View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16954_low_2 (Length: 668)
Name: NF16954_low_2
Description: NF16954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16954_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 425; Significance: 0; HSPs: 27)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 169 - 650
Target Start/End: Original strand, 23402071 - 23402552
Alignment:
| Q |
169 |
tgtagaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatc |
268 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
23402071 |
tgtagaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatc |
23402170 |
T |
|
| Q |
269 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagac |
368 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23402171 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcaggc |
23402270 |
T |
|
| Q |
369 |
ttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttgcctttgttgggatcttgt |
468 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23402271 |
ttgttcttcctggtgaattggccaagcatgctgtctcagagggaaccaaagctgtgaccaagtttactagttcttagattttcctttgttgggatcttgt |
23402370 |
T |
|
| Q |
469 |
ttgatgttacttcatcggatattagggattgttagaagttttaattagtagttttagnnnnnnngctttgaagctgtaatgaagtagtgagatctggttg |
568 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23402371 |
ttgatgttacttcatcggatattagggattgttagaagttttaattagtagttttagtttttttgctttgaagctgtaatgaagtagtgagatctggttg |
23402470 |
T |
|
| Q |
569 |
atcctctttgtgtatgataatggtggaattaatgacatttagtttaaaaattgtttgtattgttcaatttaattttctgcac |
650 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23402471 |
atcctctttgtgtatgataatggtggaattaatgacatttagtttaaaaattgtttgtattgttcaatttaattttctgcac |
23402552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 173 - 450
Target Start/End: Original strand, 23885828 - 23886105
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
23885828 |
gaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatcaatg |
23885927 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23885928 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcaggcttgt |
23886027 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23886028 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
23886105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 173 - 450
Target Start/End: Original strand, 24307224 - 24307501
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24307224 |
gaaacatacaagatctatatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
24307323 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24307324 |
atatcttcgagaaactagctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgctgtcagacttgt |
24307423 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24307424 |
tcttcctggtgaattggccaagcatgctgtttctgagggtaccaaagctgtgaccaagttcactagttcttagatttg |
24307501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 169 - 447
Target Start/End: Complemental strand, 23453653 - 23453375
Alignment:
| Q |
169 |
tgtagaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatc |
268 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
23453653 |
tgtagaaacatacaagatctacatcttcaaagttctgaatcatgttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatc |
23453554 |
T |
|
| Q |
269 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagac |
368 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23453553 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagtc |
23453454 |
T |
|
| Q |
369 |
ttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagat |
447 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23453453 |
ttgttcttcctggtgaattggccaagcatgctgtttctgaaggcaccaaggctgtgaccaagtttactagttcttagat |
23453375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 173 - 447
Target Start/End: Original strand, 23868733 - 23869007
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23868733 |
gaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
23868832 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23868833 |
atatcttcgagaaacttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgctgtcagacttgt |
23868932 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagat |
447 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
23868933 |
tcttcctggtgaattggccaaacatgctgtttctgaaggaacaaaagctgtgactaagttcactagttcttagat |
23869007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 173 - 446
Target Start/End: Complemental strand, 23415986 - 23415713
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
23415986 |
gaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatcaatg |
