View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16954_low_3 (Length: 527)

Name: NF16954_low_3
Description: NF16954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16954_low_3
NF16954_low_3
[»] chr7 (50 HSPs)
chr7 (159-335)||(15129941-15130117)
chr7 (349-519)||(9181538-9181708)
chr7 (349-519)||(25637568-25637738)
chr7 (333-519)||(7732857-7733043)
chr7 (343-519)||(48247961-48248138)
chr7 (344-519)||(15712366-15712541)
chr7 (349-519)||(5745645-5745815)
chr7 (343-519)||(16081299-16081475)
chr7 (349-519)||(26026688-26026858)
chr7 (349-517)||(14311659-14311827)
chr7 (343-519)||(7732488-7732664)
chr7 (349-519)||(27245574-27245744)
chr7 (343-517)||(786782-786957)
chr7 (343-519)||(11971334-11971514)
chr7 (341-517)||(26048319-26048494)
chr7 (343-517)||(16081671-16081845)
chr7 (342-519)||(27245202-27245380)
chr7 (343-519)||(25637197-25637374)
chr7 (356-519)||(28687869-28688032)
chr7 (342-500)||(28687592-28687750)
chr7 (343-463)||(16917713-16917833)
chr7 (349-519)||(26026323-26026494)
chr7 (349-519)||(35161171-35161342)
chr7 (343-519)||(48247587-48247767)
chr7 (343-520)||(2758067-2758244)
chr7 (343-519)||(5746009-5746186)
chr7 (342-519)||(24929673-24929855)
chr7 (343-519)||(9181779-9181958)
chr7 (344-519)||(39388636-39388813)
chr7 (343-483)||(5333880-5334020)
chr7 (343-519)||(34595142-34595318)
chr7 (368-519)||(14311340-14311492)
chr7 (349-519)||(11973772-11973942)
chr7 (349-519)||(787152-787326)
chr7 (349-519)||(26047963-26048124)
chr7 (74-146)||(15129538-15129610)
chr7 (349-454)||(5334254-5334359)
chr7 (344-503)||(9394117-9394274)
chr7 (437-493)||(5184488-5184544)
chr7 (402-505)||(33880969-33881076)
chr7 (433-518)||(35160892-35160976)
chr7 (350-434)||(35160660-35160746)
chr7 (342-501)||(4477701-4477860)
chr7 (349-519)||(34594589-34594758)
chr7 (406-519)||(35579256-35579368)
chr7 (343-433)||(39136686-39136776)
chr7 (343-457)||(45815344-45815457)
chr7 (406-502)||(9393799-9393894)
chr7 (402-453)||(45815501-45815553)
chr7 (343-431)||(39136991-39137079)
[»] chr4 (57 HSPs)
chr4 (342-519)||(28465451-28465628)
chr4 (342-519)||(34789381-34789558)
chr4 (342-515)||(21034234-21034408)
chr4 (343-519)||(14440198-14440374)
chr4 (343-518)||(56077695-56077870)
chr4 (343-519)||(26974283-26974460)
chr4 (349-519)||(54440939-54441109)
chr4 (333-517)||(12593014-12593198)
chr4 (352-519)||(41114166-41114335)
chr4 (343-520)||(46737024-46737201)
chr4 (349-519)||(45838917-45839089)
chr4 (349-519)||(14439834-14440004)
chr4 (349-519)||(28465087-28465257)
chr4 (343-519)||(36168701-36168877)
chr4 (356-519)||(28166017-28166180)
chr4 (349-519)||(34789752-34789923)
chr4 (349-519)||(54440577-54440745)
chr4 (397-519)||(34807509-34807631)
chr4 (343-517)||(46736655-46736829)
chr4 (343-516)||(33689829-33690001)
chr4 (343-519)||(12593393-12593569)
chr4 (349-519)||(6616678-6616849)
chr4 (343-519)||(21034606-21034783)
chr4 (343-519)||(34807116-34807293)
chr4 (350-519)||(45838554-45838723)
chr4 (343-519)||(55677327-55677504)
chr4 (352-519)||(35643564-35643743)
chr4 (343-519)||(19529063-19529240)
chr4 (343-506)||(19528869-19529033)
chr4 (349-519)||(41608380-41608551)
chr4 (349-519)||(24851835-24852006)
chr4 (349-517)||(36168335-36168506)
chr4 (349-519)||(16214865-16215035)
chr4 (349-483)||(33777638-33777772)
chr4 (349-483)||(33778018-33778152)
chr4 (380-519)||(35193345-35193483)
chr4 (437-517)||(24851559-24851639)
chr4 (368-483)||(6617068-6617183)
chr4 (380-519)||(17504329-17504468)
chr4 (343-434)||(24851316-24851407)
chr4 (349-431)||(1397601-1397683)
chr4 (349-519)||(229529-229699)
chr4 (349-519)||(229167-229337)
chr4 (349-471)||(26974662-26974785)
chr4 (343-434)||(41608870-41608961)
chr4 (402-519)||(40160153-40160269)
chr4 (344-509)||(18965141-18965306)
chr4 (433-477)||(35643970-35644014)
chr4 (411-512)||(18965513-18965614)
chr4 (343-519)||(17503974-17504149)
chr4 (344-454)||(23986521-23986632)
chr4 (349-503)||(40160477-40160630)
chr4 (343-502)||(35193691-35193848)
chr4 (349-519)||(24336133-24336303)
chr4 (342-450)||(30597958-30598066)
chr4 (349-416)||(44219381-44219448)
chr4 (343-454)||(51309939-51310051)
[»] chr2 (50 HSPs)
chr2 (343-519)||(38008321-38008497)
chr2 (343-519)||(11539637-11539814)
chr2 (343-516)||(6949451-6949625)
chr2 (343-519)||(33920981-33921158)
chr2 (343-519)||(4809249-4809425)
chr2 (349-519)||(13315499-13315673)
chr2 (343-519)||(62957-63133)
chr2 (343-519)||(4356126-4356302)
chr2 (334-516)||(20127727-20127910)
chr2 (343-517)||(43160382-43160557)
chr2 (342-519)||(42192239-42192416)
chr2 (343-519)||(11540008-11540184)
chr2 (343-519)||(20128107-20128283)
chr2 (343-519)||(16952935-16953113)
chr2 (343-519)||(17060906-17061084)
chr2 (343-519)||(42192612-42192789)
chr2 (343-519)||(44219644-44219820)
chr2 (349-519)||(16175719-16175890)
chr2 (344-519)||(16953304-16953479)
chr2 (343-519)||(38007950-38008127)
chr2 (343-519)||(13399790-13399965)
chr2 (343-519)||(43216079-43216255)
chr2 (342-517)||(4355754-4355929)
chr2 (368-519)||(4808904-4809055)
chr2 (349-519)||(15551044-15551215)
chr2 (343-519)||(32418159-32418333)
chr2 (332-519)||(649516-649702)
chr2 (349-519)||(33920618-33920788)
chr2 (416-519)||(5560920-5561023)
chr2 (343-519)||(44220013-44220191)
chr2 (402-511)||(13399481-13399590)
chr2 (349-511)||(15550679-15550842)
chr2 (343-453)||(5560051-5560161)
chr2 (356-519)||(63328-63497)
chr2 (349-517)||(43160015-43160184)
chr2 (343-475)||(32418560-32418692)
chr2 (349-519)||(9330164-9330335)
chr2 (343-504)||(24140064-24140220)
chr2 (342-519)||(6949822-6949991)
chr2 (343-501)||(31797166-31797323)
chr2 (343-519)||(25335977-25336146)
chr2 (343-519)||(28143400-28143575)
chr2 (349-425)||(649801-649877)
chr2 (439-517)||(43215805-43215883)
chr2 (343-503)||(14942230-14942392)
chr2 (404-519)||(22445699-22445816)
chr2 (385-451)||(5035905-5035972)
chr2 (442-519)||(9329980-9330056)
chr2 (349-405)||(9329918-9329974)
chr2 (349-417)||(3822927-3822995)
[»] chr5 (35 HSPs)
chr5 (343-519)||(28290014-28290190)
chr5 (342-519)||(19291355-19291533)
chr5 (343-519)||(15029679-15029855)
chr5 (344-519)||(8418991-8419165)
chr5 (343-483)||(18149733-18149873)
chr5 (343-519)||(21371066-21371242)
chr5 (349-519)||(38900650-38900818)
chr5 (343-517)||(28289684-28289858)
chr5 (342-511)||(38901020-38901187)
chr5 (349-519)||(4966822-4966991)
chr5 (343-519)||(15115465-15115638)
chr5 (343-519)||(18150093-18150270)
chr5 (357-519)||(39083372-39083536)
chr5 (343-519)||(4967139-4967317)
chr5 (344-519)||(32697593-32697771)
chr5 (397-519)||(5161636-5161759)
chr5 (402-519)||(22651404-22651521)
chr5 (406-519)||(16752645-16752757)
chr5 (349-511)||(14340785-14340950)
chr5 (356-517)||(21370699-21370870)
chr5 (343-503)||(27307061-27307220)
chr5 (344-503)||(10721787-10721945)
chr5 (349-423)||(14340404-14340478)
chr5 (402-483)||(5161974-5162056)
chr5 (406-503)||(27307444-27307543)
chr5 (402-503)||(32305877-32305977)
chr5 (343-503)||(41834445-41834605)
chr5 (344-503)||(28494845-28495003)
chr5 (442-517)||(14340479-14340554)
chr5 (343-433)||(22651767-22651857)
chr5 (474-519)||(22651715-22651760)
chr5 (406-454)||(13557055-13557103)
chr5 (406-454)||(17260389-17260438)
chr5 (466-519)||(32697458-32697511)
chr5 (385-484)||(20266320-20266419)
[»] chr3 (67 HSPs)
chr3 (343-519)||(41998229-41998406)
chr3 (342-519)||(43678294-43678471)
chr3 (349-519)||(32730759-32730929)
chr3 (349-519)||(49951552-49951722)
chr3 (349-521)||(55389611-55389783)
chr3 (349-519)||(51473225-51473396)
chr3 (341-519)||(50662782-50662960)
chr3 (343-511)||(38535309-38535477)
chr3 (349-519)||(44676842-44677012)
chr3 (343-519)||(47431696-47431873)
chr3 (342-519)||(51828910-51829087)
chr3 (343-519)||(55389967-55390143)
chr3 (342-519)||(51828327-51828505)
chr3 (343-519)||(330206-330382)
chr3 (344-519)||(46013792-46013968)
chr3 (343-483)||(49720767-49720907)
chr3 (343-519)||(2051295-2051475)
chr3 (343-519)||(25534890-25535067)
chr3 (343-519)||(34104638-34104813)
chr3 (343-519)||(51827957-51828133)
chr3 (343-519)||(52375701-52375877)
chr3 (349-519)||(40839022-40839192)
chr3 (342-519)||(40275464-40275640)
chr3 (343-510)||(16701168-16701338)
chr3 (349-516)||(40838658-40838825)
chr3 (349-483)||(329852-329986)
chr3 (343-517)||(51472855-51473029)
chr3 (342-519)||(49951916-49952093)
chr3 (349-517)||(52237189-52237357)
chr3 (343-513)||(14654199-14654361)
chr3 (341-519)||(40275091-40275271)
chr3 (342-519)||(52375326-52375503)
chr3 (343-519)||(46013422-46013598)
chr3 (343-519)||(49720371-49720547)
chr3 (349-519)||(30513728-30513898)
chr3 (341-516)||(43678657-43678832)
chr3 (343-517)||(2044271-2044445)
chr3 (349-519)||(32730395-32730565)
chr3 (349-519)||(52236822-52236992)
chr3 (342-507)||(44676471-44676636)
chr3 (343-519)||(51828539-51828716)
chr3 (343-517)||(38535667-38535841)
chr3 (343-519)||(14654561-14654735)
chr3 (349-519)||(34105018-34105190)
chr3 (349-504)||(22370602-22370758)
chr3 (349-482)||(16689364-16689497)
chr3 (343-519)||(39010075-39010250)
chr3 (349-503)||(36701482-36701636)
chr3 (402-519)||(43222449-43222566)
chr3 (343-503)||(50900914-50901073)
chr3 (343-475)||(41998643-41998774)
chr3 (342-519)||(55192117-55192293)
chr3 (352-513)||(43222765-43222927)
chr3 (343-520)||(49407796-49407972)
chr3 (356-454)||(39010457-39010554)
chr3 (343-503)||(27200078-27200237)
chr3 (344-519)||(37075687-37075864)
chr3 (344-503)||(49408169-49408326)
chr3 (344-457)||(37076106-37076219)
chr3 (406-503)||(37847206-37847302)
chr3 (349-453)||(27199708-27199813)
chr3 (385-503)||(8873732-8873850)
chr3 (402-503)||(8874072-8874173)
chr3 (343-442)||(36701106-36701206)
chr3 (343-434)||(33412609-33412700)
chr3 (342-457)||(12141122-12141238)
chr3 (380-454)||(50900569-50900644)
[»] chr6 (21 HSPs)
chr6 (349-519)||(24640555-24640725)
chr6 (333-519)||(5114458-5114644)
chr6 (342-519)||(25472382-25472560)
chr6 (343-516)||(29891453-29891630)
chr6 (343-516)||(30251064-30251238)
chr6 (341-519)||(31073512-31073690)
chr6 (343-519)||(31573720-31573901)
chr6 (343-510)||(5120848-5121015)
chr6 (334-519)||(31574095-31574280)
chr6 (416-519)||(28636566-28636669)
chr6 (349-519)||(25468855-25469027)
chr6 (343-519)||(29891080-29891256)
chr6 (336-477)||(31073136-31073284)
chr6 (402-487)||(28636351-28636435)
chr6 (343-518)||(35163557-35163733)
chr6 (426-519)||(30250774-30250867)
chr6 (342-454)||(32836431-32836543)
chr6 (406-512)||(11523747-11523854)
chr6 (385-488)||(33095756-33095859)
chr6 (349-454)||(35163190-35163295)
chr6 (342-489)||(33096007-33096158)
[»] chr1 (54 HSPs)
chr1 (349-519)||(34555750-34555922)
chr1 (349-519)||(21938569-21938739)
chr1 (343-519)||(9992154-9992331)
chr1 (342-519)||(9992525-9992702)
chr1 (343-507)||(37505067-37505232)
chr1 (344-519)||(44954596-44954771)
chr1 (349-519)||(50305152-50305325)
chr1 (343-519)||(30786771-30786948)
chr1 (343-519)||(52335880-52336056)
chr1 (342-517)||(10278922-10279094)
chr1 (343-519)||(1837505-1837681)
chr1 (343-516)||(16299055-16299227)
chr1 (349-519)||(44582427-44582599)
chr1 (402-517)||(8230013-8230128)
chr1 (343-517)||(2868080-2868254)
chr1 (349-519)||(44954232-44954402)
chr1 (349-519)||(10278554-10278725)
chr1 (349-519)||(17641734-17641909)
chr1 (349-519)||(44582063-44582233)
chr1 (402-519)||(443921-444038)
chr1 (342-519)||(23340182-23340359)
chr1 (349-519)||(37421166-37421338)
chr1 (349-517)||(4080027-4080195)
chr1 (343-519)||(34555379-34555557)
chr1 (349-519)||(6224703-6224875)
chr1 (344-519)||(16298683-16298858)
chr1 (343-519)||(29438930-29439107)
chr1 (342-519)||(37505438-37505614)
chr1 (349-509)||(2867917-2868077)
chr1 (385-517)||(17641407-17641539)
chr1 (343-519)||(50926611-50926787)
chr1 (343-519)||(8229637-8229816)
chr1 (353-483)||(29439327-29439458)
chr1 (415-516)||(1744398-1744500)
chr1 (334-447)||(37421386-37421500)
chr1 (349-503)||(39485071-39485224)
chr1 (349-503)||(45048161-45048314)
chr1 (343-442)||(30787245-30787344)
chr1 (343-519)||(29021234-29021411)
chr1 (406-519)||(9833522-9833635)
chr1 (437-519)||(50304876-50304958)
chr1 (349-519)||(50926236-50926408)
chr1 (350-519)||(23526665-23526833)
chr1 (380-519)||(29020917-29021056)
chr1 (437-519)||(30787142-30787224)
chr1 (349-436)||(50304445-50304532)
chr1 (343-503)||(17088526-17088685)
chr1 (380-499)||(44291701-44291820)
chr1 (349-492)||(45048533-45048675)
chr1 (380-483)||(23526936-23527039)
chr1 (343-453)||(44802606-44802717)
chr1 (437-519)||(17088245-17088326)
chr1 (353-518)||(44291311-44291477)
chr1 (353-450)||(25274766-25274863)
[»] chr8 (35 HSPs)
chr8 (349-519)||(18049596-18049767)
chr8 (343-519)||(34799079-34799256)
chr8 (343-514)||(15256203-15256377)
chr8 (349-519)||(18428131-18428302)
chr8 (343-520)||(599867-600044)
chr8 (343-519)||(16578466-16578642)
chr8 (343-475)||(41260271-41260403)
chr8 (342-519)||(9796725-9796902)
chr8 (349-519)||(9797096-9797267)
chr8 (349-519)||(28254431-28254602)
chr8 (344-519)||(28254796-28254971)
chr8 (343-519)||(35427182-35427358)
chr8 (343-505)||(5730817-5730979)
chr8 (342-519)||(7910986-7911163)
chr8 (344-519)||(42035773-42035948)
chr8 (343-483)||(15255853-15255993)
chr8 (343-519)||(34799453-34799629)
chr8 (349-519)||(2208720-2208891)
chr8 (349-517)||(35694242-35694418)
chr8 (343-515)||(599532-599704)
chr8 (368-519)||(5731182-5731333)
chr8 (349-519)||(18049961-18050131)
chr8 (402-519)||(41260631-41260748)
chr8 (397-516)||(26252863-26252982)
chr8 (343-519)||(16578108-16578285)
chr8 (343-518)||(6115481-6115657)
chr8 (415-519)||(35426885-35426989)
chr8 (402-516)||(42036144-42036259)
chr8 (344-519)||(35693869-35694046)
chr8 (343-517)||(7910616-7910791)
chr8 (402-451)||(18674207-18674256)
chr8 (460-519)||(35163815-35163874)
chr8 (349-503)||(18805170-18805322)
chr8 (349-454)||(28877324-28877429)
chr8 (349-395)||(35426848-35426894)
[»] scaffold0712 (2 HSPs)
scaffold0712 (341-519)||(6390-6568)
scaffold0712 (402-519)||(6761-6883)
[»] scaffold0709 (2 HSPs)
scaffold0709 (341-519)||(6408-6586)
scaffold0709 (402-519)||(6779-6901)
[»] scaffold0097 (2 HSPs)
scaffold0097 (343-519)||(46266-46443)
scaffold0097 (343-519)||(46637-46814)
[»] scaffold0025 (1 HSPs)
scaffold0025 (421-519)||(78395-78493)
[»] scaffold0007 (2 HSPs)
scaffold0007 (349-519)||(205738-205907)
scaffold0007 (343-433)||(210793-210883)
[»] scaffold1432 (1 HSPs)
scaffold1432 (343-450)||(504-611)
[»] scaffold0021 (1 HSPs)
scaffold0021 (380-488)||(159282-159390)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 15129941 - 15130117
Alignment:
Q  159 tgattttgacatatgattcctaaataagttacatacttggtagaagaaaataaataaatacatacaacatattaaatatatttacatgtttattctaata 258  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15129941 tgattttgacatatgattcctaaataagttacatacttagtagaagaaaataaataaatacatacaacatattaaatatatttacatgtttattctaata 15130040  T
Q  259 aacattttacttatgagcatattagttcattaatttagagttgattctgattaatttcccatgagttttataacata 335  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  15130041 aacattttacttatgagcatattacttcattaatttatagttgattctgattaatttcccatgagttttctaacata 15130117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 9181538 - 9181708
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9181538 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttttttgcagtt 9181637  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  9181638 ttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 25637738 - 25637568
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637738 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 25637639  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||    
T  25637638 ttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 333 - 519
Target Start/End: Complemental strand, 7733043 - 7732857
Alignment:
Q  333 ataaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaacta 432  Q
    ||||||| | ||||| ||||||||||||||||||||||||| || |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  7733043 ataaaaaaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaacta 7732944  T
Q  433 tatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||  || || |||||||||||||||||||    
T  7732943 tatgttttttgcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 48248138 - 48247961
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 441  Q
    ||||| ||||||||||||||||||||||||| || ||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  48248138 ggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 48248039  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  48248038 tgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 15712366 - 15712541
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttg 15712465  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||| |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||||||| ||||||    
T  15712466 tagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 5745645 - 5745815
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||| |||||| || |||||| ||||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  5745645 attacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgttttttgcagtt 5745744  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||||||||| |||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  5745745 ttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 16081299 - 16081475
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||| | ||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  16081299 ggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgtttttt 16081398  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||| |||||||||||||||| |||  |||||||||| |||||||||||||||||| ||||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 26026858 - 26026688
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||| ||||| || || ||| ||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||    
T  26026858 attacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgttttttgcagtt 26026759  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||| ||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  26026758 ttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 349 - 517
Target Start/End: Complemental strand, 14311827 - 14311659
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||| ||| ||||| ||| || ||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14311827 attacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgcagtt 14311728  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||    
T  14311727 ttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 7732488 - 7732664
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||||||  |||||| |  |||||| |||| |||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  7732488 ggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt 7732587  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 27245744 - 27245574
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||| |||||||||| ||||||||| |  |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||    
T  27245744 attatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtattttgcaatt 27245645  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||    
T  27245644 ttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 786782 - 786957
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| |||||||||||| |||| ||||||| || |||||| ||||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |    
T  786782 ggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttt 786881  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||| ||||||||||||    
T  786882 tgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 11971334 - 11971514
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| |||||||||||||||||||| ||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11971334 ggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11971433  T
Q  443 g----cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
         ||||||||||| ||||||||||||||||| || | |||  |||| ||||| |||||||||||||||||||||||||    
T  11971434 ttttacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 341 - 517
Target Start/End: Complemental strand, 26048494 - 26048319
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| |||||||||||| ||||  | |||| || |||||| |||| |||||| | || ||||||||| |||||||| ||||||||||||||||||||    
T  26048494 atggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgtttt 26048395  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    | |||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  26048394 t-gcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 343 - 517
Target Start/End: Complemental strand, 16081845 - 16081671
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||| |||||||||  |||||| || |||||| |||| || ||| | || ||||||||||||||||||| ||| |||||||||||||||||    
T  16081845 ggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 16081746  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||| ||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 27245202 - 27245380
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt- 440  Q
    |||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || |||||||||||||||||||||||  |||| |||||||||     
T  27245202 tggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgttttt 27245301  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| ||||||| |||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  27245302 ttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 25637197 - 25637374
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| |||||||||||||||||  ||| || || ||||||||||| |||||| | || ||||||||||||||||||||||| ||||||||||| |||||    
T  25637197 ggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 25637296  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || |||||||||| |||||||||||||||||||||| ||| ||||| ||||| ||||||||  |||||||||||||||    
T  25637297 tgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 356 - 519
Target Start/End: Complemental strand, 28688032 - 28687869
Alignment:
Q  356 ttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtct 455  Q
    ||||||||||  |||||| || |||||| |||| || ||  | || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  28688032 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcacttttagtcc 28687933  T
Q  456 tatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  28687932 tatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 342 - 500
Target Start/End: Original strand, 28687592 - 28687750
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||| || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||    
