View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16949_low_1 (Length: 551)

Name: NF16949_low_1
Description: NF16949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16949_low_1
NF16949_low_1
[»] chr1 (20 HSPs)
chr1 (1-538)||(29099540-29100070)
chr1 (12-165)||(15495895-15496048)
chr1 (284-399)||(19258742-19258857)
chr1 (1-165)||(14351048-14351211)
chr1 (282-401)||(2509028-2509147)
chr1 (282-401)||(34307206-34307325)
chr1 (282-401)||(39249931-39250050)
chr1 (282-401)||(46901803-46901922)
chr1 (1-73)||(11814707-11814779)
chr1 (65-157)||(26842000-26842092)
chr1 (1-104)||(2077418-2077520)
chr1 (317-399)||(28647392-28647474)
chr1 (12-73)||(26842049-26842110)
chr1 (109-168)||(10494882-10494941)
chr1 (93-164)||(26236753-26236824)
chr1 (283-361)||(10146971-10147049)
chr1 (11-57)||(8039213-8039259)
chr1 (125-165)||(2077379-2077419)
chr1 (335-399)||(8848923-8848987)
chr1 (326-401)||(9642933-9643009)
[»] chr2 (24 HSPs)
chr2 (12-167)||(6705527-6705682)
chr2 (25-168)||(40900224-40900367)
chr2 (284-397)||(37914308-37914421)
chr2 (282-397)||(36315565-36315680)
chr2 (282-401)||(44958117-44958236)
chr2 (282-401)||(33732573-33732692)
chr2 (13-168)||(38531278-38531433)
chr2 (1-120)||(14950753-14950872)
chr2 (282-401)||(37498931-37499052)
chr2 (283-401)||(3830965-3831081)
chr2 (282-401)||(14572999-14573118)
chr2 (326-401)||(24137160-24137235)
chr2 (284-401)||(6376306-6376418)
chr2 (14-115)||(28164837-28164938)
chr2 (282-401)||(16089826-16089944)
chr2 (1-104)||(9910638-9910740)
chr2 (333-401)||(41188824-41188892)
chr2 (3-76)||(4869525-4869598)
chr2 (87-163)||(3921536-3921612)
chr2 (11-57)||(27888778-27888824)
chr2 (87-164)||(17282046-17282123)
chr2 (87-160)||(34660230-34660303)
chr2 (84-164)||(1895351-1895431)
chr2 (3-165)||(1551698-1551850)
[»] chr5 (31 HSPs)
chr5 (1-164)||(40680881-40681044)
chr5 (1-165)||(26331090-26331254)
chr5 (282-401)||(1815684-1815803)
chr5 (282-401)||(40888010-40888129)
chr5 (282-401)||(9408107-9408226)
chr5 (282-401)||(39370931-39371050)
chr5 (1-115)||(12156370-12156484)
chr5 (284-401)||(2237282-2237399)
chr5 (313-401)||(17225352-17225440)
chr5 (282-399)||(4300613-4300730)
chr5 (293-399)||(14831559-14831665)
chr5 (284-401)||(13347134-13347251)
chr5 (3-104)||(42268836-42268936)
chr5 (282-374)||(33404531-33404623)
chr5 (1-143)||(24867100-24867242)
chr5 (287-401)||(41003918-41004031)
chr5 (12-105)||(34574162-34574255)
chr5 (1-76)||(27170243-27170318)
chr5 (282-401)||(27553441-27553560)
chr5 (316-401)||(31800596-31800681)
chr5 (282-366)||(12164255-12164339)
chr5 (284-367)||(19596169-19596252)
chr5 (12-156)||(26656656-26656790)
chr5 (12-156)||(26928243-26928377)
chr5 (1-57)||(40599972-40600028)
chr5 (108-165)||(40599887-40599944)
chr5 (12-76)||(6030500-6030564)
chr5 (97-160)||(7271788-7271851)
chr5 (282-401)||(19124540-19124657)
chr5 (3-69)||(7271726-7271792)
chr5 (87-156)||(41355620-41355689)
[»] chr4 (24 HSPs)
chr4 (1-164)||(45873117-45873280)
chr4 (1-165)||(55728707-55728871)
chr4 (282-397)||(45829329-45829444)
chr4 (282-397)||(46192363-46192478)
chr4 (1-115)||(42677627-42677741)
chr4 (282-401)||(44275710-44275829)
chr4 (282-401)||(3672278-3672397)
chr4 (282-401)||(6112634-6112753)
chr4 (282-401)||(7217769-7217888)
chr4 (282-401)||(28093164-28093283)
chr4 (1-163)||(38093230-38093393)
chr4 (282-401)||(49243819-49243938)
chr4 (3-105)||(12130531-12130633)
chr4 (282-401)||(21391023-21391142)
chr4 (282-401)||(35544916-35545035)
chr4 (326-401)||(51038811-51038887)
chr4 (3-164)||(47518552-47518703)
chr4 (87-160)||(23054338-23054411)
chr4 (13-157)||(24957685-24957819)
chr4 (1-45)||(14441130-14441174)
chr4 (12-76)||(34227172-34227236)
chr4 (282-322)||(43245522-43245562)
chr4 (283-399)||(54849793-54849909)
chr4 (87-119)||(53202209-53202241)
[»] chr7 (27 HSPs)
chr7 (284-401)||(23980137-23980254)
chr7 (11-169)||(21590510-21590668)
chr7 (284-401)||(5811231-5811348)
chr7 (282-401)||(7699951-7700070)
chr7 (282-401)||(7700149-7700268)
chr7 (282-401)||(7700347-7700466)
chr7 (282-401)||(7700545-7700664)
chr7 (282-401)||(42221031-42221150)
chr7 (284-401)||(13108154-13108270)
chr7 (284-401)||(31148296-31148413)
chr7 (282-401)||(28307563-28307682)
chr7 (282-401)||(36346633-36346751)
chr7 (282-401)||(21807390-21807509)
chr7 (282-401)||(26972271-26972390)
chr7 (282-401)||(34108430-34108549)
chr7 (282-404)||(30887704-30887826)
chr7 (1-115)||(31039015-31039129)
chr7 (3-109)||(24718022-24718127)
chr7 (316-401)||(20086696-20086781)
chr7 (329-401)||(46475075-46475147)
chr7 (282-401)||(45782728-45782847)
chr7 (326-401)||(34828113-34828188)
chr7 (283-401)||(38321014-38321132)
chr7 (284-401)||(15020288-15020402)
chr7 (1-104)||(43047689-43047791)
chr7 (3-76)||(3302445-3302518)
chr7 (326-369)||(42950113-42950156)
[»] chr6 (9 HSPs)
chr6 (284-401)||(14022940-14023057)
chr6 (284-401)||(24208450-24208567)
chr6 (282-401)||(3986973-3987092)
chr6 (282-401)||(13697573-13697691)
chr6 (1-113)||(32747641-32747753)
chr6 (282-401)||(3118115-3118234)
chr6 (282-401)||(15345727-15345844)
chr6 (23-102)||(30845463-30845542)
chr6 (87-155)||(21881411-21881479)
[»] chr8 (21 HSPs)
chr8 (282-401)||(30432343-30432462)
chr8 (282-401)||(12665348-12665468)
chr8 (282-401)||(42162602-42162721)
chr8 (282-401)||(44081784-44081903)
chr8 (284-401)||(33726017-33726135)
chr8 (282-399)||(36189220-36189337)
chr8 (1-76)||(15050124-15050199)
chr8 (326-401)||(31318853-31318928)
chr8 (1-115)||(25142917-25143031)
chr8 (282-401)||(10203668-10203787)
chr8 (65-165)||(15050070-15050170)
chr8 (282-401)||(18184557-18184676)
chr8 (282-401)||(43186031-43186150)
chr8 (3-72)||(5515298-5515367)
chr8 (1-66)||(23635866-23635931)
chr8 (326-401)||(38845091-38845165)
chr8 (294-369)||(31547-31622)
chr8 (3-76)||(10408720-10408793)
chr8 (22-165)||(6443925-6444057)
chr8 (1-47)||(23635818-23635864)
chr8 (299-401)||(42668850-42668951)
[»] chr3 (22 HSPs)
chr3 (282-401)||(46112012-46112131)
chr3 (282-401)||(21559565-21559684)
chr3 (282-401)||(36749410-36749529)
chr3 (284-401)||(39467169-39467286)
chr3 (282-401)||(34749966-34750085)
chr3 (282-401)||(36370406-36370525)
chr3 (282-401)||(43999993-44000112)
chr3 (284-392)||(39072350-39072458)
chr3 (282-401)||(22894684-22894803)
chr3 (282-401)||(51339851-51339968)
chr3 (282-401)||(30735564-30735682)
chr3 (282-374)||(29460664-29460756)
chr3 (282-374)||(29471516-29471608)
chr3 (282-366)||(38231297-38231381)
chr3 (1-102)||(31699233-31699333)
chr3 (228-281)||(37067076-37067129)
chr3 (286-401)||(20856221-20856334)
chr3 (308-398)||(53638165-53638255)
chr3 (3-76)||(18269875-18269948)
chr3 (109-167)||(31699315-31699373)
chr3 (285-378)||(29820390-29820483)
chr3 (108-164)||(18269807-18269863)
[»] scaffold0062 (1 HSPs)
scaffold0062 (282-404)||(6722-6844)
[»] scaffold0092 (1 HSPs)
scaffold0092 (92-168)||(23272-23348)
[»] scaffold0043 (1 HSPs)
scaffold0043 (282-374)||(87259-87350)
[»] scaffold0027 (1 HSPs)
scaffold0027 (12-70)||(2963-3021)
[»] scaffold0044 (1 HSPs)
scaffold0044 (57-143)||(42826-42912)
[»] scaffold0725 (1 HSPs)
scaffold0725 (11-52)||(1080-1121)
[»] scaffold0088 (1 HSPs)
scaffold0088 (11-52)||(26996-27037)


Alignment Details
Target: chr1 (Bit Score: 396; Significance: 0; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 538
Target Start/End: Original strand, 29099540 - 29100070
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
29099540 taaccaccacaaaaaccatcgttaatactcaccaaaaactagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 29099639  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaagacccagtgtcagaaaataactcttgaggag 200  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
29099640 accaagaaccaccacgagcaccaccacagaagacccagtatcagcaccaccatggaaaccaccacaaaagacccagtgtcagaaaataactcttgaggag 29099739  T
201 agttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcggtcttatacataaaccatct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
29099740 agttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaactcatgttttgtagctcgagctggcggtcttatacataaaccacct 29099839  T
301 tagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattac 400  Q
    |||||| ||||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
29099840 tagatggcatacactc-tttacgtccacacacatttgtgacatgtgacaaaaacattgaaaaaagaaattaaaaggggtgatgatgtgatgtgaaattac 29099938  T
401 ttaacaaagannnnnnnnnaggaaactcaaccaagatctatatctatatcaatacgtttatctgttgacatagtggaaacacgtgttttgtgaaaatttt 500  Q
    |||| ||            |||||||| ||| |||||||||||||      ||||||||||||||| |||||||||||||||||||||||||||||||||    
29099939 ttaataattttttttttttaggaaacttaacaaagatctatatct------atacgtttatctgttaacatagtggaaacacgtgttttgtgaaaatttt 29100032  T
501 agtactatatctatatctatacgtttatctgttgacat 538  Q
    ||||||||||||||||||||||||||||||||||||||    
29100033 agtactatatctatatctatacgtttatctgttgacat 29100070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 15495895 - 15496048
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca 111  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||| |||||||||||||| |||||    
15495895 aaaaccaccattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaaaacaacatcagccaccacgagcatcaccaccaaaaacca 15495994  T
112 ccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    ||||||||| || |||| |||||| |||||||||||||||||||||||||||||    
15495995 ccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccac 15496048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 19258857 - 19258742
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    ||||||||||||||||| || || |||||||  |||||| | |||| | ||||||||||||||||||||||||||||||||||||| |||||||||| ||    
19258857 ttatacataaaccatctaaggtggcatacacctttttacacccacatatatttgtgacatgtggcaaaaacattgaaaaaagagatgaaaaggggtggtg 19258758  T
384 atgtgatgtgaaatta 399  Q
    ||||||||||||||||    
19258757 atgtgatgtgaaatta 19258742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14351211 - 14351048
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||| |||| || |||||||||||||||||| |||| || || |||| |||||||||    
