View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16950_high_27 (Length: 260)
Name: NF16950_high_27
Description: NF16950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16950_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 14945179 - 14945412
Alignment:
| Q |
18 |
agggagacggtcgaggagatggtgaaattaacaggggtttcaaacaaggcagattacttgccatttttaaggtggtttgattttcagaatttagagaaga |
117 |
Q |
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| T |
14945179 |
agggagacggttgaggagatggtgaaattaacaggggtttcaaacaaggcagattacttgccctttttaaggtggtttgattttcagaatttagagaaga |
14945278 |
T |
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| Q |
118 |
ggttacaaaatataagcaatagatttgatgctatcttgaatgcactcatttatgagaaccgtagtaagatgaagccacataataccttgatagatcatct |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
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| T |
14945279 |
ggttacaaaatataagcaatagatttgatgctatcttgaatgcactcatttatgagaaccgtagtaagatgaagccagagaataccttgatagatcatct |
14945378 |
T |
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| Q |
218 |
cttaaaacttcaagaatcacagcctgagtattat |
251 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
14945379 |
cttaaaacttcaagaatcacagcctgagtattat |
14945412 |
T |
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