T  28687592 tggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatattttttt 28687691  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||| ||||| ||||| |||||||||||||||| ||| ||||| ||||| ||||||    
T  28687692 tgcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 16917713 - 16917833
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  16917713 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 16917812  T
Q  443 gcagttttagtcttatctccc 463  Q
    |||||||||||| ||||||||    
T  16917813 gcagttttagtcatatctccc 16917833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 26026323 - 26026494
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgcagt 447  Q
    |||||||||||||||||   ||||| || | |||| |||| |||||  | || ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  26026323 attacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgcagt 26026422  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||| ||||||| ||||||    
T  26026423 tttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 35161342 - 35161171
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagt 447  Q
    |||||||||||||||||  |||||| || |||||| | || |||||| | || ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||  |||||| | || ||||||||||||    
T  35161242 tttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccacctatgct 35161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 48247587 - 48247767
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-- 440  Q
    ||||| |||||||||||||||||  |||||| |  |||||| |||| |||||| | || ||||||||| ||||||||||||| |||| ||||| ||||      
T  48247587 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatatttttt 48247686  T
Q  441 --ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
      |||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  48247687 ttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 2758244 - 2758067
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  ||||||    |||||| ||||||||| | | || ||||||||||||||||||||||| |||||||||||||||||    
T  2758244 ggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt 2758145  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgcta 520  Q
    |||| ||||||| |||| ||||||||| ||||||| ||| ||| | ||||| |||||||||||||||||| |||||||    
T  2758144 gcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgcta 2758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 5746186 - 5746009
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| || ||    || ||||||||||||||||| ||||| |||||||||||||||||    
T  5746186 ggcttaattacacttttggtccttgcattttgactaactcacgaaattgatctgc-ctcttttaaatcgaacaaaaccgtccataaactatatgtttttt 5746088  T
Q  443 --gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
      ||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  5746087 ttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 5746009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 24929855 - 24929673
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgt---- 437  Q
    |||||| |||||| ||||||||||  |||||| || |||||| |||| |||||  | || ||||||||| ||||||||||||| |||||||||| |        
T  24929855 tggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatattt 24929756  T
Q  438 -tttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||    
T  24929755 ttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 9181958 - 9181779
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || || ||| |||| || ||  | || ||||||||||||||||||||||| |||||||||||||||||    
T  9181958 ggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 9181859  T
Q  443 g---cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
        ||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  9181858 tttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 39388813 - 39388636
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tttt 442  Q
    |||| |||||||||||||||||  |||||| || |||||| |||| | |||| | || ||||||||||||||||||||||  ||||||||||||| ||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcac-agaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||| | ||||| |||||||||||||||||| ||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 343 - 483
Target Start/End: Original strand, 5333880 - 5334020
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||||| ||||||||||  | || ||||||||||||||||||||||| |||||||||||||||||    
T  5333880 ggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 5333979  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatg 483  Q
    |||||||||||| |||| |||||||||| |||||| |||||    
T  5333980 gcagttttagtcatatccccctatttcctactccagaaatg 5334020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 34595318 - 34595142
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||||||||||    | ||||||||||||||||||||||| |||||||| ||||||||    
T  34595318 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgttttt 34595219  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||  || | || ||||| |||||||| ||| ||||||||||| ||||||||||||||||||| |||||    
T  34595218 -gcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 14311340 - 14311492
Alignment:
Q  368 cattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg-cagttttagtcttatctccctat 466  Q
    ||||||||| ||||||| ||| ||||   | || |||||||| ||| |||||||||| |||||||||||||||||  |||||||| || |||||||||||    
T  14311340 cattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgtttttttacagttttaatcctatctccctat 14311439  T
Q  467 ttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||  |||| ||||| |||||||||||||||||||||||||    
T  14311440 ttccaactccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 11973942 - 11973772
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| ||||||||||  |||||| || |||  | |||| |||| | | || |||||||| |||||||||||||| |||| || ||| |||||||||||    
T  11973942 attacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttgcagtt 11973843  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||  ||||| ||||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||    
T  11973842 ttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 787326 - 787152
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttt----tttgc 444  Q
    |||||||||||||| ||   ||||| || |||||| ||||||||||| | || ||||||||||||||||||||||| |||||||| |||||    ||||     
T  787326 attacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatttgt 787227  T
Q  445 agttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||| | ||||| |||||||| ||| ||||| |||||  ||||||||||||||||| ||||||    
T  787226 agttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 26047963 - 26048124
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||| | |||||||||  || |||||| ||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||     |||    
T  26047963 attacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatgtttt-----gtt 26048057  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
         | ||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  26048058 ----gcctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 15129538 - 15129610
Alignment:
Q  74 tatgactgcaaatgggaaagtcagttaaagttggaacaattacatatgacaattgatatgataataatcaaaa 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  15129538 tatgactgcaaatgggaaagtcagttaaagttggaacaattacatatgacaattgatatgataaaaataaaaa 15129610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 454
Target Start/End: Complemental strand, 5334359 - 5334254
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| |||||| |||| | || ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  5334359 attacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgcagtt 5334260  T
Q  449 ttagtc 454  Q
    ||||||    
T  5334259 ttagtc 5334254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 503
Target Start/End: Complemental strand, 9394274 - 9394117
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| ||||||||||||||| |  |||||| || | ||||  |||||||||| | |||||| ||||||||||||| ||||| |||||||||| |||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttg 9394176  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||||||||| ||||| ||||||||||||| || |||  || ||||||| |||||||||    
T  9394175 cagttttagtcctatct-cctatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 437 - 493
Target Start/End: Original strand, 5184488 - 5184544
Alignment:
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatg 493  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5184488 ttttttacaattttagtcttatctccctatttccaactccaaaaatgcacagaaatg 5184544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 33881076 - 33880969
Alignment:
Q  402 ttttaaatcgaacaaaatc--gtccttaaactat-atgtttttt--gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggca 496  Q
    |||| ||||||||||||||  |||| |||||||| |||||||||  ||||||||||||||||| |||||||| |||||||| ||| ||||| ||||| ||    
T  33881076 ttttcaatcgaacaaaatctcgtccataaactatcatgttttttttgcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgaca 33880978  T
Q  497 gttttagtc 505  Q
    |||||||||    
T  33880977 gttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 518
Target Start/End: Original strand, 35160892 - 35160976
Alignment:
Q  433 tatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgc 518  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||||  |  |||||||||||  |||||||||||||||||||||||    
T  35160892 tatgttttttgtaattttagtcctatctccctattttcaactcca-gagcgcacagaaatgatagttttagtccaaccacctatgc 35160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 434
Target Start/End: Original strand, 35160660 - 35160746
Alignment:
Q  350 ttacacttttggtcctaccattttaacgaactcatgaaaatggtccaa--tcttttttaaatcgaacaaaatcgtccttaaactata 434  Q
    |||||||||||||||||||||||| || |||||| ||||||||||  |  | ||||||||||||||| ||||||| |||||| ||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 501
Target Start/End: Original strand, 4477701 - 4477860
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 440  Q
    |||||| |||||||| ||| ||||  |||||| || || ||| |||||||||||   || |||||||| ||| |||||||||| |||||||| ||| |||    
T  4477701 tggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg-ttt 4477799  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    |||||||||||||| || ||||   |||| ||||||| ||| |||  |||||| |||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttt 4477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 34594589 - 34594758
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||||||||  |||||| || |||||| ||||||  ||     | |||| |||| ||||||||| ||| |||||||| |||||||| |||||    
T  34594589 attacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatgttttt-gcagt 34594687  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| || | |||||||| |||||| | |||   ||| |||||  ||||||||||||||||||||||||    
T  34594688 tttagtcctacc-ccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 519
Target Start/End: Complemental strand, 35579368 - 35579256
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagt 504  Q
    ||||| ||||||| |||||| ||||||| ||||||||||||||||||||| || || ||||||| |||||| | ||| |||  |||||  |||||||||     
T  35579368 aaatcaaacaaaaccgtcct-aaactatcatgttttttgcagttttagtcatacct-cctattttcaactctaaaaacgcagggaaataacagttttaga 35579271  T
Q  505 ccaaccacctatgct 519  Q
    || ||| ||||||||    
T  35579270 cctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 433
Target Start/End: Original strand, 39136686 - 39136776
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat 433  Q
    ||||| |||||||||||| ||||  |||||| || | |||| ||||||||| |   || ||| ||||||||||||||||||| ||||||||    
T  39136686 ggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactat 39136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 457
Target Start/End: Original strand, 45815344 - 45815457
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt- 440  Q
    ||||| |||||||||||||||||  |||||| || | ||   ||||||||||    || ||| ||||||||||||| ||||| |||||||| |||||||     
T  45815344 ggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttttt 45815440  T
Q  441 ttgcagttttagtctta 457  Q
    |||||||||||||||||    
T  45815441 ttgcagttttagtctta 45815457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 9393799 - 9393894
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttta 502  Q
    ||||||||||||| |||||| ||||||| ||||||||||| ||||||||| || || ||||||| |||||||| |||  ||  |||||| ||||||||    
T  9393799 aaatcgaacaaaaccgtcct-aaactatcatgttttttgctgttttagtcctacct-cctattttcaactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 45815553 - 45815501
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactat-atg-ttttttgcagttttagt 453  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  45815553 ttttaaatcgaacaaaatcgtcc-taaactatcatgtttttttgcagttttagt 45815501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 431
Target Start/End: Complemental strand, 39137079 - 39136991
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaact 431  Q
    ||||| |||||||||||| ||||   ||||| ||   |||| |||||||||||   || ||||||||||||||||||||||| ||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 7e-72; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 28465628 - 28465451
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28465628 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 28465529  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  28465528 tgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 34789381 - 34789558
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34789381 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 34789480  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||| ||||||| ||| ||||| ||||| || ||||||||||||||||||||||    
T  34789481 tgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 342 - 515
Target Start/End: Original strand, 21034234 - 21034408
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 440  Q
    |||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  21034234 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 21034333  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccaccta 515  Q
    || ||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  21034334 ttacagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 14440374 - 14440198
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| |||||||||||||||||||| || |||| | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt 14440275  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 56077870 - 56077695
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| |||||||||||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 56077771  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgc 518  Q
    |||||||||||| |||||||||||||||||||| | ||| ||||| ||||| ||||||||||||||||||||||||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 26974283 - 26974460
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  26974283 ggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 26974382  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    | ||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||| |||||||    
T  26974383 tacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 54441109 - 54440939
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||||||||| |  | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54441109 attacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 54441010  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||| ||| ||||   |||| |||||||||||||||||||||||||    
T  54441009 ttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 333 - 517
Target Start/End: Original strand, 12593014 - 12593198
Alignment:
Q  333 ataaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaacta 432  Q
    ||||||| | ||||| ||||||||||||||||||||| ||| || |||||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  12593014 ataaaaacaaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaacta 12593113  T
Q  433 tatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||| ||||| || ||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  12593114 tatgttttttgcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 352 - 519
Target Start/End: Original strand, 41114166 - 41114335
Alignment:
Q  352 acacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttt 449  Q
    |||||||||||||||||||||| || |||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  41114166 acacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttttttgcagttt 41114265  T
Q  450 tagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||| |||||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||||    
T  41114266 tagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 46737201 - 46737024
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  46737201 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 46737102  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgcta 520  Q
    |||||||||||| ||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  46737101 gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgcta 46737024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 45839089 - 45838917
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt---gca 445  Q
    ||||||||||||||||||| ||||| || |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||    
T  45839089 attacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttgca 45838991  T
Q  446 gttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||    
T  45838990 gttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 14439834 - 14440004
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| ||||||||||  |||||| || |||||| |||| |||||  | |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  14439834 attacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttgcagtt 14439933  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  14439934 ttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 28465087 - 28465257
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||| ||||| ||||||| || |||| | |||| || ||| | || |||||||||||||||||||||||||||||||||||||||||||||||    
T  28465087 attacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 28465186  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  28465187 ttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 36168877 - 36168701
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||| |||||||||||||||| || |||||| ||||||| ||| || |||||||||| |||||||||  | |||||| ||||||||||||    
T  36168877 ggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgtttttt 36168778  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || ||||||||| ||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  36168777 gcggttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 356 - 519
Target Start/End: Original strand, 28166017 - 28166180
Alignment:
Q  356 ttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtct 455  Q
    |||||||||||| ||||| || |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  28166017 ttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttttgcagttttagtcc 28166116  T
Q  456 tatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||| || ||| |||||||||||  ||||||| | ||||||||||||||    
T  28166117 tatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 34789923 - 34789752
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagt 447  Q
    |||||||||||||||||  |||||| || |||||| |||| |||||| | || |||||||||||||||||| |||| ||||||||||||||||| |||||    
T  34789923 attacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgcagt 34789824  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  34789823 tttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 54440577 - 54440745
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| ||||||||  |||||||||||||    
T  54440577 attacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat--gttttttgcagtt 54440674  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| ||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  54440675 ttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 397 - 519
Target Start/End: Complemental strand, 34807631 - 34807509
Alignment:
Q  397 atcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggca 496  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||    
T  34807631 atcttttttaattcgaacaaaatcgtccttaaactatatgtttttggcagttttagtcctatctccctatttccaactccataaacgcatagaaatgaca 34807532  T
Q  497 gttttagtccaaccacctatgct 519  Q
    |||||||||||||||| ||||||    
T  34807531 gttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 46736655 - 46736829
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| ||||||||| |||| ||||| || |||||| ||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||    
T  46736655 ggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatgtttttt 46736754  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||| |||| || ||||||||||||| |||||||| ||| ||||||||||| |||||||||| ||||||| ||||    
T  46736755 gcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 33689829 - 33690001
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || ||||||  ||| |||||| | || ||||||||||||||||||||||||||||||||||| |||||    
T  33689829 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 33689927  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||| |||||||||||||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 12593569 - 12593393
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||||||  |||||||||| ||||||    
T  12593569 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatatttttt 12593470  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||||| |||| |||||||||||||||||| ||||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 6616678 - 6616849
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagt 447  Q
    |||||||||||||| ||| |||||| |  |||||| ||||||||||  || ||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  6616678 attacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgctgt 6616777  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||| || ||| ||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  6616778 gttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 21034783 - 21034606
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||||||  |||||| || |||||| |||| |||||| |||| ||||||||||||||||||||||| | |||||||| ||||||    
T  21034783 ggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttt 21034684  T
Q  443 -gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||  |||||||||||||||||||||| |||  |||| ||||| |||||||||||||||||||||||||    