23415887 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415886 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
23415787 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttaga |
446 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
23415786 |
tcttcctggtgaattggccaagcatgctgtttctgagggtaccaaggctgtgactaagtttactagctcttaga |
23415713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 169 - 446
Target Start/End: Complemental strand, 23408821 - 23408544
Alignment:
| Q |
169 |
tgtagaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatc |
268 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
23408821 |
tgtagaaacatacaagatctacatcttcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagcgatgggtatcatgaacagtttcatc |
23408722 |
T |
|
| Q |
269 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagac |
368 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
23408721 |
aatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagaccgcggtcagac |
23408622 |
T |
|
| Q |
369 |
ttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttaga |
446 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
23408621 |
ttgttcttcctggagaattggccaagcatgctgtttctgaaggcaccaaggctgtgactaagtttactagctcttaga |
23408544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 173 - 450
Target Start/End: Original strand, 26832736 - 26833013
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
26832736 |
gaaacatacaagatctacatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg |
26832835 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
26832836 |
atatcttcgagaaactcgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagaccgcggtcaggcttgt |
26832935 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
||| || ||||||||||||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
26832936 |
tctgcccggtgaattggccaagcatgctgtttctgagggtaccaaggctgtcactaagtttactagttcttagatttg |
26833013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 173 - 450
Target Start/End: Original strand, 26434025 - 26434302
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
26434025 |
gaaacatacaagatctacatcttcaaggttctgaaacaagttcatccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg |
26434124 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
26434125 |
atatcttcgagaaactcgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagaccgcggtcaggcttgt |
26434224 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
||| || ||||||||||||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
26434225 |
tctgcccggtgaattggccaagcatgctgtttctgagggtaccaaggctgtcactaagtttactagttcttagatttg |
26434302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 173 - 450
Target Start/End: Original strand, 26435805 - 26436082
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
26435805 |
gaaacatacaagatctacatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg |
26435904 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
26435905 |
atatcttcgagaaactcactcaagaatcttccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagaccgcggtcaggcttgt |
26436004 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
||| || ||||||||||||||||||| ||| |||||||| ||||| ||||| || |||||||| |||||||||||||| |
|
|
| T |
26436005 |
tctgcccggtgaattggccaagcatgatgtttctgagggtaccaaggctgtcactaagtttaccagttcttagatttg |
26436082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 173 - 447
Target Start/End: Complemental strand, 34662318 - 34662044
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
34662318 |
gaaacctacaagatctacatcttcaaggttctgaaacaagttcaccctgacattggtatctcaagcaaagccatgggtattatgaacagtttcatcaatg |
34662219 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| | || ||||||||||| || || ||||| ||||||||||||||||| || || ||||| |
|
|
| T |
34662218 |
atatcttcgagaagctcgctcaagaatcttccagacttgcaaggtataacaagaagccgacgataacttcgagggaaattcagactgctgttaggcttgt |
34662119 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagat |
447 |
Q |
| |
|
||||||||| |||||||| ||||||||||| |||||||| ||||||||||| || |||||||| ||||||||||| |
|
|
| T |
34662118 |
tcttcctggagaattggctaagcatgctgtgtctgagggtaccaaagctgtaacgaagtttacaagttcttagat |
34662044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 23416142 - 23416021
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23416142 |
gagaagaagccagcggagaagaaaccagctgaggagaagaagtccaccgttgccgagaaagctccagcagagaagaagccaaaggcagggaagaagctac |
23416043 |
T |
|
| Q |
114 |
caaaggaaggtggttccgctgc |
135 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
23416042 |
caaaggaaggtggttcagctgc |
23416021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 262 - 394
