View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16955_low_3 (Length: 438)

Name: NF16955_low_3
Description: NF16955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16955_low_3
NF16955_low_3
[»] chr8 (42 HSPs)
chr8 (12-101)||(44346217-44346306)
chr8 (12-96)||(31980047-31980131)
chr8 (12-99)||(29256911-29256998)
chr8 (12-103)||(43185444-43185535)
chr8 (12-97)||(14702-14787)
chr8 (12-96)||(31976666-31976750)
chr8 (12-99)||(29482339-29482426)
chr8 (12-97)||(33376829-33376914)
chr8 (12-97)||(33986461-33986546)
chr8 (12-91)||(40733641-40733720)
chr8 (12-96)||(10593537-10593620)
chr8 (12-100)||(29611787-29611875)
chr8 (12-99)||(35978590-35978677)
chr8 (15-97)||(1087846-1087928)
chr8 (12-95)||(26519984-26520067)
chr8 (12-99)||(34009153-34009240)
chr8 (20-101)||(9983120-9983201)
chr8 (12-101)||(24051736-24051825)
chr8 (15-95)||(13145051-13145131)
chr8 (12-100)||(44890062-44890150)
chr8 (12-95)||(24045428-24045511)
chr8 (20-99)||(28324221-28324300)
chr8 (12-97)||(36624810-36624895)
chr8 (15-93)||(31976122-31976200)
chr8 (37-95)||(36103250-36103308)
chr8 (22-95)||(8049651-8049724)
chr8 (17-97)||(28190231-28190311)
chr8 (37-97)||(30444806-30444866)
chr8 (39-97)||(23011885-23011944)
chr8 (12-103)||(43168123-43168214)
chr8 (44-97)||(7669132-7669185)
chr8 (18-95)||(10605991-10606068)
chr8 (34-82)||(8469885-8469933)
chr8 (39-84)||(7079780-7079825)
chr8 (39-96)||(26520509-26520565)
chr8 (21-103)||(6460490-6460572)
chr8 (25-95)||(15719406-15719476)
chr8 (15-95)||(34390418-34390489)
chr8 (15-68)||(8409253-8409306)
chr8 (58-97)||(13823458-13823497)
chr8 (56-97)||(6421788-6421829)
chr8 (28-97)||(14013269-14013338)
[»] chr3 (46 HSPs)
chr3 (12-106)||(36397502-36397596)
chr3 (12-101)||(53469947-53470036)
chr3 (12-97)||(34089040-34089125)
chr3 (12-100)||(24241708-24241796)
chr3 (12-100)||(48948046-48948134)
chr3 (12-97)||(43863486-43863571)
chr3 (12-95)||(28181800-28181883)
chr3 (12-97)||(671188-671273)
chr3 (12-97)||(7977015-7977100)
chr3 (12-97)||(35279470-35279555)
chr3 (15-97)||(21731386-21731468)
chr3 (12-94)||(48824637-48824719)
chr3 (12-101)||(37054860-37054949)
chr3 (20-98)||(50168190-50168268)
chr3 (15-97)||(52527477-52527559)
chr3 (20-97)||(2105202-2105279)
chr3 (12-97)||(21307111-21307196)
chr3 (20-93)||(34396148-34396221)
chr3 (12-97)||(42005473-42005558)
chr3 (12-101)||(28092128-28092216)
chr3 (12-104)||(645728-645820)
chr3 (22-106)||(38506475-38506559)
chr3 (12-100)||(47767890-47767978)
chr3 (37-99)||(19475966-19476028)
chr3 (20-101)||(30767025-30767106)
chr3 (37-99)||(8762276-8762338)
chr3 (12-98)||(26547442-26547527)
chr3 (12-97)||(7302857-7302942)
chr3 (20-93)||(13176195-13176268)
chr3 (12-89)||(53129434-53129511)
chr3 (37-97)||(33871764-33871824)
chr3 (12-88)||(36636291-36636367)
chr3 (37-97)||(47714426-47714486)
chr3 (20-99)||(31188918-31188996)
chr3 (20-70)||(13339118-13339168)
chr3 (12-62)||(46707089-46707139)
chr3 (12-67)||(6836590-6836645)
chr3 (20-99)||(44288022-44288101)
chr3 (20-78)||(2733026-2733084)
chr3 (12-100)||(47283791-47283885)
chr3 (37-106)||(54761417-54761486)
chr3 (20-92)||(55460738-55460810)
chr3 (20-75)||(46636321-46636376)
chr3 (14-68)||(44329513-44329566)
chr3 (19-91)||(34936450-34936522)