T  21034683 tgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 34807116 - 34807293
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| |||||||||||||||||  |||||| |  |||||| |||| |||||  | || ||||||||||||||||||||||| |||| |||||||||| |    
T  34807116 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 34807215  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||||| |||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  34807216 tgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 45838554 - 45838723
Alignment:
Q  350 ttacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttt 449  Q
    ||||||||||||||||   ||||| || |||||| | || |||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45838554 ttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttt 45838653  T
Q  450 tagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||| ||||||||||||||| ||| || ||| |||||||||||  |||||| |||||||||||||||||    
T  45838654 tagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 55677504 - 55677327
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||   ||||| || |||||| |||| |||||| | || ||||||||||||||||||||||  |||||||||||||||||    
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt 55677405  T
Q  443 g-cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
      || |||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  55677404 tacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 352 - 519
Target Start/End: Original strand, 35643564 - 35643743
Alignment:
Q  352 acacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt----------- 440  Q
    ||||| |||||| ||||||||| || |||||| ||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||               
T  35643564 acactattggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatgttttttttttttttt 35643663  T
Q  441 -ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  35643664 tttgcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 19529240 - 19529063
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 441  Q
    ||||| |||||||||||| |||||||||||| || |||| || |||||| | | |||| |||||||| ||||||||||||| |||||||||||||| |||    
T  19529240 ggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgtttttt 19529141  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||  ||||||| |||||||||||  | ||| ||||||||||| ||||||||||||||||| |||||||    
T  19529140 tgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 19528869 - 19529033
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| |||||||||||||||||  |||||| || || ||| |||| |||||| | || |||||||||||| |||||||||| ||||||||||||||| |    
T  19528869 ggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 19528968  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtcc 506  Q
    ||||||||||||| |||||||||||||||||||||  ||| ||||||||||| ||||||||||||    
T  19528969 tgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 41608380 - 41608551
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt---ttgca 445  Q
    |||||||||||||||||  |||||| |  ||||||||||| |||||  | || |||||||||||||||||||||||  ||||||||||||||   |||||    
T  41608380 attacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgtttttttttgca 41608477  T
Q  446 gttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||| ||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||    
T  41608478 gttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 24852006 - 24851835
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagt 447  Q
    |||| ||||||||||||  |||||| || |||||| |||| || ||| | || ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  24852006 attatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 24851907  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||  ||||||||||||||| ||| |||||||||||  ||||||||| ||||||||||||||    
T  24851906 tttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 517
Target Start/End: Original strand, 36168335 - 36168506
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt---ttgca 445  Q
    |||||||||||| ||||  |||||| || ||| || |||| |||||  | || |||||||||||||||||||||||||||| ||||||||||   |||||    
T  36168335 attacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgtttttttttgca 36168434  T
Q  446 gttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||||||||||||||| ||||||| ||| ||| | ||||| ||||| |||||||||||||||||    
T  36168435 gttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 16215035 - 16214865
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||| ||||||||||||| |||||| |  |||| | ||||||| ||  ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  16215035 attatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatatattttttgcagtt 16214936  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| |  ||||| ||||||| |||||||| |||  |||| |||||  ||||||||||||||||||||||||    
T  16214935 ttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 349 - 483
Target Start/End: Original strand, 33777638 - 33777772
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||| |||||||||||| || |||||| ||||||| ||  || ||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  33777638 attacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatgttttttgcaatt 33777737  T
Q  449 ttagtcttatctccctatttccaactccataaatg 483  Q
    ||| || |||||| | |||| ||||||||||||||    
T  33777738 ttaatcctatctctccattttcaactccataaatg 33777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 483
Target Start/End: Complemental strand, 33778152 - 33778018
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||| || |||||||||| || |||||| ||||||| | | | || ||||||||| ||||||||||| | |||| ||||||||||||||||||    
T  33778152 attacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgttttttgcagtt 33778053  T
Q  449 ttagtcttatctccctatttccaactccataaatg 483  Q
    |||||  ||||||||||||||||||||||||||||    
T  33778052 ttagttctatctccctatttccaactccataaatg 33778018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 380 - 519
Target Start/End: Original strand, 35193345 - 35193483
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccata 479  Q
    |||| ||||||||||| | || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||| || |    
T  35193345 ctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatct-cctattttcaacttcaga 35193443  T
Q  480 aatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || ||| ||||||| ||||||||| || ||| ||||||||    
T  35193444 aacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 437 - 517
Target Start/End: Original strand, 24851559 - 24851639
Alignment:
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  24851559 ttttttgcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 368 - 483
Target Start/End: Complemental strand, 6617183 - 6617068
Alignment:
Q  368 cattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatt 467  Q
    |||||| || |||||| |||| |||||| | || |||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||     
T  6617183 cattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatattttttttgcagttttagtcctatctccctatc 6617084  T
Q  468 tccaactccataaatg 483  Q
    |||||||||| |||||    
T  6617083 tccaactccagaaatg 6617068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 380 - 519
Target Start/End: Complemental strand, 17504468 - 17504329
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccata 479  Q
    |||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||  || ||||   ||| |||||| | |    
T  17504468 ctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatgttttttgcaattttagtactacctcctatttttcaactctaga 17504369  T
Q  480 aatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || ||| ||||||| ||||||||| || ||| ||||||||    
T  17504368 aacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 24851316 - 24851407
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata 434  Q
    ||||| |||||||||||| |||||||||||| || |||||| ||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  24851316 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 1397601 - 1397683
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaact 431  Q
    |||||||||||| ||| |||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  1397601 attacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 229699 - 229529
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    ||||||||||||||| |  |||||| || | |||| ||||||||||    || ||| ||||| |||||||||||||||||||||| |||||||| |||||    
T  229699 attacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgttttt-gcagt 229601  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| || || |||| ||||| |||||||| ||| |||||||| || || ||||||| ||||||||||||||    
T  229600 tttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 229167 - 229337
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||||||||   ||||| || | |||  ||||||||||    || ||| |||| ||||||||||||||||||||||| |||||||| |||||    
T  229167 attacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgttttt-gcagt 229265  T
Q  448 tttagtcttatctccct-atttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||  || |||||| |||| |||||||||||| ||||| || || |||||||||||||||||||||||||    
T  229266 tttagttcta-ctcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgct 229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 471
Target Start/End: Complemental strand, 26974785 - 26974662
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    |||||| ||||||||||  |||||| |  || ||| |||| |||||| | || |||||||||||||||||| |||| ||||||||||||| |||||||||    
T  26974785 attacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgcagt 26974686  T
Q  448 tttagtcttatctccctatttcca 471  Q
    ||||||| ||||| ||||||||||    
T  26974685 tttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 434
Target Start/End: Complemental strand, 41608961 - 41608870
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata 434  Q
    ||||| ||||||||||||||||||||||||| || |||||| |||| |||||| | || ||||||||| ||||||||||| |||||||||||    
T  41608961 ggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 519
Target Start/End: Original strand, 40160153 - 40160269
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||||| |||||| |||||     ||||||| |||||||    
T  40160153 ttttaaatcgaacaaaaccgtccctaaactatatgttttttgcagttttagtcctacct-cctattttcaactctataaacatggagaaatgacagtttt 40160251  T
Q  502 agtccaaccacctatgct 519  Q
    || || ||| ||||||||    
T  40160252 agacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 509
Target Start/End: Original strand, 18965141 - 18965306
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| |||||| ||||| ||||  |||||||||  ||||| ||||| ||||    || ||| |||||||||||||||||||||||||||| ||| |||||    
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg-ttttt 18965239  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaac 509  Q
    |||||||||||  || |||| ||||| |||||| | ||| ||| | ||||| |||||||||||||||    
T  18965240 gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 35644014 - 35643970
Alignment:
Q  433 tatgttttttgcagttttagtcttatctccctatttccaactcca 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35644014 tatgttttttgcagttttagtcttatctccctatttccaactcca 35643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 512
Target Start/End: Complemental strand, 18965614 - 18965513
Alignment:
Q  411 gaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaac 509  Q
    |||||||||||| | |||||||| |||||||| | |||||||||| ||   |||||||| |||||||||||| ||||| ||||| |||||||||||||||    
T  18965614 gaacaaaatcgttcctaaactatcatgttttt-gtagttttagtcatactcccctattttcaactccataaacgcacataaatgacagttttagtccaac 18965516  T
Q  510 cac 512  Q
    |||    
T  18965515 cac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 17503974 - 17504149
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||| ||| ||||||||  |||||| || | |||| |||||||||||   || ||| |||| ||||| || |||||| ||||||| ||||||||    
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcct-aaactatcatgttttt 17504072  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| || || ||||||| |||||||| ||| | | ||||||| ||||||||| || ||| ||||||||    
T  17504073 tgcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 454
Target Start/End: Original strand, 23986521 - 23986632
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| ||| |||||||||||||  |||||| || | |||| ||||||||||   ||| ||| |||||||||||||  |||| |||||||| |||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgtttttt 23986620  T
Q  443 gcagttttagtc 454  Q
    ||||||||||||    
T  23986621 gcagttttagtc 23986632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 503
Target Start/End: Complemental strand, 40160630 - 40160477
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||| ||||||||||  |||||| || |||||| |||||| |||    || ||| |||| |||||||| |||||| ||||||| ||||||||||||||    
T  40160630 attacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcct-aaactatcatgttttttgcagt 40160532  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||| || ||||||| |||||||| ||| | | |||||  ||||||||||    
T  40160531 tttagtcttacct-cctattttcaactccagaaacgtagagaaaatgcagttttag 40160477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 502
Target Start/End: Complemental strand, 35193848 - 35193691
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||||||  |||||| |  | |||| |||||||||||   || ||| ||||| ||||||| ||||| |||||||| ||||||||    
T  35193848 ggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc-taaactatcatgttttt 35193750  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttta 502  Q
    ||  ||||||||| || || ||||||| |||||||| ||| ||| || |||||||||||||    
T  35193749 tgatgttttagtcatacct-cctattttcaactccagaaacgcagag-aatggcagtttta 35193691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 24336303 - 24336133
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||| ||||  |||||| || | |||| |||||||||||   || ||| ||||||||||||| ||| | |||| ||| |||||||||||  |    
T  24336303 attacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgctct 24336204  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| || | || ||||| |||||||| ||| | | ||||||||||| |||||||| | ||| ||||||    
T  24336203 tttagtccta-ccccatattttcaactccagaaacgtatagaaatggcagctttagtcctatcacatatgct 24336133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 450
Target Start/End: Complemental strand, 30598066 - 30597958
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||    |||| || |||||| | || |||| |  ||| ||||||||||||||||||||||| |||| ||||| ||| |    
T  30598066 tggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatatttttgt 30597967  T
Q  442 tgcagtttt 450  Q
    |||| ||||    
T  30597966 tgcactttt 30597958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 44219381 - 44219448
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaa 416  Q
    |||||||||||||||||   |||||||| |||||| |||| ||||||  |||||||||||| ||||||    
T  44219381 attacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 51310051 - 51309939
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| ||| |||||||||||||  |||||| || | |||| ||||||||||    || ||| |||||||||||||  |||| |||||||| ||||||||    
T  51310051 ggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgttttt 51309952  T
Q  442 tgcagttttagtc 454  Q
    | | |||||||||    
T  51309951 tacggttttagtc 51309939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 38008497 - 38008321
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38008497 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 38008398  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 11539637 - 11539814
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  11539637 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11539736  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  11539737 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 6949451 - 6949625
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| |||||| ||||||||||| |||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||    
T  6949451 ggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttt 6949550  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  6949551 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 33921158 - 33920981
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||    
T  33921158 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttt 33921059  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||    
T  33921058 tgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 4809425 - 4809249
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||    
T  4809425 ggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttttt 4809326  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||||||||| || ||| ||||| ||||| |||||||||||||||||||||||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 13315499 - 13315673
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg---ttttttgca 445  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  13315499 attacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttgca 13315598  T
Q  446 gttttagtcttatctccctatttccaactcca-taaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  13315599 gttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 62957 - 63133
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||| ||||||| ||||||| || |||||| ||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  62957 ggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt 63056  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||||||||||||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 4356302 - 4356126
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||| |||||| || |||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4356302 ggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 4356203  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| |  ||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  4356202 gcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 516
Target Start/End: Original strand, 20127727 - 20127910
Alignment:
Q  334 taaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat 433  Q
    |||||| | ||||| ||||||||||||||||||||||||| || || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20127727 taaaaaaaaggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 20127826  T
Q  434 atg-ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    ||| |||||||||||||||||| |||||||||||||||||| ||| ||| ||||| ||||| || |||||||||||||||||||    
T  20127827 atgtttttttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 343 - 517
Target Start/End: Complemental strand, 43160557 - 43160382
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 441  Q
    ||||| |||||||||| |||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||    
T  43160557 ggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttt 43160458  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||| |||||    
T  43160457 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 42192239 - 42192416
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| || |||||| ||||||||||| | || ||||||||||||||||||||||| ||||||||||||||||    
T  42192239 tggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 42192338  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||||| ||||||    
T  42192339 tgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 11540184 - 11540008
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| |||||||||| |  |||||| || |||||| ||||||||||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  11540184 ggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt 11540085  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  11540084 gcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 20128283 - 20128107
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||| |||||||||||||||||||||||||||||||    
T  20128283 ggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgtttttt 20128184  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| |||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  20128183 gcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 16952935 - 16953113
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttt 440  Q
    ||||| |||| |||||||||||||||||||| || |||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||  ||||    
T  16952935 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 16953034  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| ||||||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||||||||| |||||||||    
T  16953035 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 17060906 - 17061084
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttt 440  Q
    ||||| |||| |||||||||||||||||||| || |||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||  ||||    
T  17060906 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 17061005  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| ||||||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||||||||| |||||||||    
T  17061006 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 42192789 - 42192612
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| ||||||||||| | || ||||||||||||||||||||||| ||||||| |||||||||    
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttt 42192690  T
Q  443 -gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||| |||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  42192689 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 44219644 - 44219820
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||| ||||||| |  ||||||  |||||| ||| | ||||||||||||||||||||| ||||||||| ||||||||||||    
T  44219644 ggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgtttttt 44219743  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||| |||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 16175890 - 16175719
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagt 447  Q
    |||||||||||||||||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16175890 attacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagt 16175791  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  16175790 tttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 16953479 - 16953304
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| |||||||||||||||||  |||||| || ||||||||||| |||||| | || |||||||||||||||||  |||| |||| |||||||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttg 16953380  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  16953379 cagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 38007950 - 38008127
