View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16949_low_6 (Length: 255)

Name: NF16949_low_6
Description: NF16949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16949_low_6
NF16949_low_6
[»] scaffold0170 (1 HSPs)
scaffold0170 (11-255)||(34123-34367)
[»] scaffold0302 (2 HSPs)
scaffold0302 (11-255)||(7191-7435)
scaffold0302 (11-254)||(250-493)
[»] chr6 (18 HSPs)
chr6 (11-255)||(1646980-1647224)
chr6 (11-255)||(16380539-16380783)
chr6 (11-255)||(16648135-16648379)
chr6 (11-255)||(23998119-23998363)
chr6 (11-248)||(14130347-14130584)
chr6 (11-255)||(16099880-16100130)
chr6 (133-255)||(23026013-23026135)
chr6 (11-106)||(23025912-23026007)
chr6 (109-254)||(19881170-19881315)
chr6 (194-255)||(18836257-18836318)
chr6 (167-254)||(23080341-23080428)
chr6 (112-254)||(28281080-28281222)
chr6 (124-254)||(34643865-34643995)
chr6 (169-254)||(19487596-19487681)
chr6 (87-158)||(14643726-14643797)
chr6 (167-254)||(18196055-18196142)
chr6 (172-254)||(23086098-23086180)
chr6 (169-254)||(25769716-25769801)
[»] chr1 (14 HSPs)
chr1 (11-255)||(20927076-20927320)
chr1 (11-255)||(20829485-20829729)
chr1 (11-255)||(41215949-41216193)
chr1 (11-183)||(20527147-20527319)
chr1 (37-251)||(21200998-21201212)
chr1 (19-125)||(22133857-22133963)
chr1 (11-80)||(35930918-35930987)
chr1 (109-252)||(20834091-20834234)
chr1 (112-251)||(20854954-20855093)
chr1 (169-254)||(21838973-21839058)
chr1 (67-254)||(21743701-21743888)
chr1 (169-254)||(31538248-31538333)
chr1 (169-254)||(48424927-48425012)
chr1 (169-254)||(52987795-52987880)
[»] chr3 (26 HSPs)
chr3 (11-254)||(15611740-15611983)
chr3 (11-255)||(8272659-8272903)
chr3 (11-255)||(30139442-30139686)
chr3 (11-255)||(30148993-30149237)
chr3 (11-254)||(6151113-6151356)
chr3 (11-253)||(13965612-13965855)
chr3 (11-255)||(15948730-15948974)
chr3 (11-255)||(25767954-25768198)
chr3 (109-254)||(14088310-14088455)
chr3 (109-254)||(11950255-11950400)
chr3 (109-254)||(13970467-13970612)
chr3 (173-252)||(55498491-55498570)
chr3 (112-254)||(13943661-13943803)
chr3 (112-254)||(44778884-44779026)
chr3 (109-254)||(11889638-11889783)
chr3 (199-250)||(6710865-6710916)
chr3 (109-254)||(15261257-15261402)
chr3 (169-254)||(15723352-15723437)
chr3 (112-254)||(12358877-12359019)
chr3 (112-254)||(16379278-16379420)
chr3 (169-250)||(15340900-15340981)
chr3 (169-250)||(15400935-15401016)
chr3 (109-194)||(18132693-18132778)
chr3 (169-254)||(28755955-28756040)
chr3 (130-158)||(16880086-16880114)
chr3 (109-153)||(17188112-17188156)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-255)||(6953-7197)
[»] chr5 (10 HSPs)
chr5 (11-254)||(23507606-23507849)
chr5 (11-255)||(21935391-21935635)
chr5 (11-255)||(24583131-24583375)
chr5 (109-254)||(21409074-21409219)
chr5 (109-254)||(21679079-21679224)
chr5 (112-254)||(17267638-17267780)
chr5 (169-251)||(22463876-22463958)
chr5 (169-254)||(29474434-29474519)
chr5 (112-198)||(20777891-20777977)
chr5 (109-254)||(21562325-21562470)
[»] scaffold0021 (3 HSPs)
scaffold0021 (11-245)||(21871-22105)
scaffold0021 (11-245)||(31447-31681)
scaffold0021 (73-255)||(7252-7434)
[»] scaffold0876 (1 HSPs)
scaffold0876 (11-255)||(970-1214)
[»] scaffold0225 (1 HSPs)
scaffold0225 (11-255)||(25432-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-255)||(14946-15190)
scaffold0162 (11-255)||(11198-11442)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-255)||(26290-26534)
[»] scaffold0076 (2 HSPs)
scaffold0076 (11-255)||(42296-42540)
scaffold0076 (109-254)||(31799-31944)
[»] chr8 (15 HSPs)
chr8 (11-255)||(16875559-16875803)
chr8 (11-255)||(21848801-21849045)
chr8 (11-255)||(22436376-22436620)
chr8 (11-255)||(20650819-20651063)
chr8 (11-255)||(23155506-23155748)
chr8 (11-254)||(21195004-21195246)
chr8 (28-250)||(23902242-23902464)
chr8 (34-117)||(16414302-16414385)
chr8 (112-254)||(31569407-31569549)
chr8 (109-252)||(21323841-21323984)
chr8 (167-254)||(22988804-22988891)
chr8 (169-254)||(20390173-20390258)
chr8 (67-155)||(19869866-19869954)
chr8 (178-254)||(22131672-22131748)
chr8 (178-254)||(32602219-32602295)
[»] chr7 (24 HSPs)
chr7 (11-255)||(7825896-7826140)
chr7 (11-255)||(27105804-27106048)
chr7 (11-255)||(27172277-27172521)
chr7 (11-250)||(17925651-17925890)
chr7 (11-255)||(4441924-4442168)
chr7 (11-250)||(13458036-13458275)
chr7 (11-158)||(13378978-13379123)
chr7 (26-251)||(15716948-15717173)
chr7 (59-250)||(17143354-17143545)
chr7 (109-254)||(19614673-19614818)
chr7 (112-254)||(14139677-14139819)
chr7 (112-254)||(23503979-23504121)
chr7 (109-254)||(48813380-48813525)
chr7 (109-245)||(11386535-11386671)
chr7 (112-254)||(18052062-18052204)
chr7 (109-254)||(13675450-13675595)
chr7 (109-254)||(19149209-19149354)
chr7 (109-254)||(20748608-20748753)
chr7 (170-254)||(11770430-11770514)
chr7 (169-254)||(13023355-13023440)
chr7 (67-155)||(39232-39320)
chr7 (109-254)||(15100709-15100854)
chr7 (169-254)||(26092964-26093049)
chr7 (169-254)||(49154299-49154384)
[»] scaffold0120 (1 HSPs)
scaffold0120 (11-254)||(24215-24458)
[»] chr2 (18 HSPs)
chr2 (11-252)||(24829749-24829990)
chr2 (11-255)||(25130247-25130491)
chr2 (11-255)||(24568229-24568473)
chr2 (11-254)||(22760130-22760373)
chr2 (6-254)||(22279744-22279992)
chr2 (58-251)||(10037940-10038133)
chr2 (58-251)||(10098325-10098518)
chr2 (109-245)||(23098677-23098813)
chr2 (112-254)||(27789379-27789521)
chr2 (112-254)||(12575992-12576134)
chr2 (109-254)||(23112375-23112520)
chr2 (109-254)||(30010843-30010988)
chr2 (109-252)||(23278417-23278560)
chr2 (173-254)||(24818953-24819034)
chr2 (112-252)||(24950231-24950371)
chr2 (172-251)||(27208894-27208973)
chr2 (169-254)||(1065390-1065475)
chr2 (178-254)||(23189557-23189633)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-255)||(16096-16340)
[»] scaffold1488 (1 HSPs)
scaffold1488 (11-254)||(827-1069)
[»] scaffold0467 (1 HSPs)
scaffold0467 (11-254)||(1645-1888)
[»] scaffold0092 (1 HSPs)
scaffold0092 (26-255)||(145-374)
[»] chr4 (12 HSPs)
chr4 (11-255)||(15291179-15291423)
chr4 (37-250)||(12340912-12341125)
chr4 (112-254)||(51604914-51605056)
chr4 (169-245)||(8322955-8323031)
chr4 (172-254)||(14696121-14696203)
chr4 (169-254)||(14301898-14301983)
chr4 (169-254)||(15001544-15001629)
chr4 (118-254)||(8707919-8708055)
chr4 (169-254)||(3262973-3263058)
chr4 (109-254)||(15323225-15323370)
chr4 (169-254)||(40475048-40475133)
chr4 (169-254)||(44660045-44660130)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-254)||(7885-8128)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-255)||(5830-6076)
[»] scaffold0218 (2 HSPs)
scaffold0218 (11-251)||(1976-2216)
scaffold0218 (15-210)||(26410-26605)
[»] scaffold0008 (3 HSPs)
scaffold0008 (11-254)||(132513-132756)
scaffold0008 (11-122)||(25938-26049)
scaffold0008 (177-253)||(25866-25942)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-236)||(7029-7254)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-254)||(8850-9093)
[»] scaffold0692 (1 HSPs)
scaffold0692 (11-225)||(1908-2122)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-149)||(6888-7026)
[»] scaffold0462 (1 HSPs)
scaffold0462 (11-115)||(2117-2221)
[»] scaffold0635 (1 HSPs)
scaffold0635 (58-251)||(8937-9130)
[»] scaffold0028 (1 HSPs)
scaffold0028 (109-254)||(48636-48781)
[»] scaffold0730 (1 HSPs)
scaffold0730 (109-254)||(123-268)
[»] scaffold0083 (1 HSPs)
scaffold0083 (109-254)||(9156-9301)
[»] scaffold0719 (1 HSPs)
scaffold0719 (33-84)||(4796-4847)
[»] scaffold0029 (1 HSPs)
scaffold0029 (109-254)||(114598-114743)
[»] scaffold1208 (1 HSPs)
scaffold1208 (109-212)||(1811-1914)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-69)||(13649-13707)
[»] scaffold0058 (2 HSPs)
scaffold0058 (128-254)||(27389-27515)
scaffold0058 (109-226)||(76490-76614)
[»] scaffold0090 (2 HSPs)
scaffold0090 (109-254)||(20888-21033)
scaffold0090 (109-254)||(25050-25195)
[»] scaffold0011 (1 HSPs)
scaffold0011 (109-254)||(24655-24800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (113-254)||(201594-201735)
[»] scaffold2111 (1 HSPs)
scaffold2111 (109-164)||(709-764)
[»] scaffold0293 (1 HSPs)
scaffold0293 (167-254)||(14507-14594)
[»] scaffold0206 (1 HSPs)
scaffold0206 (172-251)||(25155-25234)
[»] scaffold0108 (1 HSPs)
scaffold0108 (67-254)||(49143-49330)
[»] scaffold0040 (1 HSPs)
scaffold0040 (107-254)||(16916-17063)
[»] scaffold0007 (1 HSPs)
scaffold0007 (127-254)||(84659-84786)
[»] scaffold0001 (1 HSPs)
scaffold0001 (167-254)||(495057-495144)
[»] scaffold0239 (1 HSPs)
scaffold0239 (112-254)||(10911-11053)
[»] scaffold0080 (1 HSPs)
scaffold0080 (172-254)||(11424-11506)
[»] scaffold0585 (1 HSPs)
scaffold0585 (109-254)||(5211-5356)
[»] scaffold0454 (1 HSPs)
scaffold0454 (169-254)||(8977-9062)
[»] scaffold0298 (1 HSPs)
scaffold0298 (109-254)||(10179-10324)
[»] scaffold0149 (2 HSPs)
scaffold0149 (169-254)||(5532-5617)
scaffold0149 (169-254)||(9963-10048)
[»] scaffold0104 (1 HSPs)
scaffold0104 (169-254)||(24253-24338)
[»] scaffold0079 (1 HSPs)
scaffold0079 (109-254)||(2755-2900)
[»] scaffold0018 (2 HSPs)
scaffold0018 (173-254)||(10927-11008)
scaffold0018 (173-254)||(17119-17200)
[»] scaffold0016 (1 HSPs)
scaffold0016 (109-254)||(176466-176611)
[»] scaffold0405 (1 HSPs)
scaffold0405 (67-227)||(566-726)
[»] scaffold0072 (1 HSPs)
scaffold0072 (124-252)||(53086-53214)
[»] scaffold0037 (1 HSPs)
scaffold0037 (178-254)||(115172-115248)
[»] scaffold0647 (1 HSPs)
scaffold0647 (167-254)||(2938-3025)
[»] scaffold0126 (1 HSPs)
scaffold0126 (169-252)||(42958-43041)
[»] scaffold0017 (1 HSPs)
scaffold0017 (167-254)||(195667-195754)
[»] scaffold0379 (1 HSPs)
scaffold0379 (112-254)||(6014-6156)
[»] scaffold0309 (1 HSPs)
scaffold0309 (172-238)||(16696-16762)
[»] scaffold0270 (2 HSPs)
scaffold0270 (172-254)||(5910-5992)
scaffold0270 (172-254)||(13040-13122)
[»] scaffold0190 (1 HSPs)
scaffold0190 (169-255)||(31501-31587)
[»] scaffold0054 (1 HSPs)
scaffold0054 (112-254)||(64633-64775)
[»] scaffold1830 (1 HSPs)
scaffold1830 (109-254)||(1033-1178)
[»] scaffold0827 (1 HSPs)
scaffold0827 (67-140)||(5259-5332)
[»] scaffold0404 (1 HSPs)
scaffold0404 (169-254)||(6789-6874)
[»] scaffold0261 (2 HSPs)
scaffold0261 (169-254)||(13518-13603)
scaffold0261 (169-254)||(21697-21782)
[»] scaffold0089 (1 HSPs)
scaffold0089 (169-254)||(14895-14980)
[»] scaffold0026 (1 HSPs)
scaffold0026 (109-254)||(50849-50994)
[»] scaffold0010 (1 HSPs)
scaffold0010 (169-254)||(40515-40600)
[»] scaffold0476 (1 HSPs)
scaffold0476 (109-153)||(1667-1711)
[»] scaffold0348 (1 HSPs)
scaffold0348 (109-153)||(9996-10040)
[»] scaffold0139 (1 HSPs)
scaffold0139 (109-245)||(37696-37832)


Alignment Details
Target: scaffold0170 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 34367 - 34123
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||| |||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 34168  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  34167 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 181; Significance: 7e-98; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 7435 - 7191
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||| ||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||| || ||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 7236  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  7235 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 7191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 493 - 250
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||| ||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||| || ||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 294  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  293 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 181; Significance: 7e-98; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 1646980 - 1647224
