    
T  15399943 taatatatttttaattttaaaaatattataacaacaaagattaaatttaaagaattcatataaacct 15399877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 17668087 - 17668161
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||||||||||||||||| ||| ||||||  |||||||||| | ||||||||||||| |||||| | ||||||    
T  17668087 taatatattttcaattttaagaatattataactacatagattaaatttgaagaattcatgtaaaccctccaaaat 17668161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 18675679 - 18675741
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||||||||||||||| | | ||||||||||||||||||    
T  18675679 tatatttttaattttaaaaataatataataacatagattaaattcgaagaattcatataaacc 18675741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 19389781 - 19389855
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| | ||||||||||||| |||||| | ||||||    
T  19389781 taatatatttttaattttaaaaatattataactacatagattaaatttgaagaattcatgtaaaccctccaaaat 19389855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 13293937 - 13294002
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||  ||||||||||| |||||| |||| |||||| ||||||||||| ||||||||||    
T  13293937 taatatattttttattttaaaaatattataacaacagagattaaacttgaagaatacatataaacc 13294002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 35708715 - 35708782
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    |||||||||||  |||||||||||  ||||| |||||| |||| | ||||||||||||||||||||||    
T  35708715 taatatatttttcattttaaaaataatataacaacatatattaaatttgaagaattcatataaacctt 35708782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 38302311 - 38302381
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttca 371  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||| |||||||||||||| ||||    
T  38302311 taatatacttttaattttaagaatattataataacatagattgaatttgaaaaattcatataaacccttca 38302381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 43496837 - 43496899
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||  ||||||||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  43496837 tatattttttattttaaaaatattataacaacataaattaaatttgaagaattcatataaacc 43496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 1658305 - 1658240
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||| ||||||||||||||    
T  1658305 taatatacttttaattttaagaatattataataacatagattgaatttgaaaaattcatataaacc 1658240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 1935060 - 1935125
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | |||||||||||| |||||||    
T  1935060 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcacataaacc 1935125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 3081285 - 3081350
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | || |||||||||||||||||    
T  3081285 taatatatttttaattttaagaatattataagaacatatattaaatttaaagaattcatataaacc 3081350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 4841662 - 4841727
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||  | ||||||||||||||||||||    
T  4841662 taatatatttttaattttaagaatattataacaacatatattcaatttgaagaattcatataaacc 4841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 6491312 - 6491247
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||  ||| | ||||||||||||||||||||    
T  6491312 taatatatttttaattttaagaatattataacaacataagttaaatttgaagaattcatataaacc 6491247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 37508343 - 37508408
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  37508343 taatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaattcatataaacc 37508408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 12063939 - 12063999
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatat 361  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| | ||||| |||||||||    
T  12063939 taatatatttttaattttaaaaatattataacaacatatattaaatttgaataattcatat 12063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 344162 - 344090
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||| |||||| |||||||| |||||||||| ||||||  ||| | || |||||||||||||||| |||||||||    
T  344162 taatgtatttttaattttaagaatgttataaaaacata--ttaaatttaaagaattcatataaacatttcaaaat 344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 6632773 - 6632712
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||| ||| ||||||||||||| |||| | ||||| ||||||||||||||    
T  6632773 tatatttttaattttaagaatattataataacatatatta-atttgaataattcatataaacc 6632712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 8944170 - 8944100
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    |||||||| |||||| |||||  ||||| |||||| |||| | |||||||||||||||| ||||| |||||    
T  8944170 tatatttttaatttttaaaataatataacaacatatattaaatttgaagaattcatatacaccttccaaaa 8944100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 12097031 - 12096973
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcat 359  Q
    ||||||||||| |||||||| ||| ||||||||| |||||||  | |||||||||||||    
T  12097031 taatatattttaaattttaagaatattataataatatagattgaatttgaagaattcat 12096973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 14570006 - 14570068
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||| || ||||||||||||  ||||| ||| ||||||| | ||||||||||||||||||||    
T  14570006 tatatatttaattttaaaaataatataacaacttagattaaatttgaagaattcatataaacc 14570068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 15974465 - 15974403
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | || |||||||| ||||||||    
T  15974465 tatatttttaattttaaaaataatataacaacatagattaaatttaaagaattcgtataaacc 15974403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 38568334 - 38568395
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||   ||||| ||||||||||| | ||||||||||||||||||||    
T  38568334 tatatttt-aattttaaaaacaatataacaacatagattaaatttgaagaattcatataaacc 38568395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 9684744 - 9684809
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||  || ||||||| | ||||||||||||| ||||||    
T  9684744 taatatatttttaattttaagaatattataactacttagattagatttgaagaattcatgtaaacc 9684809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 10295611 - 10295546
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  10295611 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 10295546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 15917011 - 15916946
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | || |||||||| ||||||||    
T  15917011 taatatattttaaattttaagaatattataacaacatatattaaatttaaagaattcgtataaacc 15916946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 17093025 - 17092960
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  17093025 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 17092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 18671132 - 18671075
Alignment:
Q  309 tttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||||||||  ||||| ||||| ||||| | |||||||||||| |||||||    
T  18671132 tttcaattttaaaaataatataacaacattgattaaatttgaagaattcacataaacc 18671075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 27480125 - 27480190
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  27480125 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 27480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 33682500 - 33682435
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||| | ||| ||||| | || ||||||| | ||||||||||||||||||||    
T  33682500 taatatattttaaatttttagaatattatatttacgtagattaaatttgaagaattcatataaacc 33682435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 35683431 - 35683500
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||| |||||||||||| |||||| |||||| |||| | ||||||||||| ||| |||| | ||||||    
T  35683431 tatttttaattttaaaaatattataacaacataaattaaatttgaagaattcttattaaccctccaaaat 35683500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 574
Target Start/End: Complemental strand, 37894513 - 37894444
Alignment:
Q  505 tgtgtatttagattagcttatagaagctcatttccactatccaatgcactttaaacatgaaaattgtgaa 574  Q
    ||||| ||| |||||| || | || |||||||||||||  |||||||||||||||| |||||||| ||||    
T  37894513 tgtgtgtttggattagtttttggaggctcatttccacttcccaatgcactttaaacgtgaaaattatgaa 37894444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 12215 - 12277
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||    
T  12215 tatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaacc 12277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 38505300 - 38505362
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||    
T  38505300 tatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaacc 38505362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 41471567 - 41471493
Alignment:
Q  300 gtaatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    |||||||||||| |||||||||||| ||| || ||||||||||| | ||||||||||| |||||||||| |||||    