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| ||||||||||||||| |    
T  38007950 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 38008049  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| ||||||||    
T  38008050 tgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 13399965 - 13399790
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||| || |||| ||||||||||||| || |||||| |||||||||| | | | |||||||||||||||||| ||||||||||||||| ||||||    
T  13399965 ggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtctatt-tcttttaaatcgaacaaaattgtccttaaactatatatttttt 13399867  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||    
T  13399866 gcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 43216255 - 43216079
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||| |||||  | |||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||||||||| ||||||    
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatatttttt 43216156  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 342 - 517
Target Start/End: Original strand, 4355754 - 4355929
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| ||  ||||| |||| |||||  | || ||||||||||||||||||||||| ||||||||||||||||    
T  4355754 tggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 4355853  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  4355854 tgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 4808904 - 4809055
Alignment:
Q  368 cattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatt 467  Q
    |||||| || |||||| |||| || ||| | || ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||    
T  4808904 cattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgtagttttagtcctatcttcctatt 4809003  T
Q  468 tccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  4809004 tccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 15551215 - 15551044
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    ||||||||||||| ||||||||||| || ||||||  |||||||||  || |||||||||||||||||||||||||||||  |||||||| |||||||||    
T  15551215 attacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgcagt 15551116  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||||| ||||   ||||||||||||||||| ||||||    
T  15551115 tttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 32418159 - 32418333
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||| |||||||  |||||| || |||||| |||| |||||| | || |||  |||||||||||||||||| |||||||||| ||||||    
T  32418159 ggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatatatttttt 32418256  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 332 - 519
Target Start/End: Original strand, 649516 - 649702
Alignment:
Q  332 cataaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaact 431  Q
    |||||||| | ||||| |||||||||||||||||  ||| || || |||| | |||| |||||| | || ||||||||||||||||||||||| ||||||    
T  649516 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 649615  T
Q  432 atatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||||||||||  | |||||||||||||||||||| ||| ||||| ||||| | ||||||||||| |||||||||||    
T  649616 atatgttttttgcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 33920618 - 33920788
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| ||||||||||  |||||| || |||||| |||| || ||  | || ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  33920618 attacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgcagtt 33920717  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| ||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||| |||||||||||    
T  33920718 ttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 416 - 519
Target Start/End: Complemental strand, 5561023 - 5560920
Alignment:
Q  416 aaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccaccta 515  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  5561023 aaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 5560924  T
Q  516 tgct 519  Q
    ||||    
T  5560923 tgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 44220191 - 44220013
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||| |||||  |||||| || |||||| ||||||||||  | |||||||||||| ||||||||||||| |||||||||||||||||    
T  44220191 ggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt 44220092  T
Q  443 gcagttttagtcttatct--ccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    | |||||||||| |||||  ||||||||||||||||| ||| | ||| |||||  | ||||||||||||||||||||||    
T  44220091 gtagttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 13399481 - 13399590
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||    
T  13399481 ttttaaatggaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttt 13399580  T
Q  502 agtccaacca 511  Q
    |||| |||||    
T  13399581 agtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 349 - 511
Target Start/End: Original strand, 15550679 - 15550842
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgcagt 447  Q
    |||||||||||| ||||  |||| | || |||||| |||| |||||| | || ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  15550679 attacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 15550778  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacca 511  Q
    ||||||| ||| ||||||||| |||||||| ||| ||||||||||| |||||||||| ||||||    
T  15550779 tttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 5560051 - 5560161
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  5560051 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatatatttttt 5560150  T
Q  443 gcagttttagt 453  Q
    |||||||||||    
T  5560151 gcagttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 356 - 519
Target Start/End: Complemental strand, 63497 - 63328
Alignment:
Q  356 ttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt------gcagttt 449  Q
    ||||||||||   ||||| || |||||| ||||||||||  |||| ||||||||| ||||||||||||| |||||||||||||||||      |||||||    
T  63497 ttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgttttttttttttgcagttt 63398  T
Q  450 tagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||| ||||| |||||||||||||| | ||| ||||| ||||| |||||||||||||||||||||||||    
T  63397 tagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 517
Target Start/End: Original strand, 43160015 - 43160184
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgcagt 447  Q
    |||||| ||||||||||  |||||| |  |||||| |||| |||||  | || ||||||||||||||||||||||| |||||||||  |||| |||||||    
T  43160015 attacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgcagt 43160114  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||| ||||||||||||| |||||||| ||| ||||| ||||| ||||||||||| |||||||||||    
T  43160115 tttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 475
Target Start/End: Complemental strand, 32418692 - 32418560
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| ||||||||||||| |||||| || || ||| |||| || | | | || |||||||||||||||||||||||||||||||||| ||||||    
T  32418692 ggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatatatttttt 32418593  T
Q  443 gcagttttagtcttatctccctatttccaactc 475  Q
    ||||||||| |||||||||||||||||||||||    
T  32418592 gcagttttaatcttatctccctatttccaactc 32418560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 9330335 - 9330164
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    |||||||||||||||||  |||||| || |||||| |||| | |||  | || |||||||||||||||||||||||  |||||||||||| |||||||||    
T  9330335 attacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgcagt 9330236  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| ||||| ||||||| |||||  | |||  || ||||||| |||||||||||||||||||||||||    
T  9330235 tttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 343 - 504
Target Start/End: Complemental strand, 24140220 - 24140064
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  ||| || || |||||| ||||||||||| | |||||||||||| ||||||||||||| |||||||||     |||    
T  24140220 ggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactata-----ttt 24140126  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagt 504  Q
    |||||||||||  ||| |||||||||||||||||| ||| ||||||||||| || |||||||    
T  24140125 gcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 6949991 - 6949822
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata--tgttt 439  Q
    |||||| |||||||||||||||||  |||||| || |||||| |||| |||||| |  | |||||||| |||||||||||||| |||||||||  | |||    
T  6949991 tggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttt 6949892  T
Q  440 tttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||| ||||||| |||||| |||||          |||||||| |||||||||||||||||||||||||    
T  6949891 tttgcagttttagtcctatctccatatttcaaactc----------cagaaatgacagttttagtccaaccacctatgct 6949822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 31797323 - 31797166
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || | |||| ||||||||||    || ||| ||||||||||||| ||||| |||||||||||||||||    
T  31797323 ggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatgtttttt 31797224  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    |||||||||||| || || ||||||| |||||| | ||| ||| ||||||| |||||||    
T  31797223 gcagttttagtcctacct-cctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 25336146 - 25335977
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatat-gttttt 441  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| |  | ||||||||||||||||||||||| |||| |||||  |||||    
T  25336146 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttt 25336047  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||        | ||||||||||| || |||| |||| ||||| || ||||||||||||||||||||||    
T  25336046 tgcagttttagt--------catatttccaactacaaaaattcacataaatgacacttttagtccaaccacctatgct 25335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 28143575 - 28143400
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| ||| |||||||||||||  |||||| || | |||| |||||||||||   || ||| ||||||||||||||||||| |||||||| ||| ||||    
T  28143575 ggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg-tttt 28143477  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| || |  ||||||| |||||||| ||| ||| ||||||| ||||||||| || ||| ||||||||    
T  28143476 tgcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 649877 - 649801
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtcct 425  Q
    |||||||||||||||||| |||||| || |||||| ||||||||||| || ||||||||||||||||||||||||||    
T  649877 attacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 439 - 517
Target Start/End: Original strand, 43215805 - 43215883
Alignment:
Q  439 ttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||||||| ||||||||||||| |||||||| ||| | | ||||||| |||||||||||||||||||||||    
T  43215805 ttttgcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 14942392 - 14942230
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atg--ttt 439  Q
    ||||| ||||||||||||||| |  |||||| || | |||| ||||||||||   ||| ||| |||||||||||||| |||| |||| ||| |||  |||    
T  14942392 ggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttttt 14942293  T
Q  440 tttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||||||||||||| || |  ||||||| |||||||| ||||||| |||||| ||||||||||    
T  14942292 tttgcagttttagtccta-catcctattttcaactccagaaatgcagagaaatcgcagttttag 14942230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 519
Target Start/End: Original strand, 22445699 - 22445816
Alignment:
Q  404 ttaaatcgaacaaaatcgtccttaaactatatg---ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||||||||||| |||||||||| || |||   |||||| ||||||||||  ||||||||||||| ||||| || |||  |||| ||||| ||||||    
T  22445699 ttaaatcgaacaaaaccgtccttaaatta-atgtttttttttacagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttt 22445797  T
Q  501 tagtccaaccacctatgct 519  Q
    ||||| |||||||||||||    
T  22445798 tagtcaaaccacctatgct 22445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 5035905 - 5035972
Alignment:
Q  385 gaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagtttta 451  Q
    |||||||||||  ||||||||||||||||||||| ||||| |||||||| || |||||||||||||||    
T  5035905 gaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagtttta 5035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 442 - 519
Target Start/End: Original strand, 9329980 - 9330056
Alignment:
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| |||||||| ||||||| |||||||||||| | ||| ||||||||||| |||||| ||| ||||||| ||||||    
T  9329980 tgcacttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagt-caaccacttatgct 9330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 9329918 - 9329974
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatctttttt 405  Q
    ||||||||||||||||||| ||||| || ||||||  |||||||||| |||||||||    
T  9329918 attacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 3822927 - 3822995
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaa 417  Q
    |||||||||||||||||  ||||||||| ||||||||||| || |||   | |||||||| ||||||||    
T  3822927 attacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 6e-69; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 28290190 - 28290014
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  28290190 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgtttttt 28290091  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 19291355 - 19291533
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt- 440  Q
    |||||| ||||||||||||||||||| ||||| |  ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  19291355 tggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 19291454  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  19291455 ttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 15029855 - 15029679
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||| ||||||| || |||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  15029855 ggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 15029756  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||   ||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 8419165 - 8418991
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| ||||||||||||||||||||||||| || |||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat-ttttttg 8419067  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||| || ||||| ||||| ||||||||||    
T  8419066 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgct 8418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 483
Target Start/End: Original strand, 18149733 - 18149873
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| |||||||||||  || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18149733 ggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18149832  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatg 483  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  18149833 gcagttttagtcctatttccctatttccaactccataaatg 18149873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 21371242 - 21371066
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || ||||||| ||| |||||| | || ||||||||| ||||||||||||| |||||||||||||||||    
T  21371242 ggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgtttttt 21371143  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| |||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||| ||||||||||||||    
T  21371142 gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 38900650 - 38900818
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| ||||||| ||| | || ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  38900650 attacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcagtt 38900749  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||||||| | ||| ||||| |||  ||||||||||||||||||||    
T  38900750 ttagtcctatctccctatttccaactccataaacgtacataaatgacag--ttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 28289684 - 28289858
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||||| |||| | |||  | || ||||||||||||||||||||||| |||| ||||||||||||    
T  28289684 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 28289783  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
     ||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  28289784 ccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 342 - 511
Target Start/End: Complemental strand, 38901187 - 38901020
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||||| ||||||| || ||  || ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  38901187 tggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgttttt 38901088  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacca 511  Q
    ||||||||||||  ||||||| |||||||||  ||| ||| ||||| ||||| |||||||||||||||||    
T  38901087 tgcagttttagttatatctccttatttccaa--ccagaaacgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 4966822 - 4966991
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| |||||| || |   || ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  4966822 attacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagcagtt 4966921  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||| ||||||||||||||| | ||||||||||||||| ||||||| | |||||||||||||||    
T  4966922 ttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 15115638 - 15115465
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||||| ||||||||||| | || |||||||||||||||||||||||||||||||||   |||||    
T  15115638 ggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactata---ttttt 15115542  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||| ||||||||||||||| | ||| ||||| ||||| |||||||||| ||||||| ||||||    
T  15115541 gcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 18150270 - 18150093
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||| || ||||   ||||| || |||||| |||| |||||| | || ||||||||||||||||||| ||| |||||||||||||||||    
T  18150270 ggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 18150171  T
Q  443 -gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| | |||||||| ||||||||||||||    
T  18150170 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 357 - 519
Target Start/End: Original strand, 39083372 - 39083536
Alignment:
Q  357 tttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgt--tttttgcagttttagtc 454  Q
    |||| ||||| |||||| || |||||| ||||||||||| || |||||||||||||||||||| || |||||||||||| |  |||||||||||||||||    
T  39083372 tttgatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttgcagttttagtc 39083471  T
Q  455 ttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     ||||||| |||||||||||||| |||  |||||||||| |||||||||||||| ||| ||||||    
T  39083472 atatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgct 39083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 4967317 - 4967139
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--tt 440  Q
    ||||| |||||||||||||||||  |||||| || ||||||  |||||||||  | || ||||||||||||||||||||||| |||||||||||||  ||    
T  4967317 ggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 4967218  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| ||| |||||||||| ||||| | ||| ||||| |||||  ||||||||||||||||| ||||||    
T  4967217 ttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 32697771 - 32697593
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt--- 440  Q
    |||| ||||||||||||||| |  |||||| || |||||| |||| |||||| | || |||||||||||||| |||||||| |||||||||||||||       
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatt 32697672  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||  || ||||||||||||||||||| |||  |||||||||| ||  |||||||||||||||||||||    
T  32697671 ttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 519
Target Start/End: Original strand, 5161636 - 5161759
Alignment:
Q  397 atcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggc 495  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||| || ||| ||| ||||||| |    
T  5161636 atcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgac 5161735  T
Q  496 agttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||||||||||    
T  5161736 agttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 519
Target Start/End: Original strand, 22651404 - 22651521
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||||| ||||||| | |||||||||||| ||||||| ||||||||||||| || |||| ||||| |||||||| ||| ||||| ||||||||||||    
T  22651404 ttttaaatcaaacaaaaccatccttaaactatcatgtttt-tgcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttt 22651502  T
Q  501 tagtccaaccacctatgct 519  Q
    |||||||||||||||||||    
T  22651503 tagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 519
Target Start/End: Original strand, 16752645 - 16752757
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtc 505  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| || || ||||||| |||||||||||| ||| |||||||  |||||||| |    
T  16752645 aaatcgaacaaaatcgtccataaactatatgttttttgcagtttttgtcatacct-cctattttcaactccataaacgcaaagaaatgatagttttagac 16752743  T
Q  506 caaccacctatgct 519  Q
    | ||| ||||||||    
T  16752744 ctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 349 - 511
Target Start/End: Complemental strand, 14340950 - 14340785
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt---gca 445  Q
    |||||| ||||||| ||  |||||| || |||||| |||| |||||  |  | ||||||||||||||||||||||| |||||||||| ||||||   | |    
T  14340950 attacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttttgta 14340851  T
Q  446 gttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacca 511  Q
    ||||||||| ||||||| |||||||||||||| ||| | | ||||||| ||||||||||| |||||    
T  14340850 gttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 517
Target Start/End: Original strand, 21370699 - 21370870
Alignment:
Q  356 ttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat--------atgttttttgcagt 447  Q
    |||| ||||||| ||||| || |||| | |||||||||   ||||||||||||||||||||||||||| |||||||||        || ||||||||| |    
T  21370699 tttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactattattttttattttttttgcaat 21370798  T
Q  448 tttagtcttatctccctatttccaactccataaatgc--acagaaatggcagttttagtccaaccacctatg 517  Q
    ||||||| |||||||||||||||||||||| ||| ||  | | ||||| |||||||||||| ||||||||||    
T  21370799 tttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatg 21370870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 343 - 503
Target Start/End: Original strand, 27307061 - 27307220
