View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16949_low_1 (Length: 551)
Name: NF16949_low_1
Description: NF16949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16949_low_1 |
 |  |
|
| [»] scaffold0062 (1 HSPs) |
 |  |  |
|
| [»] scaffold0092 (1 HSPs) |
 |  |  |
|
| [»] scaffold0043 (1 HSPs) |
 |  |  |
|
| [»] scaffold0027 (1 HSPs) |
 |  |  |
|
| [»] scaffold0044 (1 HSPs) |
 |  |  |
|
| [»] scaffold0725 (1 HSPs) |
 |  |  |
|
| [»] scaffold0088 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 396; Significance: 0; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 538
Target Start/End: Original strand, 29099540 - 29100070
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29099540 |
taaccaccacaaaaaccatcgttaatactcaccaaaaactagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
29099639 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaagacccagtgtcagaaaataactcttgaggag |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29099640 |
accaagaaccaccacgagcaccaccacagaagacccagtatcagcaccaccatggaaaccaccacaaaagacccagtgtcagaaaataactcttgaggag |
29099739 |
T |
 |
| Q |
201 |
agttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcggtcttatacataaaccatct |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
29099740 |
agttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaactcatgttttgtagctcgagctggcggtcttatacataaaccacct |
29099839 |
T |
 |
| Q |
301 |
tagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattac |
400 |
Q |
| |
|
|||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29099840 |
tagatggcatacactc-tttacgtccacacacatttgtgacatgtgacaaaaacattgaaaaaagaaattaaaaggggtgatgatgtgatgtgaaattac |
29099938 |
T |
 |
| Q |
401 |
ttaacaaagannnnnnnnnaggaaactcaaccaagatctatatctatatcaatacgtttatctgttgacatagtggaaacacgtgttttgtgaaaatttt |
500 |
Q |
| |
|
|||| || |||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29099939 |
ttaataattttttttttttaggaaacttaacaaagatctatatct------atacgtttatctgttaacatagtggaaacacgtgttttgtgaaaatttt |
29100032 |
T |
 |
| Q |
501 |
agtactatatctatatctatacgtttatctgttgacat |
538 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29100033 |
agtactatatctatatctatacgtttatctgttgacat |
29100070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 15495895 - 15496048
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||| |||||||||||||| ||||| |
|
|
| T |
15495895 |
aaaaccaccattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaaaacaacatcagccaccacgagcatcaccaccaaaaacca |
15495994 |
T |
 |
| Q |
112 |
ccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
||||||||| || |||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15495995 |
ccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccac |
15496048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 19258857 - 19258742
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
||||||||||||||||| || || ||||||| |||||| | |||| | ||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
19258857 |
ttatacataaaccatctaaggtggcatacacctttttacacccacatatatttgtgacatgtggcaaaaacattgaaaaaagagatgaaaaggggtggtg |
19258758 |
T |
 |
| Q |
384 |
atgtgatgtgaaatta |
399 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
19258757 |
atgtgatgtgaaatta |
19258742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14351211 - 14351048
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||||||||||||||||||| |||| || |||||||||||||||||| |||| || || |||| ||||||||| |
|
|
| T |
14351211 |
taaccaccacaaaaaccaccattaattctcaccaaaaaccagcaccaaccaccactagcatcaccaccaaaaactaacaccagccaccacgagcatcacc |
14351112 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
| || |||||||||||| | || |||| || | ||| ||||| ||||| ||||||||||||||| |
|
|
| T |
14351111 |
ataaaaaaccaccacgagaaccaccacaaaaaatccaatatcaacacca-catgaaaaccaccac |
14351048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 2509028 - 2509147
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
2509028 |
tcttatacatgaaccaccttaggtgacatacatccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgg |
2509127 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
2509128 |
tgatatgatgtaaaattact |
2509147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 34307325 - 34307206
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| || |||| |||||| |
|
|
| T |
34307325 |
tcttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacattgaaagaagatatgaaaaagggtga |
34307226 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
34307225 |
tgatatgatgtaaaattact |
34307206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 39250050 - 39249931
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||||||| ||||||| |||| || || |
|
|
| T |
39250050 |
tcttatacatgaaccatcttaggtggcatacacccttttacacccatacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatgg |
39249951 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| | |||| |||||||| |
|
|
| T |
39249950 |
tgatataatgtaaaattact |
39249931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 46901922 - 46901803
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||| |||||| | ||||| |||||||||| |||||||||||||| ||| ||||||| |||| |||||| |
|
|
| T |
46901922 |
tcttatacatgaaccaccttaggtgacatacaccattttacaccaacacatatttgtgacacgtggcaaaaacattaaaagaagagatgaaaaagggtga |
46901823 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
46901822 |
tgatatgatgtaaaattact |
46901803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11814707 - 11814779
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa |
73 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
11814707 |
taaccatcacaaaaaccaccattaatcctcaccaaaaaccagcaccagccaccatgagcatcaccaccaaaaa |
11814779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 26842092 - 26842000
Alignment:
| Q |
65 |
caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaa |
157 |
Q |
| |
|
||||||||||||||| || || |||| ||||||| |||||| || ||||||||||| || |||| |||||||||||||| ||||||||||||| |
|
|
| T |
26842092 |
caccaaaaaccaacaccagccaccacgagcatcaacaccaaaaatcaccacgagcaccaccacaaaagacccagtatcaacaccaccatgaaa |
26842000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2077520 - 2077418
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| | | ||||||||| ||||||||||||| |||||| ||||| || || ||| ||||||||| |
|
|
| T |
2077520 |
taaccaccacaaaaaccaccattaatcctcaccaaaaatcggtaccagccaccacgagcatcacca-caaaaatcaacaccagccaccatgagcatcacc |
2077422 |
T |
 |
| Q |
101 |
acca |
104 |
Q |
| |
|
|||| |
|
|
| T |
2077421 |
acca |
2077418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 28647392 - 28647474
Alignment:
| Q |
317 |
ttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatta |
399 |
Q |
| |
|
|||||| | |||||| |||||||| || ||||||||||||||||| || |||| |||||||||| |||||||||||||||||| |
|
|
| T |
28647392 |
ttttacacccacacatatttgtgatatttggcaaaaacattgaaagaatagatgaaaaggggtggtgatgtgatgtgaaatta |
28647474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 26842110 - 26842049
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa |
73 |
Q |
| |
|
||||| ||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
26842110 |
aaaacaaccattaatcctcaccaaaaaccaacaccagccaccacgagcatcaacaccaaaaa |
26842049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 10494882 - 10494941
Alignment:
| Q |
109 |
ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa |
168 |
Q |
| |
|
|||||||||||| || |||| |||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
10494882 |
ccaccacgagcaccaacacaaaagacccaatatcaacaccaccatgaaaaccatcacaaa |
10494941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 26236824 - 26236753
Alignment:
| Q |
93 |
gcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
|||||||||| || |||||||||||||| || |||| ||||| || |||||||||| |||||||||||||| |
|
|
| T |
26236824 |
gcatcaccactaaaaaccaccacgagcaccaccacaaaagactcaaaatcagcaccatcatgaaaaccacca |
26236753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 10146971 - 10147049
Alignment:
| Q |
283 |
cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaa |
361 |
Q |
| |
|
||||||||| |||| ||||| || ||||||| |||| || | |||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
10146971 |
cttatacatggaccaccttaggtggcatacaccctttgacccccacacacaattgtgacatgtggcaaaaacagtgaaa |
10147049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 8039213 - 8039259
Alignment:
| Q |
11 |
aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga |
57 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||| |||| |
|
|
| T |
8039213 |
aaaaaccaccagtaatcctcaccaaaaaccagcatcagccaccacga |
8039259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 2077419 - 2077379
Alignment:
| Q |
125 |
cacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
|||| |||||||||||||| |||||||||| |||||||||| |
|
|
| T |
2077419 |
cacaaaagacccagtatcaacaccaccatggaaaccaccac |
2077379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 8848987 - 8848923
Alignment:
| Q |
335 |
ttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatta |
399 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| | ||||||| ||||||||||||||| |
|
|
| T |
8848987 |
ttgtgacatgtgacaaaaacattgaaataagagatgggagggggtgagagtgtgatgtgaaatta |
8848923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 9643009 - 9642933
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaagggg-tgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||| | |||||||| || |||||||| ||||| ||||||| | |||||| ||||||| ||||||||||||||| |
|
|
| T |
9643009 |
cacacataattgtgacacatgacaaaaacaatgaaagaagagatgagaagggggtgatgatatgatgtgaaattact |
9642933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 6705527 - 6705682
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca |