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaag 1647179  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    | |||||||||||||||||| ||||||||||||||||||||||||    
T  1647180 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 1647224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 16380539 - 16380783
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16380738  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  16380739 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 16380783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 16648135 - 16648379
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16648334  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  16648335 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 16648379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 23998363 - 23998119
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||  |||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaag 23998164  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    || ||||||||||||||||| |||||||||||||||||| |||||    
T  23998163 tccgaggaagagcatgctgaacatttgaggattgtgttgtaagtc 23998119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 14130584 - 14130347
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||| |||||||| |||||||| |||||||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    || || ||||||||||||||| ||||||||||||| ||||||||||||  | ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaag 14130385  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgtt 248  Q
    | |||||| ||||||||||| |||||||||||||||||    
T  14130384 tttgaggaggagcatgctgagcatttgaggattgtgtt 14130347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 16100130 - 16099880
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||| | ||||||||||||||||||||||||   |||| |||||||||||||| |||||||||||| |||| |||||||||||||| || ||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  111 tgcgccaggtgtcttcat------ggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtat 204  Q
    || |||||||||||| ||      ||||||||||||||||||||||||||| ||  | ||| ||||||||||||||||||||||||||| ||||||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtat 16099931  T
Q  205 tcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    ||||||||| |||| ||||| ||||| ||||| ||||||||||||||||||    
T  16099930 tcgaagtctaaggaggagcacgctgagcatttaaggattgtgttgcaagtc 16099880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 255
Target Start/End: Original strand, 23026013 - 23026135
Alignment:
Q  133 tatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgacc 232  Q
    |||||||||||||||||||||||||   |  || ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||   |    
T  23026013 tatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgaggaggagcatgcttcgc 23026112  T
Q  233 atttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||| ||||    
T  23026113 atttgaggattgtgttgcgagtc 23026135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtat 106  Q
    |||||||||||||| ||||||||||||||||||||||||   |||  |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 19881315 - 19881170
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||||||||||||||| || |||||| ||||||| ||    |||||||| ||||| || ||||| |||||| | |||||||    
T  19881315 aatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattcga 19881216  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| |||||||||| ||||||||    
T  19881215 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagt 19881170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 18836257 - 18836318
Alignment:
Q  194 ttttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 18836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 23080428 - 23080341
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| ||||| || |||||||||||| | || || |||||||||||||| |||||||| ||||||| |||||| ||||||||    
T  23080428 gtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaacatgctgagcatttgaagattgttttgcaagt 23080341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 28281080 - 28281222
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||| ||| || | |||||||||     
T  28281080 gcgccgggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 28281179  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| | ||||||||| || ||| |||| ||||||||||||||    
T  28281180 ctgaaggagagcatgcagaacatctgagaattgtgttgcaagt 28281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 34643865 - 34643995
Alignment:
Q  124 ttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 223  Q
    ||||||||||||||||||||||| |||||| |||| || ||    |||||||| ||||  || ||||| |||||| | |||||||   | ||||||||||    
T  34643865 ttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagc 34643964  T
Q  224 atgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| || ||| | || ||||||||||||||    
T  34643965 atgcagaacatctaagaattgtgttgcaagt 34643995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 19487596 - 19487681
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| || ||||| ||||| || ||| | ||||| |||||||| ||||||||||| || ||||| | |||||||||||||||    
T  19487596 tttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagt 19487681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 14643726 - 14643797
Alignment:
Q  87 tgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctta 158  Q
    ||||||||||||||| ||  |  ||||||  |||||||||||||| |||||||||||||| || ||||||||    
T  14643726 tgtgatgccatttggtgttactgatgcgcatggtgtcttcatggaatatatgaatagaatcttccatcctta 14643797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 18196055 - 18196142
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||| ||||| ||  ||||||||||| | || || ||||| || |||||||||||| | ||||||| |||||| ||||||||    
T  18196055 gttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagt 18196142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 23086098 - 23086180
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||| || |||||||||||| | || || |||| ||| ||||| |||||||| ||||||| |||||| ||||||||    
T  23086098 gtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 25769801 - 25769716
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||||||  |  | ||||| |||| ||| ||||||||||| || ||| ||| |||||||||||||||    
T  25769801 tttgtggttgtgtttattgatgatatcctaatttattctaagtatgaagaagagcatgcagagcatctgaagattgtgttgcaagt 25769716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 7e-98; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 20927320 - 20927076
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaag 20927121  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  20927120 tctgaggaagagcatgatgagcatttgaggattgtgttgcaagtc 20927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 20829485 - 20829729
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 20829684  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  20829685 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 20829729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 41215949 - 41216193
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||  || ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaag 41216148  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  41216149 tctgaggaggagcatgctgagcatttgaggattgtgttgcgagtc 41216193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 20527319 - 20527147
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||| ||||||| ||||||| ||||||| |||||||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgttt 183  Q
    ||| ||||||||||| || || || ||||||||||||||||||||||| || ||| |||||||||||||||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 21200998 - 21201212
Alignment:
Q  37 gatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtata 136  Q
    |||||||||||||  |||||||||||||| ||||| |||||||| |||  ||||||||||||| | ||  | ||| ||||  ||||||||||||| ||||    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  137 tgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccattt 236  Q
    |||||||||||||||||||||| ||  |||| ||||||| ||  |||||||||||||| ||||||||||||||||  ||||| ||||||| | | ||| |    
T  21201098 tgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatct 21201197  T
Q  237 gaggattgtgttgca 251  Q
    |||||||||||||||    
T  21201198 gaggattgtgttgca 21201212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  19 attagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccag 118  Q
    |||||| | |||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  119 gtgtctt 125  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatga 80  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 20834091 - 20834234
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||  ||||| |||||||||||||||||  |||| || ||| ||||||| ||    || ||||| |||||||| ||||||||| || | ||||| |    
T  20834091 aatgcgcgtggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattcaa 20834190  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    || |||| ||||| ||||| || ||||||| |||||||||||||    
T  20834191 agactgaagaagaacatgcagaacatttgaagattgtgttgcaa 20834234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 251
Target Start/End: Original strand, 20854954 - 20855093
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| |||  || ||    ||||||||||| |||||||||||||||||| | ||||| ||      
T  20854954 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatattttgatttattctaaaa 20855053  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |||| || |||||||| || || |||| ||||||||||||    
T  20855054 ctgaagaggagcatgcagaacacttgaagattgtgttgca 20855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 21839058 - 21838973
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  21839058 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 21838973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 21743701 - 21743888
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagact 166  Q
    ||||| |||||||| ||| | |||||||| || || ||  | |||||||| ||||| || |||||||||||||| ||||| || ||| |||| || ||      
T  21743701 tatggtcactatgaatataaggtgatgcctttcggtgttactaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggata 21743800  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
      |||||||| |||||||| ||| | || ||  | ||||| ||| |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  21743801 aatttgtggttgtgtttattgatcacatcttaatttattctaagactgaagaagagcatgcagagcatctgaagattgtattgcaagt 21743888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 31538248 - 31538333
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  31538248 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 31538333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 48425012 - 48424927
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  48425012 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 48424927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 52987880 - 52987795
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  52987880 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 52987795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 3e-97; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 15611983 - 15611740
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 15611784  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  15611783 tctgaggaagagcatgctgagcatttgaggattgtcttgcaagt 15611740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 8272659 - 8272903
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 8272858  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  8272859 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 8272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 30139686 - 30139442