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||| ||  |||||| || |||| ||||||||||||   | | ||| |||| |||||||||| |||| ||||||| ||||||||    
T  27307061 ggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcct-aaactatcatgttttt 27307159  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||||||||| || ||||||| |||||||| ||| ||| ||||||| |||||||||    
T  27307160 tgcagttttagtcttacct-cctattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 344 - 503
Target Start/End: Original strand, 10721787 - 10721945
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| |||||| ||||||||||  |||||| || | |||| ||||||||||   ||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 10721885  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||||| || || ||||||| |||||||| ||| | | ||||||| |||||||||    
T  10721886 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 14340404 - 14340478
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtc 423  Q
    |||||| |||||||||||||||||| |  |||||| ||||||||||| |||||||||||||||||||||||||||    
T  14340404 attacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 5162056 - 5161974
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagttttagtcttatctccctatttccaactccataaatg 483  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| |||||||| |||| ||||| || |||||    
T  5162056 ttttaaatcgaacaaaatcgtccctaaattatatgtttttttgcaattttagtcctatctcccaatttacaacttcagaaatg 5161974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 27307543 - 27307444
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactatatgtt---ttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttta 502  Q
    ||||||||||||| ||||| |||||||||||||   ||||| |||||||||| || || ||||||| |||||||| ||||||| ||||||| || |||||    
T  27307543 aaatcgaacaaaaccgtccataaactatatgtttttttttgtagttttagtcctacct-cctattttcaactccagaaatgcagagaaatgacattttta 27307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 32305877 - 32305977
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| || || | ||||| |||||||| |||  || ||||||| ||||||    
T  32305877 ttttaaatcgaacaaaatcgtccctaaactatcatg-tttttgcagttttagtcctacct-cttattttcaactccagaaacacagagaaatgacagttt 32305974  T
Q  501 tag 503  Q
    |||    
T  32305975 tag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 41834605 - 41834445
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atg-tttt 440  Q
    ||||| |||||||||||||||||  |||||| || | |||| |||||||||||   || ||| | ||||||||||| ||||| |||||||| ||| ||||    
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttttt 41834507  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||||||| || || ||||||| ||||||   ||| ||| ||||||| |||||||||    
T  41834506 ttgcagttttagtcctacct-cctattttcaactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 503
Target Start/End: Original strand, 28494845 - 28495003
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| |||||||||||||||||  |||||| || |  ||| ||||||||| |   || ||| |||||||||||||  ||||| ||||||| |||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtcct-aaactatcatgtttttt 28494943  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||||| || || ||||||| |||||||| ||| ||| |||| || || ||||||    
T  28494944 gcagttttagtcctacct-cctattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 517
Target Start/End: Original strand, 14340479 - 14340554
Alignment:
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||| || |||||| ||||||||||||| | |||   ||||||||| |||||||||||||||||| ||||    
T  14340479 tgcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatg 14340554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 433
Target Start/End: Complemental strand, 22651857 - 22651767
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat 433  Q
    ||||| ||||||||||| |||||  |||||| || | |||| ||||||||| |   |||||| ||||||||||||||||||| ||||||||    
T  22651857 ggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 22651760 - 22651715
Alignment:
Q  474 tccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 13557055 - 13557103
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtc 454  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  13557055 aaatcaaacaaaatcgtc-ttaaactatcatgttttttgcagttttagtc 13557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 17260389 - 17260438
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtc 454  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||||||||    
T  17260389 aaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtc 17260438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 32697458 - 32697511
Alignment:
Q  466 tttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||  |||||||||| ||  |||||||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 20266419 - 20266320
Alignment:
Q  385 gaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatg 483  Q
    ||||||||||   ||| ||| ||||||||||||||||||| |||||||| ||| || ||| |||||||||| || | |||||||| || ||||| |||||    
T  20266419 gaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggttgttgtagttttagtccta-ccccctattttcacctccaaaaatg 20266321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 4e-67; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 41998229 - 41998406
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  41998229 ggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41998328  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  41998329 tgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 43678294 - 43678471
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||||||||||||| || |||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43678294 tggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 43678393  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||| ||||| |||||||||||||||||||||||||    
T  43678394 tgcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 32730929 - 32730759
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32730929 attacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatgttttttgcagtt 32730830  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| || |||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  32730829 ttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 49951552 - 49951722
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49951552 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaatt 49951651  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||    
T  49951652 ttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 349 - 521
Target Start/End: Original strand, 55389611 - 55389783
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||| ||||||  || |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55389611 attacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 55389710  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgctac 521  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||    
T  55389711 ttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgctac 55389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 51473396 - 51473225
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    |||||||||||| |||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51473396 attacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagt 51473297  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  51473296 tttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 341 - 519
Target Start/End: Complemental strand, 50662960 - 50662782
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| |||| |||||||||||||||||||| || |||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  50662960 atggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 50662861  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| || |||||||||| |||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  50662860 ttgcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 511
Target Start/End: Original strand, 38535309 - 38535477
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38535309 ggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 38535408  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacca 511  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||| ||||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 44677012 - 44676842
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44677012 attacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaatt 44676913  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||| |||||| |||||||| ||| ||||| ||||| ||||||||||| |||||||||||||    
T  44676912 ttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 47431696 - 47431873
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||  | || |||||||||||||||||||||| |||||||||||| |||||    
T  47431696 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttt 47431795  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  47431796 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 51829087 - 51828910
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||||||| ||| ||||| |  |||||| ||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||    
T  51829087 tggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgttttt 51828988  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||    
T  51828987 tgcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 55390143 - 55389967
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  ||||||||| || ||| ||||||||||| | |||||||||||| ||||||||||||  |||||||||||||||||    
T  55390143 ggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgtttttt 55390044  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    | |||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  55390043 gtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 51828505 - 51828327
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tt 440  Q
    |||||| ||||||||||||||||||||| ||| || |||||| ||||||||||  || |||||||||||||||||||| |||||||||||||||||| ||    
T  51828505 tggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgttttt 51828406  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| |||||||||    
T  51828405 ttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 330382 - 330206
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||| |||||||||  |||||| || |||||| ||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||    
T  330382 ggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt 330283  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||| | ||| ||||||||||| |||||||| ||||||||||||||||    
T  330282 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 46013968 - 46013792
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt- 442  Q
    |||| |||||||||||||| ||| |||||| || |||||   |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||     
T  46013968 gcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 46013869  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  46013868 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 483
Target Start/End: Complemental strand, 49720907 - 49720767
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||| ||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  49720907 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 49720808  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatg 483  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  49720807 gcagttttagtcttatctccctatttccaactccagaaatg 49720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 2051295 - 2051475
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg----tt 438  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    ||    
T  2051295 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttttt 2051394  T
Q  439 ttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| || ||| |||||||||| ||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  2051395 ttttgcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 2051475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 25534890 - 25535067
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtcct-taaactatatgttttt 441  Q
    ||||| |||||||||||||||||  |||||| || || ||||||||||||||| | || |||||||||||||||||||||||  |||| |||||||||||    
T  25534890 ggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgttttt 25534989  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  25534990 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 34104638 - 34104813
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||||||||||||||| || |||||||||| || |||||| ||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  34104638 ggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgtttttt 34104737  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||| |||||||||| ||||| ||| ||||| ||||| || ||||||||||||||||||||||    
T  34104738 gcagttttagtcatatct-cctatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 51827957 - 51828133
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  51827957 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 51828056  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| |||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  51828057 gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 52375877 - 52375701
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| ||||||||||| | || |||||||| |||||||||||||| |||||||||||||||||    
T  52375877 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgtttttt 52375778  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||  ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||    
T  52375777 gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 40839192 - 40839022
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| ||||||||||  | || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  40839192 attacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagtt 40839093  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||| || ||||||    
T  40839092 ttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 40839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 40275640 - 40275464
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||  ||||||||||||||||    
T  40275640 tggcttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttt 40275542  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||| ||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  40275541 tgcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 510
Target Start/End: Complemental strand, 16701338 - 16701168
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---t 439  Q
    ||||| |||||| |||||||||||||||||| || |||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||   |    
T  16701338 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttttt 16701239  T
Q  440 tttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacc 510  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||  |||||  ||||||||||||||||    
T  16701238 tttgcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 349 - 516
Target Start/End: Original strand, 40838658 - 40838825
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||| ||||  |||||| || |||||| ||||||||||  | || ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  40838658 attacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgttttttgcagtt 40838757  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    |||||| |||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  40838758 ttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 349 - 483
Target Start/End: Original strand, 329852 - 329986
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||| || ||||||| || |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  329852 attacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 329951  T
Q  449 ttagtcttatctccctatttccaactccataaatg 483  Q
    |||||| ||||||||| ||||||||||||||||||    
T  329952 ttagtcctatctccctgtttccaactccataaatg 329986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 51472855 - 51473029
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| ||||||||||||  |||||| || ||||||||||| |  ||| | || ||||||||| |||||||| |||| |||| ||||||||||||    
T  51472855 ggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttttt 51472954  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 49952093 - 49951916
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||| ||||||||||  |||||| || |||||| |||| |||||  | || |||||||||||||||||||||| |||||||| ||||||||    
T  49952093 tggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgttttt 49951994  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  49951993 tgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 349 - 517
Target Start/End: Complemental strand, 52237357 - 52237189
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||||| ||||||||||| | || ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  52237357 attacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcagtt 52237258  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||| |||||||||||||| ||||||  ||| ||||||||||| ||||||||||| |||||| ||||    
T  52237257 ttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatg 52237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 343 - 513
Target Start/End: Original strand, 14654199 - 14654361
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| | |||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14654199 ggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt 14654298  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacc 513  Q
    ||| |||||||        ||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  14654299 gcatttttagt--------cctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 519
Target Start/End: Original strand, 40275091 - 40275271
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| |||||||||||||||||  |||||| || |||||| ||||||||||| | || |||||||||||||||||| |||| |||||| ||||||||    
T  40275091 atggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgtttt 40275190  T
Q  441 --ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
      |||||||||||||| ||||||| |||||| ||||||| ||| ||||||||||| |||||||||||||||||| ||||||    
T  40275191 ttttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 52375326 - 52375503
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  ||||||||| || ||| ||||||||||  | || |||||||| |||||||||||||| ||||||||||||||||    
T  52375326 tggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgttttt 52375425  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||  |||||||||||||| ||||||| ||| ||| ||||||| ||||||||||| |||||| ||||||    
T  52375426 tgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 46013422 - 46013598
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||||||| |||| ||||||||||||    
T  46013422 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 46013521  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| | |||||||||||||||||||||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 49720371 - 49720547
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||| |||| |||||||    
T  49720371 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgtttttt 49720470  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||| |||||| ||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 30513728 - 30513898
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt-tgcagt 447  Q
    |||||| ||||||||||  |||||| || |||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  30513728 attacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtc-ttaaactatatgtttttctgcagt 30513826  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| ||||||| |||||| |||| || ||| ||||||||||| ||||||||||||| |||||||||||    
T  30513827 tttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 341 - 516
Target Start/End: Complemental strand, 43678832 - 43678657
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| |||||||||||||||||  |||||| |  |||||| |||  |||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  43678832 atggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgtttt 43678733  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    ||||||||| |||| ||||| |||||||||||||| | ||| ||||| ||||| |||||||||| |||||||||||    
T  43678732 ttgcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 2044271 - 2044445
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||| |||||||||| ||  |||||| || |||||||||||||||||  | || ||||||||||||||||||||||| |||| ||||||||||||    
T  2044271 ggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttttt 2044370  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    | |||||||||| |||||||||||||||||||| | ||| ||||| ||||  |||||||||||||||||||||||    
T  2044371 ggagttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 32730395 - 32730565
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || ||||| ||||| |||||| | || |||||||| |||||||||||||| |||||||||||||||||||||||    
T  32730395 attacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgcagtt 32730494  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| || |||||||||||||||||||| | ||| ||||| ||||| |||||||||| ||| ||||||||||    
T  32730495 ttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 52236822 - 52236992
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||| |||||  |||||| |  || ||| ||||||||||  | || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  52236822 attacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagtt 52236921  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||| |||||||| |||||||| ||| ||||||||||| |||||||||||||| ||||||||||    
T  52236922 ttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 342 - 507
Target Start/End: Original strand, 44676471 - 44676636
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| || ||||||||||| || ||  | || ||||||||||||||||| ||||| ||||||||||||||||    
T  44676471 tggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgttttt 44676570  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtcca 507  Q
    ||||| ||||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||    
T  44676571 tgcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 51828539 - 51828716
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| |||||||||||||||||  |||||| || || | | |||| |||||  | || ||||||||||||||||||||||| ||||||||||||||| |    
T  51828539 ggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttt 51828638  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| |||||||    
T  51828639 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 343 - 517