111 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||| || || |||| |||||||||||||| ||||| |
|
|
| T |
6705527 |
aaaaccaccattaatcctcaccaaaaaccaacaccaaccaccacgagcatcaccaccaaaaaacaacaccagccaccacgagcatcaccaccaaaaacca |
6705626 |
T |
 |
| Q |
112 |
ccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa |
167 |
Q |
| |
|
||||||||| || |||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6705627 |
ccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccacaa |
6705682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 40900224 - 40900367
Alignment:
| Q |
25 |
atcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcat |
124 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| || ||| || ||||||||||| | |||||||||||| || |
|
|
| T |
40900224 |
atcctcaccaaaaaccagcaccagccaccacgagcatcaccacaaaaaaccagcatctgccaccatgagtatcaccaccaaaagccaccacgagcaccac |
40900323 |
T |
 |
| Q |
125 |
cacagaagacccagtatcagcaccaccatgaaaaccaccacaaa |
168 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
40900324 |
cacaaaagacccagtatcagcaccaccatagaaaccaccacaaa |
40900367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 37914421 - 37914308
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| ||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
37914421 |
ttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtgata |
37914322 |
T |
 |
| Q |
384 |
atgtgatgtgaaat |
397 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
37914321 |
atgtgatgtgaaat |
37914308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 36315565 - 36315680
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
36315565 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaagaggtga |
36315664 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaat |
397 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
36315665 |
taatgtgatgtgaaat |
36315680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44958117 - 44958236
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
44958117 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaagggtga |
44958216 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
44958217 |
tgatatgatgtaaaattact |
44958236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 33732573 - 33732692
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
33732573 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagggtgg |
33732672 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
33732673 |
tgatatgatgtaaaattact |
33732692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 38531433 - 38531278
Alignment:
| Q |
13 |
aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac |
112 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||| |||| || |||||||| ||||||||| |||| || || |||| || |||||| |||| || ||| |
|
|
| T |
38531433 |
aaaccatcattaatcctcacaaaaaaccagcaccatccaccactagcatcacaaccaaaaactaacaccagccaccacgagtatcaccgccaaaaatcac |
38531334 |
T |
 |
| Q |
113 |
cacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa |
168 |
Q |
| |
|
|||||||| || |||| || |||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
38531333 |
cacgagcaccaccacaaaaaacccagtatcagcaccaccatggaaaacaccacaaa |
38531278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14950872 - 14950753
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || ||||||||| || ||||||||||||||||| |||| || ||||||| ||||||||| |
|
|
| T |
14950872 |
taaccaccacaaaaaccaccattaatcctcaccaaaaatcaataccagccaccactagcatcaccaccaaaaaataacaccagccgccacgagcatcacc |
14950773 |
T |
 |
| Q |
101 |
accaagaaccaccacgagca |
120 |
Q |
| |
|
||||| || |||||| |||| |
|
|
| T |
14950772 |
accaaaaatcaccacaagca |
14950753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 37499052 - 37498931
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa--ggggt |
379 |
Q |
| |
|
||||||| || |||||||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
37499052 |
tcttatatatcaaccatcttaactggcatacatccttttacactcacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagagggt |
37498953 |
T |
 |
| Q |
380 |
gatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||| |||||| |||||||| |
|
|
| T |
37498952 |
gatgatatgatgtaaaattact |
37498931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 3831081 - 3830965
Alignment:
| Q |
283 |
cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat |
382 |
Q |
| |
|
||||||||| ||||| ||||| |||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
3831081 |
cttatacatgaaccaccttaggtgacatacacccttttacacccacaca--tttgtgacacgtggcaaaaacattgaaagaagagatgaaaagtggtgat |
3830984 |
T |
 |
| Q |
383 |
gatgtgatgtgaaattact |
401 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
3830983 |
tatctgatgtaaaattact |
3830965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 14572999 - 14573118
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || ||| ||| ||||||| ||||||||||||||||| || ||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
14572999 |
tcttatacataaaccaccttaggtggcatccacccttttacatccacacacatttgtgacacgtagcaaaaacattgaaagaagagatggaaaagggtga |
14573098 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
14573099 |
tgatatgatgtaaaattact |
14573118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 24137235 - 24137160
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| |
|
|
| T |
24137235 |
cacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaagggatgaggatgtgatgtgaaattact |
24137160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 6376418 - 6376306
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| | ||| || ||||||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||| |||| |||||| | |
|
|
| T |
6376418 |
ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggc-----cattgaaagaagagatgaaaatgggtgagg |
6376324 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
6376323 |
atgtgatgtgaaattact |
6376306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 28164938 - 28164837
Alignment:
| Q |
14 |
aaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccacc |
113 |
Q |
| |
|
||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || ||| |||||||||||||| ||||||| |
|
|
| T |
28164938 |
aaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatgagcatcaccaccaaaaaccacc |
28164839 |
T |
 |
| Q |
114 |
ac |
115 |
Q |
| |
|
|| |
|
|
| T |
28164838 |
ac |
28164837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 16089826 - 16089944
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| |||||| ||||| |||| |
|
|
| T |
16089826 |
tcttatacatgaaccaccttaagtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagaga-taaaaaaggtgg |
16089924 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
16089925 |
tgatatgatgtaaaattact |
16089944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9910638 - 9910740
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||| || |||||||||| ||||| |||||||| ||||||||||| || || |||| ||||||||| |
|
|
| T |
9910638 |
taaccaccacaaaaaccacaattaatccttaccaaaaatcaacaccagccaccacgagtatcaccac-aaaaaccaacaccaaccaccacgagcatcacc |
9910736 |
T |
 |
| Q |
101 |
acca |
104 |
Q |
| |
|
|||| |
|
|
| T |
9910737 |
acca |
9910740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 401
Target Start/End: Original strand, 41188824 - 41188892
Alignment:
| Q |
333 |
atttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || || ||||||| |||||||||||||| |||||||| |
|
|
| T |
41188824 |
atttatgacatgtggcaaaaacattgaaaaatgatatgaaaagggatgatgatgtgatgtaaaattact |
41188892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 4869525 - 4869598
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
4869525 |
accaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca |
4869598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 3921536 - 3921612
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc |
163 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| | |||| | |||||| ||||||||||||| |||||||||| |
|
|
| T |
3921536 |
ccacaagcatcaccaccaaaaaccaccacgagccccgccacaaatgacccaaaatcagcaccaccaagaaaaccacc |
3921612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 27888778 - 27888824
Alignment:
| Q |
11 |
aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga |
57 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
27888778 |
aaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacga |
27888824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 17282123 - 17282046
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
|||||| |||||||||||| |||||||||||| | |||| |||||||| ||||||||||||| ||||||||||| |
|
|
| T |
17282123 |
ccacaaacatcaccaccaaaaaccaccacgagtcccgccacaaaagacccaaaatcagcaccaccaagaaaaccacca |
17282046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 34660230 - 34660303
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc |
160 |
Q |
| |
|
||||||| | ||||||||| ||||||||||||| || |||| || ||||| ||||||||||||||||||||| |
|
|
| T |
34660230 |
ccacaagaaccaccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc |
34660303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 1895351 - 1895431
Alignment:
| Q |
84 |
ccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||| | |||| |||||||| |||| ||||||| ||||||||||| |
|
|
| T |
1895351 |
ccgccataagcatcaccaccaaaaaccaccacgagccccgccacaaaagacccaaaatcaataccaccaagaaaaccacca |
1895431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 1551850 - 1551698
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
|||||| |||||| |||| |||| ||||||| |||| || |||||||||| ||| ||| ||||| | ||||||| |||||||||||||||| |
|
|
| T |
1551850 |
accacctcaaaaatcaccattaaccctcacctaaaagcaacaccagccaccacgcgcagcaccatccaaaacca----------ccacaagcatcaccac |
1551761 |
T |
 |
| Q |
103 |
caagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
| | ||||||||||||| | ||| |||||||| |||||||| |||| |||||||||||| |