Target Start/End: Complemental strand, 23451920 - 23451788
Alignment:
| Q |
262 |
tttcatcaatgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgca |
361 |
Q |
| |
|
||||||||| |||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
23451920 |
tttcatcaacgatatctttgagaagctcgctcaagaatactccagacttgctcgctacaacaagaagccaacaatcacttcaagggaaattcagaccgca |
23451821 |
T |
|
| Q |
362 |
gtcagacttgttcttcctggtgaattggccaag |
394 |
Q |
| |
|
||||| |||||||| || ||||||||||||||| |
|
|
| T |
23451820 |
gtcaggcttgttctgcccggtgaattggccaag |
23451788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 24307065 - 24307186
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
24307065 |
gagaagaagccagcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaggctcctgctgagaagaagccaaaggcaggaaagaagctac |
24307164 |
T |
|
| Q |
114 |
caaaggaaggtggttccgctgc |
135 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
24307165 |
caaaggaaggtggttccgctgc |
24307186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 23401916 - 23402040
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
23401916 |
gagaagaagccagcggagaagaaacccgctgaggagaagaagtccaccgtcgccgagaaggctccggcggagaagaagccaaaggcaggaaagaagctac |
23402015 |
T |
|
| Q |
114 |
caaaggaaggtggttccgctgcagg |
138 |
Q |
| |
|
|||||||||||||||| || ||||| |
|
|
| T |
23402016 |
caaaggaaggtggttctgcagcagg |
23402040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 23453808 - 23453690
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| | |
|
|
| T |
23453808 |
gagaagaagccagcggagaagaaacctgctgaggagaagaagtccaccgttgccgagaaagctccagcagagaagaagccaaaggctggaaagaagcttc |
23453709 |
T |
|
| Q |
114 |
caaaggaaggtggttccgc |
132 |
Q |
| |
|
| ||||||||||| ||||| |
|
|
| T |
23453708 |
ctaaggaaggtggctccgc |
23453690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 23408976 - 23408852
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||| || ||||||||||| |||||||| |||||||||| |
|
|
| T |
23408976 |
gagaagaagccagcggagaagaaacccgctgaggagaagaagtccaccgtcgccgagaaggctccggcggagaagaagcccaaggcaggaaagaagctac |
23408877 |
T |
|
| Q |
114 |
caaaggaaggtggttccgctgcagg |
138 |
Q |
| |
|
|||||||||||||||| || ||||| |
|
|
| T |
23408876 |
caaaggaaggtggttctgcagcagg |
23408852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 23868574 - 23868689
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||||| ||||| || |||||||| | |
|
|
| T |
23868574 |
gagaagaagccagcggagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctcctgctgagaagaagcccaaggctggaaagaagcttc |
23868673 |
T |
|
| Q |
114 |
caaaggaaggtggttc |
129 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
23868674 |
caaaggaaggtggttc |
23868689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 26832577 - 26832692
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| ||||||||| || |||||||| ||||||||||||||||||||||| || |||||| |||| || ||||||||||||||||| || |||||||| | |
|
|
| T |
26832577 |
gagaagaagccagcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccaaaggccggaaagaagcttc |
26832676 |
T |
|
| Q |
114 |
caaaggaaggtggttc |
129 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26832677 |
caaaggaaggtggttc |
26832692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 23885669 - 23885784
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| ||||||||| || |||||||| || |||||||||||||||||||| ||||||||| |||| || ||||||||||| ||||| || |||||||| | |
|
|
| T |
23885669 |
gagaagaagccagcagagaagaaaccagctgaggagaagaagtccaccgtcgccgagaaagctcctgctgagaagaagcccaaggctggaaagaagcttc |
23885768 |
T |
|
| Q |
114 |
caaaggaaggtggttc |
129 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
23885769 |
caaaggaaggtggttc |
23885784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 26433866 - 26433981
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| ||||||||| || |||||||| ||||||||||||||||||||||| || |||||| |||| || ||||||||||| ||||| || |||||||| | |
|
|
| T |
26433866 |
gagaagaagccagcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccgaaggccggaaagaagcttc |
26433965 |
T |
|
| Q |
114 |
caaaggaaggtggttc |
129 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26433966 |
caaaggaaggtggttc |
26433981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 26435646 - 26435761
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctac |
113 |
Q |
| |
|
|||| ||||||||| || |||||||| ||||||||||||||||||||||| || |||||| |||| || ||||||||||| ||||| || |||||||| | |
|
|
| T |
26435646 |
gagaagaagccagcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccgaaggccggaaagaagcttc |
26435745 |
T |
|
| Q |
114 |
caaaggaaggtggttc |
129 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26435746 |