Target Start/End: Complemental strand, 38535841 - 38535667
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| |||||||||||   |||||| || |||| | |||| | |||| |||| |||||||||||| |||||||||| |||||||||||||||||    
T  38535841 ggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 38535742  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| ||||  |||||||||||||||||| ||||    
T  38535741 gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 14654735 - 14654561
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||  | | || ||||||||||||||||||||||| ||||||||  |||||||    
T  14654735 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactat--gtttttt 14654638  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||| ||||| |||||||||| |||||| |||||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 34105190 - 34105018
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcag 446  Q
    |||||||||||||||||  |||||| || |||| | |||  ||||||   || ||||||||||||||||||||||| |||||||||||||||||  ||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  447 ttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||  |||||| ||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||    
T  34105090 ttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 349 - 504
Target Start/End: Original strand, 22370602 - 22370758
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagt 447  Q
    |||||||||||||||||  |||||| || |||||| ||||||||||| | |||||||||| | ||||||||||||| ||||||||||| |||||||||||    
T  22370602 attacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgcagt 22370701  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagt 504  Q
    ||||||| ||||||| ||| |||||||||| ||| ||||||||||  ||||||||||    
T  22370702 tttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 482
Target Start/End: Original strand, 16689364 - 16689497
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| ||||||||||| |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  16689364 attacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttttgcagtt 16689463  T
Q  449 ttagtcttatctccctatttccaactccataaat 482  Q
    |||||| |||| |||||||||| |||||| ||||    
T  16689464 ttagtcctatcaccctatttccgactccagaaat 16689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 39010075 - 39010250
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||||||  |||||| || ||||||  ||| || ||  | || |||||||||||||||||| || |||||||| ||||||||||    
T  39010075 ggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgtttttt 39010174  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||  |||||||||||| |||||||||||| ||||| |||||  ||||||||||||||||| ||||||    
T  39010175 gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 503
Target Start/End: Complemental strand, 36701636 - 36701482
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||||||||  |||||| || | |||| ||||||||||   ||| ||| ||||||||||||||| ||| |||||||| ||||||||||||||    
T  36701636 attacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgcagt 36701537  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||||| || || ||||||| |||||||| |||  || |||||||||||||||||    
T  36701536 tttagtcatacct-cctattttcaactccagaaacacatagaaatggcagttttag 36701482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 402 - 519
Target Start/End: Original strand, 43222449 - 43222566
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctcccta-tttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| || || | ||||| ||| |||||||| ||| | ||| ||||| ||||||    
T  43222449 ttttaaatcgaacaaaatcgtccctaaactatatgttttttgcatttttaatccta-ccccctatttttcaactccagaaacgtacaaaaatgacagttt 43222547  T
Q  501 tagtccaaccacctatgct 519  Q
    |||||||||||||||||||    
T  43222548 tagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 50901073 - 50900914
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || | ||||  ||||||| ||   || ||  ||||||||||||| ||||| |||||||||||||||||    
T  50901073 ggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatgtttttt 50900974  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||| ||| || || ||||||| |||||||||||| ||| |||||| ||||||||||    
T  50900973 gcagtttttgtcctacct-cctattttcaactccataaacgcaaagaaattgcagttttag 50900914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 343 - 475
Target Start/End: Complemental strand, 41998774 - 41998643
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| |||||||||||||||||  |||||| || |||| | |||| |||||| | || ||||||||||||||||||||||| | ||||||||| |||||    
T  41998774 ggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttttt 41998676  T
Q  442 tgcagttttagtcttatctccctatttccaactc 475  Q
    ||||||||||||| || |||||||||| ||||||    
T  41998675 tgcagttttagtccta-ctccctattttcaactc 41998643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 55192117 - 55192293
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||| ||||   |||||| || | |||| ||||||||||    || ||| ||||| ||||||| ||||| ||||||||||||||||    
T  55192117 tggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatgttttt 55192216  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || |||||||||| || || ||||||| |||||||| ||| ||| ||||||| ||||||||| || ||| ||||||||    
T  55192217 tgtagttttagtcctacct-cctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 43222927 - 43222765
Alignment:
Q  352 acacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagtttt 450  Q
    ||||||||||||||  |||||| || | | || ||||||||||    || ||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  43222927 acacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgtttttttgcagtttt 43222828  T
Q  451 agtcttatctcccta-tttccaactccataaatgcacagaaatggcagttttagtccaaccacc 513  Q
    ||||  | | ||||| ||| |||||||| ||| ||||| ||||| |||||||||||||||||||    
T  43222827 agtccca-ccccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 520
Target Start/End: Original strand, 49407796 - 49407972
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || | |||| ||||||||||    || ||| |||| |||||||| ||||| |||||| |||||||| |    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgt 49407895  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgcta 520  Q
     ||||||||||| || || ||||||| |||||||| ||| ||| ||||||| || |||||| || ||| |||||||||    
T  49407896 acagttttagtcatacct-cctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 39010554 - 39010457
Alignment:
Q  356 ttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtc 454  Q
    ||||| |||| ||||||| || | |||| ||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||    
T  39010554 ttttgatcctgccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaatccgtatgtttttt-cagttttagtc 39010457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 27200237 - 27200078
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||||||  |||||| || | |||| ||||||||| |   || ||| ||||||||||| | ||||| |||||||| ||||||||    
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactatcatgttttt 27200139  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||||||||||| || || ||||||| |||||||| ||| ||| ||||||| ||| |||||    
T  27200138 tgcagttttagtcatacct-cctattttcaactccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 37075687 - 37075864
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg---tttt 440  Q
    |||| |||||||||||||||    |||||| || |||||| |||||||||||   || ||| ||||| ||||||  ||||| |||||||||||   ||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgttttttt 37075786  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| || || | ||||| |||||||| ||| ||| ||||||| | ||||||| || ||| ||||||||    
T  37075787 ttgcagttttagtcctacct-cttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 503
Target Start/End: Complemental strand, 49408326 - 49408169
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| |||||||||||||| ||  |||||| || | |||| |||||||||    ||| ||| |||||||||||||  ||||| ||||||| |||||||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcct-aaactatcatgtttttt 49408228  T
Q  443 -gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
     |||||||||||| || |||   |||| |||||||| ||| ||| |||||||||||||||||    
T  49408227 tgcagttttagtcctacctc---attttcaactccagaaacgcaaagaaatggcagttttag 49408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 457
Target Start/End: Complemental strand, 37076219 - 37076106
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 442  Q
    |||| |||||| ||||||||||  |||||| |  | |||| |||||||||||   || ||| ||||||||||||||||||| |||||||| |||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 37076121  T
Q  443 gcagttttagtctta 457  Q
     || |||||||||||    
T  37076120 acatttttagtctta 37076106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 37847302 - 37847206
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||||||||||  ||||| |||||||| |||||||| |||||||||||| ||||| ||||||| ||||| || ||||||| ||||||| || ||||||    
T  37847302 aaatcgaacaaagccgtccctaaactatcatgttttt-gcagttttagtcctatct-cctattttcaacttcagaaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 453
Target Start/End: Original strand, 27199708 - 27199813
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagt 447  Q
    |||||| ||||||||||  |||||| || | |||| ||||||||||    || ||| ||||||||||||| ||||  ||||||||||| |||||||||||    
T  27199708 attacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttttttgcagt 27199807  T
Q  448 tttagt 453  Q
    ||||||    
T  27199808 tttagt 27199813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 503
Target Start/End: Original strand, 8873732 - 8873850
Alignment:
Q  385 gaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atg-ttttttgcagttttagtcttatctccctatttccaactccataaat 482  Q
    ||||||||||   ||| ||||||||||||||||| ||| | ||| |||| ||| ||||||||||||||||||||| || ||||||| ||||| || |||     
T  8873732 gaaaatggtcatgtctcttttaaatcgaacaaaaccgt-cataacctatcatgtttttttgcagttttagtcttacct-cctattttcaacttcagaaac 8873829  T
Q  483 gcacagaaatggcagttttag 503  Q
    ||| ||||||| |||||||||    
T  8873830 gcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 503
Target Start/End: Complemental strand, 8874173 - 8874072
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgtt--ttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtt 499  Q
    ||||||||||||||||| | ||| |||||||||||||  |||||||||||||||  || ||  |||||| |||||||| ||| ||| ||||||| |||||    
T  8874173 ttttaaatcgaacaaaaccttccctaaactatatgttttttttgcagttttagttctacct-tctattttcaactccagaaacgca-agaaatgacagtt 8874076  T
Q  500 ttag 503  Q
    ||||    
T  8874075 ttag 8874072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 36701106 - 36701206
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||||||  |||||| |  |||||| ||||||| ||    || ||| ||||||||||||||||||| |||||||| ||||||||    
T  36701106 ggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgttttt 36701205  T
Q  442 t 442  Q
    |    
T  36701206 t 36701206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Complemental strand, 33412700 - 33412609
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata 434  Q
    ||||| |||||||||||||||||  |||||| |  | |||| ||||||||| |  ||| |||  |||||||||||||||||| |||||||||    
T  33412700 ggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 12141238 - 12141122
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 440  Q
    |||||| |||||||||||| ||||  |||||| |  |  ||| | ||||||||| | || ||| ||||||||||||| | ||  |||||||| |||||||    
T  12141238 tggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactatcatgtttt 12141139  T
Q  441 ttgcagttttagtctta 457  Q
    ||||||||||| |||||    
T  12141138 ttgcagttttaatctta 12141122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 50900569 - 50900644
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt-gcagttttagtc 454  Q
    |||| ||||||||||| | || ||| ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  50900569 ctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttcgcagttttagtc 50900644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 24640725 - 24640555
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||| |||||||||||||||||||| |  |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24640725 attatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 24640626  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||| ||||| |||||||||||||||||||    
T  24640625 ttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 333 - 519
Target Start/End: Original strand, 5114458 - 5114644
Alignment:
Q  333 ataaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaacta 432  Q
    |||||| || ||||| |||||| ||||| |||||||||||| |  |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5114458 ataaaatgaaggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 5114557  T
Q  433 tatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| |||||||||| ||||||||||||||    
T  5114558 tatgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 25472560 - 25472382
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tt 440  Q
    |||||| |||||||||||| |||||||||||| || |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||    
T  25472560 tggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 25472461  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| |||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  25472460 ttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 516
Target Start/End: Complemental strand, 29891630 - 29891453
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatctttttta----aatcgaacaaaatcgtccttaaactatatgtt 438  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||||||||||||  | || ||||    ||| ||||||||||||||||||||||||||||    
T  29891630 ggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgtt 29891531  T
Q  439 ttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  29891530 ttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 343 - 516
Target Start/End: Complemental strand, 30251238 - 30251064
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgt-tttt 441  Q
    ||||| |||||||||||| |||||| ||||| || ||||||  ||||| |||  ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  30251238 ggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatttt 30251139  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    || ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||    
T  30251138 tgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 341 - 519
Target Start/End: Complemental strand, 31073690 - 31073512
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| |||||||||||||||||  |||||| || | |||| |||| |||||  | || |||||||||||||||||| |||| |||||||||||||||    
T  31073690 atggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgtttt 31073591  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  31073590 gtgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 31573720 - 31573901
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatctttttt-aaatcgaacaaaatcgtccttaaactatatgtttt- 440  Q
    ||||| |||| |||||||||||||||||||| || |||||| |||||| |||| || |||||| ||||||||||||||||| |||||||||||||||||     
T  31573720 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgttttt 31573819  T
Q  441 ---ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
       |||||||||||||| |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  31573820 tttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 343 - 510
Target Start/End: Complemental strand, 5121015 - 5120848
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |  ||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  5121015 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 5120916  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaacc 510  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  5120915 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 334 - 519
Target Start/End: Complemental strand, 31574280 - 31574095
Alignment:
Q  334 taaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat 433  Q
    |||||| | ||||| |||||||||||||||||  |||||| || |||||| |||| | |||  | || ||||||||||||||||||||||| ||||||||    
T  31574280 taaaaaaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat 31574181  T
Q  434 atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| || ||||||||||||||||||||||    
T  31574180 atgttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 416 - 519
Target Start/End: Complemental strand, 28636669 - 28636566
Alignment:
Q  416 aaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccaccta 515  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  28636669 aaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28636570  T
Q  516 tgct 519  Q
    ||||    
T  28636569 tgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 25468855 - 25469027
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt--ttgcag 446  Q
    |||||||||||||||||  |||||| || |||||| |||| |||||  |||| ||||||||||||||||||||||| |||||||||||||||  ||||||    
T  25468855 attacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttgcag 25468954  T
Q  447 ttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| |||||||||||||  || |||| ||| ||||||||||| |||||||| ||||||||||||||||    
T  25468955 ttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 29891080 - 29891256
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || |||| | |||| || ||  | || ||||||| ||||||||| ||||| |||||||||||||||||    
T  29891080 ggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgtttttt 29891179  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     || ||||| |  |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  29891180 acaattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 31073136 - 31073284
Alignment:
Q  336 aaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatc------gtccttaaa 429  Q
    |||| ||||||| |||||||||||||||||   ||||| || ||| |||||||||||||| ||||||||||||||||||||||||      |||||||||    
T  31073136 aaaaaatggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaa 31073235  T
Q  430 ctata-tgttttttgcagttttagtcttatctccctatttccaactcca 477  Q
    ||||| | |||||||||||||||||| ||||| ||||||||||||||||    
T  31073236 ctatattattttttgcagttttagtcatatcttcctatttccaactcca 31073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 28636351 - 28636435
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcaca 487  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28636351 ttttaaatcgaacaaaatcgttcctaaactatatgtttt-tgcagttttagtcatatctccctatttccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 35163733 - 35163557
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--tt 440  Q
    ||||| ||||||||||||||||   |||||| || | |||| ||||||||| |   || ||| ||||| ||||||||||||| |||||||||||||  ||    
T  35163733 ggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgtttttt 35163634  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgc 518  Q
    |||||||||||||| || || ||||||| |||||||| |||  || ||||||| ||||||||| || ||| |||||||    
T  35163633 ttgcagttttagtcctacct-cctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 519
Target Start/End: Original strand, 30250774 - 30250867
Alignment:
Q  426 taaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||||||| |||||||   ||||||||||||||||| || ||| ||||||||||| |||||||||||||| ||| ||||||    
T  30250774 taaactataagttttttgcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgct 30250867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 454
Target Start/End: Complemental strand, 32836543 - 32836431
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| ||||||||||| |||||  |||||| || | |||| ||||||||||    || ||| ||||||||||||| ||| |||||||| |||||||||    
T  32836543 tggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatgttttt 32836444  T
Q  442 tgcagttttagtc 454  Q
    |||||||||||||    
T  32836443 tgcagttttagtc 32836431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 512
Target Start/End: Original strand, 11523747 - 11523854
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgtttttt-gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    ||||| ||||||| ||||| |||||||| ||||||||| |||||||||||| || |||  ||||| |||||||||||| ||||| |||| |||||| |||    
T  11523747 aaatcaaacaaaaccgtccctaaactatcatgtttttttgcagttttagtcctacctca-tattttcaactccataaacgcacaaaaattgcagttctag 11523845  T
Q  504 tccaaccac 512  Q
    |||||||||    
T  11523846 tccaaccac 11523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 33095756 - 33095859
Alignment:
Q  385 gaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatg 483  Q
    ||||||||||  | || ||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| || || ||||||| || ||||| ||| |    
T  33095756 gaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttgcagttttagtcctacct-cctattttcacctccaaaaacg 33095854  T
Q  484 cacag 488  Q
    |||||    
T  33095855 cacag 33095859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 454
Target Start/End: Original strand, 35163190 - 35163295
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    ||||||||||| |||||  |||||| || | ||||  |||||||||   ||| ||| ||||||||||||| ||||| |||||||| ||||||||||||||    
T  35163190 attacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttgcagt 35163288  T
Q  448 tttagtc 454  Q
    |||||||    
T  35163289 tttagtc 35163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 489
Target Start/End: Complemental strand, 33096158 - 33096007
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatc----gtccttaaactat-atg 436  Q
    |||||| ||| |||||||| || |  |||||| || | |||||||||||||||   ||| ||| ||||||||||||| |    ||||||||||||| |||    
T  33096158 tggcttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcatg 33096059  T
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacaga 489  Q
    ||||||||| |||||||| || | |||||||| || ||||| ||| |||||||    
T  33096058 ttttttgcaattttagtccta-ccccctattttcacctccaaaaacgcacaga 33096007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 1e-64; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 34555922 - 34555750
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--ttttgcag 446  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  34555922 attacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcag 34555823  T
Q  447 ttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  34555822 ttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 21938569 - 21938739
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||| ||||||||| |  |||||| ||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21938569 attacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgttttttgcagtt 21938668  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  21938669 ttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 9992154 - 9992331