|
|
| T |
1551760 |
ccaaaaccaccacgagccccgccactaaagacccaaaatcagcactaccaagaaaaccaccac |
1551698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 31)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40680881 - 40681044
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| || |||| ||||||||| |
|
|
| T |
40680881 |
taaccaccacgaaaaccaccattaatcctcaccaaaaaccagcaccaaccaccatgagcatcaccaccaaaaaacaacatcagccaccacgagcatcacc |
40680980 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
||||| |||||||| ||||| || |||| |||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
40680981 |
accaaaaaccaccatgagcaccaccacaaaagaccaagtatcaacaccaccataaaaaccacca |
40681044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26331254 - 26331090
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| || |||| ||||||||| |
|
|
| T |
26331254 |
taaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccagacaccacgagcatcaccacctaaaaccaacatcagccaccacgagcatcacc |
26331155 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
||||| ||| | ||| || || |||| ||||| || ||||| ||||||||| |||||||||| |
|
|
| T |
26331154 |
accaaaaactattacggacaccaccacaaaagactcaatatcaacaccaccatagaaaccaccac |
26331090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 1815803 - 1815684
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| ||||||| |||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
1815803 |
tcttatacatgaaccatcttaggtgacatacacccttttacatccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaggggtga |
1815704 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
1815703 |
tgatatgatgtaaaattact |
1815684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 40888129 - 40888010
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
40888129 |
tcttatacataaaccaccttaggtggcatacactcttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgg |
40888030 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
40888029 |
tgatatgatgtaaaattact |
40888010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 9408226 - 9408107
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| || || |||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
9408226 |
tcttatacatgaaccacctcaggtgacatacgcccttttacactcacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
9408127 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
9408126 |
tgatatgatgtaaaattact |
9408107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 39370931 - 39371050
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| ||| |||||||||||||| ||||||| |||| |||||| |
|
|
| T |
39370931 |
tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtgccaaaaacattgaaagaagagatgaaaaagggtga |
39371030 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
39371031 |
tgatatgatgtaaaattact |
39371050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12156370 - 12156484
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| || || |||||||||||||| |
|
|
| T |
12156370 |
taaccaccacaaaaaccatcattaattctcaccaaaaaccagcaccagccaccactagcatcaccaccaaaaactaacaccagccaccacaagcatcacc |
12156469 |
T |
 |
| Q |
101 |
accaagaaccaccac |
115 |
Q |
| |
|
| ||| ||||||||| |
|
|
| T |
12156470 |
atcaaaaaccaccac |
12156484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 2237282 - 2237399
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||| ||||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| |||||||| |
|
|
| T |
2237282 |
ttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgatg |
2237381 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
2237382 |
atatgatgtaaaattact |
2237399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 17225352 - 17225440
Alignment:
| Q |
313 |
actcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
17225352 |
actcttttacacccacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaagaggtgatgatgtgatgtgaaattact |
17225440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 4300730 - 4300613
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| |||||| |||| ||||||| | ||||||| | |||||| ||||||||||| ||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
4300730 |
tcttatacatgaaccattttaggtgacatatatccttttacacccacacatatttgtgacatatggcaaaaacattgaaataagagataaaaaatggtgg |
4300631 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaatta |
399 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4300630 |
tgatgtgatgtgaaatta |
4300613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 399
Target Start/End: Original strand, 14831559 - 14831665
Alignment:
| Q |
293 |
aaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgt |
392 |
Q |
| |
|
||||| ||||| || ||||||| ||||||| | ||||||||||||||| | |||||||||||||||||| ||||||| |||| |||||||||| |||||| |
|
|
| T |
14831559 |
aaccaccttaggtggcatacacccttttacacccacacacatttgtgatacgtggcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgt |
14831658 |
T |
 |
| Q |
393 |
gaaatta |
399 |
Q |
| |
|
|||||| |
|
|
| T |
14831659 |
aaaatta |
14831665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 13347134 - 13347251
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| || |||| |||| | |||||| |
|
|
| T |
13347134 |
ttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaatagatgaaaaagagtgatg |
13347233 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|| |||||| ||||||| |
|
|
| T |
13347234 |
atatgatgtataattact |
13347251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 42268936 - 42268836
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||| || || |||| ||||||||||| |
|
|
| T |
42268936 |
accaccacaaaaaccaccattaatcctcaccaaaaatcagaaccagccaccacgagcatcacca-cgaaaaccaacaccagccaccacgagcatcaccac |
42268838 |
T |
 |
| Q |
103 |
ca |
104 |
Q |
| |
|
|| |
|
|
| T |
42268837 |
ca |
42268836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 33404623 - 33404531
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa |
374 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
33404623 |
tcttatacatgaaccaccttaggtgccatacacacttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa |
33404531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24867242 - 24867100
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||| | || | || |||| || ||||| |
|
|
| T |
24867242 |
taaccaacacaaaaaccaccattaatcctcaccaaaaattagcaccagccaccacgagcatcctcaccaaaaatcggcactagccaccacgagtctcacc |
24867143 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatca |
143 |
Q |
| |
|
||||| |||||||||||||| || || | |||||||||||||| |
|
|
| T |
24867142 |
accaaaaaccaccacgagcaccaccataaaagacccagtatca |
24867100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 41004031 - 41003918
Alignment:
| Q |
287 |
tacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatg |
386 |
Q |
| |
|
||||| ||||| |||| || ||||||| ||||||| |||| |||||||| |||||||||||||||| |||| ||||||| || ||||||| |||||||| |
|
|
| T |
41004031 |
tacatgaaccactttaggtggcatacacccttttacactcatacacatttatgacatgtggcaaaaatattg-aaaaagatataaaaagggatgatgatg |
41003933 |
T |
 |
| Q |
387 |
tgatgtgaaattact |
401 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
41003932 |
tgatgtaaaattact |
41003918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 34574255 - 34574162
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaa |
105 |
Q |
| |
|
||||||||| ||| |||||||||||||||| ||| |||||| |||||||||||||||||||| ||||| || || | || |||||||||||||| |
|
|
| T |
34574255 |
aaaaccaccattactcctcaccaaaaaccaacactagccaccacgagcatcaccaccaaaaatcaacaccagccactacgagcatcaccaccaa |
34574162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27170318 - 27170243
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
27170318 |
taaccaccacaaaaaccaccattaatcctcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca |
27170243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 27553560 - 27553441
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| |||||| |||| || |||| || |||||| | ||||||||||||||||| |||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
27553560 |
tcttatacatgaaccattttaggtggcatataccattttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagaagaaaaatggtga |
27553461 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
| || |||||| |||||||| |
|
|
| T |
27553460 |
ttatctgatgtaaaattact |
27553441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 316 - 401
Target Start/End: Original strand, 31800596 - 31800681
Alignment:
| Q |
316 |
cttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||| | ||||||||||| ||||| |||||||||| ||||||| || |||| ||||||||||||||| |||||| |||||||| |
|
|
| T |
31800596 |
cttttacacccacacacatttatgacacgtggcaaaaatattgaaagaaaagatgaaaaggggtgatgatatgatgtaaaattact |
31800681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 12164255 - 12164339
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaaga |
366 |
Q |
| |
|
|||||||||| ||||||||||| || || ||| ||||| | |||||||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
12164255 |
tcttatacatgaaccatcttaggtggcacacattctttaatactcacacacagttgtggcatgtggcaaaaacattgaaagaaga |
12164339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 19596252 - 19596169
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagag |
367 |
Q |
| |
|
|||||||| ||||| ||||| || ||||||| |||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19596252 |
ttatacatgaaccaccttaggtggcatacacctttttacatccacgcacatttgtgacatgtggcaaaaacattgaaagaagag |
19596169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 26656656 - 26656790
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca |
111 |
Q |
| |
|
||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| ||||| |
|
|
| T |
26656656 |
aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccacaagcaccaccaccaaaaacca |
26656745 |