T  41471567 gtaatatatttttaattttaaaaatattaaaacaacatagattaaatttgaagaattcgtataaaccttccaaaa 41471493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 14676358 - 14676284
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||||||||||||||||| ||| ||||||  |||||||||| | ||||||||||||| |||||| | ||||||    
T  14676358 taatatattttcaattttaagaatattataactacatagattaaatttgaagaattcatgtaaaccctccaaaat 14676284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 43348195 - 43348257
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| ||||||||||| | ||||||||||||||| ||||    
T  43348195 tatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatattaacc 43348257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 1278066 - 1278001
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||||||||||||||||||    
T  1278066 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataaacc 1278001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 33187800 - 33187865
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| || ||| |||||| ||||||||||||||||||||    
T  33187800 taatatatttttaattttaagaatattataacaatatatattatatttgaagaattcatataaacc 33187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 38138059 - 38137992
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||| ||||| ||||| |||||| |||||| ||||||||||| | |||||||||||||||| |||||    
T  38138059 taatacatttttaatttcaaaaatattataacaacatagattaaatttgaagaattcatatagacctt 38137992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 46449300 - 46449233
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||| ||||||||||||||||    
T  46449300 taatatacttttaattttaagaatattataataacatagattgaatttgaaaaattcatataaacctt 46449233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 47275955 - 47276022
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||| ||||||||||||||||    
T  47275955 taatatacttttaattttaagaatattataataacatagattggatttgaaaaattcatataaacctt 47276022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 13044272 - 13044210
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| |||||| |||| | ||||||||||||||||||||    
T  13044272 tatatttttaattttaaaaataatataacaacatatattaaatttgaagaattcatataaacc 13044210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 17818411 - 17818349
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | ||||||||||||| ||||||    
T  17818411 tatatttttaattttaaaaatactataacaacatagattaaatttgaagaattcatctaaacc 17818349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 33872076 - 33872138
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||| ||||||  ||||| ||||||||||| | ||||||||||||||||||||    
T  33872076 tatatttttaatttaaaaaataatataacaacatagattaaatttgaagaattcatataaacc 33872138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 35264848 - 35264910
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| |||||| |||| | ||||| ||||||||||||||    
T  35264848 tatatttttaattttaaaaatattataacaacataaattaaatttgaaaaattcatataaacc 35264910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 38991426 - 38991500
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||||||||  ||||||| ||| ||||||||||||| |||| | ||||| |||||||||||| | ||||||||    
T  38991426 taatatattttttattttaagaatattataataacatatattaaatttgaataattcatataaatcattcaaaat 38991500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 42266963 - 42267025
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||| ||| |||||| ||||||||||| | |||||| |||||||||||||    
T  42266963 tatatttttaattttaagaatattataacaacatagattaaatttgaagcattcatataaacc 42267025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 43741820 - 43741758
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| ||||||| ||||| |||| | |||||||||||||| |||||    
T  43741820 tatatttttaattttaaaaatattataattacataaattaaatttgaagaattcatacaaacc 43741758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 21687561 - 21687496
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| ||| || |||| | |||||||||| |||||||||    
T  21687561 taatatatttttaattttaaaaatattataacaacttatattaaatttgaagaatttatataaacc 21687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 25335435 - 25335370
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| || |||||||| | ||||| ||||||||||||||    
T  25335435 taatatatttttaattttaagaattttataacaaaatagattaaatttgaaaaattcatataaacc 25335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 38233691 - 38233752
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||| ||| |||||||| |||||||||||| || || | ||||||||||||||||||    
T  38233691 atatatttttaatattaaaaatattataataacatggaataaaattgaagaattcatataaa 38233752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 41002204 - 41002269
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  41002204 taatatatttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 41002269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 43665122 - 43665187
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  43665122 taatatatttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 43665187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 314 - 366
Target Start/End: Complemental strand, 30081087 - 30081035
Alignment:
Q  314 attttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||| ||||||||||| |  |||||||||||||||||||    
T  30081087 attttaaaaatattataacaacatagattaaatctgaagaattcatataaacc 30081035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 31891403 - 31891340
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| ||||| || ||| |||||| ||||||||||| | |||||||||||||||||||    
T  31891403 taatatatttttaattt-aagaatattataacaacatagattaaatttgaagaattcatataaac 31891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 2826203 - 2826274
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||  |||||||||||  ||||| ||||| ||||| | |||||||||||||||||| ||| ||||||    
T  2826203 tatatttttcattttaaaaataatataacaacattgattaaatttgaagaattcatataaagcttccaaaat 2826274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 4787956 - 4788014
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcat 359  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| | ||||| |||||||    
T  4787956 taatatatttttaattttaaaaatattataacaacatatattaaaattgaaaaattcat 4788014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 4126086 - 4126025
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||| ||||||||||||  ||||| ||| ||||||| | ||||| |||||||||||||    
T  4126086 tatatttttaattttaaaaataatataacaacgtagattaaatttgaataattcatataaac 4126025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 5968006 - 5968071
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  5968006 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 5968071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 10591860 - 10591921
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||| |||||||||| | |  ||| ||||||||||| | |||||||||||||||||||    
T  10591860 tatatttttaattttaaaattatagtaacaacatagattaaatttgaagaattcatataaac 10591921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 23620747 - 23620811
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  23620747 taatatatttt-aattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 23620811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 38235922 - 38235857
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||| || |||||||  | ||||| ||||||||||||||    
T  38235922 taatatacttttaattttaaaaatattataacaatatagattgaatttgaaaaattcatataaacc 38235857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 43188985 - 43188920
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  43188985 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 43188920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 45510470 - 45510405
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| ||||||  || ||||||| | ||||||||||| | ||||||    
T  45510470 taatatattttaaattttaaaaatattataactacttagattaaatttgaagaattcgtctaaacc 45510405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 33590285 - 33590347
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||| ||||    
T  33590285 tatatttttaattttaaaaatattataataacatagattaaatttgaagaattcatattaacc 33590347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 20381821 - 20381892
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||| |||||||| ||| |||||| |||||| |||| | |||||||||||||||||||| |||||||    
T  20381821 atatatttttaattttaagaatattataacaacatatattaaaattgaagaattcatataaacccttcaaaa 20381892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 19477381 - 19477311
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||| || |||||||||||| |||||| ||||||||||| | |||||||||||||||||| ||| |||||    
T  19477381 tatatatttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaatcttccaaaa 19477311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 13120375 - 13120448
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||||||||||| |||||| |||||||    