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30139487  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  30139486 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 30139442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 30149237 - 30148993
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30149038  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  30149037 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 30148993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 6151113 - 6151356
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||| ||||||||||||||||  | |||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||     
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 6151312  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||||||||| ||| ||| |||||||||||||||    
T  6151313 tctgaggaggagcatgctgagcatctgacgattgtgttgcaagt 6151356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 13965612 - 13965855
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 13965811  T
Q  211 tctgaggaag-agcatgctgaccatttgaggattgtgttgcaag 253  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  13965812 tctgaggaagaagcatgctgagcatttgaggattgtgttgcaag 13965855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 15948730 - 15948974
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||  | ||| | ||||||||||| || |||||||||||||||||||||||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaag 15948929  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||    
T  15948930 tctgaggaagagcatgttgagcatctgaggattgtgttgcaagtc 15948974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 25768198 - 25767954
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||| || || ||||||||||||| |||||||| ||| |||||||| ||||||||||||  |||||||||||| |||||||| ||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| ||     
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaa 25767999  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||| | ||||||||||| |||||||||||| |||||||||||    
T  25767998 tctgagaaggagcatgctgagcatttgaggattatgttgcaagtc 25767954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 14088455 - 14088310
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | |||||||    
T  14088455 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 14088356  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| |||||||||| ||||||||    
T  14088355 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagt 14088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 11950255 - 11950400
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||| |||||  |||| || ||| ||||||| ||    || ||||| |||||||| ||||||||| || | ||||| |    
T  11950255 aatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattcta 11950354  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||||||| |||||||||||||||    
T  11950355 agactgaagaagagcatgcagaacatttgaagattgtgttgcaagt 11950400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 13970467 - 13970612
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | |||||||    
T  13970467 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 13970566  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| ||||| |||| ||||||||    
T  13970567 gaactgaggaagagcatgcagaacatctgagggttgtattgcaagt 13970612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 55498570 - 55498491
Alignment:
Q  173 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    ||||||||||||| |||||||| || |||||||||||||| |||||  ||||||| || ||||| |||||||||||||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaa 55498491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 13943803 - 13943661
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||||||| || | |||||||||     
T  13943803 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 13943704  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||| || |||||||    
T  13943703 ctgaagaagagcatgcagaacatctgagaattatgctgcaagt 13943661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 44779026 - 44778884
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||| ||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||| ||| || | |||||||||     
T  44779026 gcgcccggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 44778927  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||||||||||||||    
T  44778926 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagt 44778884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 11889638 - 11889783
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | ||  ||||  | || ||||| ||||| || |||||||||||| | || || |    
T  11889638 aatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactcta 11889737  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||| | ||||||| |||||||| ||||||| |||||| ||||||||    
T  11889738 agtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 6710865 - 6710916
Alignment:
Q  199 gtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
    |||||||| ||||| ||||| ||||||||||| |||||||||||||||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgc 6710916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 15261402 - 15261257
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | |   | ||  |||| ||||| || || || |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||| |||||||| ||||||| |||||| ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagt 15261257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 15723352 - 15723437
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  15723352 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 15723437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 12358877 - 12359019
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||||||| ||    || ||||| || ||||| ||||| ||| || | ||||| |||     
T  12358877 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattagtggttgtatttattgatgacattctgatttattcaaaga 12358976  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  12358977 ctgaagaagagcatgcagaacatctgaagattgtattgcaagt 12359019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 16379278 - 16379420
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| | |  || ||    ||  ||||||| ||||| ||||||||| || | ||||| |||     
T  16379278 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaattcctggtggtatttattgatgatattctgatttattctaaga 16379377  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || | ||||||||||| || ||| |||| ||||||||||||||    
T  16379378 cttaagaagagcatgcagaacatctgagaattgtgttgcaagt 16379420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 15340981 - 15340900
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||    
T  15340981 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgc 15340900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 15400935 - 15401016
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||    
T  15400935 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgc 15401016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 18132693 - 18132778
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatat 194  Q
    |||||||| ||||| |||||||||||||||||  |||| |||||| ||||||| ||    |||||||| |||||||| || |||||    
T  18132693 aatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttacctggataaatttgtggttgtgtttattgacgatat 18132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 28756040 - 28755955
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||| ||  | ||||| |||  |||||| |||||||| || ||| |||| ||||||||||||||    
T  28756040 tttgttgtggtgtttattgatgatatcttaatttattccaagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagt 28755955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 16880114 - 16880086
Alignment:
Q  130 gagtatatgaatagaatatttcatcctta 158  Q
    |||||||||||||||||||||||||||||    
T  16880114 gagtatatgaatagaatatttcatcctta 16880086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 17188156 - 17188112
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 153  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  17188156 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcat 17188112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 6953 - 7197
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| |||||||||||||| ||||||||||||| ||||||||||||||| || ||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaag 7152  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  7153 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtc 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 23507849 - 23507606
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 23507650  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23507649 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 23507606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 21935391 - 21935635
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  ||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21935590  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  21935591 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 21935635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 24583375 - 24583131
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24583176  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    | |||||||||||||||||| |||||||| |||||||||||||||    
T  24583175 tttgaggaagagcatgctgagcatttgagaattgtgttgcaagtc 24583131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 21409219 - 21409074
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||||| || || ||||| ||||||||| | || |||||| |||| |||||  ||||||| || |||||||||||||||||| ||   || || |    
T  21409219 aatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattctgaaatactcta 21409120  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||| || ||||| || |||||||| ||||| ||||||||    
T  21409119 agtctgaggaggaacatgccgagcatttgagaattgttttgcaagt 21409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 21679079 - 21679224
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||  |||||||||    |||||||| || || || ||||| |||||| | |||||||    
T  21679079 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattcga 21679178  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || |||  ||||||||| ||||||||    
T  21679179 gaactgaggaagagcatgcagaacatccgaggattgtattgcaagt 21679224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 17267638 - 17267780
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| | |  || ||    ||||||||||| ||||| ||||||||| || | ||||| |||     
T  17267638 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattcaaaga 17267737  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||  |||| ||||||||||||||    
T  17267738 ctgaagaagagcatgcagaacacctgagaattgtgttgcaagt 17267780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 22463958 - 22463876
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    ||||||||||| |||||||||||||||||| | ||||| ||  |||| || |||||||| || || |||| ||||||||||||    
T  22463958 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgca 22463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 29474434 - 29474519
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  29474434 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 29474519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 20777977 - 20777891
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttg 198  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| |||  || ||    ||||||||||||||||||||||||||||||    
T  20777977 gcgcctggtgtattcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttatagatgatattttg 20777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 21562325 - 21562470
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||| | ||||| || |||||||| ||||||||||| || ||| | ||  |||| || ||||| || |||||||||||||| ||  || | ||||| |    
T  21562325 aatgcgtctggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattcta 21562424  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||||| |  |||||||| |||||    