caaaggaaggtggttc |
26435761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 34662459 - 34662370
Alignment:
| Q |
32 |
aagaaacccgcagaggagaagaagtccaccgttgccgagaaatctccagcagagaagaagccaaaggcagggaagaagctaccaaaggaa |
121 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||| || |||||||| ||||||||| |
|
|
| T |
34662459 |
aagaaacctgcagaggagaagaaatccaccgtcgccgagaaagctccggcagagaagaagccaaaggccggaaagaagcttccaaaggaa |
34662370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 23415028 - 23414976
Alignment:
| Q |
550 |
aagtagtgagatctggttgatcctctttgtgtatgataatggtggaattaatga |
603 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
23415028 |
aagtaatgggatctggttgatcct-tttgtgtatgataatggtggaattaatga |
23414976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 603
Target Start/End: Original strand, 24298438 - 24298506
Alignment:
| Q |
535 |
tttgaagctgtaatgaagtagtgagatctggttgatcctctttgtgtatgataatggtggaattaatga |
603 |
Q |
| |
|
||||||| ||| |||||||| | |||| ||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
24298438 |
tttgaagttgtgatgaagtaattgtatcttgttgatcctttttgtgtatgatagtggtggaattaatga |
24298506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 603
Target Start/End: Original strand, 24298816 - 24298860
Alignment:
| Q |
559 |
gatctggttgatcctctttgtgtatgataatggtggaattaatga |
603 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
24298816 |
gatcttgttgatcctttttgtgtatgataatggtaaaattaatga |
24298860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 450
Target Start/End: Original strand, 31632861 - 31632929
Alignment:
| Q |
382 |
tgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
||||||||| ||||||| ||| | |||||| ||||||| ||||||||| || || || ||||||||||| |
|
|
| T |
31632861 |
tgaattggctaagcatgttgtttgtgagggtaccaaagttgtgaccaaattcacaagctcttagatttg |
31632929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 173 - 443
Target Start/End: Original strand, 41670401 - 41670671
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||| || || ||||| || |||||||||||||||||||| || ||||| || |||||||| |||||||||| |
|
|
| T |
41670401 |
gaaacctacaagatctacatcttcaaggttctcaagcaggttcatcctgacattggtatctcaagcaaggctatggggatcatgaacagcttcatcaatg |
41670500 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||| |||||||| ||||| ||||| ||||||||||| | |||||||||||||| ||||||||||| |||| || |||||||| || | ||||| |
|
|
| T |
41670501 |
atatctttgagaagctcgctcaggaatcttccagacttgcgaggtacaacaagaagcctacaatcacttctcgggagatacagactgctgttcgtcttgt |
41670600 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttctt |
443 |
Q |
| |
|
||| || |||||| | || |||||||||||||||||||||||||| ||||| ||||| || ||||| |||| |
|
|
| T |
41670601 |
tctccccggtgaacttgctaagcatgctgtctctgagggaaccaaggctgttaccaaattcactagctctt |
41670671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 170 - 420
Target Start/End: Original strand, 40795767 - 40796017
Alignment:
| Q |
170 |
gtagaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatca |
269 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||| || || ||||| || |||||||| ||||| ||||| || ||||| || |||||||||||||||| |
|
|
| T |
40795767 |
gtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcctgacattggaatctccagcaaggctatggggatcatgaacagtttcatca |
40795866 |
T |
|
| Q |
270 |
atgatatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagact |
369 |
Q |
| |
|
|||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||||||||| || || ||||| || | || ||||||||||| || | || |
|
|
| T |
40795867 |
atgacatctttgagaagctcgctcaggaatcatccagactcgctcgctacaacaagaaacctaccatcacctctcgtgagattcagactgctgttcgtct |
40795966 |
T |
|
| Q |
370 |
tgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagc |
420 |
Q |
| |
|
|||||||| || ||| | |||||||| |||||||| |||||||||||||| |
|
|
| T |
40795967 |
cgttcttcccggcgaacttgccaagcacgctgtctccgagggaaccaaagc |
40796017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 321 - 450
Target Start/End: Original strand, 33216594 - 33216723
Alignment:
| Q |
321 |
acaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagc |
420 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||| || |
|
|
| T |
33216594 |
acaagaagccaacaatcacttcaaggaaaattcaaactgctgtcagacttgttcttcttggtgaattggccaaacatgctgtttctgagggtaccaaggc |
33216693 |
T |
|
| Q |
421 |
tgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| |
|
|
| T |
33216694 |
tgtgaccaagtttactggttcttaaatttg |
33216723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 443
Target Start/End: Original strand, 29391467 - 29391737
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||| || ||||| ||||| ||||| ||||| ||||| ||||| || || || ||||| || |||||| ||||| || ||||||||||||||||||| |