T |
 |
| Q |
112 |
ccacgagcatcatcacagaagacccagtatcagcaccaccatgaa |
156 |
Q |
| |
|
|||||||| || |||| || | ||| ||||||||||||||||| |
|
|
| T |
26656746 |
ccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa |
26656790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 26928243 - 26928377
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacca |
111 |
Q |
| |
|
||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| ||||| |
|
|
| T |
26928243 |
aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccacaagcaccaccaccaaaaacca |
26928332 |
T |
 |
| Q |
112 |
ccacgagcatcatcacagaagacccagtatcagcaccaccatgaa |
156 |
Q |
| |
|
|||||||| || |||| || | ||| ||||||||||||||||| |
|
|
| T |
26928333 |
ccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa |
26928377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40600028 - 40599972
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga |
57 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || |||||||||| |||| |
|
|
| T |
40600028 |
taaccaccacaaaaaccaccattaatcctcaccaaaaatcaacaccagccaccacga |
40599972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 40599944 - 40599887
Alignment:
| Q |
108 |
accaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
||||||||||||| || |||| |||||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
40599944 |
accaccacgagcaccaccacaaaagacctagtatcaacaccaccgtgaaaaccaccac |
40599887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 6030564 - 6030500
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
6030564 |
aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca |
6030500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 7271788 - 7271851
Alignment:
| Q |
97 |
caccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc |
160 |
Q |
| |
|
||||||||| ||||||||||||| || |||| || ||||| ||||||||||||||||||||| |
|
|
| T |
7271788 |
caccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc |
7271851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 19124657 - 19124540
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| || |||||||||| ||||||| ||| || | |||||||| ||||||| ||||||||||||||| ||| ||||||| ||| |||| |
|
|
| T |
19124657 |
tcttatacatggactatcttagatggcatacaca-tttgacacccacacacaattgtgacgtgtggcaaaaacatt-aaagaagagatgaaagaatgtga |
19124560 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
19124559 |
tgatatgatgtaaaattact |
19124540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 7271726 - 7271792
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccacca |
69 |
Q |
| |
|
|||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||| |
|
|
| T |
7271726 |
accaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccacca |
7271792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 41355689 - 41355620
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaa |
156 |
Q |
| |
|
|||||||||| |||||||| |||||| |||||| | |||| |||||||| ||||||||||||||||| |
|
|
| T |
41355689 |
ccacaagcataaccaccaaaaaccactacgagccccgccacaaaagacccaaaatcagcaccaccatgaa |
41355620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 24)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45873117 - 45873280
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||| || || |||| ||||||||| |
|
|
| T |
45873117 |
taaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccaaacaccacgagcatcaccataaaaaaccaacaccagccaccacgagcatcacc |
45873216 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
||||| ||||||||||| || || |||| |||||||| ||| | |||||||||||||||||||| |
|
|
| T |
45873217 |
accaaaaaccaccacgaacaccaccacaaaagacccaatattaacaccaccatgaaaaccacca |
45873280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 55728707 - 55728871
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||||||||||||||||| |||| | || |||| ||||||||| |
|
|
| T |
55728707 |
taaccaccacaaaaaccaccattaatcctcaccaaaaactagtaccagccaccactagcatcaccaccaaaaactaacaccggccaccacgagcatcacc |
55728806 |
T |
 |
| Q |
101 |
accaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
| ||| || ||||||||||| || |||| || | |||||||| |||||||||| |||||||||| |
|
|
| T |
55728807 |
atcaaaaatcaccacgagcaccaccacaaaaaattcagtatcaacaccaccatggaaaccaccac |
55728871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 45829444 - 45829329
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
45829444 |
tcttatacatgaaccactttaggtgacatacacctttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtga |
45829345 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaat |
397 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
45829344 |
taatgtgatgtgaaat |
45829329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 46192363 - 46192478
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| || || ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
46192363 |
tcttatacatgaatcaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaggggtga |
46192462 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaat |
397 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
46192463 |
taatgtgatgtgaaat |
46192478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42677741 - 42677627
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| |||||| |||||||| ||| |||||||||||||||||||| ||||| || || |||||||||||||| |
|
|
| T |
42677741 |
taaccaccacaaaaaccaccattaatcctcactaaaaacaagcaccagacaccacgagcatcaccaccaaaaatcaacaccagccaccacaagcatcacc |
42677642 |
T |
 |
| Q |
101 |
accaagaaccaccac |
115 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
42677641 |
gccaaaaaccaccac |
42677627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44275710 - 44275829
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || |||| || |||||| ||||||||||||||||||| ||| |||||| ||||||| |||||||||||| |||||| |
|
|
| T |
44275710 |
tcttatacataaaccaccttaggtggcatataccattttacactcacacacatttgtgacacgtgccaaaaatattgaaagaagagattaaaaagggtga |
44275809 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
44275810 |
tgatatgatgtaaaattact |
44275829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 3672278 - 3672397
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
3672278 |
tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
3672377 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| ||||||| |
|
|
| T |
3672378 |
tgatatgatgtataattact |
3672397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 6112634 - 6112753
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| |||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
6112634 |
tcttatacatgaaccaccttagatggcatacaccattttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatga |
6112733 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
6112734 |
tgatatgatgtaaaattact |
6112753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 7217769 - 7217888
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||| |||| || | |||||||||||||||| |||||||||||||| ||| ||||||| |||| |||||| |
|
|
| T |
7217769 |
tcttatacataaaccaccttaggtggcatacaccctttaacacctacacacatttgtgacacgtggcaaaaacattaaaataagagataaaaaagggtga |
7217868 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
7217869 |
tgatatgatgtaaaattact |
7217888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 28093283 - 28093164
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
28093283 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaaggagagatgaaaaagggtga |
28093184 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| ||| |||| |
|
|
| T |
28093183 |
tgatatgatgtaaaaatact |
28093164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38093230 - 38093393
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| |||||| |||| | |||||||||||||||||| ||||| | || || |||||||||||||||||| |||| || || |||| ||||||||| |
|
|
| T |
38093230 |
taaccaccacaaaaaacaccataaatcctcaccaaaaaccatcaccatctaccactagcatcaccaccaaaaactaacaccagccaccacgagcatcacc |
38093329 |
T |
 |
| Q |
101 |
acc-aagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc |
163 |
Q |
| |
|
|| || |||||||||||| | || |||| || ||||||||||| ||||||||| |||||||| |
|
|
| T |
38093330 |
gccaaaaaaccaccacgagtaccaccacaaaaaacccagtatcaacaccaccatagaaaccacc |
38093393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 49243819 - 49243938
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
49243819 |
tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagataaaaaaaagtga |
49243918 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
49243919 |
tgatatgatgtaaaattact |
49243938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 12130531 - 12130633
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
|||||| ||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| || |||| | ||||||||| |
|
|
| T |
12130531 |
accaccacaaaaactatcattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaacccaaaatcagccaccacgaccatcaccac |
12130630 |
T |
 |
| Q |
103 |
caa |
105 |
Q |
| |
|
||| |
|
|
| T |
12130631 |
caa |
12130633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 21391142 - 21391023
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||| ||||||| ||||||| |||| | |||| |
|
|
| T |
21391142 |
tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaatgagtga |
21391043 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
21391042 |
atatatgatgtaaaattact |
21391023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 35544916 - 35545035
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| || |||||| |||||| |||| |||||||||| | |||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
35544916 |
tcttatacatgaaccatcttaggtggtatacaccattttacatccacatacatttgtgatacgtggcaaaaacattgaaagaagatataaaaaggggtga |
35545015 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
35545016 |
tgatatgatgtaaaattact |