T  21562425 agactgaagaagagcatgcagagcatttaaaaattgtgtttcaagt 21562470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 175; Significance: 3e-94; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 21871 - 22105
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||||||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 22070  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgt 245  Q
    | |||||||||||||||||| ||||||||||||||    
T  22071 tttgaggaagagcatgctgagcatttgaggattgt 22105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 31447 - 31681
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||||||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 31646  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgt 245  Q
    | |||||||||||||||||| ||||||||||||||    
T  31647 tttgaggaagagcatgctgagcatttgaggattgt 31681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 7434 - 7252
Alignment:
Q  73 cactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttg 172  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||  || ||||||    
T  7434 cactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgttttg 7335  T
Q  173 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||| ||| ||||||||||||||||| |||||||| |||||||| ||||||| ||| ||| |||||||||||||| |||||    
T  7334 tggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtc 7252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 970 - 1214
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||| | |||| |  |||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaag 1169  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  1170 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtc 1214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 25676 - 25432
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 25477  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  25476 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 25432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 173; Significance: 4e-93; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 15190 - 14946
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 14991  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  14990 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 14946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 11198 - 11442
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||  | |||||||||||||||| || ||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 11397  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||    
T  11398 tctgaggaagagcataatgagcatttgaggattgtgttgcaagtc 11442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 26290 - 26534
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||||||  |||| |  ||||||||| ||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 26489  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  26490 tctgaggaagagcatgctgaacatttgaggattgtgttgcaagtc 26534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 173; Significance: 4e-93; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 42540 - 42296
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||| ||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 42341  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  42340 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 42296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 31799 - 31944
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | |||||||    
T  31799 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 31898  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| |||||||||| ||||||||    
T  31899 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagt 31944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 16875559 - 16875803
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16875758  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  16875759 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 16875803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 21848801 - 21849045
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21849000  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  21849001 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 21849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 22436620 - 22436376
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||| ||||||||||||||||||| |||||||||||| |||||||| || |||||||||  ||||||||||||||||||||||||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 22436421  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    ||||||||  |||||||||| ||||||||||| ||||||| ||||    
T  22436420 tctgaggagaagcatgctgagcatttgaggatagtgttgcgagtc 22436376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 20650819 - 20651063
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| || ||| ||||||| |||||||| ||||||||||||||||||||||||||     
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaa 20651018  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| |||||||| || ||||||||||||||||||||||||    
T  20651019 tctgaggaggagcatgccgagcatttgaggattgtgttgcaagtc 20651063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 23155506 - 23155748
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||  ||||||||||||||||| | ||||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||  | ||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaag 23155703  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| || |||| ||| |||||||||||||||||| |||||    
T  23155704 tctgaggaggatcatgttgagcatttgaggattgtgttgtaagtc 23155748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 21195004 - 21195246
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| | |||| |||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||  |||||||| |||||||||||  ||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    || |||||||  ||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||||||||||||||||||     
T  21195104 tgtgccaggta-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaa 21195202  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  21195203 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagt 21195246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 28 - 250
Target Start/End: Complemental strand, 23902464 - 23902242
Alignment:
Q  28 aaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttca 127  Q
    |||| ||||||||||||||||| |||||||| ||||||| |||| ||||||||||||  ||||||||||||||||||||||||||| | |||||||||||    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  128 tggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgc 227  Q
    |||| |||||||||||||||||||||||||  || ||| ||||| |||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgc 23902265  T
Q  228 tgaccatttgaggattgtgttgc 250  Q
    ||| |||||||||||| ||||||    
T  23902264 tgagcatttgaggattatgttgc 23902242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 16414385 - 16414302
Alignment:
Q  34 gaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgcca 117  Q
    |||||||||||||||| ||| |||||||| |||||||| ||||||||||||  |||||||||||||||| ||||||||||||||    
T  16414385 gaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 31569407 - 31569549
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||||||| || | |||||||||     
T  31569407 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 31569506  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| |||||| |||||||    
T  31569507 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagt 31569549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 21323841 - 21323984
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||||| ||    || ||||| |||||||| ||||| ||| || | ||||| |    
T  21323841 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttatcgatgacattctgatctattcaa 21323940  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    || |||| ||||||||||| || ||| ||| |||||||||||||    
T  21323941 agactgaagaagagcatgcagaacatctgaagattgtgttgcaa 21323984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 22988891 - 22988804
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| ||||| || |||||||||||| | ||||| ||| |||| ||||| |||||||| ||||||| |||||| ||||||||    
T  22988891 gtttcgtggttgtgttcatcgatgatattttgatatattccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagt 22988804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20390258 - 20390173
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||| || ||||| | |||||||||||||||    
T  20390258 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcatttaaagattgtgttgcaagt 20390173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 19869954 - 19869866
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcc 155  Q
    ||||| || |||||||||   |||||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||| || |||||    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 22131672 - 22131748
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||||||| |||||| ||||||||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagt 22131748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 32602295 - 32602219
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagt 32602219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 7826140 - 7825896
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 7825941  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  7825940 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 7825896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 27105804 - 27106048
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27106003  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  27106004 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 27106048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 27172521 - 27172277
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27172322  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  27172321 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 27172277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 17925890 - 17925651
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||| |||| ||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||| ||||| |||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaag 17925691  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
    |||  ||| ||||||| ||  ||||| || ||||||||||    
T  17925690 tctagggaggagcatgttgtgcatttaagaattgtgttgc 17925651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 4442168 - 4441924
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||||  |||||||||  ||||| ||||||  |||||||||||| |||||||||||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 4441969  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||| ||| |||||||  || ||||||||||| ||||||| ||||    
T  4441968 tctggggaggagcatgtcgagcatttgaggatggtgttgcgagtc 4441924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 13458275 - 13458036
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||| |||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||| ||||||||||||  ||||||| ||||||||||||||||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||  |  ||  ||||||||||||||||||| |||||||||||||||||||||| |    
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgagg 13458076  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
    || ||||| ||| ||||||| |||||||||||||||||||    
T  13458075 tcagaggaggagtatgctgagcatttgaggattgtgttgc 13458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 13379123 - 13378978
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||  ||||||||||||||||||||||||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctta 158  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatcctta 13378978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 15716948 - 15717173