Alignment:
Q  343 ggcttcattacacttttggtcctaccatttta-acgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    ||||| |||||||||||||||||||||||||  || |||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  9992154 ggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttttt 9992253  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||| |||  |||||||||| |||||||||||| ||||||||||||    
T  9992254 tgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 9992702 - 9992525
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| || |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  9992702 tggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgttttt 9992603  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||| ||||||||||||| |||||||| ||| ||  ||||||| |||||||| |||||||| |||||||    
T  9992602 tgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 343 - 507
Target Start/End: Original strand, 37505067 - 37505232
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  37505067 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 37505166  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtcca 507  Q
    ||||||||||||| ||| ||||||||| |||||||| ||||| ||||||||| |||||||||||||    
T  37505167 tgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 44954771 - 44954596
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| |||||||||||||||||  |||||| || |||||||||||||| ||  | |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgttttttg 44954672  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||||    
T  44954671 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 50305325 - 50305152
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata---tgttttttgca 445  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   | |||||||||    
T  50305325 attacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttttgca 50305226  T
Q  446 gttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||||||||| ||||||||||||  |||| ||||| |||||||| |||||| || ||||||    
T  50305225 gttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgct 50305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 30786771 - 30786948
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaat-ggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    ||||| |||||||||||||| ||  |||||| || |||||| |||||| ||||| | || ||||||||||||||||||||||| ||||||||||||||||    
T  30786771 ggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 30786870  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||||    
T  30786871 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 52336056 - 52335880
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||| |||||||| ||| |||||| || ||||||||||| |||||| | || ||||||||||||||||||||||| |||||||||| ||||||    
T  52336056 ggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatttttttt 52335957  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||| ||||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 517
Target Start/End: Complemental strand, 10279094 - 10278922
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||| ||||||| |||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  10279094 tggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt- 10278996  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
      ||||||||||| ||||||| ||| |||||||||| |||  |||||||||| |||||||||||||||||| ||||    
T  10278995 --cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 1837505 - 1837681
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| |  |||||| |||| || ||  |||| |||||||||||||||||| |||| |||||||||||||||||    
T  1837505 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgtttttt 1837604  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  1837605 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 343 - 516
Target Start/End: Complemental strand, 16299227 - 16299055
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||| |||||| ||||||||||||| |  |||||  ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||    
T  16299227 ggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgtttttt 16299129  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctat 516  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||||||||| || ||||||| |||||||||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 44582599 - 44582427
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    |||||||||||||| |||||||||| |  |||||| ||||||||||  ||| |||| |||||||||||||||||| |||||||||||||| |||||||||    
T  44582599 attacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttgcagt 44582500  T
Q  448 tttagtcttatctccctatttccaactcc-ataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| ||||||||||| || |||| | ||| ||||||||||| |||||||||||||||||||||||||    
T  44582499 tttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 402 - 517
Target Start/End: Complemental strand, 8230128 - 8230013
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||| |||||||    
T  8230128 ttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtttt 8230029  T
Q  502 agtccaaccacctatg 517  Q
    ||||||||||||||||    
T  8230028 agtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 343 - 517
Target Start/End: Complemental strand, 2868254 - 2868080
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| || ||| || ||||||||||| | || ||||||||||||||||||||||| || ||||||||||||||    
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgtttttt 2868155  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||| || || |||||||||||||||||| ||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 44954232 - 44954402
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| |||| ||||  ||||||| || |||||| ||||||||||  | |||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  44954232 attacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgttttttgcagtt 44954331  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| |||||| || |||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||    
T  44954332 ttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 10278554 - 10278725
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgcagt 447  Q
    |||||||||||||||||  |||||| || |||||| |||| || ||| | || ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  10278554 attacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 10278653  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||| |||| |||||||| ||| ||||| ||||| || ||||||||||||||||||||||    
T  10278654 tttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 17641909 - 17641734
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-----atgttttttg 443  Q
    |||||||||||||||||  |||||| || |||||| ||||||||||  | || ||||||||||||||||||||||| ||||||||      | |||||||    
T  17641909 attacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttatttttttttg 17641810  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||    
T  17641809 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 44582063 - 44582233
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||| | |||| |||||| | || ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  44582063 attacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgttttttgcagtt 44582162  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| ||||||  | |||||||||||||||| ||||| ||||| || ||||||||||||||||||||||    
T  44582163 ttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 444038 - 443921
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || || ||||| |||||||    
T  444038 ttttaaatcgaacaaaatcgttcctaaactatatgttttttgcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagtttt 443939  T
Q  502 agtccaaccacctatgct 519  Q
    ||||||||||||||||||    
T  443938 agtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 23340182 - 23340359
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||| || |  |||||| || |||||| |||| |||||| |||| ||||||||||||||||||||  | |||||||||| |||||    
T  23340182 tggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatatattttt 23340281  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||||| |||||||||||||| ||| || |||||||| |||||||||| ||||||| ||||||    
T  23340282 tgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 37421166 - 37421338
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt--ttgcag 446  Q
    ||||||||||||||| |  |||||| || || ||| |||| |||||  | || ||||||||||||||||||||||| |||||||||||||||  ||||||    
T  37421166 attacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 37421265  T
Q  447 ttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| ||| |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||||||    
T  37421266 ttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 349 - 517
Target Start/End: Original strand, 4080027 - 4080195
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  ||| || || |||||| |||| || ||  | || ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  4080027 attacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgttttttacagtt 4080126  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||||| |||||||||||||||||||| | ||| ||||| ||||| ||||||||||||||||| |||||    
T  4080127 ttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 34555379 - 34555557
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||  |||| |||| | | || ||||||||||||||||||||||| |||||||||||||||||    
T  34555379 ggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 34555478  T
Q  443 g--cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
       ||||||||||| |||||||||||||||||||||| ||| |||||||||||  ||||||||| ||||||| ||||||    
T  34555479 ttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgct 34555557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 6224703 - 6224875
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgt--tttttgcag 446  Q
    |||||| ||||| ||||| |||||| || ||||||| |||||||| |    |||||||||||||||||||||||||||||| ||||| |  ||||| |||    
T  6224703 attacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatattttttacag 6224802  T
Q  447 ttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||| ||||||||||||||| ||| ||||| ||||| ||||||||||| |||||||||||||    
T  6224803 ttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 16298683 - 16298858
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| |||||| |||||| |||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||||||| ||||||||||||||||||    
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg 16298782  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| ||||| ||||||||||||||   ||| ||| | |||||  ||||||||||||||||||||||||    
T  16298783 cagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 29438930 - 29439107
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| ||||||| ||| |||||    
T  29438930 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttttt 29439029  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||| |||||| ||| || | |||  |||| ||||  |||||||||||||||||||||||||    
T  29439030 tgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 37505614 - 37505438
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||| | ||||||||||   ||||| || |||||| |||| || ||  |||| ||||||| | ||||||||||||| ||||||||||||||||    
T  37505614 tggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgttttt 37505515  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  37505514 -gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 349 - 509
Target Start/End: Original strand, 2867917 - 2868077
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| |||||||| |  |||||| || |||||| ||||||| ||  |||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  2867917 attacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatgttttttgcagtt 2868016  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaac 509  Q
    |||||| ||| ||||||| || ||||||| ||| ||||| ||||| |||||||||||||||    
T  2868017 ttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 385 - 517
Target Start/End: Original strand, 17641407 - 17641539
Alignment:
Q  385 gaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgc 484  Q
    ||||||||||  | ||||||||||||||||||||| || ||||||||||| |||||||| |||||||||  |||||||||||||||||||||| ||| ||    
T  17641407 gaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagttctatctccctatttccaactccagaaacgc 17641506  T
Q  485 acagaaatggcagttttagtccaaccacctatg 517  Q
    ||| ||||| |||||||||| ||||||||||||    
T  17641507 acataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 50926787 - 50926611
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||| |  |||||| || | |||| |||||||||||  ||| ||| ||||||||||||| ||||| ||||||||   ||||||    
T  50926787 ggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcattttttt 50926688  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |  | |||||||| ||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  50926687 gcagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgct 50926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 8229637 - 8229816
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-- 440  Q
    ||||| |||||||||||| ||||  |||||| |  |||||| ||||||| | | |  | |||||||||||| |||||||||  |||||||||||||||      
T  8229637 ggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgtttttt 8229736  T
Q  441 -ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
     |||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||| || ||||||    
T  8229737 tttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 8229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 353 - 483
Target Start/End: Complemental strand, 29439458 - 29439327
Alignment:
Q  353 cacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--ttttgcagtttt 450  Q
    |||||||||||| |||||||| |  |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||    
T  29439458 cacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagattt 29439359  T
Q  451 agtcttatctccctatttccaactccataaatg 483  Q
    |||| ||||| |||||||| ||||||| |||||    
T  29439358 agtcctatct-cctatttcaaactccagaaatg 29439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 415 - 516
Target Start/End: Original strand, 1744398 - 1744500
Alignment:
Q  415 aaaatcgtccttaaactatatgtttt-ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacc 513  Q
    |||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  1744398 aaaatcgtccctaaactatatatttttttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacc 1744497  T
Q  514 tat 516  Q
    |||    
T  1744498 tat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 447
Target Start/End: Complemental strand, 37421500 - 37421386
Alignment:
Q  334 taaaaagatggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatctttttt-aaatcgaacaaaatcgtccttaaacta 432  Q
    ||||| ||||| || ||||||||||| ||| ||||||||| || |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  37421500 taaaaggatggtttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaacta 37421401  T
Q  433 tatgttttttgcagt 447  Q
    |||| ||||||||||    
T  37421400 tatgatttttgcagt 37421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 503
Target Start/End: Original strand, 39485071 - 39485224
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || | |||| ||||||||||| | || ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  39485071 attacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagtt 39485170  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||| ||||| ||||||| ||||| || |||  || ||| ||| |||||||||    
T  39485171 ttagtcctatct-cctattttcaacttcagaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 503
Target Start/End: Original strand, 45048161 - 45048314
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||||||||||||||  |||||| || |||| | ||||||||| | | || |||||||| |||||||||||||| |||||||||||||||||||||||    
T  45048161 attacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgcagtt 45048260  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||| || || | ||||| |||||||| ||| ||| ||||||  |||||||||    
T  45048261 ttagtcctacct-catattttcaactccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 30787344 - 30787245
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| |||||||||||  |  |||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  30787344 ggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 29021411 - 29021234
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatat--gtttt 440  Q
    ||||| ||| |||||||||||||  |||||| || | |||| ||||||| ||    || ||| ||||||||||||||||||| |||| |||    |||||    
T  29021411 ggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggtttt 29021312  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||||||| | |||||||| |||||||| ||| ||||| ||||| ||||||| |||||||||||||||||    
T  29021311 ttgcagttttagtcttacc-ccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 406 - 519
Target Start/End: Complemental strand, 9833635 - 9833522
Alignment:
Q  406 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagt 504  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||| || | |||||||| |||||||| ||| ||||||||||  || |||||||    
T  9833635 aaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttagtcctacc-ccctattttcaactccagaaacgcacagaaataacatttttagt 9833537  T
Q  505 ccaaccacctatgct 519  Q
    || ||||||||||||    
T  9833536 cctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 437 - 519
Target Start/End: Original strand, 50304876 - 50304958
Alignment:
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||||| |||||||||||||| |||||||||||  |||| |||||||| ||||| ||||||||||||||||    
T  50304876 ttttttgcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 50926236 - 50926408
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactata--tgttttttgcag 446  Q
    |||||| |||||||||| ||||||| || | |||| ||||||  ||  | || ||| ||||||||||||||||||| ||||||||   | ||||||||||    
T  50926236 attacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttgcag 50926335  T
Q  447 ttttagtc-ttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| ||| |||| ||||| |||||||| |||  |||| |||||| ||||||||||||||||||||||||    
T  50926336 ttttagtccttacctcc-tattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 350 - 519
Target Start/End: Original strand, 23526665 - 23526833
Alignment:
Q  350 ttacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttt 449  Q
    ||||||||||||||||  |||||| || | |||| |||||||||||   || ||||||||||||||||||| ||| || |||||   |||||||||||||    
T  23526665 ttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcatttttttgcagttt 23526764  T
Q  450 tagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||    | |||||||| |||||||| ||| ||||||||||| ||| |||||| |||||| |||||||    
T  23526765 tagtccctgccccctattttcaactccaaaaacgcacagaaatgacag-tttagtacaaccatctatgct 23526833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 519
Target Start/End: Original strand, 29020917 - 29021056
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccat 478  Q
    ||||| |||||||||   ||| ||||||||||||||||||| |||||||| ||| |||||||||||| ||||||| ||| |||||||||| || |||||     
T  29020917 ctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttttttgcaattttagtgtta-ctccctattttcacctccaa 29021015  T
Q  479 aaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| ||||| ||||| |||||||||||| |||  |||||||    
T  29021016 aaacgcacataaatgtcagttttagtcctacccgctatgct 29021056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 437 - 519
Target Start/End: Complemental strand, 30787224 - 30787142
Alignment:
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||| || |||||||| ||| ||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  30787224 tttttttcaattttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgct 30787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 436
Target Start/End: Original strand, 50304445 - 50304532
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg 436  Q
    |||||||||||||||||  |||||| || |||||| ||||||||||  | || ||||||||||||||||||||||  |||||||||||    
T  50304445 attacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 503
Target Start/End: Complemental strand, 17088685 - 17088526
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| |  | |||| ||||||||||    || ||| ||||| ||||||| ||||| |||||||||| ||||||    
T  17088685 ggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatatttttt 17088586  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||||||||  || || ||||||| ||| || | ||| ||| ||||||| |||||||||    
T  17088585 gcagttttagttctacct-cctattttcaaatctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 499
Target Start/End: Complemental strand, 44291820 - 44291701
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccat 478  Q
    |||||||||||||||   ||| |||||||||||| |||||||||    |||||| ||||||||||||||||||||| || | |||||||| ||||||||     
T  44291820 ctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgttttttgcagttttagtccta-ccccctattttcaactccag 44291722  T
Q  479 aaatgcacagaaatggcagtt 499  Q
    |||  || |||||||||||||    
T  44291721 aaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 492
Target Start/End: Complemental strand, 45048675 - 45048533
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||||||||  |||||| || |  ||| ||||||||||  | || |||  |||||||||||| |||||| ||||||| ||||||||||||||    
T  45048675 attacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcct-aaactatcatgttttttgcagt 45048577  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaat 492  Q
    ||||||| || || ||||||| |||||||| ||| ||| ||||||    
T  45048576 tttagtcctacct-cctattttcaactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 23527039 - 23526936
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccata 479  Q
    |||||||||||||||    |||||||||||||||||||| ||||  ||||||||   ||||||||||||||||||    | |||||||| |||||||| |    
T  23527039 ctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcatttttttgcagttttagtccgtgccccctattttcaactccaaa 23526940  T
Q  480 aatg 483  Q
    ||||    
T  23526939 aatg 23526936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 44802717 - 44802606
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 441  Q
    ||||| |||||||||||||||||  |||||| || | |||| |||| |||||    || ||| |||  |||||||||||||| |||||||| ||||||||    
T  44802717 ggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttt 44802618  T
Q  442 tgcagttttagt 453  Q
    ||||||||||||    