14351211 taaccaccacaaaaaccaccattaattctcaccaaaaaccagcaccaaccaccactagcatcaccaccaaaaactaacaccagccaccacgagcatcacc 14351112  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    |  || |||||||||||| | || |||| || | ||| ||||| ||||| |||||||||||||||    
14351111 ataaaaaaccaccacgagaaccaccacaaaaaatccaatatcaacacca-catgaaaaccaccac 14351048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 2509028 - 2509147
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| |||||||||  ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||     
2509028 tcttatacatgaaccaccttaggtgacatacatccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgg 2509127  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
2509128 tgatatgatgtaaaattact 2509147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 34307325 - 34307206
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || ||||||| |||||||   ||||||||||||||||| |||||||||||||||||| |||| || |||| ||||||    
34307325 tcttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacattgaaagaagatatgaaaaagggtga 34307226  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
34307225 tgatatgatgtaaaattact 34307206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 39250050 - 39249931
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||||||| ||||||| |||| || ||     
39250050 tcttatacatgaaccatcttaggtggcatacacccttttacacccatacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatgg 39249951  T
382 tgatgtgatgtgaaattact 401  Q
    |||| | |||| ||||||||    
39249950 tgatataatgtaaaattact 39249931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 46901922 - 46901803
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| ||||||||||  |||||| |  ||||| |||||||||| |||||||||||||| ||| ||||||| |||| ||||||    
46901922 tcttatacatgaaccaccttaggtgacatacaccattttacaccaacacatatttgtgacacgtggcaaaaacattaaaagaagagatgaaaaagggtga 46901823  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
46901822 tgatatgatgtaaaattact 46901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11814707 - 11814779
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa 73  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
11814707 taaccatcacaaaaaccaccattaatcctcaccaaaaaccagcaccagccaccatgagcatcaccaccaaaaa 11814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 26842092 - 26842000
Alignment:
65 caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaa 157  Q
    ||||||||||||||| || || |||| ||||||| |||||| || ||||||||||| || |||| |||||||||||||| |||||||||||||    
26842092 caccaaaaaccaacaccagccaccacgagcatcaacaccaaaaatcaccacgagcaccaccacaaaagacccagtatcaacaccaccatgaaa 26842000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2077520 - 2077418
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||||||||||||||| | | ||||||||| ||||||||||||| |||||| ||||| || || |||  |||||||||    
2077520 taaccaccacaaaaaccaccattaatcctcaccaaaaatcggtaccagccaccacgagcatcacca-caaaaatcaacaccagccaccatgagcatcacc 2077422  T
101 acca 104  Q
    ||||    
2077421 acca 2077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 28647392 - 28647474
Alignment:
317 ttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatta 399  Q
    |||||| | |||||| |||||||| || ||||||||||||||||| || |||| |||||||||| ||||||||||||||||||    
28647392 ttttacacccacacatatttgtgatatttggcaaaaacattgaaagaatagatgaaaaggggtggtgatgtgatgtgaaatta 28647474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 26842110 - 26842049
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa 73  Q
    ||||| ||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
26842110 aaaacaaccattaatcctcaccaaaaaccaacaccagccaccacgagcatcaacaccaaaaa 26842049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 10494882 - 10494941
Alignment:
109 ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 168  Q
    |||||||||||| || |||| |||||||| ||||| ||||||||||||||||| ||||||    
10494882 ccaccacgagcaccaacacaaaagacccaatatcaacaccaccatgaaaaccatcacaaa 10494941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 26236824 - 26236753
Alignment:
93 gcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    |||||||||| || |||||||||||||| || |||| ||||| ||  |||||||||| ||||||||||||||    
26236824 gcatcaccactaaaaaccaccacgagcaccaccacaaaagactcaaaatcagcaccatcatgaaaaccacca 26236753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 10146971 - 10147049
Alignment:
283 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaa 361  Q
    |||||||||  |||| ||||| || ||||||| |||| || | |||||||| ||||||||||||||||||||| |||||    
10146971 cttatacatggaccaccttaggtggcatacaccctttgacccccacacacaattgtgacatgtggcaaaaacagtgaaa 10147049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 8039213 - 8039259
Alignment:
11 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 57  Q
    ||||||||||  |||||||||||||||||||||| ||||||| ||||    
8039213 aaaaaccaccagtaatcctcaccaaaaaccagcatcagccaccacga 8039259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 2077419 - 2077379
Alignment:
125 cacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
2077419 cacaaaagacccagtatcaacaccaccatggaaaccaccac 2077379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 8848987 - 8848923
Alignment:
335 ttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatta 399  Q
    |||||||||||| |||||||||||||| |||||||   | |||||||   |||||||||||||||    
8848987 ttgtgacatgtgacaaaaacattgaaataagagatgggagggggtgagagtgtgatgtgaaatta 8848923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 9643009 - 9642933
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaagggg-tgatgatgtgatgtgaaattact 401  Q
    |||||| | ||||||||  || |||||||| ||||| ||||||| | |||||| ||||||| |||||||||||||||    
9643009 cacacataattgtgacacatgacaaaaacaatgaaagaagagatgagaagggggtgatgatatgatgtgaaattact 9642933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 6705527 - 6705682
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca 111  Q
    ||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||| || || |||| |||||||||||||| |||||    
6705527 aaaaccaccattaatcctcaccaaaaaccaacaccaaccaccacgagcatcaccaccaaaaaacaacaccagccaccacgagcatcaccaccaaaaacca 6705626  T
112 ccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa 167  Q
    ||||||||| || |||| |||||| |||||||||||||||||||||||||||||||    
6705627 ccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccacaa 6705682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 40900224 - 40900367
Alignment:
25 atcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcat 124  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||  || |||  || ||||||||||| | |||||||||||| ||     
40900224 atcctcaccaaaaaccagcaccagccaccacgagcatcaccacaaaaaaccagcatctgccaccatgagtatcaccaccaaaagccaccacgagcaccac 40900323  T
125 cacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 168  Q
    |||| ||||||||||||||||||||||||  |||||||||||||    
40900324 cacaaaagacccagtatcagcaccaccatagaaaccaccacaaa 40900367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 37914421 - 37914308
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| ||||| || ||||||| |||||||   |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||     
37914421 ttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtgata 37914322  T
384 atgtgatgtgaaat 397  Q
    ||||||||||||||    
37914321 atgtgatgtgaaat 37914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 36315565 - 36315680
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||    
36315565 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaagaggtga 36315664  T
382 tgatgtgatgtgaaat 397  Q
    | ||||||||||||||    
36315665 taatgtgatgtgaaat 36315680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44958117 - 44958236
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
44958117 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaagggtga 44958216  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
44958217 tgatatgatgtaaaattact 44958236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 33732573 - 33732692
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||     
33732573 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagggtgg 33732672  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
33732673 tgatatgatgtaaaattact 33732692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 38531433 - 38531278
Alignment:
13 aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac 112  Q
    |||||| | ||||||||||| |||||||||||||| |||| || |||||||| ||||||||| |||| || || |||| || |||||| |||| || |||    
38531433 aaaccatcattaatcctcacaaaaaaccagcaccatccaccactagcatcacaaccaaaaactaacaccagccaccacgagtatcaccgccaaaaatcac 38531334  T
113 cacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 168  Q
    |||||||| || |||| || |||||||||||||||||||||| ||| |||||||||    
38531333 cacgagcaccaccacaaaaaacccagtatcagcaccaccatggaaaacaccacaaa 38531278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14950872 - 14950753
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||||||||||||||| ||  ||||||||| || |||||||||||||||||  |||| || ||||||| |||||||||    
14950872 taaccaccacaaaaaccaccattaatcctcaccaaaaatcaataccagccaccactagcatcaccaccaaaaaataacaccagccgccacgagcatcacc 14950773  T
101 accaagaaccaccacgagca 120  Q
    ||||| || |||||| ||||    
14950772 accaaaaatcaccacaagca 14950753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 37499052 - 37498931
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa--ggggt 379  Q
    ||||||| || ||||||||||  || ||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||   ||||    
37499052 tcttatatatcaaccatcttaactggcatacatccttttacactcacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagagggt 37498953  T
380 gatgatgtgatgtgaaattact 401  Q
    |||||| |||||| ||||||||    
37498952 gatgatatgatgtaaaattact 37498931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 3831081 - 3830965
Alignment:
283 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat 382  Q