Alignment:
Q  26 tgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtctt 125  Q
    |||||||||| |||||||||||||  ||||||||||| || ||||| |||||||| |||  ||| |||||||||||  || | |||| |||  |||||||    
T  15716948 tgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtctt 15717047  T
Q  126 catggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcat 225  Q
    |||||| ||||||||||||||||| |||||||  || |||   ||| |||| ||||||||||| ||||| ||||| ||||| | ||| ||||| ||||||    
T  15717048 catggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagcat 15717147  T
Q  226 gctgaccatttgaggattgtgttgca 251  Q
    ||||| ||||| ||||  ||||||||    
T  15717148 gctgaacattttaggaccgtgttgca 15717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 250
Target Start/End: Original strand, 17143354 - 17143545
Alignment:
Q  59 gaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctta 158  Q
    ||||||||||||| |||||||| |||  || |||| ||||||| ||  | ||| |||| |||||||||||||| |||||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  159 cctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgc 250  Q
      | ||    |||||||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||| || ||| |||||||||||||||    
T  17143454 tttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgc 17143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 19614818 - 19614673
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | |||||||    
T  19614818 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 19614719  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| |||||||||| ||||||||    
T  19614718 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagt 19614673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 14139819 - 14139677
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| |||||||||||| | ||||| |||     
T  14139819 gcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattctaaga 14139720  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||||||||||||||    
T  14139719 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagt 14139677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 23503979 - 23504121
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||||||| || | |||||||||     
T  23503979 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 23504078  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||||||||||||||    
T  23504079 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagt 23504121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 48813380 - 48813525
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||| |||| || |||||||| |||||| | || |||||| ||||  ||||  | || ||||| ||||| || |||||||||||| | || || |    
T  48813380 aatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatcgcttcgtggttgtgttcattgatgatattttgatatactcta 48813479  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||| ||||| |||||||| ||||||| |||||||||||||||    
T  48813480 agtctgaagaagaacatgctgagcatttgaagattgtgttgcaagt 48813525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 11386535 - 11386671
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| || |||||||||| ||| ||||| |||||| |||  || ||  | || |||||||||||||| |||||||||||  | ||||| |    
T  11386535 aatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattcta 11386634  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgt 245  Q
    || |||| ||||||||||| || ||| ||||||||||    
T  11386635 agactgaagaagagcatgccgagcatctgaggattgt 11386671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 18052062 - 18052204
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||| ||| || | |||||||||     
T  18052062 gcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 18052161  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||||||||||||||    
T  18052162 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagt 18052204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 13675595 - 13675450
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||||| ||    |||||||| || ||||| ||||| ||| || | ||||| |    
T  13675595 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattcaa 13675496  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  13675495 agactgaagaagagcatgcagagcatctgaagattgtattgcaagt 13675450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 19149354 - 19149209
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || ||||||||||||||| |||| || ||| |||| || ||    |||||||| |||||||| ||||| || ||  | ||||| |    
T  19149354 aatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcta 19149255  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| |||||||||||||||    
T  19149254 agactgatgaagagcatgcagagcatctgaagattgtgttgcaagt 19149209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 20748753 - 20748608
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || |||||||||||||| ||||| || ||| |||| || ||    |||||||| |||||||| ||||| || ||  | ||||| |    
T  20748753 aatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcta 20748654  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| |||||||||||||||    
T  20748653 agactgatgaagagcatgcagagcatctgaagattgtgttgcaagt 20748608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 11770430 - 11770514
Alignment:
Q  170 ttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||| ||||| || |||||||||||| | || || |||||||||| ||| |||||||| ||||||| |||||| ||||||||    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagt 11770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 13023440 - 13023355
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||||||||||||| ||||||| |||| | ||||| ||| |||| || |||||||| || ||| |||| ||||| ||||||||    
T  13023440 tttgtggtggtgtttattgatgataatttgatttattctaagactgaagaggagcatgcagaacatctgagaattgtattgcaagt 13023355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 39232 - 39320
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcc 155  Q
    ||||| || |||||||||   |||||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||| || |||||    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 15100709 - 15100854
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || ||||||||||||||  |||| || ||| ||||||| ||    || ||||| |||||||| ||||| || ||| | ||||| |    
T  15100709 aatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattcta 15100808  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| ||| || ||||||||    
T  15100809 agactgaagaagagcatgcagaacatctgaagatcgtcttgcaagt 15100854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 26092964 - 26093049
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  26092964 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 26093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 49154384 - 49154299
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  49154384 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 49154299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 24458 - 24215
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||| ||||||||     
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaa 24259  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  24258 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagt 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 24829749 - 24829990
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24829948  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  24829949 tctgaggaagagcatgcggagcatttgaggattgtgttgcaa 24829990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 25130491 - 25130247
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||| | |||||||||||||||||| ||||||||||||| ||| |||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaag 25130292  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||||||| ||||||||| ||||||||| ||||    
T  25130291 tctgaggaggagcatgctgagcatttgagggttgtgttgcgagtc 25130247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 24568229 - 24568473
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||||||||||||||||||||||| | |||||| ||| |||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaag 24568428  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||    
T  24568429 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtc 24568473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 22760130 - 22760373
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||||||||||||||||||||||| || ||||  ||| |||||||| ||||||||||||  |||||||||||||||||||||| |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||     
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaa 22760329  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||||||| | ||| |||||||||||||||||||    
T  22760330 tctgaggaggagcatgctaagcatctgaggattgtgttgcaagt 22760373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 254
Target Start/End: Complemental strand, 22279992 - 22279744
Alignment:
Q  6 tggacatcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagta 105  Q
    |||| |||||||||| ||| | ||| | ||| ||||||||||||  |||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  22279992 tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagta 22279893  T
Q  106 tccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtatt 205  Q
    || ||||||||| ||||||| ||||| || ||||||||||||||| ||||||| || ||| |||||||||||||||| ||||||||||||||||||||||    
T  22279892 tctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtatt 22279793  T
Q  206 cgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||  |||| ||||||||||| |||||||||||||||||||||||    
T  22279792 cgaaatcgaaggaggagcatgctgagcatttgaggattgtgttgcaagt 22279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 10037940 - 10038133
Alignment:
Q  58 cgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctt 157  Q
    |||||||||||||| |||||||| ||   ||||||| ||||||| ||  | |||||||  |||||||||||||| || ||||||||||| || |||||||    
T  10037940 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 10038039  T
Q  158 acctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |  | ||    ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||| || ||| | ||||||||||||||    
T  10038040 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgca 10038133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 10098325 - 10098518
Alignment:
Q  58 cgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctt 157  Q
    |||||||||||||| |||||||| ||   ||||||| ||||||| ||  | |||||||  |||||||||||||| || ||||||||||| || |||||||    
T  10098325 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 10098424  T
Q  158 acctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |  | ||    ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||| || ||| | ||||||||||||||    
T  10098425 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattgtgttgca 10098518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 23098677 - 23098813
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || ||||||||||||||||| || |||||| |||  || ||  | || |||||||||||||| |||||||||||  | ||||| |    
T  23098677 aatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattcta 23098776  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgt 245  Q
    || |||| ||||||||||| || ||| ||||||||||    
T  23098777 agactgaagaagagcatgccgagcatctgaggattgt 23098813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 27789521 - 27789379
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||||||| || | |||||||||     
T  27789521 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 27789422  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| |||||| |||||||    
T  27789421 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagt 27789379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 12576134 - 12575992
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||   | ||    || |||||||| ||||| ||||| ||| || | |||||||||     