|
|
| T |
29391467 |
gaaacctataagatttacatcttcaaggttctcaaacaggttcatcctgatataggtatttcttccaaagctatggggattatgaacagtttcatcaatg |
29391566 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||| ||||| || ||||| ||| | || ||| | ||||||||||||||||| || || || || || ||||| ||||| || || || | | || |
|
|
| T |
29391567 |
atatctttgagaaactcgctcaggaagcttctagattggctcgttacaacaagaaaccgacgattacgtcgagggagattcaaacggctgtgcgtttggt |
29391666 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttctt |
443 |
Q |
| |
|
|||||| ||||||||||| || |||||||| || || |||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
29391667 |
tcttcccggtgaattggcgaaacatgctgtttccgaaggaaccaaggctgttaccaaatttacgagttctt |
29391737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 45576399 - 45576481
Alignment:
| Q |
368 |
cttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
|||||||| || | ||||||||| ||||||| ||| |||||||| ||||||||||||||||| || || || ||||||||||| |
|
|
| T |
45576399 |
cttgttctgcccgatgaattggctaagcatgttgtttctgagggtaccaaagctgtgaccaaattcacaagctcttagatttg |
45576481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 33216558 - 33216594
Alignment:
| Q |
265 |
catcaatgatatcttcgagaagcttgctcaagaatca |
301 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33216558 |
catcaatgatatcttcgtgaagcttgctcaagaatca |
33216594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 321 - 450
Target Start/End: Original strand, 47317431 - 47317560
Alignment:
| Q |
321 |
acaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgttcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagc |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||| ||| |||||||| |||||||| |
|
|
| T |
47317431 |
acaagaagccaacaatcacttcaagggaaattcaaactgttgtcagacttattcttcctggtgaattggccaaacatgttgtttctgagggtaccaaagc |
47317530 |
T |
|
| Q |
421 |
tgtgaccaagtttactagttcttagatttg |
450 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |
|
|
| T |
47317531 |
tgtgaccaagtttactagttcttaaatttg |
47317560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 429
Target Start/End: Complemental strand, 40180547 - 40180291
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||| |||||||| ||||| ||||| ||||||||||| ||||| || || || ||| | |||||||| || |||||||| |||||||||||||| || | |
|
|
| T |
40180547 |
gaaacctacaagatatacatcttcaaggttctgaaacaggttcatcctgatatcggtgtttcaagcaaggctatgggaatcatgaacagtttcattaacg |
40180448 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaatcatccagacttgctcgttacaacaagaagccaacaatcacttcaagggaaattcagactgcagtcagacttgt |
372 |
Q |
| |
|
||||||| ||||| || ||||| ||||| || | | ||| | || ||||||||||| || || ||||| ||||| ||||| ||||| || ||| | || |
|
|
| T |
40180447 |
atatctttgagaaactcgctcaggaatcgtctcgtttggctaggtataacaagaagccgacgattacttctagggagattcaaactgctgttagattggt |
40180348 |
T |
|
| Q |
373 |
tcttcctggtgaattggccaagcatgctgtctctgagggaaccaaagctgtgaccaa |
429 |
Q |
| |
|
||||||||| |||||||| || |||||||| ||||| || || || ||||| ||||| |
|
|
| T |
40180347 |
tcttcctggagaattggctaaacatgctgtttctgaagggactaaggctgttaccaa |
40180291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 47317395 - 47317431
Alignment:
| Q |
265 |
catcaatgatatcttcgagaagcttgctcaagaatca |
301 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
47317395 |
catcaatgatatcttcgtgaagcttgctcaagaatca |
47317431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 14715433 - 14715488
Alignment:
| Q |
356 |
actgcagtcagacttgttcttcctggtgaattggccaagcatgctgtctctgaggg |
411 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
14715433 |
actgcagtgagacttgttcttcctggagaattggccaagcatgttgtgtctgaggg |
14715488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 14715357 - 14715397
Alignment:
| Q |
14 |
gagatgaagccagcggaaaagaaacccgcagaggagaagaa |
54 |
Q |
| |
|
|||| ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
14715357 |
gagaagaagccagctgagaagaaacccgcagaggagaagaa |
14715397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 29684701 - 29684826
Alignment:
| Q |
173 |
gaaacatacaagatctacatattcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatcaatg |
272 |
Q |
| |
|
||||| |||||||| || |||||||| ||||| ||||||||||| || | ||||||| | ||||| ||||| |||||| | || ||||||||| | || | |
|
|
| T |
29684701 |
gaaacctacaagatatatatattcaaggttctcaaacaagttcatcctgccattggtgtttcaagtaaagctatgggagttattaacagtttcgtgaacg |
29684800 |
T |
|
| Q |
273 |
atatcttcgagaagcttgctcaagaa |
298 |
Q |
| |
|
||||||| |||| || ||||||||| |
|
|
| T |
29684801 |
atatctttaagaaactcgctcaagaa |
29684826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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