    ||||||||| ||||| ||||| |||||||||| ||||||| | ||||||  ||||||||| |||||||||||||||||| ||||||| ||||| ||||||    
3831081 cttatacatgaaccaccttaggtgacatacacccttttacacccacaca--tttgtgacacgtggcaaaaacattgaaagaagagatgaaaagtggtgat 3830984  T
383 gatgtgatgtgaaattact 401  Q
     || |||||| ||||||||    
3830983 tatctgatgtaaaattact 3830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 14572999 - 14573118
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || ||| ||| |||||||   ||||||||||||||||| || ||||||||||||||| |||||||  ||| ||||||    
14572999 tcttatacataaaccaccttaggtggcatccacccttttacatccacacacatttgtgacacgtagcaaaaacattgaaagaagagatggaaaagggtga 14573098  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
14573099 tgatatgatgtaaaattact 14573118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 24137235 - 24137160
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||    
24137235 cacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaagggatgaggatgtgatgtgaaattact 24137160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 6376418 - 6376306
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| | ||| || ||||||| ||||||| | |||||||||||||||||||||||     |||||||| ||||||| |||| |||||| |    
6376418 ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggc-----cattgaaagaagagatgaaaatgggtgagg 6376324  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
6376323 atgtgatgtgaaattact 6376306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 28164938 - 28164837
Alignment:
14 aaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccacc 113  Q
    ||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || |||  |||||||||||||| |||||||    
28164938 aaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatgagcatcaccaccaaaaaccacc 28164839  T
114 ac 115  Q
    ||    
28164838 ac 28164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 16089826 - 16089944
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||  || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| |||||| |||||  ||||     
16089826 tcttatacatgaaccaccttaagtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagaga-taaaaaaggtgg 16089924  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
16089925 tgatatgatgtaaaattact 16089944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9910638 - 9910740
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||  |||||||| |||||||| || |||||||||| ||||| |||||||| ||||||||||| || || |||| |||||||||    
9910638 taaccaccacaaaaaccacaattaatccttaccaaaaatcaacaccagccaccacgagtatcaccac-aaaaaccaacaccaaccaccacgagcatcacc 9910736  T
101 acca 104  Q
    ||||    
9910737 acca 9910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 401
Target Start/End: Original strand, 41188824 - 41188892
Alignment:
333 atttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    |||| |||||||||||||||||||||||||| || || ||||||| |||||||||||||| ||||||||    
41188824 atttatgacatgtggcaaaaacattgaaaaatgatatgaaaagggatgatgatgtgatgtaaaattact 41188892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 4869525 - 4869598
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
4869525 accaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca 4869598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 3921536 - 3921612
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc 163  Q
    ||||||||||||||||||| |||||||||||||  |  |||| | ||||||  ||||||||||||| ||||||||||    
3921536 ccacaagcatcaccaccaaaaaccaccacgagccccgccacaaatgacccaaaatcagcaccaccaagaaaaccacc 3921612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 27888778 - 27888824
Alignment:
11 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 57  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||    
27888778 aaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacga 27888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 17282123 - 17282046
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    |||||| |||||||||||| ||||||||||||   |  |||| ||||||||  ||||||||||||| |||||||||||    
17282123 ccacaaacatcaccaccaaaaaccaccacgagtcccgccacaaaagacccaaaatcagcaccaccaagaaaaccacca 17282046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 34660230 - 34660303
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 160  Q
    ||||||| | ||||||||| ||||||||||||| ||  |||| || |||||  |||||||||||||||||||||    
34660230 ccacaagaaccaccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc 34660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 1895351 - 1895431
Alignment:
84 ccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    |||||| ||||||||||||||| |||||||||||||  |  |||| ||||||||  ||||  ||||||| |||||||||||    
1895351 ccgccataagcatcaccaccaaaaaccaccacgagccccgccacaaaagacccaaaatcaataccaccaagaaaaccacca 1895431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 1551850 - 1551698
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    |||||| |||||| |||| |||| ||||||| |||| || |||||||||| ||| ||| ||||| | |||||||          ||||||||||||||||    
1551850 accacctcaaaaatcaccattaaccctcacctaaaagcaacaccagccaccacgcgcagcaccatccaaaacca----------ccacaagcatcaccac 1551761  T
103 caagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    | | |||||||||||||  |  |||  ||||||||  |||||||| |||| ||||||||||||    
1551760 ccaaaaccaccacgagccccgccactaaagacccaaaatcagcactaccaagaaaaccaccac 1551698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40680881 - 40681044
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| || |||| |||||||||    
40680881 taaccaccacgaaaaccaccattaatcctcaccaaaaaccagcaccaaccaccatgagcatcaccaccaaaaaacaacatcagccaccacgagcatcacc 40680980  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    ||||| |||||||| ||||| || |||| |||||| ||||||| ||||||||| ||||||||||    
40680981 accaaaaaccaccatgagcaccaccacaaaagaccaagtatcaacaccaccataaaaaccacca 40681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26331254 - 26331090
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| || |||| |||||||||    
26331254 taaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccagacaccacgagcatcaccacctaaaaccaacatcagccaccacgagcatcacc 26331155  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    ||||| ||| |  |||  || || |||| ||||| || ||||| |||||||||  ||||||||||    
26331154 accaaaaactattacggacaccaccacaaaagactcaatatcaacaccaccatagaaaccaccac 26331090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 1815803 - 1815684
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| |||||||||| |||||||   |||||| |||||||||| |||||||||||||||||| ||||||| |||||||||||    
1815803 tcttatacatgaaccatcttaggtgacatacacccttttacatccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaggggtga 1815704  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
1815703 tgatatgatgtaaaattact 1815684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 40888129 - 40888010
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || ||||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||     
40888129 tcttatacataaaccaccttaggtggcatacactcttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgg 40888030  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
40888029 tgatatgatgtaaaattact 40888010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 9408226 - 9408107
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| || || |||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
9408226 tcttatacatgaaccacctcaggtgacatacgcccttttacactcacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 9408127  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
9408126 tgatatgatgtaaaattact 9408107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 39370931 - 39371050
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| ||| |||||||||||||| ||||||| |||| ||||||    
39370931 tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtgccaaaaacattgaaagaagagatgaaaaagggtga 39371030  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
39371031 tgatatgatgtaaaattact 39371050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12156370 - 12156484
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| || || ||||||||||||||    
12156370 taaccaccacaaaaaccatcattaattctcaccaaaaaccagcaccagccaccactagcatcaccaccaaaaactaacaccagccaccacaagcatcacc 12156469  T
101 accaagaaccaccac 115  Q
    | ||| |||||||||    
12156470 atcaaaaaccaccac 12156484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 2237282 - 2237399
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||| ||||| ||||| |||||||||| ||||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| ||||||||    
2237282 ttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgatg 2237381  T
384 atgtgatgtgaaattact 401  Q
    || |||||| ||||||||    
2237382 atatgatgtaaaattact 2237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 17225352 - 17225440
Alignment:
313 actcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||||||||    
17225352 actcttttacacccacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaagaggtgatgatgtgatgtgaaattact 17225440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 4300730 - 4300613
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| |||||| |||| ||||||| |  ||||||| | |||||| ||||||||||| ||||||||||||||||| ||||||| ||||  ||||     
4300730 tcttatacatgaaccattttaggtgacatatatccttttacacccacacatatttgtgacatatggcaaaaacattgaaataagagataaaaaatggtgg 4300631  T
382 tgatgtgatgtgaaatta 399  Q
    ||||||||||||||||||    
4300630 tgatgtgatgtgaaatta 4300613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 399
Target Start/End: Original strand, 14831559 - 14831665
Alignment:
293 aaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgt 392  Q
    ||||| ||||| || ||||||| ||||||| | ||||||||||||||| | |||||||||||||||||| ||||||| |||| |||||||||| ||||||    
14831559 aaccaccttaggtggcatacacccttttacacccacacacatttgtgatacgtggcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgt 14831658  T
393 gaaatta 399  Q
     ||||||    