T  13120375 taatatatttttaattttaacaatattataacaacatagattgaatttgaagaattcatgtaaaccgttcaaaa 13120448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 26289676 - 26289607
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaa 373  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | |||||||||||||||||| | ||||||    
T  26289676 tatatttttaattttaaaaataatataacaacatagattaaatttgaagaattcatataaatccttcaaa 26289607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 15504754 - 15504826
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaa 373  Q
    ||||||||||| |||||||| ||||||||||   | ||||||| | ||||||||||||| |||||||||||||    
T  15504754 taatatatttttaattttaagaatgttataactccttagattaaatttgaagaattcatgtaaacctttcaaa 15504826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 25072485 - 25072549
Alignment:
Q  302 aatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| ||| |||||||| ||| |||||||||||||||||| | ||||||||||| ||||||||    
T  25072485 aatatacttttaattttaagaatattataataacatagattaaatttgaagaattcgtataaacc 25072549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 28551851 - 28551914
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    |||||| | |||||||||||| |||||| |||||| |||| | |||||||||||||||||||||    
T  28551851 tatattgttaattttaaaaatattataacaacataaattaaatttgaagaattcatataaacct 28551914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 2502319 - 2502384
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| || ||| |||| | ||||||||||||||||||||    
T  2502319 taatatatttttaattttaagaatattataacaatatatattaaatttgaagaattcatataaacc 2502384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 8439348 - 8439413
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||| | |||||||| | |||||||||    
T  8439348 taatatatttttaattttaacaatattataaaaacatagattaaatttgaagaaataatataaacc 8439413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 12779636 - 12779567
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||| |||||||||||| |||||| ||||||||||| | ||||||||||| ||| |||| | ||||||    
T  12779636 tatttttaattttaaaaatattataacaacatagattaaatttgaagaattcttattaaccctccaaaat 12779567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 34557125 - 34557202
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaattct 378  Q
    ||||||||||| || ||||||||| ||||||  |||| ||||| | ||||||||||||| |||||  |||||||||||    
T  34557125 taatatatttttaactttaaaaatattataaatacattgattaaatttgaagaattcatgtaaacgcttcaaaattct 34557202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 4089350 - 4089414
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||||||||||||||||||| |||| | |||||| |||| | |||||||| || |||||||    
T  4089350 taatatattttcaattttaaaaatattatgacaacatatattaaatttgaagaaatcgtataaac 4089414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 9729874 - 9729814
Alignment:
Q  515 gattagcttatagaagctcatttccactatccaatgcactttaaacatgaaaattgtgaag 575  Q
    ||||||||| | || |||||| ||||||  |||||||||||||||| ||||||||||||||    
T  9729874 gattagcttttggaggctcatctccacttcccaatgcactttaaacgtgaaaattgtgaag 9729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 31345324 - 31345388
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||| | ||||| |||||||||||||    
T  31345324 taatatacttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaac 31345388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 27793560 - 27793627
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||||||| |||||||| ||| || ||| ||||||| ||||| ||||| |||||||| |||||||    
T  27793560 taatatatttttaattttaagaatattttaacaacataggttatatttgaaaaattcatacaaacctt 27793627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 32222127 - 32222056
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||  ||||||| |||||||||  ||||||| ||| | |||||||||||||||||||| | ||||||    
T  32222127 tatattttttattttaagaatgttatagcaacatagtttaaatttgaagaattcatataaaccctccaaaat 32222056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 33212446 - 33212383
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||| |||||||| ||| |||||| |||||  |||| | ||||||||||||||||||||    
T  33212446 atatatttttaattttaagaatattataacaacatgtattaaatttgaagaattcatataaacc 33212383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 33755164 - 33755102
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| |||||||||||   ||||| ||||||||||||||    
T  33755164 tatattttaaattttaaaaataatataacaacatagattaattttgaataattcatataaacc 33755102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 1029421 - 1029356
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  1029421 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 1029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 4909868 - 4909933
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  | ||||| |||| |||||||||    
T  4909868 taatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaattgatataaacc 4909933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 15615791 - 15615721
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||||| ||||||||||    ||| |||||| |||||| | |||||||||||||||||||| | ||||||    
T  15615791 taatatatttttaattttaaaa----tattataacaaagattaaatttgaagaattcatataaaccctccaaaat 15615721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 24735008 - 24734943
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  24735008 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 24734943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 26574348 - 26574413
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  26574348 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 26574413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 26683445 - 26683380
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||| | ||| |||| | ||||||||||||| ||||||    
T  26683445 taatatatttttaattttaagaattttataattatataaattaaatttgaagaattcatgtaaacc 26683380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 90842 - 90903
Alignment:
Q  305 atattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| |||||||||||| |||||| ||||||||||| | ||||||||||||||||||||    
T  90842 atatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaacc 90903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 21443150 - 21443081
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttc 370  Q
    ||||||||||| |||||| ||||| ||||||||| ||| |||| | ||||||||||||||||||||||||    
T  21443150 taatatatttttaatttttaaaatattataataatatatattaaatttgaagaattcatataaacctttc 21443081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 52430528 - 52430593
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  52430528 taatatatttttaattttaaaaatattataacaacatatattaaatttgaagaattcatataaacc 52430593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 40423026 - 40423090
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||| | |||||||||||||||||||    
T  40423026 taatatatttttaattttaagaatattataacaacatagattaaatttgaagaattcatataaac 40423090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 32648957 - 32649024
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||| | ||||| ||||||||||||||||    
T  32648957 taatatatttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaacctt 32649024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 6836528 - 6836463
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| || |||||||| ||||||| ||||||||||||||    
T  6836528 taatatatttttaattttaagaattttataacaagatagattaaacttgaaaaattcatataaacc 6836463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 37662771 - 37662706
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| | ||||||||||||| ||||||    
T  37662771 taatatatttttaattttaaaaatattataagaacatatattaaatttgaagaattcatctaaacc 37662706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 49936630 - 49936565
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||||||||||||||||||    
T  49936630 taatatatttttaattttaagaatattataacaacatagattgaatttgaagaattcatataaacc 49936565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 28880119 - 28880056
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||||||||||||||||    
T  28880119 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataaa 28880056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 42954736 - 42954669
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    |||||||||||  ||||||| ||| ||||||||||||| |||| | |||||||||||| |||||||||    
T  42954736 taatatatttttgattttaagaatattataataacatacattaaatttgaagaattcacataaacctt 42954669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 368182 - 368120
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| |||||| |||| | ||||||||||||||| ||||    
T  368182 tatatttttaattttaaaaatattataacaacataaattaaatttgaagaattcatatgaacc 368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 48620417 - 48620355
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataa 363  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | |||||||||||||||||    