chr3 (12-94)||(47000192-47000270)
[»] chr1 (42 HSPs)
chr1 (12-106)||(15467477-15467571)
chr1 (12-97)||(946844-946929)
chr1 (12-97)||(28632126-28632211)
chr1 (12-100)||(21267343-21267431)
chr1 (22-99)||(220627-220704)
chr1 (12-100)||(6470225-6470314)
chr1 (12-84)||(32647757-32647829)
chr1 (15-97)||(37447426-37447508)
chr1 (12-97)||(37036504-37036589)
chr1 (12-100)||(35499513-35499601)
chr1 (12-100)||(48954009-48954097)
chr1 (12-84)||(50472180-50472252)
chr1 (12-103)||(39887530-39887621)
chr1 (12-97)||(31166675-31166761)
chr1 (15-100)||(32128551-32128636)
chr1 (12-97)||(37446883-37446968)
chr1 (12-92)||(41822078-41822158)
chr1 (15-95)||(44571658-44571738)
chr1 (12-99)||(8225237-8225324)
chr1 (37-97)||(47541851-47541911)
chr1 (22-100)||(10166969-10167047)
chr1 (12-94)||(44571142-44571224)
chr1 (15-95)||(23955981-23956061)
chr1 (30-97)||(37447971-37448038)
chr1 (39-97)||(12293022-12293080)
chr1 (39-100)||(24273081-24273142)
chr1 (12-99)||(4663775-4663861)
chr1 (12-99)||(41480952-41481039)
chr1 (49-99)||(31196903-31196953)
chr1 (12-53)||(41577841-41577882)
chr1 (20-97)||(41822752-41822829)
chr1 (12-93)||(32202216-32202297)
chr1 (36-92)||(13182107-13182163)
chr1 (37-92)||(26500947-26501002)
chr1 (37-100)||(47165072-47165135)
chr1 (38-93)||(45358975-45359030)
chr1 (39-97)||(23969439-23969497)
chr1 (12-58)||(31195977-31196023)
chr1 (20-66)||(34003858-34003904)
chr1 (62-99)||(32288012-32288049)
chr1 (12-89)||(52134877-52134953)
chr1 (15-59)||(14406086-14406130)
[»] chr7 (40 HSPs)
chr7 (12-97)||(39342160-39342245)
chr7 (12-99)||(23548117-23548204)
chr7 (12-99)||(28538675-28538762)
chr7 (12-99)||(36328326-36328413)
chr7 (12-97)||(2411776-2411861)
chr7 (12-99)||(42816987-42817074)
chr7 (12-99)||(45984798-45984885)
chr7 (12-99)||(45989158-45989245)
chr7 (12-97)||(14602771-14602856)
chr7 (12-99)||(35456269-35456356)
chr7 (12-97)||(40496183-40496268)
chr7 (12-99)||(43791486-43791573)
chr7 (12-99)||(26416385-26416471)
chr7 (15-93)||(30080312-30080390)
chr7 (12-91)||(30587436-30587515)
chr7 (20-99)||(41442601-41442680)
chr7 (20-97)||(40495672-40495749)
chr7 (34-101)||(14790554-14790621)
chr7 (18-100)||(32650994-32651076)
chr7 (23-101)||(45181753-45181830)
chr7 (15-95)||(9784455-9784536)
chr7 (12-95)||(13814504-13814587)
chr7 (20-95)||(38320751-38320825)
chr7 (39-100)||(26161984-26162045)
chr7 (23-99)||(35488688-35488763)
chr7 (26-101)||(37460466-37460541)
chr7 (12-90)||(30629524-30629602)
chr7 (39-100)||(3905247-3905307)
chr7 (12-97)||(46699747-46699832)
chr7 (15-67)||(18926202-18926254)
chr7 (37-100)||(6498611-6498674)
chr7 (61-100)||(40667834-40667873)
chr7 (20-97)||(25188794-25188871)
chr7 (37-97)||(29639063-29639124)
chr7 (20-77)||(45967521-45967578)
chr7 (40-99)||(1580381-1580441)
chr7 (20-99)||(5976117-5976195)
chr7 (12-50)||(19865604-19865642)
chr7 (20-50)||(46700637-46700667)
chr7 (20-88)||(22391126-22391194)
[»] chr4 (38 HSPs)
chr4 (12-101)||(35470587-35470676)
chr4 (12-100)||(2126301-2126389)
chr4 (12-100)||(42775777-42775865)
chr4 (12-99)||(40547766-40547853)
chr4 (12-100)||(47108683-47108771)
chr4 (12-97)||(28751744-28751829)
chr4 (12-97)||(46242622-46242707)
chr4 (12-100)||(26534951-26535038)