14831659 aaaatta 14831665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 13347134 - 13347251
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| || |||| |||| | ||||||    
13347134 ttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaatagatgaaaaagagtgatg 13347233  T
384 atgtgatgtgaaattact 401  Q
    || ||||||  |||||||    
13347234 atatgatgtataattact 13347251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 42268936 - 42268836
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    |||||| ||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||| || || |||| |||||||||||    
42268936 accaccacaaaaaccaccattaatcctcaccaaaaatcagaaccagccaccacgagcatcacca-cgaaaaccaacaccagccaccacgagcatcaccac 42268838  T
103 ca 104  Q
    ||    
42268837 ca 42268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 33404623 - 33404531
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa 374  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||    
33404623 tcttatacatgaaccaccttaggtgccatacacacttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa 33404531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24867242 - 24867100
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||| | ||||||||||| |||||||||||||||||  |||||||||||| |||||||||  ||||||||| |  ||  | || |||| ||  |||||    
24867242 taaccaacacaaaaaccaccattaatcctcaccaaaaattagcaccagccaccacgagcatcctcaccaaaaatcggcactagccaccacgagtctcacc 24867143  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatca 143  Q
    ||||| |||||||||||||| || || | ||||||||||||||    
24867142 accaaaaaccaccacgagcaccaccataaaagacccagtatca 24867100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 41004031 - 41003918
Alignment:
287 tacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatg 386  Q
    ||||| |||||  |||| || ||||||| ||||||| |||| |||||||| |||||||||||||||| |||| ||||||| || ||||||| ||||||||    
41004031 tacatgaaccactttaggtggcatacacccttttacactcatacacatttatgacatgtggcaaaaatattg-aaaaagatataaaaagggatgatgatg 41003933  T
387 tgatgtgaaattact 401  Q
    |||||| ||||||||    
41003932 tgatgtaaaattact 41003918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 34574255 - 34574162
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaa 105  Q
    ||||||||| ||| |||||||||||||||| ||| |||||| |||||||||||||||||||| ||||| || || | || ||||||||||||||    
34574255 aaaaccaccattactcctcaccaaaaaccaacactagccaccacgagcatcaccaccaaaaatcaacaccagccactacgagcatcaccaccaa 34574162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27170318 - 27170243
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||| ||| |||||||||||||||    
27170318 taaccaccacaaaaaccaccattaatcctcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 27170243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 27553560 - 27553441
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| |||||| |||| || |||| ||  |||||| | ||||||||||||||||| |||||||||||||||||| ||||||  ||||  |||||    
27553560 tcttatacatgaaccattttaggtggcatataccattttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagaagaaaaatggtga 27553461  T
382 tgatgtgatgtgaaattact 401  Q
    | || |||||| ||||||||    
27553460 ttatctgatgtaaaattact 27553441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 316 - 401
Target Start/End: Original strand, 31800596 - 31800681
Alignment:
316 cttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    ||||||| | ||||||||||| ||||| |||||||||| ||||||| || |||| ||||||||||||||| |||||| ||||||||    
31800596 cttttacacccacacacatttatgacacgtggcaaaaatattgaaagaaaagatgaaaaggggtgatgatatgatgtaaaattact 31800681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 12164255 - 12164339
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaaga 366  Q
    |||||||||| ||||||||||| || || ||| ||||| |  |||||||||| ||||| ||||||||||||||||||||| ||||    
12164255 tcttatacatgaaccatcttaggtggcacacattctttaatactcacacacagttgtggcatgtggcaaaaacattgaaagaaga 12164339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 19596252 - 19596169
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagag 367  Q
    |||||||| ||||| ||||| || |||||||  ||||||   ||| |||||||||||||||||||||||||||||||| |||||    
19596252 ttatacatgaaccaccttaggtggcatacacctttttacatccacgcacatttgtgacatgtggcaaaaacattgaaagaagag 19596169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 26656656 - 26656790
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca 111  Q
    ||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||          ||||||||| ||||||||| |||||    
26656656 aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccacaagcaccaccaccaaaaacca 26656745  T
112 ccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 156  Q
    |||||||| ||  |||| || | |||  |||||||||||||||||    
26656746 ccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa 26656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 26928243 - 26928377
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca 111  Q
    ||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||          ||||||||| ||||||||| |||||    
26928243 aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccacaagcaccaccaccaaaaacca 26928332  T
112 ccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 156  Q
    |||||||| ||  |||| || | |||  |||||||||||||||||    
26928333 ccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa 26928377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40600028 - 40599972
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 57  Q
    |||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||||    
40600028 taaccaccacaaaaaccaccattaatcctcaccaaaaatcaacaccagccaccacga 40599972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 40599944 - 40599887
Alignment:
108 accaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    ||||||||||||| || |||| |||||| ||||||| ||||||| |||||||||||||    
40599944 accaccacgagcaccaccacaaaagacctagtatcaacaccaccgtgaaaaccaccac 40599887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 6030564 - 6030500
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    ||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
6030564 aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca 6030500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 7271788 - 7271851
Alignment:
97 caccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 160  Q
    ||||||||| ||||||||||||| ||  |||| || |||||  |||||||||||||||||||||    
7271788 caccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc 7271851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 19124657 - 19124540
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    ||||||||||  || |||||||||| |||||||  ||| || | |||||||| ||||||| ||||||||||||||| ||| ||||||| |||    ||||    
19124657 tcttatacatggactatcttagatggcatacaca-tttgacacccacacacaattgtgacgtgtggcaaaaacatt-aaagaagagatgaaagaatgtga 19124560  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
19124559 tgatatgatgtaaaattact 19124540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 7271726 - 7271792
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccacca 69  Q
    |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||    
7271726 accaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccacca 7271792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 41355689 - 41355620
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 156  Q
    |||||||||| |||||||| |||||| ||||||  |  |||| ||||||||  |||||||||||||||||    
41355689 ccacaagcataaccaccaaaaaccactacgagccccgccacaaaagacccaaaatcagcaccaccatgaa 41355620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45873117 - 45873280
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||  ||| |||||||||||||  ||||||||||| || || |||| |||||||||    
45873117 taaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccaaacaccacgagcatcaccataaaaaaccaacaccagccaccacgagcatcacc 45873216  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    ||||| ||||||||||| || || |||| |||||||| ||| | ||||||||||||||||||||    
45873217 accaaaaaccaccacgaacaccaccacaaaagacccaatattaacaccaccatgaaaaccacca 45873280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 55728707 - 55728871
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||||||||||||||||| |||| |  || |||| |||||||||    
55728707 taaccaccacaaaaaccaccattaatcctcaccaaaaactagtaccagccaccactagcatcaccaccaaaaactaacaccggccaccacgagcatcacc 55728806  T
101 accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    | ||| || ||||||||||| || |||| || |  |||||||| |||||||||| ||||||||||    
55728807 atcaaaaatcaccacgagcaccaccacaaaaaattcagtatcaacaccaccatggaaaccaccac 55728871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 45829444 - 45829329
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| |||||  |||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
45829444 tcttatacatgaaccactttaggtgacatacacctttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtga 45829345  T
382 tgatgtgatgtgaaat 397  Q
    | ||||||||||||||    
45829344 taatgtgatgtgaaat 45829329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 46192363 - 46192478
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| || || ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
46192363 tcttatacatgaatcaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtga 46192462  T
382 tgatgtgatgtgaaat 397  Q
    | ||||||||||||||    
46192463 taatgtgatgtgaaat 46192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42677741 - 42677627
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||||||| ||| |||||||||||||||||||| ||||| || || ||||||||||||||    
42677741 taaccaccacaaaaaccaccattaatcctcactaaaaacaagcaccagacaccacgagcatcaccaccaaaaatcaacaccagccaccacaagcatcacc 42677642  T
101 accaagaaccaccac 115  Q
     |||| |||||||||    
42677641 gccaaaaaccaccac 42677627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44275710 - 44275829
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || |||| ||  |||||| ||||||||||||||||||| ||| |||||| ||||||| |||||||||||| ||||||    