T  48620417 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataa 48620355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 55510002 - 55509940
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||  ||||||||||| |||||  ||||||||||| | ||||||||||||||||||||    
T  55510002 tatattttttattttaaaaatattatagcaacatagattaaatttgaagaattcatataaacc 55509940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 16535819 - 16535754
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| |||| |||||||| ||| |||||| ||||||||||| | ||||| ||||||||||||||    
T  16535819 taatatctttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaacc 16535754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 27143306 - 27143241
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| || ||| |||| | ||||||||||||||||||||    
T  27143306 taatatatttttaattttaagaatattataacaatatatattaaatttgaagaattcatataaacc 27143241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 38366155 - 38366090
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||  ||||||||||  | ||||| ||||||||||||||    
T  38366155 taatatatttttaattttaaaaatattatagcaacatagattgaatttgaaaaattcatataaacc 38366090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 46669898 - 46669963
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | || |||||||||||||||||    
T  46669898 taatatatttttaattttaagaatattataacaacatatattaaatttaaagaattcatataaacc 46669963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 52594579 - 52594644
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||| | ||||| ||||||||||||||    
T  52594579 taatatacttttaattttaagaatattataacaacatagattagatttgaaaaattcatataaacc 52594644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 8827775 - 8827838
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||| ||| |||| ||| |||||| ||||||||||| | |||||||||| |||||||||    
T  8827775 atatatttttaatattaagaatattataacaacatagattaaatttgaagaattgatataaacc 8827838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 368
Target Start/End: Original strand, 3075721 - 3075784
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||||| |||||||||||| | |||| ||||||  ||| | ||||||||||||||||||||||    
T  3075721 atatatttttaattttaaaaatatgataacaacata--ttaaatttgaagaattcatataaacctt 3075784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 32866686 - 32866748
Alignment:
Q  304 tatattttcaattttaaaaa-tgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||| ||||||||||| | |||| ||||||||||||| | ||||| |||||||||||||    
T  32866686 tatatttttaattttaaaaaatattatcataacatagattaaatttgaataattcatataaac 32866748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 37756676 - 37756742
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| |||||||||||||||    
T  37756676 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacct 37756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 50494610 - 50494672
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||| | |||||  |||||| |||| | ||||||||||||||||||||    
T  50494610 tatatttttaattttaaaagtattatatcaacataaattaaatttgaagaattcatataaacc 50494672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 3126965 - 3127030
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  3126965 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 3127030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 7182144 - 7182209
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  7182144 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 7182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 8828163 - 8828228
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||  | ||||||||| |||||| |||| |||||| | || |||||||||||||||||    
T  8828163 taatatattttttaatttaaaaatattataacaacaaagattaaatttaaagaattcatataaacc 8828228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 13270081 - 13270016
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  13270081 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 13270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 21730280 - 21730345
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| ||||| || ||| |||||| ||||||||||  | || |||||||||||||||||    
T  21730280 taatatatttttaatttcaagaatattataacaacatagattggatttaaagaattcatataaacc 21730345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 32060774 - 32060709
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  32060774 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 32060709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 38317181 - 38317246
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  38317181 taatatacttttaattttaagaatattataacaacatagattggatttgaaaaattcatataaacc 38317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 42650760 - 42650699
Alignment:
Q  305 atattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| |||||||| ||| ||||||  ||||| |||| | ||||||||||||||||||||    
T  42650760 atatttttaattttaagaatattataacgacataaattaaatttgaagaattcatataaacc 42650699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 45823670 - 45823609
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||| || |||||||||||| | |||| |||||| |||| | |||||||||||||||||||    
T  45823670 tatatatttaattttaaaaatttaataacaacataaattaaatttgaagaattcatataaac 45823609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 47063810 - 47063745
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| | |||| |||||| |||| | |||||||||||| |||||||    
T  47063810 taatatatttttaattttaagaatataataacaacatatattaaatttgaagaattcacataaacc 47063745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 47669938 - 47669873
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  47669938 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 47669873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 49404576 - 49404641
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  49404576 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 49404641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 27102777 - 27102850
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||||| || ||||||||| |||||| || | |||||| | ||||||||||||||||||||||||||||    
T  27102777 taatatatttttaaatttaaaaatattataacaataaagattaaatttgaagaattcatataaacctttcaaaa 27102850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 43036276 - 43036341
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||| | ||||||||||||||||||||    
T  43036276 taatatatttttaattttaagaatattataacaacatagattaaatttgaagaattcatataaacc 43036341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 50402869 - 50402802
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||||||| |||||||||||| |||||| ||||||||||  | ||||| ||||||||||||||||    
T  50402869 taatatatttttaattttaaaaatattataacaacatagattggatttgaaaaattcatataaacctt 50402802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 12625776 - 12625846
Alignment:
Q  301 taatatattttcaattttaa-aaatgttataataacatagattatacttgaagaattcatataaacctttc 370  Q
    ||||||||||| |||||||| |||||||||||||||||| |||| | | ||| ||||||||||||||||||    
T  12625776 taatatattttaaattttaagaaatgttataataacatacattaaattcgaataattcatataaacctttc 12625846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 25561271 - 25561335
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| |||  |||||||||||| |||| | |||||||||||||||||||    
T  25561271 taatatatttttaattttaagaataatataataacatatattaaatttgaagaattcatataaac 25561335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 20712172 - 20712234
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| |||||| ||||||||||  | |||||||||| |||||||||    
T  20712172 tatatttttaattttaaaaatattataacaacatagattgaatttgaagaatttatataaacc 20712234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 50226155 - 50226093
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | | ||||||||||||||||||    
T  50226155 tatatttttaattttaaaaataatataacaacatagattaaattagaagaattcatataaacc 50226093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 2925888 - 2925953
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||| | ||||| ||||||||||||||    
T  2925888 taatatacttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaacc 2925953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 35619467 - 35619540
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||| ||| |||||||| ||| |||||| |||||| |||| | |||||||||||||| ||||| |||||||    
T  35619467 taatatacttttaattttaagaatattataacaacatatattaaatttgaagaattcatacaaacccttcaaaa 35619540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 36385467 - 36385394
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac-ctttcaaa 373  Q
    ||||| ||||| |||||||||||| |||||| |||||| |||| | || |||||||||||||||| ||||||||    
T  36385467 taatacatttttaattttaaaaatattataacaacataaattaaatttaaagaattcatataaactctttcaaa 36385394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 39886880 - 39886941
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||| | ||||||||||  ||||| ||||||||||| | |||||||||||||||||||    