35545035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 51038811 - 51038887
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa-ggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||| |
|
|
| T |
51038811 |
cacacacaattgtgacatgtgacaaaaacattgaaagaagagatgaaaagggggtgatggtgtgatgtgaaattact |
51038887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 47518703 - 47518552
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
|||||| |||||| ||| |||| ||||||| |||| || |||||||||| ||||||| |||||| ||||||| |||||| ||||||||| |
|
|
| T |
47518703 |
accaccacaaaaatcactattaaccctcacctaaaagcaacaccagccaccacgagcagtaccacccaaaacca----------ccacaaacatcaccac |
47518614 |
T |
 |
| Q |
103 |
caagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
||| ||||||||||||| | | |||| |||| ||| ||||||| ||||| ||||||||||| |
|
|
| T |
47518613 |
caaaaaccaccacgagccttaccacaaaagatccaaaatcagcaacaccaagaaaaccacca |
47518552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 23054411 - 23054338
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc |
160 |
Q |
| |
|
||||||||| ||||||||| ||||| ||||||| | |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
23054411 |
ccacaagcaccaccaccaaaaaccatcacgagctccgccacaaaagacccaaaatcagcaccaccatgaaaacc |
23054338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 24957819 - 24957685
Alignment:
| Q |
13 |
aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac |
112 |
Q |
| |
|
|||| ||| |||| |||||||||||| || |||||||||| || ||||||||||||||||||| |||| |||| |||| ||| || ||| |
|
|
| T |
24957819 |
aaactaccattaaccctcaccaaaaaacaacaccagccaccacatgcatcaccaccaaaaacca----------ccacgagcaccaccgtcaaaaatcac |
24957730 |
T |
 |
| Q |
113 |
cacgagcatcatcacagaagacccagtatcagcaccaccatgaaa |
157 |
Q |
| |
|
|||||||| ||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
24957729 |
cacgagcaccatcacaaaagaaccaaaatcagcaccaccatgaaa |
24957685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14441130 - 14441174
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcac |
45 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14441130 |
taaccagcacaaaaaccaccattaatcctcaccaaaaaccagcac |
14441174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 34227236 - 34227172
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
||||||||| |||| ||||||| |||| || |||||||||| ||| ||||||||||| ||||||| |
|
|
| T |
34227236 |
aaaaccaccattaaccctcacctaaaagcaacaccagccaccacgcgcatcaccacccaaaacca |
34227172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 43245522 - 43245562
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttac |
322 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
43245522 |
tcttatacatgaaccatcttagatgacatacacccttttac |
43245562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 54849793 - 54849909
Alignment:
| Q |
283 |
cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat |
382 |
Q |
| |
|
||||||||| ||||| ||||||| | ||||| |||| | | ||||| || |||||||| ||| |||||| ||||||| ||||||| | | || |||| |
|
|
| T |
54849793 |
cttatacatgaaccaccttagatagcgtacacactttgatacccacacgcagttgtgacaagtgacaaaaatattgaaagaagagatgagagaggatgat |
54849892 |
T |
 |
| Q |
383 |
gatgtgatgtgaaatta |
399 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
54849893 |
gatgtgatgtgaaatta |
54849909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 53202209 - 53202241
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagc |
119 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
53202209 |
ccacaagcatcaccaccaaaaaccaccacgagc |
53202241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 23980137 - 23980254
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| | ||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |
|
|
| T |
23980137 |
ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaggggtgagg |
23980236 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
23980237 |
atgtgatgtgaaattact |
23980254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 21590668 - 21590510
Alignment:
| Q |
11 |
aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaacc |
110 |
Q |
| |
|
|||||||||| ||| | |||| |||||||| |||||| ||| |||||||||||||| |||||||||||||| || |||||||| |||||| ||| |||| |
|
|
| T |
21590668 |
aaaaaccaccattagttctcaaaaaaaaccaacaccagtcaccacgagcatcaccacaaaaaaccaacatcagccaccacaagcgtcaccatcaaaaacc |
21590569 |
T |
 |
| Q |
111 |
accacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaa |
169 |
Q |
| |
|
||||||||| || |||| |||||||| ||||||||||||||| |||| ||||||||| |
|
|
| T |
21590568 |
accacgagccccaccacaaaagacccaatatcagcaccaccatagaaactaccacaaaa |
21590510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 5811348 - 5811231
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| | ||| || |||||| ||||| | | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |
|
|
| T |
5811348 |
ttatacataaaccaccataggtggcatacatcctttttcacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaggggtgagg |
5811249 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5811248 |
atgtgatgtgaaattact |
5811231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700070 - 7699951
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
7700070 |
tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga |
7699971 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
7699970 |
tgatatgatataaaattact |
7699951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700268 - 7700149
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
7700268 |
tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga |
7700169 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
7700168 |
tgatatgatataaaattact |
7700149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700466 - 7700347
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
7700466 |
tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga |
7700367 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
7700366 |
tgatatgatataaaattact |
7700347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 7700664 - 7700545
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
7700664 |
tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagataaaaaaggatga |
7700565 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
7700564 |
tgatatgatataaaattact |
7700545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 42221150 - 42221031
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || |||||||| |||||| | ||||||||||||||||| |||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
42221150 |
tcttatacatgaaccaccttaggtggcatacacttttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagatataaaaaggggtga |
42221051 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
42221050 |
tgatatgatgttaaattact |
42221031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 13108154 - 13108270
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| ||||| | ||||||| ||||||| | ||||||||||||||||||||||||||||| |||||| |||||| | |||||||||| | |
|
|
| T |
13108154 |
ttatacataaaccaccttaggcggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacgttgaaagaagaga-tgaaaggggtgagg |
13108252 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
13108253 |
atgtgatgtgaaattact |
13108270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 31148296 - 31148413
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| ||||||| | ||||||||||||||||| ||||||||||||||||| ||||||| |||| |||||||| |
|
|
| T |
31148296 |
ttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacatggcaaaaacattgaaagaagagatgaaaatgggtgatg |
31148395 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
31148396 |
atatgatgtaaaattact |
31148413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 28307682 - 28307563
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||| | ||||| || ||||||| ||||||| | |||||||||||| |||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
28307682 |
tcttatacataaactaccttaggtggcatacacccttttacacccacacacatttgcgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
28307583 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
28307582 |
tgatatgatgtaaaattact |
28307563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 36346751 - 36346633
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
36346751 |
tcttatacataaaccatcttaggtggcatacacccttttacacccagacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa-aggtga |
36346653 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
36346652 |
tgatatgatgtaaaattact |
36346633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 21807509 - 21807390
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| |||||| | |||||| |||||||| |||||||||||| ||||||| ||||||| |||| || ||| |
|
|
| T |
21807509 |
tcttatacatgaaccaccttagatggcatacaccattttacacccacacaaatttgtgatatgtggcaaaaatattgaaagaagagatgaaaatggatga |
21807410 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
21807409 |
tgatgttatgtgaaattact |
21807390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 26972390 - 26972271
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||| ||||| |||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
26972390 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttatgacacgtggcaaaaacattgaaaggagagatgaaaaagggtga |
26972291 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
26972290 |
tgatatgatgtaaaattact |
26972271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 34108430 - 34108549
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||| ||||||| | |||||| ||||||||||| || ||||||||||||| ||||||| |||| |||||| |
|
|
| T |
34108430 |
tcttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacatatgacaaaaacattgaatgaagagatgaaaaagggtga |
34108529 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
34108530 |
tgatatgatgtaaaattact |