44275710 tcttatacataaaccaccttaggtggcatataccattttacactcacacacatttgtgacacgtgccaaaaatattgaaagaagagattaaaaagggtga 44275809  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
44275810 tgatatgatgtaaaattact 44275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 3672278 - 3672397
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| |||||||   ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
3672278 tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 3672377  T
382 tgatgtgatgtgaaattact 401  Q
    |||| ||||||  |||||||    
3672378 tgatatgatgtataattact 3672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 6112634 - 6112753
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| || |||    
6112634 tcttatacatgaaccaccttagatggcatacaccattttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatga 6112733  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
6112734 tgatatgatgtaaaattact 6112753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 7217769 - 7217888
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || ||||||| |||| || |  |||||||||||||||| |||||||||||||| ||| ||||||| |||| ||||||    
7217769 tcttatacataaaccaccttaggtggcatacaccctttaacacctacacacatttgtgacacgtggcaaaaacattaaaataagagataaaaaagggtga 7217868  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
7217869 tgatatgatgtaaaattact 7217888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 28093283 - 28093164
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||  |||||| |||| ||||||    
28093283 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaaggagagatgaaaaagggtga 28093184  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||| ||||    
28093183 tgatatgatgtaaaaatact 28093164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38093230 - 38093393
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| |||||| |||| | |||||||||||||||||| ||||| | || || |||||||||||||||||| |||| || || |||| |||||||||    
38093230 taaccaccacaaaaaacaccataaatcctcaccaaaaaccatcaccatctaccactagcatcaccaccaaaaactaacaccagccaccacgagcatcacc 38093329  T
101 acc-aagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc 163  Q
     || || |||||||||||| | || |||| || ||||||||||| |||||||||  ||||||||    
38093330 gccaaaaaaccaccacgagtaccaccacaaaaaacccagtatcaacaccaccatagaaaccacc 38093393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 49243819 - 49243938
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| |||||||   |||||||||||||||||||||||||||||||||||| ||||||| ||||   ||||    
49243819 tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaaaagtga 49243918  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
49243919 tgatatgatgtaaaattact 49243938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 12130531 - 12130633
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    |||||| ||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| || |||| | |||||||||    
12130531 accaccacaaaaactatcattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaacccaaaatcagccaccacgaccatcaccac 12130630  T
103 caa 105  Q
    |||    
12130631 caa 12130633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 21391142 - 21391023
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||| ||||||| ||||||| |||| | ||||    
21391142 tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaatgagtga 21391043  T
382 tgatgtgatgtgaaattact 401  Q
      || |||||| ||||||||    
21391042 atatatgatgtaaaattact 21391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 35544916 - 35545035
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| ||  ||||||  ||||||   |||| |||||||||| | |||||||||||||||||| |||| || |||||||||||    
35544916 tcttatacatgaaccatcttaggtggtatacaccattttacatccacatacatttgtgatacgtggcaaaaacattgaaagaagatataaaaaggggtga 35545015  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
35545016 tgatatgatgtaaaattact 35545035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 51038811 - 51038887
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa-ggggtgatgatgtgatgtgaaattact 401  Q
    |||||||| |||||||||||| |||||||||||||| ||||||| |||| ||||||||| |||||||||||||||||    
51038811 cacacacaattgtgacatgtgacaaaaacattgaaagaagagatgaaaagggggtgatggtgtgatgtgaaattact 51038887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 47518703 - 47518552
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    |||||| |||||| |||  |||| ||||||| |||| || |||||||||| |||||||  |||||| |||||||          |||||| |||||||||    
47518703 accaccacaaaaatcactattaaccctcacctaaaagcaacaccagccaccacgagcagtaccacccaaaacca----------ccacaaacatcaccac 47518614  T
103 caagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    ||| ||||||||||||| | | |||| |||| |||  ||||||| ||||| |||||||||||    
47518613 caaaaaccaccacgagccttaccacaaaagatccaaaatcagcaacaccaagaaaaccacca 47518552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 23054411 - 23054338
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 160  Q
    ||||||||| ||||||||| ||||| |||||||  |  |||| ||||||||  |||||||||||||||||||||    
23054411 ccacaagcaccaccaccaaaaaccatcacgagctccgccacaaaagacccaaaatcagcaccaccatgaaaacc 23054338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 24957819 - 24957685
Alignment:
13 aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac 112  Q
    |||| ||| |||| |||||||||||| || |||||||||| ||  |||||||||||||||||||          |||| |||| ||||  ||| || |||    
24957819 aaactaccattaaccctcaccaaaaaacaacaccagccaccacatgcatcaccaccaaaaacca----------ccacgagcaccaccgtcaaaaatcac 24957730  T
113 cacgagcatcatcacagaagacccagtatcagcaccaccatgaaa 157  Q
    |||||||| ||||||| |||| |||  ||||||||||||||||||    
24957729 cacgagcaccatcacaaaagaaccaaaatcagcaccaccatgaaa 24957685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14441130 - 14441174
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcac 45  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||    
14441130 taaccagcacaaaaaccaccattaatcctcaccaaaaaccagcac 14441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 34227236 - 34227172
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    ||||||||| |||| ||||||| |||| || |||||||||| ||| ||||||||||| |||||||    
34227236 aaaaccaccattaaccctcacctaaaagcaacaccagccaccacgcgcatcaccacccaaaacca 34227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 43245522 - 43245562
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttac 322  Q
    |||||||||| |||||||||||||||||||||| |||||||    
43245522 tcttatacatgaaccatcttagatgacatacacccttttac 43245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 54849793 - 54849909
Alignment:
283 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat 382  Q
    ||||||||| ||||| |||||||  | ||||| |||| |  | ||||| || |||||||| ||| |||||| ||||||| ||||||| | |  || ||||    
54849793 cttatacatgaaccaccttagatagcgtacacactttgatacccacacgcagttgtgacaagtgacaaaaatattgaaagaagagatgagagaggatgat 54849892  T
383 gatgtgatgtgaaatta 399  Q
    |||||||||||||||||    
54849893 gatgtgatgtgaaatta 54849909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 53202209 - 53202241
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagc 119  Q
    ||||||||||||||||||| |||||||||||||    
53202209 ccacaagcatcaccaccaaaaaccaccacgagc 53202241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 23980137 - 23980254
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| | ||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |    
23980137 ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaggggtgagg 23980236  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
23980237 atgtgatgtgaaattact 23980254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 21590668 - 21590510
Alignment:
11 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacc 110  Q
    |||||||||| ||| | ||||  |||||||| |||||| ||| |||||||||||||| |||||||||||||| || |||||||| |||||| ||| ||||    
21590668 aaaaaccaccattagttctcaaaaaaaaccaacaccagtcaccacgagcatcaccacaaaaaaccaacatcagccaccacaagcgtcaccatcaaaaacc 21590569  T
111 accacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaa 169  Q
    |||||||||  || |||| |||||||| |||||||||||||||  |||| |||||||||    
21590568 accacgagccccaccacaaaagacccaatatcagcaccaccatagaaactaccacaaaa 21590510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 5811348 - 5811231
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| | ||| || ||||||  ||||| | | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |    
5811348 ttatacataaaccaccataggtggcatacatcctttttcacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaggggtgagg 5811249  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
5811248 atgtgatgtgaaattact 5811231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700070 - 7699951
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || |||    
7700070 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga 7699971  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
7699970 tgatatgatataaaattact 7699951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700268 - 7700149
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || |||    
7700268 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga 7700169  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
7700168 tgatatgatataaaattact 7700149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700466 - 7700347
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || |||    
7700466 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga 7700367  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
7700366 tgatatgatataaaattact 7700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700664 - 7700545
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || |||    
7700664 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga 7700565  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
7700564 tgatatgatataaaattact 7700545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 42221150 - 42221031
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || |||||||| |||||| | ||||||||||||||||| |||||||||||||||||| |||| || |||||||||||    