T  12576134 gcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 12576035  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| ||||||||||||||    
T  12576034 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagt 12575992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 23112520 - 23112375
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||  |||| || |||||||| ||||||||||| || ||| |||| || ||    ||||| || |||||||| |||||||| ||| | ||||| |    
T  23112520 aatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattcta 23112421  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||||| | |||||||||||||||    
T  23112420 agactgaagaagagcatgcagagcatttaaagattgtgttgcaagt 23112375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 30010843 - 30010988
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||||| || || ||| | ||||||||| | || |||||| |||| || ||  ||||||| || ||||||||||||||||||||| | || || |    
T  30010843 aatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgatattttgatatactcca 30010942  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| || ||||  || |||||||| ||||| ||||||||    
T  30010943 agtccgaggaggaacatgtcgagcatttgagaattgttttgcaagt 30010988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 23278560 - 23278417
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| |||| || ||   ||| ||||| || ||||| ||||| ||| || | ||||| |    
T  23278560 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattcta 23278461  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    || |||| ||||||||||| || ||| ||| |||||||||||||    
T  23278460 agactgaagaagagcatgcagaacatctgaagattgtgttgcaa 23278417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 24818953 - 24819034
Alignment:
Q  173 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||| |||||||||||||| ||||||||    
T  24818953 tggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagt 24819034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 252
Target Start/End: Complemental strand, 24950371 - 24950231
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||||||| ||    |||| ||| || ||| | ||||||||| || | ||||| |||     
T  24950371 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgcggttgtatttgttgatgatattctgatttattcaaaga 24950272  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    |||| ||||||||||| || ||| ||| |||||||||||||    
T  24950271 ctgaagaagagcatgcagaacatctgaagattgtgttgcaa 24950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 27208894 - 27208973
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    ||||||||||||||||||||||||||| | ||||| ||| |||| || | |||||| || ||  ||| ||||||||||||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgca 27208973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 1065475 - 1065390
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||||||| ||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| || |||||||||||    
T  1065475 tttgtggtggtatttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagt 1065390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 23189633 - 23189557
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||||||| ||||||||| | || || ||| |||||||||| |||||||| ||| ||| |||||| || |||||    
T  23189633 gtgtttatagacgatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagt 23189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 255
Target Start/End: Complemental strand, 16340 - 16096
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| ||||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||| |||||||||||||||| || ||||||||||||||||| ||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaag 16141  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||    
T  16140 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtc 16096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 827 - 1069
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||||||||  ||||||||||||  ||||||||||||||||||||||||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||  | |||  |||||||||||||||||||||||||| ||||||||||||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaag 1025  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  1026 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagt 1069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 1645 - 1888
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||| |||||| ||||||||| |||||||||||| ||||||||  |||||||||||   || |||||||||||||| |||||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 1844  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1845 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 255
Target Start/End: Complemental strand, 374 - 145
Alignment:
Q  26 tgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtctt 125  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  374 tgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctt 275  T
Q  126 catggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcat 225  Q
    ||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  274 catagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaagagcat 175  T
Q  226 gctgaccatttgaggattgtgttgcaagtc 255  Q
    ||||| |||||||||||| |||||||||||    
T  174 gctgagcatttgaggattatgttgcaagtc 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 15291179 - 15291423
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||||||| || |||  ||||||||||||||| ||||||||||||||||||||||| |||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaag 15291378  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  15291379 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 15291423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 37 - 250
Target Start/End: Original strand, 12340912 - 12341125
Alignment:
Q  37 gatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtata 136  Q
    ||||||||||||| ||||||||||||  || |||| ||||||||||||  ||||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  137 tgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccattt 236  Q
    ||||||| ||||| |||||||  || ||||||||||||||  | ||||| |||||||| || |||||| ||||||| ||||| ||||||||||| ||| |    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatct 12341111  T
Q  237 gaggattgtgttgc 250  Q
    ||||||||||||||    
T  12341112 gaggattgtgttgc 12341125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 51604914 - 51605056
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| |||  || ||    || |||||||| ||||| ||||||||| || | |||||||||     
T  51604914 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 51605013  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| |||| |||||| |||||||    
T  51605014 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagt 51605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 8322955 - 8323031
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgt 245  Q
    |||||||||||||| ||||| ||||||||||||||||||||||  ||||| |||||||| || ||| |||| |||||    
T  8322955 tttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgt 8323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 14696203 - 14696121
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||| || |||||||||||| | || |||||||| || ||||| |||||||| ||||||| |||||| ||||||||    
T  14696203 gtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagt 14696121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 14301898 - 14301983
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  14301898 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 14301983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 15001544 - 15001629
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||| |||  ||| ||||||||||| || ||| |||||||||||||||||||    
T  15001544 tttgtggttgtgtttattgatgacatcttgatttattctaagattgaagaagagcatgcagaacatctgaggattgtgttgcaagt 15001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 8708055 - 8707919
Alignment:
Q  118 ggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 217  Q
    ||||| || |||||||| ||||||||||| || ||| ||||  | ||  | |||||||| |||||||| ||||| || ||| | ||||| |||||||| |    
T  8708055 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaag 8707956  T
Q  218 aagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||| || |||| ||   |||||||||||||    
T  8707955 aagagcatgcagagcattagaaagttgtgttgcaagt 8707919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 3262973 - 3263058
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  3262973 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 3263058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 15323370 - 15323225
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || ||||| || ||||||||||| || ||| |||| || ||    |||||||| |||||||| ||||||||| |  | ||||| |    
T  15323370 aatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattcta 15323271  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||  ||| ||||||||||| || ||| |||  ||||||||||||||    
T  15323270 agagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagt 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 40475133 - 40475048
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  40475133 tttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 40475048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 44660045 - 44660130
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| || ||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||||||||||||    
T  44660045 tttgttgtggtgtttattgacgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagt 44660130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 7885 - 8128
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaag 8084  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || ||||||||||||| ||| ||| |||||||||||||||||||    
T  8085 tcggaggaagagcatgttgagcatctgaggattgtgttgcaagt 8128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 5830 - 6076
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  111 tgcgccaggtgtcttcatggag-tatatgaata-gaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||||||||| || ||  || ||||||| |||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcga 6029  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6030 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtc 6076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 1976 - 2216
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||  ||||||||||||||||||||| ||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||| || ||||||||||||||||||||||| || |||  ||||||||||||||| ||||||||||||||||||||||| |||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaag 2175  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  2176 tctgaggaagagcatgctgagcatttgaggattatgttgca 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 26605 - 26410
Alignment:
Q  15 tcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcg 114  Q
    |||||| ||| |||||||||||||||||||||| | ||| |||||||| |||||||| ||||||||||||  ||||||| ||||| ||||||| ||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  115 ccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||||||||||||||||| |||||||||||||||||||||||||  || ||| ||||||||||| |||||||  |||| ||||||||||||||||||    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaag 26410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 156; Significance: 6e-83; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 132513 - 132756
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | ||||| |||||||||||| ||| ||||||||||||||| ||||| |||||||||||   ||||||||||||||||||||| ||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||| |||||||| ||||| || ||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaag 132712  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    | |||||||||||||||||| |||||||||||||||||||||||    