34108549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 404
Target Start/End: Original strand, 30887704 - 30887826
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||| ||||||| || ||||||| ||||||| | |||| |||||||||||| || |||||||||||||| ||||||| |||| |||||| |
|
|
| T |
30887704 |
tcttatacatgaacaatcttaggtggcatacacacttttacacccacatacatttgtgacacgtagcaaaaacattgaatgaagagatgaaaaagggtga |
30887803 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattacttaa |
404 |
Q |
| |
|
|||| |||||| ||||||||||| |
|
|
| T |
30887804 |
tgatatgatgtaaaattacttaa |
30887826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31039015 - 31039129
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || ||| ||||||||| |
|
|
| T |
31039015 |
taaccaccacaaaaaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatgagcatcacc |
31039114 |
T |
 |
| Q |
101 |
accaagaaccaccac |
115 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
31039115 |
actaaaaaccaccac |
31039129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 24718022 - 24718127
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| || || |||| ||||||||||| |
|
|
| T |
24718022 |
accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacca-tgaaaaccaacaccaaccaccacgagcatcaccac |
24718120 |
T |
 |
| Q |
103 |
caagaac |
109 |
Q |
| |
|
|| |||| |
|
|
| T |
24718121 |
catgaac |
24718127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 316 - 401
Target Start/End: Complemental strand, 20086781 - 20086696
Alignment:
| Q |
316 |
cttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||| | |||| ||||||| ||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20086781 |
cttttacacccacatacatttgagacatctggcaaaaacattaaaagaagagataaaaaggggtgatgatgtgatgtgaaattact |
20086696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 46475075 - 46475147
Alignment:
| Q |
329 |
acacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
46475075 |
acacatttgtgacatgtaacaaaaacattgaaagaagagatgaaaaggggtgacgatgtgatgtgaaattact |
46475147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 45782847 - 45782728
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||| || |||||| |||||| | ||||||||||||||||| ||| |||||||||||||| ||||||| |||| |||||| |
|
|
| T |
45782847 |
tcttatacatcaaccactttaggtggcatacatcattttacacccacacacatttgtgacacgtgacaaaaacattgaaagaagagatgaaaaagggtga |
45782748 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
45782747 |
tgatatgatgtaaaattact |
45782728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 34828113 - 34828188
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||| ||||| | ||||||| |||||| |||||||| |
|
|
| T |
34828113 |
cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaagtgatgatgatatgatgtaaaattact |
34828188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 38321014 - 38321132
Alignment:
| Q |
283 |
cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgat |
382 |
Q |
| |
|
||||||||| ||||||||||| || ||||||| ||| || | |||| ||| ||||||||||||||||||||||||||| |||| || | | | |||||| |
|
|
| T |
38321014 |
cttatacattaaccatcttaggtggcatacacattttaacacccacatacaattgtgacatgtggcaaaaacattgaaagaagatatgagaggaggtgat |
38321113 |
T |
 |
| Q |
383 |
gatgtgatgtgaaattact |
401 |
Q |
| |
|
| |||||||||||| |||| |
|
|
| T |
38321114 |
ggtgtgatgtgaaagtact |
38321132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 15020288 - 15020402
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| | ||| || |||||| ||||||| | |||| |||||||||||| ||||||||||||||||| |||||| |||||||||| | |
|
|
| T |
15020288 |
ttatacataaaccaccataggtggcatacaaccttttacacccaca--catttgtgacatatggcaaaaacattgaaagaagaga-cgaaaggggtgaag |
15020384 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
15020385 |
atatgatgtgaaattact |
15020402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43047791 - 43047689
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| ||||| |||||||| |||| |||| ||| |||| | |||||||||| || || |||| ||||||| | |
|
|
| T |
43047791 |
taaccaccacaaaaaccaccattaatcctcacaaaaaatcagcaccaaccaccacgaacattacca-cgaaaaccaacaccagccaccacgagcatcatc |
43047693 |
T |
 |
| Q |
101 |
acca |
104 |
Q |
| |
|
|||| |
|
|
| T |
43047692 |
acca |
43047689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 3302445 - 3302518
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||||| || |||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
3302445 |
accaccacaaaaaccaccattaacactcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca |
3302518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 369
Target Start/End: Complemental strand, 42950156 - 42950113
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagat |
369 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
42950156 |
cacacacatttgtgatatgtggcaaatacattgaaaaaagagat |
42950113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 14022940 - 14023057
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| | |
|
|
| T |
14022940 |
ttatacataaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgacaaggggtgacg |
14023039 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14023040 |
atgtgatgtgaaattact |
14023057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 24208450 - 24208567
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||||||||||| ||| || ||||||| |||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||| | |
|
|
| T |
24208450 |
ttatacataaaccatcataggtggtatacactattttacacccacacacatttgtgatatgtggcaaaaacattgaaagaagagatgaaaaagggtgagg |
24208549 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
24208550 |
atgtgatgtgaaattact |
24208567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 3987092 - 3986973
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||| |
|
|
| T |
3987092 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaagggatga |
3986993 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
| || |||||| |||||||| |
|
|
| T |
3986992 |
taatatgatgtaaaattact |
3986973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 13697573 - 13697691
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| | |||| ||||||||||||| ||||||| |||| |||||| |
|
|
| T |
13697573 |
tcttatacataaaccatcttagatgacatgcacccttttacac-catacacatttgtgatacgtggtaaaaacattgaaagaagagatgaaaacgggtga |
13697671 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
13697672 |
tgatatgatataaaattact |
13697691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32747753 - 32747641
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||||||| |||||| |||||| || ||||||||||||||||||||||| || || ||| ||||||||| |
|
|
| T |
32747753 |
taaccaccacaaaaaccaccattacacctcaccaaaaatcagcactagccaccaccagcatcaccaccaaaaaccaacaccagccaccatgagcatcacc |
32747654 |
T |
 |
| Q |
101 |
accaagaaccacc |
113 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
32747653 |
accaaaaaccacc |
32747641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 3118234 - 3118115
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
||||||| || ||||| ||||| || ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| || |||| |||| ||||| |
|
|
| T |
3118234 |
tcttatatatgaaccaccttaggtggcatacacccttttacactcacacacatttgtgacacgtggcaaaaacattgaaagaatagataaaaaagggtgg |
3118135 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
||| |||||| |||||||| |
|
|
| T |
3118134 |
tgacatgatgtaaaattact |
3118115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 15345844 - 15345727
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || |||| |||||||||| | || ||| ||||||||| |||||||||||||||||| || |||| |||| ||||| |
|
|
| T |
15345844 |
tcttatacatcaaccaccttaggtggcatatactcttttacacccataca--tttgtgacacgtggcaaaaacattgaaagaaaagatgaaaaaaggtga |
15345747 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
15345746 |
tgatatgatatcaaattact |
15345727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 30845463 - 30845542
Alignment:
| Q |
23 |
taatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac |
102 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||| || || |||| |||| |||||| |
|
|
| T |
30845463 |
taatcctcaccgaaaacaagcaccagccaacacgagcatcaccatcaaaaactaacaccagccaccacgagcaccaccac |
30845542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 21881411 - 21881479
Alignment:
| Q |
87 |
ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatga |
155 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| || ||| |||||||| |||||||||||||||| |
|
|
| T |
21881411 |
ccacaagcaccaccaccaaaaaccaccacgagtcccacaacaaaagacccaaaatcagcaccaccatga |
21881479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 30432343 - 30432462
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
30432343 |
tcttatacatgaaccaccttagatggcatacacccttttatacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaggggtga |
30432442 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
30432443 |
tgatatgatgtaaaattact |
30432462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 12665348 - 12665468
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagat-taaaaggggtg |
380 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
12665348 |
tcttatacatgaaccaccttaggtggcatacacccttttacactcacacacatttgtaacatgtggcaaaaacattgaaagaagagataaaaaaagggtg |
12665447 |
T |
 |
| Q |
381 |
atgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||| |||||| |||||||| |
|
|
| T |
12665448 |
atgatatgatgtaaaattact |
12665468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 42162602 - 42162721
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | || |||||||||||||| ||| |||||||||||||| ||||||| |||| |||||| |
|
|
| T |
42162602 |
tcttatacatgaaccaccttaggtgtcatacacccttttacacccaaacacatttgtgacacgtgacaaaaacattgaaagaagagatgaaaaagggtga |
42162701 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