42221150 tcttatacatgaaccaccttaggtggcatacacttttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagatataaaaaggggtga 42221051  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
42221050 tgatatgatgttaaattact 42221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 13108154 - 13108270
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| |||||  | ||||||| ||||||| | ||||||||||||||||||||||||||||| |||||| |||||| | |||||||||| |    
13108154 ttatacataaaccaccttaggcggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacgttgaaagaagaga-tgaaaggggtgagg 13108252  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
13108253 atgtgatgtgaaattact 13108270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 31148296 - 31148413
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||| ||||||||||| || ||||||| ||||||| | |||||||||||||||||  ||||||||||||||||| ||||||| |||| ||||||||    
31148296 ttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacatggcaaaaacattgaaagaagagatgaaaatgggtgatg 31148395  T
384 atgtgatgtgaaattact 401  Q
    || |||||| ||||||||    
31148396 atatgatgtaaaattact 31148413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 28307682 - 28307563
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||| | ||||| || ||||||| ||||||| | |||||||||||| |||| |||||||||||||||||| ||||||| |||| ||||||    
28307682 tcttatacataaactaccttaggtggcatacacccttttacacccacacacatttgcgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 28307583  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
28307582 tgatatgatgtaaaattact 28307563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 36346751 - 36346633
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||||||| ||||||| ||||  |||||    
36346751 tcttatacataaaccatcttaggtggcatacacccttttacacccagacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa-aggtga 36346653  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
36346652 tgatatgatgtaaaattact 36346633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 21807509 - 21807390
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | |||||| |||||||| |||||||||||| ||||||| ||||||| |||| || |||    
21807509 tcttatacatgaaccaccttagatggcatacaccattttacacccacacaaatttgtgatatgtggcaaaaatattgaaagaagagatgaaaatggatga 21807410  T
382 tgatgtgatgtgaaattact 401  Q
    |||||| |||||||||||||    
21807409 tgatgttatgtgaaattact 21807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 26972390 - 26972271
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||  |||||| |||| ||||||    
26972390 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttatgacacgtggcaaaaacattgaaaggagagatgaaaaagggtga 26972291  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
26972290 tgatatgatgtaaaattact 26972271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 34108430 - 34108549
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| | |||||| ||||||||||| || |||||||||||||  ||||||| |||| ||||||    
34108430 tcttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacatatgacaaaaacattgaatgaagagatgaaaaagggtga 34108529  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
34108530 tgatatgatgtaaaattact 34108549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 404
Target Start/End: Original strand, 30887704 - 30887826
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||| ||||||| || ||||||| ||||||| | |||| |||||||||||| || ||||||||||||||  ||||||| |||| ||||||    
30887704 tcttatacatgaacaatcttaggtggcatacacacttttacacccacatacatttgtgacacgtagcaaaaacattgaatgaagagatgaaaaagggtga 30887803  T
382 tgatgtgatgtgaaattacttaa 404  Q
    |||| |||||| |||||||||||    
30887804 tgatatgatgtaaaattacttaa 30887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31039015 - 31039129
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || |||  |||||||||    
31039015 taaccaccacaaaaaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatgagcatcacc 31039114  T
101 accaagaaccaccac 115  Q
    || || |||||||||    
31039115 actaaaaaccaccac 31039129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 24718022 - 24718127
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||   |||||||||| || || |||| |||||||||||    
24718022 accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacca-tgaaaaccaacaccaaccaccacgagcatcaccac 24718120  T
103 caagaac 109  Q
    || ||||    
24718121 catgaac 24718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 316 - 401
Target Start/End: Complemental strand, 20086781 - 20086696
Alignment:
316 cttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    ||||||| | |||| ||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
20086781 cttttacacccacatacatttgagacatctggcaaaaacattaaaagaagagataaaaaggggtgatgatgtgatgtgaaattact 20086696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 46475075 - 46475147
Alignment:
329 acacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
46475075 acacatttgtgacatgtaacaaaaacattgaaagaagagatgaaaaggggtgacgatgtgatgtgaaattact 46475147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 45782847 - 45782728
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| |||||  |||| || ||||||   |||||| | ||||||||||||||||| ||| |||||||||||||| ||||||| |||| ||||||    
45782847 tcttatacatcaaccactttaggtggcatacatcattttacacccacacacatttgtgacacgtgacaaaaacattgaaagaagagatgaaaaagggtga 45782748  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
45782747 tgatatgatgtaaaattact 45782728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 34828113 - 34828188
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| ||||| | ||||||| |||||| ||||||||    
34828113 cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaagtgatgatgatatgatgtaaaattact 34828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 38321014 - 38321132
Alignment:
283 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat 382  Q
    ||||||||| ||||||||||| || |||||||  ||| || | |||| ||| ||||||||||||||||||||||||||| |||| || | | | ||||||    
38321014 cttatacattaaccatcttaggtggcatacacattttaacacccacatacaattgtgacatgtggcaaaaacattgaaagaagatatgagaggaggtgat 38321113  T
383 gatgtgatgtgaaattact 401  Q
    | |||||||||||| ||||    
38321114 ggtgtgatgtgaaagtact 38321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 15020288 - 15020402
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| | ||| || ||||||  ||||||| | ||||  |||||||||||| ||||||||||||||||| ||||||   |||||||||| |    
15020288 ttatacataaaccaccataggtggcatacaaccttttacacccaca--catttgtgacatatggcaaaaacattgaaagaagaga-cgaaaggggtgaag 15020384  T
384 atgtgatgtgaaattact 401  Q
    || |||||||||||||||    
15020385 atatgatgtgaaattact 15020402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43047791 - 43047689
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||||||||| ||||| |||||||| |||| |||| ||| |||| | |||||||||| || || |||| ||||||| |    
43047791 taaccaccacaaaaaccaccattaatcctcacaaaaaatcagcaccaaccaccacgaacattacca-cgaaaaccaacaccagccaccacgagcatcatc 43047693  T
101 acca 104  Q
    ||||    
43047692 acca 43047689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 3302445 - 3302518
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||| ||||||||||| ||||  ||||||||||| || |||||||||| ||| ||| |||||||||||||||    
3302445 accaccacaaaaaccaccattaacactcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 3302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 369
Target Start/End: Complemental strand, 42950156 - 42950113
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagat 369  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
42950156 cacacacatttgtgatatgtggcaaatacattgaaaaaagagat 42950113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 14022940 - 14023057
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |    
14022940 ttatacataaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgacaaggggtgacg 14023039  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
14023040 atgtgatgtgaaattact 14023057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 24208450 - 24208567
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||||||||||| ||| ||  ||||||| |||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||| |    
24208450 ttatacataaaccatcataggtggtatacactattttacacccacacacatttgtgatatgtggcaaaaacattgaaagaagagatgaaaaagggtgagg 24208549  T
384 atgtgatgtgaaattact 401  Q
    ||||||||||||||||||    
24208550 atgtgatgtgaaattact 24208567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 3987092 - 3986973
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |||    
3987092 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaagggatga 3986993  T
382 tgatgtgatgtgaaattact 401  Q
    | || |||||| ||||||||    
3986992 taatatgatgtaaaattact 3986973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 13697573 - 13697691
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| | |||| ||||||||||||| ||||||| |||| ||||||    
13697573 tcttatacataaaccatcttagatgacatgcacccttttacac-catacacatttgtgatacgtggtaaaaacattgaaagaagagatgaaaacgggtga 13697671  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
13697672 tgatatgatataaaattact 13697691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32747753 - 32747641
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| |||  |||||||||||| |||||| |||||| || ||||||||||||||||||||||| || || |||  |||||||||    
32747753 taaccaccacaaaaaccaccattacacctcaccaaaaatcagcactagccaccaccagcatcaccaccaaaaaccaacaccagccaccatgagcatcacc 32747654  T
101 accaagaaccacc 113  Q
    ||||| |||||||    
32747653 accaaaaaccacc 32747641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 3118234 - 3118115
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    ||||||| || ||||| ||||| || ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| || |||| |||| |||||     
3118234 tcttatatatgaaccaccttaggtggcatacacccttttacactcacacacatttgtgacacgtggcaaaaacattgaaagaatagataaaaaagggtgg 3118135  T
382 tgatgtgatgtgaaattact 401  Q