T  132713 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagt 132756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||| ||||||| ||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||||||  ||||||||||||| |||||| |||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  111 tgcgccaggtgt 122  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 25942 - 25866
Alignment:
Q  177 ggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaag 253  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaag 25866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 7029 - 7254
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    ||||||| |||||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||     
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 7228  T
Q  211 tctgaggaagagcatgctgaccattt 236  Q
    |||||||| ||||||||||| |||||    
T  7229 tctgaggaggagcatgctgagcattt 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 8850 - 9093
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||| ||  | |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| ||||||||||| ||||  || ||||||||||||||||||||||| || ||  |||||||| ||||||| ||||||||||||||||||||||| |||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaag 9049  T
Q  211 tctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  9050 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 9093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 1908 - 2122
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||   |||||||||||||||||||| ||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaag 210  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||     
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaa 2107  T
Q  211 tctgaggaagagcat 225  Q
    |||||||| ||||||    
T  2108 tctgaggacgagcat 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| | |||||||||||||||| |||||   ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  111 tgcgccaggtgtcttcatggagtatatgaatagaatatt 149  Q
    ||| ||||||||||| ||||| || ||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaa 110  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  111 tgcgc 115  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 9130 - 8937
Alignment:
Q  58 cgaacgaggtatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctt 157  Q
    |||||||||||||| |||||||| ||   ||||||| ||||||| ||  | |||||||  |||||||||||||| || ||||||||||| || |||||||    
T  9130 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 9031  T
Q  158 acctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |  | ||    ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||| || ||| | ||||||||||||||    
T  9030 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgca 8937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 48636 - 48781
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | |||||||    
T  48636 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 48735  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| |||||||||| ||||||||    
T  48736 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagt 48781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 123 - 268
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||| |||| || ||    |||||||| ||||  || ||||| |||||| | |||||||    
T  123 aatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattcga 222  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       | |||||||||||||| || ||| |||| ||||||||||||||    
T  223 caacggaggaagagcatgcagaacatctgagaattgtgttgcaagt 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 9156 - 9301
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | ||  ||||  |||| ||||| ||||| || |||||||||||| | || || |    
T  9156 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgtttcgtggttgtgttcatggatgatattttgatatactcta 9255  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||| ||||| |||| ||| |||||||||||||| ||||||||    
T  9256 agtctgaagaagaacatgttgagcatttgaggattgttttgcaagt 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 4847 - 4796
Alignment:
Q  33 ggaagatatatccaaaaacgcgttccgaacgaggtatggccactatgagtat 84  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtat 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 114743 - 114598
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||| |||||||||||||| |||||| ||||||| ||    |||||||| || || || ||||| |||||| | ||||| |    
T  114743 aatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcaa 114644  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
       |||||||||||||||| || ||| ||| |||||| ||||||||    
T  114643 gaactgaggaagagcatgcagaacatctgatgattgtattgcaagt 114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 1811 - 1914
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||| ||||| || ||||||||| | ||||||||||| || ||||| ||||||||    |||||||| || ||||||||||||||||||||||| || |    
T  1811 aatgcaccaggagtgttcatggagcacatgaatagaattttccatccctacctagataaatttgtggttgtctttatagatgatattttggtgtactcta 1910  T
Q  209 agtc 212  Q
    ||||    
T  1911 agtc 1914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  11 atcatcagattagaatgaaggcggaagatatatccaaaaacgcgttccgaacgaggtat 69  Q
    |||||||||||| | |||||||  ||||||||||||||| |||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 27389 - 27515
Alignment:
Q  128 tggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgc 227  Q
    |||| ||||||||| | || |||||| |||| |||||  ||||||| || |||||||||||||||||  || | || || ||||||||||| || |||||    
T  27389 tggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgc 27488  T
Q  228 tgaccatttgaggattgtgttgcaagt 254  Q
     || |||||||| ||||| ||||||||    
T  27489 cgagcatttgagaattgttttgcaagt 27515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 76614 - 76490
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat-------ccttacctagactgttttgtggtggtgtttatagatgatattttggtg 201  Q
    |||| ||| ||||| |||||||||||||||||||| ||||| |||       ||||| || |||   ||| |||| ||||||||||| ||||| ||||||    
T  76614 aatgtgccgggtgttttcatggagtatatgaataggatattccatattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtg 76515  T
Q  202 tattcgaagtctgaggaagagcatg 226  Q
    ||||| ||||| ||||| |||||||    
T  76514 tattcaaagtcagaggaggagcatg 76490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 21033 - 20888
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| | ||||| ||    ||||||||||| || || ||||| |||||| | ||||| |    
T  21033 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattcta 20934  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
        ||||||||||||||| || ||| |||||| ||| ||||||||    
T  20933 gaaatgaggaagagcatgcagaacatctgaggactgtattgcaagt 20888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 25195 - 25050
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| | ||||| ||    ||||||||||| || || ||||| |||||| | ||||| |    
T  25195 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattcta 25096  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
        ||||||||||||||| || ||| |||||| ||| ||||||||    
T  25095 gaaatgaggaagagcatgcagaacatctgaggactgtattgcaagt 25050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 24655 - 24800
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | |   | ||  |||| ||||| ||||| || |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||| |||||||| ||||||| |||||| ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagt 24800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 201594 - 201735
Alignment:
Q  113 cgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtc 212  Q
    |||| ||||| || |||||||| ||||||||||| || ||| ||||  | ||  | |||||||| |||||||| |||||||||||| | || || ||| |    
T  201594 cgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgatattttgatatactctaagac 201693  T
Q  213 tgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||| ||||| ||||| || ||||||| | |||||||||||||    
T  201694 tgaagaagaacatgcagaacatttgaaggttgtgttgcaagt 201735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 709 - 764
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctaga 164  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  709 aatgcacctggtgtgttcatggagtatatgaatagaatttttcatgcttacctaga 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 14594 - 14507
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| ||||| || || ||||||||| | || |||||||| || |||||||||||||| ||||||| |||||| ||||||||    
T  14594 gtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaagaagagcatgctgagcatttgaagattgttttgcaagt 14507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 25234 - 25155
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgca 251  Q
    |||||||| |||||||||||||||||| | ||||| ||| |||| || |||||||| || || |||| ||||||||||||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgca 25155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 254
Target Start/End: Complemental strand, 49330 - 49143
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagact 166  Q
    ||||| |||||||| ||| | |||||||| || || ||  | |||||||| ||||| || |||||||||||||| | ||| || ||| |||| || ||      
T  49330 tatggtcactatgaatataaggtgatgcctttcggcgttactaatgcgcctggtgtgtttatggagtatatgaacaaaattttccatgcttatctggata 49231  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
      |||||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  49230 aatttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagt 49143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 17063 - 16916
Alignment:
Q  107 ccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattc 206  Q
    |||||||||||||||| || |||||||| |||||| | || |||||| | ||  ||||  | || ||||| ||||| || || ||||||||| | || ||    
T  17063 ccaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactc 16964  T
Q  207 gaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
     ||| |||| ||||| |||||||| ||||||| |||||| ||||||||    
T  16963 caagactgaagaagaacatgctgagcatttgaagattgttttgcaagt 16916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 84659 - 84786
Alignment:
Q  127 atggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 226  Q
    ||||| ||||||||| | || |||||| |||| |||||  ||||||| || |||||||||||||||||| || | || || ||| |  |||| |||||||    
T  84659 atggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagcatg 84758  T
Q  227 ctgaccatttgaggattgtgttgcaagt 254  Q
    | || |||||||| ||||| ||||||||    
T  84759 ccgagcatttgagaattgttttgcaagt 84786  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 495144 - 495057
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||| ||||| || || ||||||||| | || ||||||||||| ||||| ||||||||  |||||| |||||| ||||||||    
T  495144 gttttgtggttgtgttcatcgacgatattttgatatactcgaagtctgaagaagaacatgctgagtatttgaagattgttttgcaagt 495057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 10911 - 11053
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| |||||||||||||||||  |||| |||||| ||| ||| ||    || || ||||| ||||| |||||||||||  | ||||| |||     
T  10911 gcgcctggtgtgttcatggagtatatgaaccgaatttttcatgctttcctggataaattcgtagtggtatttattgatgatattttaatttattctaaga 11010  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| || |||||||| || ||| |||||||||| ||||||||    
T  11011 ctgaagaggagcatgcagaacatctgaggattgtattgcaagt 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 11424 - 11506
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  11424 gtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagt 11506  T

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Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 5211 - 5356
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || |||||||| ||||||||||| || ||| |||| || ||    |||||||| |||||||| ||||||||  |  | ||||| |    
T  5211 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattcta 5310  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||  ||| ||||||||||| || ||| ||| |||||||||||||||    