chr4 (12-99)||(21782436-21782523)
chr4 (12-99)||(30303583-30303670)
chr4 (12-97)||(41139935-41140020)
chr4 (12-94)||(42776548-42776630)
chr4 (15-96)||(56118170-56118251)
chr4 (12-96)||(27284221-27284305)
chr4 (25-99)||(16516644-16516718)
chr4 (12-96)||(13318216-13318299)
chr4 (12-97)||(24705793-24705878)
chr4 (12-97)||(54566637-54566722)
chr4 (13-95)||(46242169-46242250)
chr4 (37-97)||(10633181-10633241)
chr4 (13-93)||(16299781-16299861)
chr4 (37-100)||(31473999-31474062)
chr4 (20-95)||(31948044-31948119)
chr4 (12-101)||(5579647-5579736)
chr4 (20-99)||(19461264-19461343)
chr4 (37-97)||(21012439-21012499)
chr4 (30-100)||(29091606-29091676)
chr4 (7-67)||(17727504-17727564)
chr4 (14-97)||(9449412-9449495)
chr4 (20-97)||(17727882-17727960)
chr4 (41-102)||(3803718-3803779)
chr4 (49-98)||(41983368-41983417)
chr4 (20-85)||(52294609-52294674)
chr4 (44-99)||(53760322-53760377)
chr4 (30-79)||(56339549-56339598)
chr4 (12-64)||(4490483-4490535)
chr4 (20-100)||(5716110-5716190)
chr4 (64-97)||(43955048-43955081)
[»] chr2 (43 HSPs)
chr2 (12-97)||(769496-769581)
chr2 (12-117)||(1583312-1583417)
chr2 (12-97)||(33188789-33188874)
chr2 (12-97)||(7309436-7309521)
chr2 (12-97)||(44256098-44256183)
chr2 (12-100)||(35047198-35047286)
chr2 (15-97)||(3092713-3092795)
chr2 (12-97)||(19231017-19231101)
chr2 (12-97)||(39630690-39630775)
chr2 (12-99)||(8735963-8736050)
chr2 (12-100)||(13018209-13018297)
chr2 (12-100)||(32839185-32839273)
chr2 (12-95)||(11141769-11141852)
chr2 (12-99)||(14306362-14306449)
chr2 (12-97)||(41585194-41585279)
chr2 (16-100)||(21504918-21505002)
chr2 (22-97)||(2925125-2925200)
chr2 (22-99)||(28021704-28021781)
chr2 (22-102)||(19072305-19072385)
chr2 (12-97)||(17906106-17906191)
chr2 (12-100)||(7167185-7167273)
chr2 (12-95)||(7611421-7611504)
chr2 (12-71)||(11595269-11595328)
chr2 (12-71)||(11607171-11607230)
chr2 (12-97)||(30698745-30698830)
chr2 (20-97)||(31703923-31704000)
chr2 (20-99)||(31941428-31941507)
chr2 (15-98)||(32839714-32839797)
chr2 (12-94)||(19193746-19193828)
chr2 (12-97)||(44205193-44205278)
chr2 (20-76)||(30265803-30265859)
chr2 (39-100)||(6749566-6749627)
chr2 (37-97)||(10480269-10480329)
chr2 (37-101)||(11794045-11794109)
chr2 (20-95)||(2274312-2274386)
chr2 (37-97)||(7684594-7684654)
chr2 (37-93)||(11532118-11532174)
chr2 (14-92)||(29278591-29278669)
chr2 (42-91)||(6996371-6996420)
chr2 (37-99)||(8736501-8736563)
chr2 (56-106)||(45094000-45094050)
chr2 (20-99)||(11799265-11799343)
chr2 (49-101)||(31220873-31220922)
[»] chr6 (17 HSPs)
chr6 (12-97)||(8475593-8475678)
chr6 (12-99)||(1368940-1369027)
chr6 (12-97)||(15615920-15616005)
chr6 (22-98)||(10105480-10105556)
chr6 (15-97)||(1195771-1195853)
chr6 (12-97)||(6357825-6357910)
chr6 (37-103)||(34244837-34244903)
chr6 (12-97)||(724811-724896)
chr6 (12-97)||(28918621-28918706)
chr6 (25-100)||(31413337-31413412)
chr6 (12-95)||(15833071-15833154)
chr6 (37-99)||(13487425-13487487)
chr6 (37-97)||(34364894-34364954)
chr6 (34-97)||(9697874-9697937)
chr6 (39-99)||(29889294-29889355)
chr6 (27-95)||(26855480-26855548)
chr6 (20-93)||(26901343-26901416)
[»] chr5 (38 HSPs)
chr5 (12-101)||(22304647-22304736)
chr5 (12-97)||(41761744-41761829)