    |||  |||||| ||||||||    
3118134 tgacatgatgtaaaattact 3118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 15345844 - 15345727
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || |||| |||||||||| | || |||  ||||||||| |||||||||||||||||| || |||| ||||  |||||    
15345844 tcttatacatcaaccaccttaggtggcatatactcttttacacccataca--tttgtgacacgtggcaaaaacattgaaagaaaagatgaaaaaaggtga 15345747  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
15345746 tgatatgatatcaaattact 15345727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 30845463 - 30845542
Alignment:
23 taatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 102  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||| ||||||| |||| || || |||| |||| ||||||    
30845463 taatcctcaccgaaaacaagcaccagccaacacgagcatcaccatcaaaaactaacaccagccaccacgagcaccaccac 30845542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 21881411 - 21881479
Alignment:
87 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatga 155  Q
    ||||||||| ||||||||| ||||||||||||   ||  ||| ||||||||  ||||||||||||||||    
21881411 ccacaagcaccaccaccaaaaaccaccacgagtcccacaacaaaagacccaaaatcagcaccaccatga 21881479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 30432343 - 30432462
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| ||||||| ||||||  | ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
30432343 tcttatacatgaaccaccttagatggcatacacccttttatacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaggggtga 30432442  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
30432443 tgatatgatgtaaaattact 30432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 12665348 - 12665468
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagat-taaaaggggtg 380  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||  |||| |||||    
12665348 tcttatacatgaaccaccttaggtggcatacacccttttacactcacacacatttgtaacatgtggcaaaaacattgaaagaagagataaaaaaagggtg 12665447  T
381 atgatgtgatgtgaaattact 401  Q
    ||||| |||||| ||||||||    
12665448 atgatatgatgtaaaattact 12665468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 42162602 - 42162721
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | || |||||||||||||| ||| |||||||||||||| ||||||| |||| ||||||    
42162602 tcttatacatgaaccaccttaggtgtcatacacccttttacacccaaacacatttgtgacacgtgacaaaaacattgaaagaagagatgaaaaagggtga 42162701  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
42162702 tgatatgatgtaaaattact 42162721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44081784 - 44081903
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | ||||||||||||| ||| |||| ||||||||||||| ||||||| |||| ||||||    
44081784 tcttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtaacacgtggaaaaaacattgaaagaagagatgaaaaagggtga 44081883  T
382 tgatgtgatgtgaaattact 401  Q
    |||| | |||| ||||||||    
44081884 tgatataatgtaaaattact 44081903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 33726017 - 33726135
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaag-gggtgat 382  Q
    ||||||||||||||  |||| || |||||||  |||||| | |||| ||||||||||||||||||||||||||||||| ||||||| ||||| || |||     
33726017 ttatacataaaccactttaggtggcatacacctttttacacccacaaacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaagtggatgac 33726116  T
383 gatgtgatgtgaaattact 401  Q
    |||||||||||||||||||    
33726117 gatgtgatgtgaaattact 33726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 282 - 399
Target Start/End: Original strand, 36189220 - 36189337
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | |||| |||||||||||| |||||||||| ||||||| ||||||| |||||| ||||    
36189220 tcttatacatgaaccatcttaggtggcatacacccttttacacccacatacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaaggagtga 36189319  T
382 tgatgtgatgtgaaatta 399  Q
    |||| |||| | ||||||    
36189320 tgatatgatataaaatta 36189337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15050199 - 15050124
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||||| ||||||||| | |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
15050199 taaccaccacaaaaaccatcattaatcctcaccaaaaactagcaccagccaccacgagcatcaccaccaaaaacca 15050124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 31318853 - 31318928
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||| |||||| ||||||||    
31318853 cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact 31318928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25142917 - 25143031
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| |||||| ||||  || |||||||| |||| ||||||||||||| ||||| |||||||||||||| ||||| || || |||  |||||||||    
25142917 taaccaccacaaaaatcaccactactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaatcaacaccaaccaccatgagcatcacc 25143016  T
101 accaagaaccaccac 115  Q
    ||||| |||||||||    
25143017 accaaaaaccaccac 25143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 10203668 - 10203787
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| |||||||||  |||||||   ||||||||||||||||| ||| |||||| ||||||| ||||||| |||| |||||     
10203668 tcttatacatgaaccaccttaggtgacatacatccttttacatccacacacatttgtgacacgtgacaaaaatattgaaagaagagatgaaaaagggtgg 10203767  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
10203768 tgatatgatataaaattact 10203787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 15050170 - 15050070
Alignment:
65 caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    |||||||||| | || || || |||| |||||||||||||| |||||||||||||| || |||| |||||| |||| ||||||||||||  |||||||||    
15050170 caccaaaaactagcaccagccaccacgagcatcaccaccaaaaaccaccacgagcaccaccacaaaagacctagtaccagcaccaccattgaaaccacca 15050071  T
165 c 165  Q
    |    
15050070 c 15050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 18184557 - 18184676
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    ||||||| || ||||| ||||  |||||||||| |||||||   |||||| |||||||||| ||||  |||||||||||  ||||||| |||||||||||    
18184557 tcttatatatgaaccaccttaagtgacatacacccttttacatccacacatatttgtgacacgtggtgaaaacattgaatgaagagatgaaaaggggtga 18184656  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
18184657 tgatatgatataaaattact 18184676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 43186031 - 43186150
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| |||||  |||| || |||| |||||||||| |   ||||||||||||| |||||||||||||||||||| || |||| ||||  |||||    
43186031 tcttatacatcaaccactttaggtggcatatactcttttacacctgcacacatttgtgatatgtggcaaaaacattgaaagaaaagatgaaaaaaggtga 43186130  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||| | ||||||||    
43186131 tgatatgatataaaattact 43186150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 5515298 - 5515367
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaa 72  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||| ||| ||||    
5515298 accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccaaccaccacgagcatcatcacgaaaa 5515367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23635866 - 23635931
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcacca 66  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||    
23635866 taacctccacaaaaaccaccattaatcctcaccaaaaatcagcaccagcctccacgagcatcacca 23635931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 38845165 - 38845091
Alignment:
326 cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact 401  Q
    |||||||| ||||||||||||| ||||| ||||||| || |||| || |||||||||||||||||| |||||||||    
38845165 cacacacaattgtgacatgtggaaaaaatattgaaagaaaagat-aagaggggtgatgatgtgatgagaaattact 38845091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 31622 - 31547
Alignment:
294 accatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagat 369  Q
    |||||||||| |  ||||||| |||| || | |||| ||| ||||||||||||||||||||||||||| |||||||    
31622 accatcttaggtagcatacacactttgacacccacatacaattgtgacatgtggcaaaaacattgaaagaagagat 31547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 10408720 - 10408793
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||| ||||||||||| ||||  |||||| |||| || |||||||||| ||| ||| |||||||||||||||    
10408720 accaccacaaaaaccaccattaactctcacctaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 10408793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 6443925 - 6444057
Alignment:
22 ttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcat 121  Q
    |||| ||||| |||||| || || ||||||| | |||||||||||||||||||||          |||| |||| ||||||||| ||||||  ||||||     
6443925 ttaaccctcatcaaaaaacaacaacagccaccatgagcatcaccaccaaaaacca----------ccacgagcaccaccaccaa-aaccacttcgagcac 6444013  T
122 catcacagaagacccagtatcagcaccaccatgaaaaccaccac 165  Q
    || |||| ||||||||  |||||| |||||||||||||||||||    
6444014 caccacaaaagacccaaaatcagccccaccatgaaaaccaccac 6444057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23635818 - 23635864
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcacca 47  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||    
23635818 taacctccacaaaaaccaccattaatcctcaccaaaaatcagcacca 23635864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 401
Target Start/End: Complemental strand, 42668951 - 42668850
Alignment:
299 cttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatt 398  Q
    ||||| || ||||||| |||| || | |||||||| |||||||| |||||||||||||| ||| |||| | | | || ||||||| | ||||||||||||    
42668951 cttaggtggcatacacactttgacacccacacacaattgtgacacgtggcaaaaacattaaaagaagata-tgagagaggtgatggtatgatgtgaaatt 42668853  T
399 act 401  Q
    |||    
42668852 act 42668850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 46112131 - 46112012
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||||||||| ||||||||||  ||||||   |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
46112131 tcttatacatgaaccatcttaggtgacatacaccattttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagggtga 46112032  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
46112031 tgatatgatgtaaaattact 46112012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 21559565 - 21559684