T  5311 agaatgaagaagagcatgcagagcatctgaagattgtgttgcaagt 5356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 9062 - 8977
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| ||||||||    
T  9062 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagt 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 10179 - 10324
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    ||||||||  |||| || ||||||||||||||  |||| || ||| ||||||||||    || ||||| |||||||| ||||| || ||| | ||||| |    
T  10179 aatgcgcctagtgtgtttatggagtatatgaaccgaattttccatgcttacctagataaattcgtggttgtgtttattgatgacatcttgatttattcaa 10278  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  10279 agactgaagaagagcatgcagaacatctgaagattgtattgcaagt 10324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 5532 - 5617
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||| || ||| ||| |||||||||||||||    
T  5532 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagt 5617  T

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Target: scaffold0149; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 9963 - 10048
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||| || ||| ||| |||||||||||||||    
T  9963 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagt 10048  T

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Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 24338 - 24253
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||||||| || | ||||| ||| |||| || |||||||| || ||| ||| |||||||||||||||    
T  24338 tttgtggttgtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagaacatctgaagattgtgttgcaagt 24253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 2900 - 2755
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || ||||||||||||||  |||| || ||| ||||||| ||    || ||||| |||||||| ||||| || ||| | ||||| |    
T  2900 aatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattcaa 2801  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  2800 agactgaagaagagcatgcagaacatctgaagattgtattgcaagt 2755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 10927 - 11008
Alignment:
Q  173 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||| |||||||||||||| ||||||||    
T  10927 tggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagt 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 17119 - 17200
Alignment:
Q  173 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||| |||||||||||||| ||||||||    
T  17119 tggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagt 17200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 176466 - 176611
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || |||||||| ||||||||||| || ||| ||||  | ||  | ||||| || || ||||| ||||| || ||| | ||||| |    
T  176466 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattcta 176565  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||||| ||||||||||| || ||||| | |||||||||| ||||    
T  176566 agtctgaagaagagcatgcagagcatttaaagattgtgttgtaagt 176611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 726 - 566
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagact 166  Q
    ||||| || ||||| ||| | ||||||||||| || ||  | |||||||| ||||| || |||||||||||||| ||||| || ||| |||| |||||      
T  726 tatggtcattatgaatataaggtgatgccattcggtgttactaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctagata 627  T
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgc 227  Q
      |||||||| |||||||| ||||| || ||  | ||||| ||| |||| |||||||||||    
T  626 aatttgtggttgtgtttattgatgacatcttaatttattctaagactgaagaagagcatgc 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 53214 - 53086
Alignment:
Q  124 ttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 223  Q
    |||||||||||||||||  | || || ||| ||||||| ||    |||||||| || ||||| ||||||||| || | ||||| ||| |||| |||||||    
T  53214 ttcatggagtatatgaaccggattttccatgcttacctggataaatttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagc 53115  T
Q  224 atgctgaccatttgaggattgtgttgcaa 252  Q
    |||| || ||| ||| |||||||||||||    
T  53114 atgcagaacatctgaagattgtgttgcaa 53086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 115172 - 115248
Alignment:
Q  178 gtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| || |||||||||||| | || || |||||||| ||||| |||||||| ||||||| |||||| ||||||||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagt 115248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 3025 - 2938
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| ||||| || |||||||||||| | || || |||||||| ||||| |||||||| ||||||| |||| | ||||||||    
T  3025 gtttcgtggttgtgttcatcgatgatattttgatataatctaagtctgaagaagaacatgctgaacatttgaagattattttgcaagt 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 43041 - 42958
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaa 252  Q
    |||||||| |||||||| ||||||||| || | ||||| ||| |||| ||||||||||| || ||| |||  ||||||||||||    
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaa 42958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 195667 - 195754
Alignment:
Q  167 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||||| || ||||| |||||||||||| | || || |||||||| ||||| |||||||| ||| ||| | |||| ||||||||    
T  195667 gttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagt 195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 6014 - 6156
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||||||||| || |||||||| |||||| | || || ||| | || |||||  |||| ||||| ||||| || || ||||||||| | || || |||     
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||| |||||||| || |||| |||||| ||||||||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagt 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 16762 - 16696
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttga 238  Q
    |||||||| ||||| |||||||||||| | || || |||||||| ||||| |||||||| |||||||    
T  16762 gtggtggtttttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttga 16696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 5992 - 5910
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||| || |||||||||||| | || |||||||| || ||||| |||||||| ||||||| |||||| || |||||    
T  5992 gtggttgtgttcatcgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttacaagt 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 13122 - 13040
Alignment:
Q  172 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||| || |||||||||||| | || |||||||| || ||||| |||||||| ||||||| |||||| || |||||    
T  13122 gtggttgtgttcatcgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttacaagt 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 31501 - 31587
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagtc 255  Q
    ||||||||||||||||| ||||||||| || | ||||| ||| |||| || |||||||| || ||| ||| |||| | |||||||||    
T  31501 tttgtggtggtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagagcatctgaagattatattgcaagtc 31587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 64633 - 64775
Alignment:
Q  112 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcgaagt 211  Q
    ||||| ||||| || ||||||||||||||  |||| || ||| |||| || ||    |||||||| |||||||| ||||| || ||  | ||||| |||     
T  64633 gcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaaga 64732  T
Q  212 ctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||| ||||||||||| || ||| ||| |||||||||||||||    
T  64733 ctgaagaagagcatgcagagcatctgaagattgtgttgcaagt 64775  T

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Target: scaffold1830 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 1178 - 1033
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||| ||| ||||| || |||||||||||||| ||||| || ||| |||| || ||    |||||||| |||||||| ||||| || ||| | ||||| |    
T  1178 aatgtgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaa 1079  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    || |||| ||||||||||| || ||| |||  ||||| ||||||||    
T  1078 agactgaagaagagcatgcagaacatctgaatattgtattgcaagt 1033  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  67 tatggccactatgagtatcatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaa 140  Q
    ||||| || |||||||||   |||||||| |||||||| ||||| |||||||| || || ||||||||||||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

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Target: scaffold0404 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 6874 - 6789
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||| |||||||||||||||  || ||| ||| |||||| ||||||||    
T  6874 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaggaagagcatgtagaacatctgaagattgtattgcaagt 6789  T

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Target: scaffold0261 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 13518 - 13603
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||||||| | || ||||||||||| || ||| ||| |||||| ||||||||    
T  13518 tttgtggttgtgtttattgatgacatcttgatttattcgaagacagaagaagagcatgcagaacatctgaagattgtattgcaagt 13603  T

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Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 21697 - 21782
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    |||||||| |||||||| ||||| || ||| | ||||||||| | || ||||||||||| || ||| ||| |||||| ||||||||    
T  21697 tttgtggttgtgtttattgatgacatcttgatttattcgaagacagaagaagagcatgcagaacatctgaagattgtattgcaagt 21782  T

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Target: scaffold0089 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 14895 - 14980
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  14895 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 14980  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 50994 - 50849
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| || |||||||||||||||||||| |||||| | || || ||    ||| |||| |||||||| ||||| || ||  | ||||| |    
T  50994 aatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggataaatttttggttgtgtttattgatgacatcttaatttattcta 50895  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
     | |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  50894 tgactgaagaagagcatgcagagcatctgaagattgtattgcaagt 50849  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 40515 - 40600
Alignment:
Q  169 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaccatttgaggattgtgttgcaagt 254  Q
    ||||| ||||||||||| |||||||||||  | ||||| |||  |||||| |||||||| || ||| |||| ||||| ||||||||    
T  40515 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagt 40600  T

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Target: scaffold0476 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 1667 - 1711
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 153  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  1667 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcat 1711  T

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Target: scaffold0348 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 9996 - 10040
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 153  Q
    |||||||||||||| |||||||||||||||||  |||| ||||||    
T  9996 aatgcgccaggtgtgttcatggagtatatgaaccgaatttttcat 10040  T

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Target: scaffold0139 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 37832 - 37696
Alignment:
Q  109 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttacctagactgttttgtggtggtgtttatagatgatattttggtgtattcga 208  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||||| ||    |||||||| |  ||||| ||||| ||| || | ||||| |    
T  37832 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgaatttattgatgacattctgatttattcaa 37733  T
Q  209 agtctgaggaagagcatgctgaccatttgaggattgt 245  Q
    || |||| ||||||||||| || ||| ||| ||||||    
T  37732 agactgaagaagagcatgcagaacatctgaagattgt 37696  T

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