42162702 |
tgatatgatgtaaaattact |
42162721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 44081784 - 44081903
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||| ||||||| | ||||||||||||| ||| |||| ||||||||||||| ||||||| |||| |||||| |
|
|
| T |
44081784 |
tcttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtaacacgtggaaaaaacattgaaagaagagatgaaaaagggtga |
44081883 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| | |||| |||||||| |
|
|
| T |
44081884 |
tgatataatgtaaaattact |
44081903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 33726017 - 33726135
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaag-gggtgat |
382 |
Q |
| |
|
|||||||||||||| |||| || ||||||| |||||| | |||| ||||||||||||||||||||||||||||||| ||||||| ||||| || ||| |
|
|
| T |
33726017 |
ttatacataaaccactttaggtggcatacacctttttacacccacaaacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaagtggatgac |
33726116 |
T |
 |
| Q |
383 |
gatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
33726117 |
gatgtgatgtgaaattact |
33726135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 282 - 399
Target Start/End: Original strand, 36189220 - 36189337
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||| ||||||| | |||| |||||||||||| |||||||||| ||||||| ||||||| |||||| |||| |
|
|
| T |
36189220 |
tcttatacatgaaccatcttaggtggcatacacccttttacacccacatacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaaggagtga |
36189319 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaatta |
399 |
Q |
| |
|
|||| |||| | |||||| |
|
|
| T |
36189320 |
tgatatgatataaaatta |
36189337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15050199 - 15050124
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||||| ||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15050199 |
taaccaccacaaaaaccatcattaatcctcaccaaaaactagcaccagccaccacgagcatcaccaccaaaaacca |
15050124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 31318853 - 31318928
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||| |||||| |||||||| |
|
|
| T |
31318853 |
cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact |
31318928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25142917 - 25143031
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| |||||| |||| || |||||||| |||| ||||||||||||| ||||| |||||||||||||| ||||| || || ||| ||||||||| |
|
|
| T |
25142917 |
taaccaccacaaaaatcaccactactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaatcaacaccaaccaccatgagcatcacc |
25143016 |
T |
 |
| Q |
101 |
accaagaaccaccac |
115 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
25143017 |
accaaaaaccaccac |
25143031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 10203668 - 10203787
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||| ||||||| ||||||||||||||||| ||| |||||| ||||||| ||||||| |||| ||||| |
|
|
| T |
10203668 |
tcttatacatgaaccaccttaggtgacatacatccttttacatccacacacatttgtgacacgtgacaaaaatattgaaagaagagatgaaaaagggtgg |
10203767 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
10203768 |
tgatatgatataaaattact |
10203787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 15050170 - 15050070
Alignment:
| Q |
65 |
caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
|||||||||| | || || || |||| |||||||||||||| |||||||||||||| || |||| |||||| |||| |||||||||||| ||||||||| |
|
|
| T |
15050170 |
caccaaaaactagcaccagccaccacgagcatcaccaccaaaaaccaccacgagcaccaccacaaaagacctagtaccagcaccaccattgaaaccacca |
15050071 |
T |
 |
| Q |
165 |
c |
165 |
Q |
| |
|
| |
|
|
| T |
15050070 |
c |
15050070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 18184557 - 18184676
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
||||||| || ||||| |||| |||||||||| ||||||| |||||| |||||||||| |||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
18184557 |
tcttatatatgaaccaccttaagtgacatacacccttttacatccacacatatttgtgacacgtggtgaaaacattgaatgaagagatgaaaaggggtga |
18184656 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
18184657 |
tgatatgatataaaattact |
18184676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 43186031 - 43186150
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||| || |||| |||||||||| | ||||||||||||| |||||||||||||||||||| || |||| |||| ||||| |
|
|
| T |
43186031 |
tcttatacatcaaccactttaggtggcatatactcttttacacctgcacacatttgtgatatgtggcaaaaacattgaaagaaaagatgaaaaaaggtga |
43186130 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||| | |||||||| |
|
|
| T |
43186131 |
tgatatgatataaaattact |
43186150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 5515298 - 5515367
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaa |
72 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||| ||| |||| |
|
|
| T |
5515298 |
accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccaaccaccacgagcatcatcacgaaaa |
5515367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23635866 - 23635931
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcacca |
66 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||| |
|
|
| T |
23635866 |
taacctccacaaaaaccaccattaatcctcaccaaaaatcagcaccagcctccacgagcatcacca |
23635931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 38845165 - 38845091
Alignment:
| Q |
326 |
cacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||||||| ||||||||||||| ||||| ||||||| || |||| || |||||||||||||||||| ||||||||| |
|
|
| T |
38845165 |
cacacacaattgtgacatgtggaaaaaatattgaaagaaaagat-aagaggggtgatgatgtgatgagaaattact |
38845091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 31622 - 31547
Alignment:
| Q |
294 |
accatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagat |
369 |
Q |
| |
|
|||||||||| | ||||||| |||| || | |||| ||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31622 |
accatcttaggtagcatacacactttgacacccacatacaattgtgacatgtggcaaaaacattgaaagaagagat |
31547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 10408720 - 10408793
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||| ||||||||||| |||| |||||| |||| || |||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
10408720 |
accaccacaaaaaccaccattaactctcacctaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca |
10408793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 6443925 - 6444057
Alignment:
| Q |
22 |
ttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcat |
121 |
Q |
| |
|
|||| ||||| |||||| || || ||||||| | ||||||||||||||||||||| |||| |||| ||||||||| |||||| |||||| |
|
|
| T |
6443925 |
ttaaccctcatcaaaaaacaacaacagccaccatgagcatcaccaccaaaaacca----------ccacgagcaccaccaccaa-aaccacttcgagcac |
6444013 |
T |
 |
| Q |
122 |
catcacagaagacccagtatcagcaccaccatgaaaaccaccac |
165 |
Q |
| |
|
|| |||| |||||||| |||||| ||||||||||||||||||| |
|
|
| T |
6444014 |
caccacaaaagacccaaaatcagccccaccatgaaaaccaccac |
6444057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23635818 - 23635864
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcacca |
47 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
23635818 |
taacctccacaaaaaccaccattaatcctcaccaaaaatcagcacca |
23635864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 401
Target Start/End: Complemental strand, 42668951 - 42668850
Alignment:
| Q |
299 |
cttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatt |
398 |
Q |
| |
|
||||| || ||||||| |||| || | |||||||| |||||||| |||||||||||||| ||| |||| | | | || ||||||| | |||||||||||| |
|
|
| T |
42668951 |
cttaggtggcatacacactttgacacccacacacaattgtgacacgtggcaaaaacattaaaagaagata-tgagagaggtgatggtatgatgtgaaatt |
42668853 |
T |
 |
| Q |
399 |
act |
401 |
Q |
| |
|
||| |
|
|
| T |
42668852 |
act |
42668850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 46112131 - 46112012
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
46112131 |
tcttatacatgaaccatcttaggtgacatacaccattttacatccacacacatttgtgacatgtggcaaaaacattgaaagaagagatgaaaaagggtga |
46112032 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
46112031 |
tgatatgatgtaaaattact |
46112012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 21559565 - 21559684
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||||||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||| ||||||| ||||||| |||| |||| | |
|
|
| T |
21559565 |
tcttatacataaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaatattgaaagaagagatgaaaaagggtaa |
21559664 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
21559665 |
tgatatgatgtaaaattact |
21559684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 36749410 - 36749529
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||| |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
36749410 |
tcttatacatgaaccaccttagatgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
36749509 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
36749510 |
tgatatgatgtaaaattact |
36749529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 39467286 - 39467169
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||| ||||||||| | |||||||||||||| ||||||| | |||||| |||||||||||||| |||||| ||||||| ||||||| ||||||||||| | |
|
|
| T |
39467286 |
ttatccataaaccaccatagatgacatacacccttttacacccacacatatttgtgacatgtgccaaaaatattgaaagaagagatgaaaaggggtgagg |
39467187 |
T |
 |
| Q |
384 |
atgtgatgtgaaattact |
401 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
39467186 |
atgtgatatgaaattact |
39467169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 34750085 - 34749966
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | |||||| |||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
34750085 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacatatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
34749986 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