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||||||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||| ||||||| ||||||| |||| |||| |    
21559565 tcttatacataaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaaagggtaa 21559664  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
21559665 tgatatgatgtaaaattact 21559684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 36749410 - 36749529
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
36749410 tcttatacatgaaccaccttagatgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 36749509  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
36749510 tgatatgatgtaaaattact 36749529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 39467286 - 39467169
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||| ||||||||| | |||||||||||||| ||||||| | |||||| |||||||||||||| |||||| ||||||| ||||||| ||||||||||| |    
39467286 ttatccataaaccaccatagatgacatacacccttttacacccacacatatttgtgacatgtgccaaaaatattgaaagaagagatgaaaaggggtgagg 39467187  T
384 atgtgatgtgaaattact 401  Q
    ||||||| ||||||||||    
39467186 atgtgatatgaaattact 39467169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 34750085 - 34749966
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| ||||||    
34750085 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 34749986  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
34749985 tgatatgatgtaaaattact 34749966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 36370525 - 36370406
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || |||||||  |||||| | ||||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||    
36370525 tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaaagggtga 36370426  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
36370425 tgatatgatgtaaaattact 36370406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 43999993 - 44000112
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || |||||||  |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
43999993 tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 44000092  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
44000093 tgatatgatgtaaaattact 44000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 39072458 - 39072350
Alignment:
284 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg 383  Q
    |||||||| || || |||||||||||||||| ||||||| | |||| ||||||||||||||||||| ||||||| ||| ||||||| |||| ||||||||    
39072458 ttatacatgaatcaccttagatgacatacacccttttacacccacatacatttgtgacatgtggcataaacattaaaagaagagatgaaaatgggtgatg 39072359  T
384 atgtgatgt 392  Q
    |||||||||    
39072358 atgtgatgt 39072350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 22894684 - 22894803
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || |||    
22894684 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatga 22894783  T
382 tgatgtgatgtgaaattact 401  Q
    |||| ||||||  |||||||    
22894784 tgatatgatgtataattact 22894803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 51339968 - 51339851
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||||||||| ||||| || ||||||  ||||||| | ||||||  ||||||||| |||||||||||||||||| ||||||| |||| ||||||    
51339968 tcttatacataaaccaccttaggtggcatacatccttttacacccacaca--tttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 51339871  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
51339870 tgatatgatgtaaaattact 51339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 30735682 - 30735564
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    ||||||| || ||||| |||||||| ||||||| ||||||| | ||||||||| ||||||| |||||||||||||||||| |||| | ||||| ||||||    
30735682 tcttatatatgaaccaccttagatggcatacacccttttacacccacacacatctgtgacacgtggcaaaaacattgaaagaagata-taaaaagggtga 30735584  T
382 tgatgtgatgtgaaattact 401  Q
    |||| |||||| ||||||||    
30735583 tgatatgatgttaaattact 30735564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 29460664 - 29460756
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa 374  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||||||| ||||||| ||||    
29460664 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacattgaaagaagagatgaaaa 29460756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 29471516 - 29471608
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa 374  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||||||| ||||||| ||||    
29471516 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacattgaaagaagagatgaaaa 29471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 38231297 - 38231381
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaaga 366  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||    
38231297 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaaga 38231381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31699233 - 31699333
Alignment:
1 taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc 100  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| | | |||||||||| || || |||| |||| ||||    
31699233 taaccaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacta-cgaaaaccaacaccagccaccacgagcaccacc 31699331  T
101 ac 102  Q
    ||    
31699332 ac 31699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 37067076 - 37067129
Alignment:
228 accccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcgg 281  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
37067076 accccaaccataattcttgcaaagtaacccatgttttgtagctccagctggcgg 37067129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 20856334 - 20856221
Alignment:
286 atacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgat 385  Q
    |||||| |||||  |||| || ||||||| ||||||| | || ||||||||||||||||||||||||||||||| |||||| | ||||| || |||||||    
20856334 atacatgaaccactttaggtggcatacacccttttacacccatacacatttgtgacatgtggcaaaaacattga-aaaagata-taaaaaggatgatgat 20856237  T
386 gtgatgtgaaattact 401  Q
    ||||| | ||||||||    
20856236 gtgatataaaattact 20856221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 53638165 - 53638255
Alignment:
308 catacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatt 398  Q
    ||||||| |||| || | |||||||| | ||||||||||| |||||||| |||| ||||||| | | |||||||||||||||||| |||||    
53638165 catacaccctttaacacccacacacaatcgtgacatgtggtaaaaacatggaaagaagagatgagagggggtgatgatgtgatgtaaaatt 53638255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 18269948 - 18269875
Alignment:
3 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 76  Q
    |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
18269948 accaccacaaaaaccaccattaaccatcactaaaaaacaacaccagccaccacgcgcatcaccaccaaaaacca 18269875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 31699315 - 31699373
Alignment:
109 ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa 167  Q
    |||||||||||| || |||| |||||||| || || |||||||||| ||||||||||||    
31699315 ccaccacgagcaccaccacaaaagacccaataccaacaccaccatggaaaccaccacaa 31699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 29820483 - 29820390
Alignment:
285 tatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaagggg 378  Q
    |||||||| |||| ||||| || ||||||| |||| || | |||| ||| |||||| |||| ||||||||||| ||| ||||||| | ||||||    
29820483 tatacatagaccaccttaggtggcatacacactttgacacccacatacaattgtgagatgtagcaaaaacattaaaagaagagatgagaagggg 29820390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 18269863 - 18269807
Alignment:
108 accaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 164  Q
    ||||||||||||  || |||| ||||||||  |||| ||||||||||||||||||||    
18269863 accaccacgagccccaccacaaaagacccaaaatcaacaccaccatgaaaaccacca 18269807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 282 - 404
Target Start/End: Original strand, 6722 - 6844
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga 381  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
6722 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga 6821  T
382 tgatgtgatgtgaaattacttaa 404  Q
    |||| |||||| |||||||||||    
6822 tgatatgatgtaaaattacttaa 6844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 23272 - 23348
Alignment:
92 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 168  Q
    |||||||| ||||| |||||||||||||| || |||| |||||| |||||||||||||||||| |||||||||||||    
23272 agcatcacaaccaaaaaccaccacgagcaccaccacaaaagacctagtatcagcaccaccatggaaaccaccacaaa 23348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 87350 - 87259
Alignment:
282 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa 374  Q
    |||||||||| ||||| ||||| || ||||||| ||| ||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||    
87350 tcttatacatgaaccaccttaggtggcatacacccttgtacac-cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa 87259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2963 - 3021
Alignment:
12 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaa 70  Q
    |||| |||| ||| |||||||||||||||||||||| |||| |||||| ||||||||||    
2963 aaaatcaccattactcctcaccaaaaaccagcaccaaccaccacgagcttcaccaccaa 3021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 42912 - 42826
Alignment:
57 agcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatca 143  Q
    |||||||||||||||||| |||| |||||  |||  |||||||| |||| |||||||||||| | || |||| || ||| |||||||    
42912 agcatcaccaccaaaaactaacaccatccatcacgcgcatcaccgccaaaaaccaccacgagtaccaccacaaaaaacctagtatca 42826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 1080 - 1121
Alignment:
11 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 52  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
1080 aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 26996 - 27037
Alignment:
11 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 52  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
26996 aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac 27037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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