chr5 (15-101)||(17541880-17541966)
chr5 (12-100)||(12480364-12480452)
chr5 (12-97)||(927765-927850)
chr5 (15-97)||(32249649-32249731)
chr5 (12-97)||(22304734-22304819)
chr5 (12-98)||(6771822-6771908)
chr5 (12-99)||(33146545-33146632)
chr5 (12-100)||(22303385-22303473)
chr5 (12-96)||(37091051-37091135)
chr5 (12-95)||(28489926-28490009)
chr5 (12-97)||(1209130-1209213)
chr5 (12-97)||(28490370-28490456)
chr5 (34-98)||(13390961-13391025)
chr5 (12-99)||(15579996-15580084)
chr5 (22-106)||(33995435-33995519)
chr5 (12-95)||(10315113-10315196)
chr5 (12-93)||(15270421-15270502)
chr5 (39-100)||(35111702-35111763)
chr5 (25-97)||(8255434-8255506)
chr5 (39-97)||(25935151-25935209)
chr5 (22-95)||(14835265-14835338)
chr5 (20-93)||(37241163-37241236)
chr5 (24-89)||(38178813-38178878)
chr5 (24-89)||(38206037-38206102)
chr5 (37-97)||(12064318-12064378)
chr5 (37-100)||(20320526-20320589)
chr5 (34-97)||(40089412-40089475)
chr5 (12-98)||(8264910-8264996)
chr5 (37-95)||(19533769-19533827)
chr5 (20-91)||(31316595-31316666)
chr5 (12-91)||(31368316-31368395)
chr5 (12-69)||(30519419-30519475)
chr5 (12-69)||(30559759-30559815)
chr5 (37-100)||(37722751-37722814)
chr5 (19-97)||(32317145-32317222)
chr5 (46-99)||(6955020-6955073)
[»] scaffold0301 (1 HSPs)
scaffold0301 (12-84)||(7616-7688)
[»] scaffold0318 (1 HSPs)
scaffold0318 (12-98)||(3321-3407)
[»] scaffold0169 (1 HSPs)
scaffold0169 (12-97)||(4483-4568)
[»] scaffold0417 (1 HSPs)
scaffold0417 (12-94)||(11499-11581)
[»] scaffold0129 (1 HSPs)
scaffold0129 (12-71)||(19333-19392)
[»] scaffold0337 (2 HSPs)
scaffold0337 (12-75)||(15959-16022)
scaffold0337 (12-83)||(15500-15571)
[»] scaffold0065 (2 HSPs)
scaffold0065 (12-83)||(2542-2613)
scaffold0065 (20-75)||(3001-3056)
[»] scaffold0047 (1 HSPs)
scaffold0047 (12-95)||(49838-49921)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-93)||(130720-130793)
[»] scaffold0400 (1 HSPs)
scaffold0400 (12-99)||(4018-4105)
[»] scaffold0365 (1 HSPs)
scaffold0365 (12-99)||(4662-4749)
[»] scaffold0027 (1 HSPs)
scaffold0027 (37-96)||(11319-11378)


Alignment Details
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 44346306 - 44346217
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44346306 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 44346217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 31980131 - 31980047
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31980131 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 29256998 - 29256911
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29256998 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactctta 29256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 43185444 - 43185535
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43185444 atgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaagaat 43185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 14702 - 14787
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14702 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatttcctcatccaaacacactct 14787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 31976750 - 31976666
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31976750 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 29482426 - 29482339