34749985 |
tgatatgatgtaaaattact |
34749966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 36370525 - 36370406
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| |||||| | ||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| |
|
|
| T |
36370525 |
tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacatgtgacaaaaacattgaaagaagagatgaaaaagggtga |
36370426 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
36370425 |
tgatatgatgtaaaattact |
36370406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 43999993 - 44000112
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| |||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
43999993 |
tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
44000092 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
44000093 |
tgatatgatgtaaaattact |
44000112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 39072458 - 39072350
Alignment:
| Q |
284 |
ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatg |
383 |
Q |
| |
|
|||||||| || || |||||||||||||||| ||||||| | |||| ||||||||||||||||||| ||||||| ||| ||||||| |||| |||||||| |
|
|
| T |
39072458 |
ttatacatgaatcaccttagatgacatacacccttttacacccacatacatttgtgacatgtggcataaacattaaaagaagagatgaaaatgggtgatg |
39072359 |
T |
 |
| Q |
384 |
atgtgatgt |
392 |
Q |
| |
|
||||||||| |
|
|
| T |
39072358 |
atgtgatgt |
39072350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 22894684 - 22894803
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||| |
|
|
| T |
22894684 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaaggatga |
22894783 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| ||||||| |
|
|
| T |
22894784 |
tgatatgatgtataattact |
22894803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 51339968 - 51339851
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||||||||| ||||| || |||||| ||||||| | |||||| ||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
51339968 |
tcttatacataaaccaccttaggtggcatacatccttttacacccacaca--tttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
51339871 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
51339870 |
tgatatgatgtaaaattact |
51339851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 30735682 - 30735564
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
||||||| || ||||| |||||||| ||||||| ||||||| | ||||||||| ||||||| |||||||||||||||||| |||| | ||||| |||||| |
|
|
| T |
30735682 |
tcttatatatgaaccaccttagatggcatacacccttttacacccacacacatctgtgacacgtggcaaaaacattgaaagaagata-taaaaagggtga |
30735584 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattact |
401 |
Q |
| |
|
|||| |||||| |||||||| |
|
|
| T |
30735583 |
tgatatgatgttaaattact |
30735564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 29460664 - 29460756
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa |
374 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
29460664 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacattgaaagaagagatgaaaa |
29460756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 374
Target Start/End: Original strand, 29471516 - 29471608
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa |
374 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
29471516 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacattgaaagaagagatgaaaa |
29471608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 38231297 - 38231381
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaaga |
366 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38231297 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacattgaaagaaga |
38231381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31699233 - 31699333
Alignment:
| Q |
1 |
taaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcacc |
100 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| | | |||||||||| || || |||| |||| |||| |
|
|
| T |
31699233 |
taaccaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacta-cgaaaaccaacaccagccaccacgagcaccacc |
31699331 |
T |
 |
| Q |
101 |
ac |
102 |
Q |
| |
|
|| |
|
|
| T |
31699332 |
ac |
31699333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 37067076 - 37067129
Alignment:
| Q |
228 |
accccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcgg |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37067076 |
accccaaccataattcttgcaaagtaacccatgttttgtagctccagctggcgg |
37067129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 20856334 - 20856221
Alignment:
| Q |
286 |
atacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgat |
385 |
Q |
| |
|
|||||| ||||| |||| || ||||||| ||||||| | || ||||||||||||||||||||||||||||||| |||||| | ||||| || ||||||| |
|
|
| T |
20856334 |
atacatgaaccactttaggtggcatacacccttttacacccatacacatttgtgacatgtggcaaaaacattga-aaaagata-taaaaaggatgatgat |
20856237 |
T |
 |
| Q |
386 |
gtgatgtgaaattact |
401 |
Q |
| |
|
||||| | |||||||| |
|
|
| T |
20856236 |
gtgatataaaattact |
20856221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 53638165 - 53638255
Alignment:
| Q |
308 |
catacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtgatgatgtgatgtgaaatt |
398 |
Q |
| |
|
||||||| |||| || | |||||||| | ||||||||||| |||||||| |||| ||||||| | | |||||||||||||||||| ||||| |
|
|
| T |
53638165 |
catacaccctttaacacccacacacaatcgtgacatgtggtaaaaacatggaaagaagagatgagagggggtgatgatgtgatgtaaaatt |
53638255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 18269948 - 18269875
Alignment:
| Q |
3 |
accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca |
76 |
Q |
| |
|
|||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
18269948 |
accaccacaaaaaccaccattaaccatcactaaaaaacaacaccagccaccacgcgcatcaccaccaaaaacca |
18269875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 31699315 - 31699373
Alignment:
| Q |
109 |
ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa |
167 |
Q |
| |
|
|||||||||||| || |||| |||||||| || || |||||||||| |||||||||||| |
|
|
| T |
31699315 |
ccaccacgagcaccaccacaaaagacccaataccaacaccaccatggaaaccaccacaa |
31699373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 29820483 - 29820390
Alignment:
| Q |
285 |
tatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaagggg |
378 |
Q |
| |
|
|||||||| |||| ||||| || ||||||| |||| || | |||| ||| |||||| |||| ||||||||||| ||| ||||||| | |||||| |
|
|
| T |
29820483 |
tatacatagaccaccttaggtggcatacacactttgacacccacatacaattgtgagatgtagcaaaaacattaaaagaagagatgagaagggg |
29820390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 18269863 - 18269807
Alignment:
| Q |
108 |
accaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca |
164 |
Q |
| |
|
|||||||||||| || |||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
18269863 |
accaccacgagccccaccacaaaagacccaaaatcaacaccaccatgaaaaccacca |
18269807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0062 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0062
Description:
Target: scaffold0062; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 282 - 404
Target Start/End: Original strand, 6722 - 6844
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaaggggtga |
381 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
6722 |
tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaaagggtga |
6821 |
T |
 |
| Q |
382 |
tgatgtgatgtgaaattacttaa |
404 |
Q |
| |
|
|||| |||||| ||||||||||| |
|
|
| T |
6822 |
tgatatgatgtaaaattacttaa |
6844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 23272 - 23348
Alignment:
| Q |
92 |
agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa |
168 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || |||| |||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
23272 |
agcatcacaaccaaaaaccaccacgagcaccaccacaaaagacctagtatcagcaccaccatggaaaccaccacaaa |
23348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 87350 - 87259
Alignment:
| Q |
282 |
tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacattgaaaaaagagattaaaa |
374 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||||| ||| ||| | ||||||||||||||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
87350 |
tcttatacatgaaccaccttaggtggcatacacccttgtacac-cacacacatttgtgacacgtggcaaaaacattgaaagaagagatgaaaa |
87259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2963 - 3021
Alignment:
| Q |
12 |
aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaa |
70 |
Q |
| |
|
|||| |||| ||| |||||||||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
2963 |
aaaatcaccattactcctcaccaaaaaccagcaccaaccaccacgagcttcaccaccaa |
3021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 42912 - 42826
Alignment:
| Q |
57 |
agcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatca |
143 |
Q |
| |
|
|||||||||||||||||| |||| ||||| ||| |||||||| |||| |||||||||||| | || |||| || ||| ||||||| |
|
|
| T |
42912 |
agcatcaccaccaaaaactaacaccatccatcacgcgcatcaccgccaaaaaccaccacgagtaccaccacaaaaaacctagtatca |
42826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0725 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0725
Description:
Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 1080 - 1121
Alignment:
| Q |
11 |
aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac |
52 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
1080 |
aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac |
1121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 26996 - 27037
Alignment:
| Q |
11 |
aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac |
52 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
26996 |
aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac |
27037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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