View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16954_low_13 (Length: 227)
Name: NF16954_low_13
Description: NF16954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16954_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 49082336 - 49082483
Alignment:
| Q |
71 |
tattattctccaccatgcctttaatgctttaattttttaaatgcagttgcagcagttcgtgatgggttaaaggcatgggaaacattaaagaataaatcac |
170 |
Q |
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| T |
49082336 |
tattattctccaccatgcctttaatgctttaattttttaaatgcagttgcagctgttcgtgatgggttaaaggcatgggaaacattaaagaataaatcac |
49082435 |
T |
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| Q |
171 |
ttgacatagatctcgtattaacagaagtcgatctaccatcaatctctg |
218 |
Q |
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| T |
49082436 |
ttgacatagatctcgtattaacagaagtcgatctcccatcaatctctg |
49082483 |
T |
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