T  39886880 tatatttttagttttaaaaataatataacaacatagattaaatttgaagaattcatataaac 39886941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 41432715 - 41432780
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||  |||||||||| | ||||||||||||| ||||||    
T  41432715 taatatatttttaattttaagaatattataactacatagattaaatttgaagaattcatgtaaacc 41432780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 42162006 - 42162071
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  42162006 taatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaattcatataaacc 42162071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 42806296 - 42806239
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcata 360  Q
    |||||||||  ||||||||||| |||||| ||||||||||| | ||||||||||||||    
T  42806296 atatattttttattttaaaaatattataacaacatagattaaatttgaagaattcata 42806239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 6538086 - 6538022
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||||| |||||||||||    
T  6538086 taatatatttttaattttaagaatattataacaacatatattaaatttgaagagttcatataaac 6538022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 17760443 - 17760503
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| |||||||||||| |||||| ||||||||||| | ||||||||||| ||| ||||    
T  17760443 tatttttaattttaaaaatattataacaacatagattaaatttgaagaattcttattaacc 17760503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 32672718 - 32672654
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    |||||||| ||||||||||||  || || ||||||||||| |  |||||||||||||||||||||    
T  32672718 tatatttttaattttaaaaataatacaacaacatagattaaatatgaagaattcatataaacctt 32672654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 49102926 - 49102990
Alignment:
Q  302 aatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||| |||||||| ||| |||||  |||||| |||| | ||||||||||||||||||||    
T  49102926 aatatatttttaattttaagaatattatagcaacatatattaaatttgaagaattcatataaacc 49102990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 19652248 - 19652311
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||| ||| |||||| || |||||||| |  |||||||||||||||||    
T  19652248 taatatatttttaattttaagaatattataacaaaatagattaaatatgaagaattcatataaa 19652311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 24436885 - 24436948
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||||| | |||||| ||||||||||| | ||||| || |||||||||    
T  24436885 taatatatttttaattttaaaagtattataacaacatagattaaatttgaataaatcatataaa 24436948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 40243491 - 40243425
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattata--cttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||||| |||||||||||||   |||||||||| ||||||||    
T  40243491 taatatatttttaattttaagaatattataacaacatagattatatttttgaagaatttatataaac 40243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 28848755 - 28848817
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| ||||||  || ||||||| | ||||||||||||| ||||||    
T  28848755 tatatttttaattttaaaaatattataactacttagattaaatttgaagaattcatgtaaacc 28848817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 33324748 - 33324686
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||| ||| ||||||||||||  ||||| ||||| ||||| | ||||||||||||||||||||    
T  33324748 tataattttaattttaaaaataatataacaacattgattaaatttgaagaattcatataaacc 33324686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 33854794 - 33854856
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||| ||| |||||||| | |||| ||||||||||| | ||||| |||||||||||||    
T  33854794 atatatttttaatattaaaaatatcataacaacatagattaaatttgaaaaattcatataaac 33854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 33926128 - 33926066
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||| ||| |||||||| | |||| ||||||||||| | ||||| |||||||||||||    
T  33926128 atatatttttaatattaaaaatatcataacaacatagattaaatttgaaaaattcatataaac 33926066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 36886994 - 36886932
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||   ||||| ||||||||||| | ||||| ||||||||||||||    
T  36886994 tatatttttaattttaaaaacaatataacaacatagattaaatttgaaaaattcatataaacc 36886932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 896448 - 896513
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  896448 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 23871416 - 23871481
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  23871416 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 23871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 32299230 - 32299165
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  32299230 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 32299165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 33579381 - 33579316
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||| |  ||||||| | ||||||||||||| ||||||    
T  33579381 taatatatttttaattttaagaatattataattatttagattaaatttgaagaattcatgtaaacc 33579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 36325843 - 36325778
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| || ||| ||||||||||  | ||||||||||||||||||||    
T  36325843 taatataattttaattttaataatattttaacaacatagattgaatttgaagaattcatataaacc 36325778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 47206377 - 47206442
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  47206377 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 47206442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 47905642 - 47905707
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  47905642 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 47905707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 51246527 - 51246592
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||| || |||||||  | ||||| ||||||||||||||    
T  51246527 taatatacttttaattttaaaaattttataacaaaatagattgaatttgaaaaattcatataaacc 51246592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 28539381 - 28539453
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||| ||||||||||||  ||||| ||||||||||| | |||||||||||||||||||| | ||||||    
T  28539381 atatatttttaattttaaaaataatataacaacatagattaaatttgaagaattcatataaaccctccaaaat 28539453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 11522133 - 11522198
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||||||||||||||||||    
T  11522133 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataaacc 11522198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 13767546 - 13767481
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  13767546 taatatatttttaattttaaaaatattataacaacatagattgaatttgaaaaattcatataaacc 13767481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 16625759 - 16625822
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||| ||| |||| ||| |||||| ||||||||||| | ||||||||||||||||||||    
T  16625759 atatatttttaatattaagaatattataacaacatagattaaatttgaagaattcatataaacc 16625822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 12941750 - 12941824
Alignment:
Q  301 taatatattttcaattttaaaaatgttataa-taacatagattatacttgaagaattcatataaac-ctttcaaa 373  Q
    ||||||||||| |||||||||||| ||||||  |||||| |||| | ||||||||||||||||||| ||||||||    
T  12941750 taatatatttttaattttaaaaatattataacaaacatatattaaatttgaagaattcatataaactctttcaaa 12941824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 39205142 - 39205080
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | || |||||||||||||||||    
T  39205142 tatatttttaattttaaaaataatataacaacatagattaaatttcaagaattcatataaacc 39205080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 31082921 - 31082868
Alignment:
Q  313 aattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  31082921 aattttaaaaatattataacaacataaattaaatttgaagaattcatataaacc 31082868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 36870371 - 36870306
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||| || |||| | ||||||||||||||||||||    
T  36870371 taatatatttttaattttaagaatattataacaacgtatattaaaattgaagaattcatataaacc 36870306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 9087418 - 9087482
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||| | |||||| |||| | |||||||||||||||||||    
T  9087418 taatatatttttaattttaataatattatgacaacatatattaaatttgaagaattcatataaac 9087482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 21626248 - 21626188
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| |||||||||||| |||||| ||||||||||| | ||||||||||| ||| ||||    
T  21626248 tatttttaattttaaaaatattataacaacatagattaaatttgaagaattcttattaacc 21626188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 8410883 - 8410950
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||||    
T  8410883 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacctt 8410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 35550114 - 35550185