T  44802617 tgcagttttagt 44802606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 519
Target Start/End: Original strand, 17088245 - 17088326
Alignment:
Q  437 ttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||| |||||||| || |||| ||||| ||||| || ||||||| ||||||||||||||||| || ||| ||||||||    
T  17088245 ttttttgcaattttagtcctacctcc-tattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 518
Target Start/End: Original strand, 44291311 - 44291477
Alignment:
Q  353 cacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atg--ttttttgcagttt 449  Q
    |||||||||||||  |||||| || | |||| |||||||||     || ||| |||| |||||||||||||| |||||||| |||  |||||||||||||    
T  44291311 cacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgttttttttgcagttt 44291410  T
Q  450 tagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgc 518  Q
    ||||| || || ||| ||| ||| |||| ||| ||||| |||| ||||||||||||  |||||||||||    
T  44291411 tagtcatacct-cctgttttcaaatccagaaacgcaca-aaatagcagttttagtcgtaccacctatgc 44291477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 25274766 - 25274863
Alignment:
Q  353 cacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtttt 450  Q
    |||||||||||||  |||||| || | |||| ||||||||||    || ||| ||||||||||||| ||| | ||||||| |||||||||||| ||||    
T  25274766 cacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaactacatgttttttgcattttt 25274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 18049596 - 18049767
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagt 447  Q
    ||||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18049596 attacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagt 18049695  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||||    
T  18049696 tttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 34799079 - 34799256
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 441  Q
    ||||| ||||||||||||||| ||||||||| || |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||    
T  34799079 ggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttttt 34799178  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||    
T  34799179 tgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 514
Target Start/End: Complemental strand, 15256377 - 15256203
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---t 439  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |    
T  15256377 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 15256278  T
Q  440 tttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacct 514  Q
    ||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  15256277 tttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 18428302 - 18428131
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18428302 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagt 18428203  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| |||||||    
T  18428202 tttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 600044 - 599867
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||| | ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  600044 ggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgtttttt 599945  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgcta 520  Q
    ||||||||||||||||||| |||||||||| |||| ||| ||| ||||||| |||||||||||||||||| |||||||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgcta 599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 16578642 - 16578466
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||||   |||||||| ||||||||||||||| || ||||||||||||||||||    
T  16578642 ggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgtttttt 16578543  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| |||||||||||||||||| | | ||| ||||||||||| |||||||||||||||||||||||||    
T  16578542 gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 343 - 475
Target Start/End: Original strand, 41260271 - 41260403
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41260271 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41260370  T
Q  443 gcagttttagtcttatctccctatttccaactc 475  Q
    |||||||||||||||||||||||||||||||||    
T  41260371 gcagttttagtcttatctccctatttccaactc 41260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 342 - 519
Target Start/End: Original strand, 9796725 - 9796902
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||||||||  |||||| || ||||||  ||| |||||| | || ||||||||||||||||||| ||| ||||||||||||||||    
T  9796725 tggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgttttt 9796824  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  9796825 tgcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 9797267 - 9797096
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcagt 447  Q
    ||||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  9797267 attacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgcagt 9797168  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||  ||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  9797167 tttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 28254431 - 28254602
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgcagt 447  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  28254431 attacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgcagt 28254530  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||||||| || ||||||||||||||||||||||    
T  28254531 tttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 28254971 - 28254796
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| ||||||||||  ||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttg 28254872  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  28254871 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 35427358 - 35427182
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| ||||||||| | | || ||||||| ||||||||||||||| |||| ||||| ||||||    
T  35427358 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatatttttt 35427259  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  35427258 gcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 343 - 505
Target Start/End: Original strand, 5730817 - 5730979
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| ||||||||||||||||||||||||| || |||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  5730817 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgtttttt 5730916  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtc 505  Q
    || ||||||||| || ||||||||||  ||||||| ||| | ||||||||| |||||||||||    
T  5730917 gctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 342 - 519
Target Start/End: Complemental strand, 7911163 - 7910986
Alignment:
Q  342 tggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 441  Q
    |||||| |||||||||||  ||||  |||||| || |||||| ||||||||| | | || ||||||||||||||||||||||| |||||||||| |||||    
T  7911163 tggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatattttt 7911064  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| |||| | |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  7911063 tgcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 42035773 - 42035948
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 443  Q
    |||| |||||||||||||||||  |||||| || |||||| ||||||||| | | || ||||||||||||||||||||||| |||||||||| | |||||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttg 42035872  T
Q  444 cagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || |||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||| ||||||    
T  42035873 caattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 483
Target Start/End: Original strand, 15255853 - 15255993
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||||||||||||||||    
T  15255853 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 15255952  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatg 483  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15255953 gcagttttagtcctatctccctatttccaactccataaatg 15255993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 34799629 - 34799453
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||||||||  |||||| || || | | |||| |||||| | || |||||||||||||||||| |||| |||||||||||||||||    
T  34799629 ggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttt 34799530  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||| |||||  ||||||||| ||||||||||||||    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 2208720 - 2208891
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatat-gttttttgcagt 447  Q
    |||||||||||| |||||||||||| || |||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||  |||||| || |    
T  2208720 attacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttacaat 2208819  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| ||||||||||||| ||| |||| ||| | ||||||||   ||||||||||||||||||||||||    
T  2208820 tttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 517
Target Start/End: Complemental strand, 35694418 - 35694242
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt------ 442  Q
    ||||||||||||||||| ||||||| || ||||||  |||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||          
T  35694418 attacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatatttttttttttttt 35694319  T
Q  443 --gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
      || |||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  35694318 ttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 515
Target Start/End: Original strand, 599532 - 599704
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||||||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||| ||| |||| ||||||||||||    
T  599532 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgtttttt 599631  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccaccta 515  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||| |||||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 368 - 519
Target Start/End: Complemental strand, 5731333 - 5731182
Alignment:
Q  368 cattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatt 467  Q
    |||||| || |||||| |||| |||| | | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  5731333 cattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgcagttttagttctatctccctatt 5731234  T
Q  468 tccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    | |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  5731233 ttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 18050131 - 18049961
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    |||||| ||||||||||  |||||| || |||||| |||| |||||  | || ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  18050131 attacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgctgtt 18050032  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||| || ||||||||||||| |||||||| ||| ||||||||||  |||||||| ||||||||||||||||    
T  18050031 ttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 41260748 - 41260631
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagtttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||    
T  41260748 ttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtttt 41260649  T
Q  502 agtccaaccacctatgct 519  Q
    ||||||||||| ||||||    
T  41260648 agtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 26252863 - 26252982
Alignment:
Q  397 atcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggca 496  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| || |||||||| ||    
T  26252863 atctcttttaaatcgaacaaaatcgtccctaaactatatgttttgtgcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgaca 26252962  T
Q  497 gttttagtccaaccacctat 516  Q
    | ||||||||||||||||||    
T  26252963 gatttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 16578108 - 16578285
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||| ||  |||||| || |||||| |||| |||||| | || ||||||||||||||||||||||| |||| ||||||||||||    
T  16578108 ggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 16578207  T
Q  443 gcagttttagtcttatctccctatttccaactccataaatgc-acagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||| ||| |||||||||||||||||||||| ||| || | | |||   ||||||||||||||||| |||||||    
T  16578208 gcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgct 16578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 6115657 - 6115481
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 441  Q
    ||||| |||| ||||||||||||   ||||| || |||||  |||| |||||| | || ||||||||||||||||||||||| ||||||||||||| |||    
T  6115657 ggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 6115558  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgc 518  Q
    || |||||||||  ||||||| ||||| |||||| | ||| ||||||||||| |||||||||||||||||| |||||    
T  6115557 tgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 415 - 519
Target Start/End: Original strand, 35426885 - 35426989
Alignment:
Q  415 aaaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacct 514  Q
    ||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |    
T  35426885 aaaatggtccttaaactatatgttttttgcaattttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacat 35426984  T
Q  515 atgct 519  Q
    |||||    
T  35426985 atgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 516
Target Start/End: Complemental strand, 42036259 - 42036144
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttt 500  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||   | |||||||||||||| ||||||||| ||||| ||||||    
T  42036259 ttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttt 42036160  T
Q  501 tagtccaaccacctat 516  Q
    ||||||||||||||||    
T  42036159 tagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 35693869 - 35694046
Alignment:
Q  344 gcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgt--tttt 441  Q
    |||| |||||||||||| ||||  |||||| || || | | ||||||| | | | || |||||||||||| |||||||||| |||||||||| |  ||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    | ||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||| ||||    
T  35693969 ttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 7910616 - 7910791
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||| ||||||||||  |||||| |  |||||| |||||||||   | || ||||||||||||||||||||||| |||| ||||||||||||    
T  7910616 ggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 7910715  T
Q  443 gcagttttagtc--ttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatg 517  Q
    |||| |||||||   ||||||  |||||| ||||| | ||||||||||||||| ||||||||||| |||||| ||||    
T  7910716 gcag-tttagtcctatatctctttatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccacatatg 7910791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 18674207 - 18674256
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtttta 451  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18674207 ttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 35163815 - 35163874
Alignment:
Q  460 tccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 503
Target Start/End: Original strand, 18805170 - 18805322
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcagtt 448  Q
    ||||||||||||||||   |||||| || | |||| ||||||||| |  ||| |||||||||||||||||  ||||   ||||||||||||||| | |||    
T  18805170 attacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatgttttttcctgtt 18805268  T
Q  449 ttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttag 503  Q
    |||||| || || ||||| | |||||||| |||  || ||||||| |||||||||    
T  18805269 ttagtcctacct-cctatcttcaactccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 454
Target Start/End: Complemental strand, 28877429 - 28877324
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    |||||||||||||||||  |||||| || |||||| |||||||||   | || ||| |||| ||||||||| |||| | |||||| ||||||||||| ||    
T  28877429 attacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttttttgctgt 28877331  T
Q  448 tttagtc 454  Q
    |||||||    
T  28877330 tttagtc 28877324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 395
Target Start/End: Original strand, 35426848 - 35426894
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtcc 395  Q
    ||||||||||| ||||||||||||| || |||||| |||||||||||    
T  35426848 attacacttttagtcctaccattttgaccaactcacgaaaatggtcc 35426894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 115; Significance: 4e-58; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 341 - 519
Target Start/End: Original strand, 6390 - 6568
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| ||| ||||||||||||||||||||| |  |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  6390 atggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttt 6489  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| ||||| ||||||||||||| || ||| ||||||||||| |||||||| ||||||||| ||||||    
T  6490 ttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

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Target: scaffold0712; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 6883 - 6761
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagttttagtctta----tctccctatttccaactccataaatgcacagaaatggca 496  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||||||||||| ||    ||||||||||| |||||||| ||| ||||||||||| ||    
T  6883 ttttaaatcgaacaaaatcgtacctaaactacatgtttttttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgaca 6784  T
Q  497 gttttagtccaaccacctatgct 519  Q
    |||||||||||||||| ||||||    
T  6783 gttttagtccaaccacatatgct 6761  T

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Target: scaffold0709 (Bit Score: 115; Significance: 4e-58; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 341 - 519
Target Start/End: Original strand, 6408 - 6586
Alignment:
Q  341 atggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 440  Q
    ||||||| ||| ||||||||||||||||||||| |  |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  6408 atggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttt 6507  T
Q  441 ttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||||||||||||| ||||| ||||||||||||| || ||| ||||||||||| |||||||| ||||||||| ||||||    
T  6508 ttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 6901 - 6779
Alignment:
Q  402 ttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcagttttagtctta----tctccctatttccaactccataaatgcacagaaatggca 496  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||||||||||| ||    ||||||||||| |||||||| ||| ||||||||||| ||    
T  6901 ttttaaatcgaacaaaatcgtacctaaactacatgtttttttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgaca 6802  T
Q  497 gttttagtccaaccacctatgct 519  Q
    |||||||||||||||| ||||||    
T  6801 gttttagtccaaccacatatgct 6779  T

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Target: scaffold0097 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 343 - 519
Target Start/End: Original strand, 46266 - 46443
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-t 441  Q
    ||||| ||| |||||||||||||  |||||| || |||| | ||||||||| | | || ||||||||||||||||||| ||| ||||||||||||||| |    
T  46266 ggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 46365  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  46366 tgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

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Target: scaffold0097; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 343 - 519
Target Start/End: Complemental strand, 46814 - 46637
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 441  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||||||||| || | |||||||||||||||||||||| |||||||||||||| |||    
T  46814 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgtttttt 46715  T
Q  442 tgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    || |||||||||  |||| ||||||||||||||||| ||| ||||| ||||| || |||| |||||||||||||||||    
T  46714 tgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

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Target: scaffold0025 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 421 - 519
Target Start/End: Original strand, 78395 - 78493
Alignment:
Q  421 gtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  78395 gtccctaaactatatgttttttgcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

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Target: scaffold0007 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 205907 - 205738
Alignment:
Q  349 attacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagt 447  Q
    ||||||||||| |||||  |||||| || |||||| |||||||||||   || ||| ||||||||||||| ||||| |||||||| ||| ||||||||||    
T  205907 attacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg-tttttgcagt 205809  T
Q  448 tttagtcttatctccctatttccaactccataaatgcacagaaatggcagttttagtccaaccacctatgct 519  Q
    ||||||| || |  ||||||| |||||||| ||| ||| ||||||||||||||||| || ||| ||||||||    
T  205808 tttagtccta-cgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

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Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 433
Target Start/End: Complemental strand, 210883 - 210793
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat 433  Q
    ||||| |||||||||||||||||  |||||| || ||||||||||||||||||   || ||| ||||||||||||| ||||| ||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

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Target: scaffold1432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 450
Target Start/End: Complemental strand, 611 - 504
Alignment:
Q  343 ggcttcattacacttttggtcctaccattttaacgaactcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 442  Q
    ||||| |||||||||||| ||||  |||||| |||| |||| ||||||||||    || ||| |||||||||||||  |||  |||||||||||||||||    
T  611 ggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatgtttttt 512  T
Q  443 gcagtttt 450  Q
    ||||||||    
T  511 gcagtttt 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 159390 - 159282
Alignment:
Q  380 ctcatgaaaatggtccaatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccat 478  Q
    |||| ||||||||||   ||| ||| ||||||||||||||||| | |||||||| || |||||||||||||||||| || | |||||||| || |||||     
T  159390 ctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttttgcagttttagtcata-ccccctattttcacctccaa 159292  T
Q  479 aaatgcacag 488  Q
    ||| ||||||    
T  159291 aaacgcacag 159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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