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||  |||||||||||  ||||| ||| ||||||| | |||||||||||||||||||| | ||||||    
T  35550114 tatattttttattttaaaaataatataacaacgtagattaaatttgaagaattcatataaaccctccaaaat 35550185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 40357585 - 40357518
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||||    
T  40357585 taatataattttaattttaagaatattataacaacatagattggatttgaaaaattcatataaacctt 40357518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 365
Target Start/End: Original strand, 43190507 - 43190566
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||| |||||||| ||| |||||| ||||||||||| | |||||||||||||| ||||    
T  43190507 tatttttaattttaagaatattataacaacatagattaaatttgaagaattcatacaaac 43190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 44953973 - 44954036
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||| | || ||||| |||||||||    
T  44953973 taatatatttttaattttaagaatattataataacatatattaaatttaaagaactcatataaa 44954036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 4666263 - 4666189
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||||| |||||||| ||| |||||| || ||| |||| | ||||| ||||||||| |||||| ||||||    
T  4666263 taatatattttaaattttaagaatattataacaagatatattaaatttgaaaaattcatattaaccttccaaaat 4666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 14385205 - 14385143
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||||| ||||||  |||||||||| | ||||||| ||||| ||||||    
T  14385205 tatatttttaattttaaaaatattataactacatagattaaatttgaagatttcatgtaaacc 14385143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 31809533 - 31809471
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataa 363  Q
    |||||||||||  ||||||||||| |||||| |||||||||||   |||||||||| ||||||    
T  31809533 taatatattttttattttaaaaatattataacaacatagattaattttgaagaattaatataa 31809471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 3119805 - 3119870
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  3119805 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 3119870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 4042092 - 4042027
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  4042092 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 4042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 8184114 - 8184187
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||||| ||||| |||||| ||||||  |||||||||| |  |||||||||||| |||| ||| |||||    
T  8184114 taatatatttttaatttaaaaaatattataagtacatagattaaatctgaagaattcatgtaaatcttccaaaa 8184187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 12963924 - 12963989
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  12963924 taatatacttttaattttaagaatattataaaaacatagattggatttgaaaaattcatataaacc 12963989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 13765892 - 13765957
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  13765892 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 13765957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 26427660 - 26427619
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagatt 342  Q
    ||||||||||| |||||||||||| ||| |||||||||||||    
T  26427660 taatatatttttaattttaaaaatattaaaataacatagatt 26427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 36567231 - 36567296
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  36567231 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 36567296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 37217080 - 37217019
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    |||||||| |||||||| ||| |||||  | ||||||||| | |||||||||||||||||||    
T  37217080 tatatttttaattttaagaatattatagcagcatagattaaatttgaagaattcatataaac 37217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 44137263 - 44137198
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  44137263 taatatacttttaattttaagaatattataagaacatagattgaatttgaaaaattcatataaacc 44137198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 44656703 - 44656768
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||| |||||| |||||||    
T  44656703 taatatatttttaattttaagaatattataacaacatatattaaatttgaacaattcacataaacc 44656768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 43239794 - 43239723
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||  ||||||||||| |||||  ||||||||||| | |||||||||||||||||||| ||||||||    
T  43239794 tatattttttattttaaaaatattatatcaacatagattaaatttgaagaattcatataaacccttcaaaat 43239723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 14581714 - 14581776
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||||||||||||||| | ||||||||||| ||||||||    
T  14581714 tatatttttaattttaaaaataatataataacatagattaaaattgaagaattcttataaacc 14581776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 374
Target Start/End: Original strand, 41866083 - 41866153
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    |||||||| ||||||||||||  ||||| ||||||||||| | |||||||||| ||||||||| |||||||    
T  41866083 tatatttttaattttaaaaataatataacaacatagattaaatttgaagaatttatataaacccttcaaaa 41866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 32281 - 32216
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||||||||||||||||||    
T  32281 taatatatttttaattttaagaatattataacaacataaattacatttgaagaattcatataaacc 32216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 1839773 - 1839838
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| || |||||||||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  1839773 taatatatgtttaattttaaaaatattataacaacatatattaaatttgaagaattcatataaacc 1839838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 7079947 - 7080012
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| |||||||| || | |||||||||||||| |||||    
T  7079947 taatatatttttaattttaaaaatattataacaacatagactaaatttgaagaattcatacaaacc 7080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 27085476 - 27085411
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| ||||| |||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  27085476 taatatatttttaatttaaaaaatattataacaacatatattaaatttgaagaattcatataaacc 27085411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 4873199 - 4873267
Alignment:
Q  305 atattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaa 373  Q
    ||||||| |||||||||||| |||||| |||| |||||| | ||||| |||||||||||||| ||||||    
T  4873199 atatttttaattttaaaaatattataacaacacagattaaatttgaaaaattcatataaacccttcaaa 4873267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 41455387 - 41455323
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | |||||||||||||||||||    
T  41455387 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaattcatataaac 41455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 13227832 - 13227765
Alignment:
Q  307 attttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||| |||||||||||| |||||| |||||| |||| | ||||| |||||||||||||| |||||||    
T  13227832 atttttaattttaaaaatattataacaacataaattaaatttgaataattcatataaacccttcaaaa 13227765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 39194057 - 39193986
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||| ||| |||| ||| |||||| |||||||| || | |||||||||||||||||||| |||||||    
T  39194057 atatatttttaatattaagaatattataacaacatagaataaatttgaagaattcatataaacccttcaaaa 39193986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 13865045 - 13865115
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttca 371  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||| | ||||| |||||||||||||| ||||    
T  13865045 taatatacttttaattttaagaatattataacaacatagattaaatttgaaaaattcatataaacccttca 13865115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 29584299 - 29584237
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| |||||||||||   ||||||||||||||||||||    
T  29584299 tatatttttaattttaaaaataatataacaacatagattaattttgaagaattcatataaacc 29584237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 29612119 - 29612049
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttca 371  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||| |||||||||||||| ||||    
T  29612119 taatatatttttaattttaataatattataacaacatagatttaatttgaaaaattcatataaacccttca 29612049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 10878735 - 10878800
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| |  ||||||| |||||||||||    
T  10878735 taatatatttttaattttaaaaatattataacaacatatattaaatgtgaagaactcatataaacc 10878800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 16424266 - 16424201
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||  ||||| |||| | ||||||||||||||||||||    
T  16424266 taatatatttttaattttaagaatattataactacatatattaaatttgaagaattcatataaacc 16424201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 31297301 - 31297366
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||| ||||||||||||||    
T  31297301 taatatacttttaattttaagaatattataataacatagattgaatttgaaaaattcatataaacc 31297366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 34336158 - 34336093
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||| ||||| ||||||||||||  ||||| || |||||||| | ||||||||||||||||||||    
T  34336158 taataaatttttaattttaaaaataatataacaaaatagattaaatttgaagaattcatataaacc 34336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 35856484 - 35856556
Alignment:
Q  302 aatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    |||||||||| |||| ||| ||| |||||| || |||||||  | |||||||||||||||||||||| |||||    
T  35856484 aatatatttttaattataagaatattataacaatatagatttgatttgaagaattcatataaaccttgcaaaa 35856556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 356
Target Start/End: Complemental strand, 22330818 - 22330763
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaatt 356  Q
    ||||||||||| |||||||||||| |||| | ||||||||||| | ||||||||||    
T  22330818 taatatatttttaattttaaaaatattatcacaacatagattaaatttgaagaatt 22330763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 31150028 - 31149965
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||| ||| |||| ||| |||||| |||||||| || | ||||||||||||||||||||    
T  31150028 atatatttttaatattaagaatattataacaacatagaataaatttgaagaattcatataaacc 31149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 12506152 - 12506214
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||||||||  ||||| || ||| |||| | ||||||||||||||||||||    
T  12506152 tatatttttaattttaaaaataatataacaatatatattaaatttgaagaattcatataaacc 12506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 1942006 - 1942071
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  1942006 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 1942071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 2474720 - 2474785
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  2474720 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 2474785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 3404527 - 3404592
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  3404527 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 3404592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 13258614 - 13258549
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| | | || ||| ||||||||||  | ||||||||||||||||||||    
T  13258614 taatatatttttaattttaagagtattctaagaacatagattggatttgaagaattcatataaacc 13258549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 26042320 - 26042255
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| ||| | ||||| | ||| |||||| |||||||||    
T  26042320 taatatatttttaattttaaaaatattataacaactttgattaaatttgtagaatttatataaacc 26042255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 32158893 - 32158828
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| |||||| ||||   || || ||||||||||||||    
T  32158893 taatatatttttaattttaaaaatattataacaacatatattaattttaaaaaattcatataaacc 32158828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 34272643 - 34272578
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  34272643 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 34272578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 39405186 - 39405113
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagatt-atacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||||| |||||||||||| ||||||||| | ||||| | | ||||| |||||||||||| | ||||||||    
T  39405186 atatatttttaattttaaaaatattataataataaagattaaaatttgaaaaattcatataaatccttcaaaat 39405113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 3537331 - 3537273
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatata 362  Q
    |||||||| |||||||||||| ||||| |||||||||||| | ||||||||||||||||    
T  3537331 tatatttttaattttaaaaatattatattaacatagattaaatttgaagaattcatata 3537273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 39114917 - 39114982
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||  | ||||||||||||||||||||    
T  39114917 taatataattttaattttaagaatattataataacatagattgaatttgaagaattcatataaacc 39114982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 29623362 - 29623299
Alignment:
Q  303 atatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||| ||| |||||||| |||||| |||||| |||| | ||||||||||||||||||||    
T  29623362 atatatttttaatattaaaaatattataacaacatatattaaatttgaagaattcatataaacc 29623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 23420755 - 23420829
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    ||||||| ||| |||||||| ||| |||||| |||| |  ||| | |||||||||||||||||||||||||||||    
T  23420755 taatatacttttaattttaagaatattataacaacaaaagttaaatttgaagaattcatataaacctttcaaaat 23420829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 27922089 - 27922023
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    ||||||||||| |||||| ||||| |||||| |||||| |||| | ||||||||||||| |||||||    
T  27922089 taatatatttttaatttttaaaatattataacaacataaattaaatttgaagaattcatgtaaacct 27922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 39966831 - 39966897
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| | ||||| || ||||||||||||    
T  39966831 taatatatttttaattttaaaaatattataacaacatatattaaatttgaaaaaatcatataaacct 39966897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 46017333 - 46017267
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacct 367  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  | ||||| |||||||||||||||    
T  46017333 taatatacttttaattttaaaaatattataacaacatagattgaatttgaaaaattcatataaacct 46017267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 47359438 - 47359372
Alignment:
Q  301 taatatattttcaattttaaaaa-tgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| ||||||||||| |  ||||| ||||||||||| | ||||||||||||||||||||    
T  47359438 taatatatttttaattttaaaaaataatataacaacatagattaaatttgaagaattcatataaacc 47359372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 49183810 - 49183748
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||  |||||||||||  ||||| ||||||||||| | ||||||||||||||||||||    
T  49183810 tatattttttattttaaaaataatataacaacatagattaaatttgaagaattcatataaacc 49183748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 1339855 - 1339924
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaa 373  Q
    |||||||| |||||||| ||| ||||||||| |||||||| | ||||||||||||| |||| | ||||||    
T  1339855 tatattttaaattttaagaatattataataaaatagattaaatttgaagaattcatgtaaatccttcaaa 1339924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 13638554 - 13638482
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||||| |||||||| ||| ||||||  | |||||||| | ||||||||||||| ||||||||||||||    
T  13638554 taatatatttttaattttaagaatattataactatatagattaaatttgaagaattcat-taaacctttcaaaa 13638482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 19148295 - 19148230
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | |||||| |||||||||||||    
T  19148295 taatatatttttaattttaagaatattataacaacataaattaaatttgaagcattcatataaacc 19148230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 30697486 - 30697429
Alignment:
Q  307 attttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||| |||||||||||| || |||||||| | |||||| ||||||||||||||||||    
T  30697486 atttttaattttaaaaatattgtaataacaaatattatatttgaagaattcatataaa 30697429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 35283215 - 35283150
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| |  |||||||||||||||||||    
T  35283215 taatatatttttaattttaagaatattataacaacatatattaaatatgaagaattcatataaacc 35283150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 48444633 - 48444568
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||||||| |||||| || ||| |||| | |||| |||||||||||||||    
T  48444633 taatatatttttaattttaaaaatattataacaatatatattaaatttgaggaattcatataaacc 48444568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 52620788 - 52620853
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||  ||||||||||| |||||| |||||| |||| | ||||||||||||||| ||||    
T  52620788 taatatattttttattttaaaaatattataacaacatatattaaatttgaagaattcatattaacc 52620853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 53888615 - 53888550
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||| | |||||| |||| | ||||||||||||||||||||    
T  53888615 taatatatttttaattttaagaatattattacaacatatattaaatttgaagaattcatataaacc 53888550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 16883470 - 16883410
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||  |||||||||||  ||||| ||||||||||| | ||||||||||||||||||    
T  16883470 tatattttttattttaaaaataatataacaacatagattaaatttgaagaattcatataaa 16883410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 32700450 - 32700374
Alignment:
Q  302 aatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaattct 378  Q
    |||||||||| |||||||| ||| |||||| || ||| |||  ||   |||||||||||||||||||||||||||||    
T  32700450 aatatattttaaattttaagaatattataacaatataaattgaacagaaagaattcatataaacctttcaaaattct 32700374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 40674235 - 40674171
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaac 365  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | || ||||||||||||||||    
T  40674235 taatatatttttaattttaagaatattataacaacatatattaaatttaaagaattcatataaac 40674171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 30996201 - 30996142
Alignment:
Q  304 tatattttcaattttaaaaatgttataat-aacatagattatacttgaagaattcatata 362  Q
    |||||||| |||||||||||| ||||||| |||| |||||| | ||||||||||||||||    
T  30996201 tatatttttaattttaaaaatattataataaacaaagattaaatttgaagaattcatata 30996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 33900673 - 33900724
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattc 357  Q
    |||||| |||||||||||| |||||| ||||||||||| | |||||||||||    
T  33900673 tatttttaattttaaaaatattataacaacatagattaaatttgaagaattc 33900724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 44412108 - 44412175
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctt 368  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  | || || ||||||||||||||||    
T  44412108 taatatacttttaattttaaaaatattataacaacatagattgaatttaaaaaattcatataaacctt 44412175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 46891514 - 46891451
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||| | |||||||||| |||||||    
T  46891514 taatatatttttaattttaagaatattataacaacatatattaaatttgaagaatttatataaa 46891451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 49304336 - 49304273
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaa 364  Q
    ||||||||||| |||||||  ||| |||||||||||||| ||  | ||||||||||||||||||    
T  49304336 taatatatttttaattttatgaatattataataacataggttgaatttgaagaattcatataaa 49304273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 19793419 - 19793469
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaa 354  Q
    |||||||| |||||||||||| || ||||||||||||||| | ||||||||    
T  19793419 tatatttttaattttaaaaatattttaataacatagattaaatttgaagaa 19793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 34729293 - 34729355
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| ||||||| ||||  |||||||||||| |||| | || |||||||||||||||||    
T  34729293 tatatttttaattttacaaataatataataacatatattaaattttaagaattcatataaacc 34729355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 35989231 - 35989161
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||  |||||||||||  ||||| || |||||||| | |||||||||||||||||| | |||||||    
T  35989231 tatattttttattttaaaaataatataacaatatagattaaatttgaagaattcatataaatccttcaaaa 35989161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 37545303 - 37545241
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||| ||| |||||  |||||| |||||| ||||| ||||||||||||||    
T  37545303 tatattttaaattttaagaattttatagcaacatatattatatttgaataattcatataaacc 37545241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 41961930 - 41962000
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttca 371  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| |||||||||||||| ||||    
T  41961930 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacccttca 41962000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 2420787 - 2420722
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  2420787 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 2420722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 15499252 - 15499325
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaa 374  Q
    ||||||||||| |||||||| ||| ||||||  |||||||||| | ||||| |||| || |||||| |||||||    
T  15499252 taatatattttaaattttaagaatattataactacatagattaaatttgaaaaatttatgtaaacccttcaaaa 15499325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 27055869 - 27055922
Alignment:
Q  313 aattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  27055869 aattttaaaaatattataacaacatagattgaatttgaaaaattcatataaacc 27055922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 32858958 - 32858893
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| ||||||  |||||||||| | |||| |||||||| ||||||    
T  32858958 taatatatttttaattttaagaatattataactacatagattaaatttgatgaattcatgtaaacc 32858893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 39499326 - 39499261
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  39499326 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 39499261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 43007475 - 43007540
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  43007475 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 43007540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 46312373 - 46312438
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||||||| |||||  ||||||||||  | ||||| ||||||||||||||    
T  46312373 taatatacttttaattttaaaaatattatagcaacatagattgaatttgaaaaattcatataaacc 46312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 47714626 - 47714691
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  47714626 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 47714691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 47789399 - 47789464
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  47789399 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 47789464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 54126388 - 54126323
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||||||  ||||||| ||| |||||| ||||| ||||| | ||||||||||||| ||||||    
T  54126388 taatatattttttattttaacaatattataacaacatcgattaaatttgaagaattcatgtaaacc 54126323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 54372529 - 54372594
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||  ||| |||||| |||||||| |  | ||||||||||||||||||||    
T  54372529 taatatatttttaattttaggaatattataacaacatagactgaatttgaagaattcatataaacc 54372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 54877762 - 54877803
Alignment:
Q  302 aatatattttcaattttaaaaatgttataataacatagatta 343  Q
    |||||||||| |||||||||||||| ||||||| ||||||||    
T  54877762 aatatatttttaattttaaaaatgtcataataatatagatta 54877803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 37246 - 37175
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacctttcaaaat 375  Q
    |||||||| ||||||||||||  ||||| |||||| |||| | |||||||||||||||||||| | ||||||    
T  37246 tatatttttaattttaaaaataatataacaacatatattaaatttgaagaattcatataaaccctccaaaat 37175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 1706 - 1641
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  1706 taatatatttttaattttaagaatattataacaacatagattggatttgaaaaattcatataaacc 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 154 - 214
Alignment:
Q  306 tattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| |||||||||||| |||||| ||||||||||| | ||||||||||| ||| ||||    
T  154 tatttttaattttaaaaatattataacaacatagattaaatttgaagaattcttattaacc 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 3363 - 3302
Alignment:
Q  304 tatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||||| |||||||||| | |||||| ||||||||||| | ||||||||||| ||||||||    
T  3363 tatatttttaattttaaaa-tattataacaacatagattaaaattgaagaattcgtataaacc 3302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000008; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 3528 - 3586
Alignment:
Q  308 ttttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||| |||||||||||| |||||| || |||||||| | ||||||||||||||| ||||    
T  3528 tttttaattttaaaaatattataacaagatagattaaatttgaagaattcatattaacc 3586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 6717 - 6775
Alignment:
Q  308 ttttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||| |||||||||||| |||||| || |||||||| | ||||||||||||||| ||||    
T  6717 tttttaattttaaaaatattataacaagatagattaaatttgaagaattcatattaacc 6775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 7700 - 7758
Alignment:
Q  308 ttttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||| |||||||||||| |||||| || |||||||| | ||||||||||||||| ||||    
T  7700 tttttaattttaaaaatattataacaagatagattaaatttgaagaattcatattaacc 7758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 644 - 709
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    |||||| ||||  ||||||||||| |||||| || |||||||| | ||||||||||||||| ||||    
T  644 taatatgtttttcattttaaaaatattataacaagatagattaaatttgaagaattcatattaacc 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 35408 - 35473
Alignment:
Q  301 taatatattttcaattttaaaaatgttataataacatagattatacttgaagaattcatataaacc 366  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||||  | ||||| ||||||||||||||    
T  35408 taatatacttttaattttaagaatattataacaacatagattgaatttgaaaaattcatataaacc 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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