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29482426 atgaaagtaatttaattgaatcatttaaatttcctataattctaaattctttaaaatttctcaattacctcatccaaacacactctta 29482339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 33376914 - 33376829
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33376914 atgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttatcaattacctcatccaaacacactct 33376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 33986461 - 33986546
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  33986461 atgaaagtaatttaattgaatcatttaaattgcctagaattccgaattctttaaaatttctcaattacctcatccaaacacactct 33986546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 40733720 - 40733641
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40733720 atgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 10593537 - 10593620
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10593537 atgaaagtaatttaattgaatcatttaaattgcctagaattttaaatt-tttaaaatttctcaattacctcatccaaacacactc 10593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 29611787 - 29611875
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  29611787 atgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccacatccaaacacactcttag 29611875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 35978677 - 35978590
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  35978677 atgaaaggaatttaattgaatcatttaaattgactagaattttaaattctttaaaatttctcaattgcctcatccaaacacactctta 35978590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 1087928 - 1087846
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1087928 aaagtaatttaattgaatcatttaaatttcctaaaattctaaattctttaaaatttctcaattacctcattcaaacatactct 1087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 26520067 - 26519984
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||    
T  26520067 atgaaagtagtttaattgaatcatttaaattgcctagaattttaaattctttaaaatttatcaattactttatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 34009153 - 34009240
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||| |||||||||| ||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34009153 atgaaagtaacttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 34009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 9983120 - 9983201
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    |||| ||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9983120 aattcaattgaatcatttgaattgattagaattctaaattcttcaaaatttctcaattacctcatccaaacacactcttaga 9983201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 24051736 - 24051825
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||    
T  24051736 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactcttaga 24051825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13145051 - 13145131
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||    
T  13145051 aaaggaatttaattaaatcatttaaattgcctagaattttaaattctttaaattttcccaattacctcacccaaacacact 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 44890062 - 44890150
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| ||||||||| ||| |||| |||| |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  44890062 atgaaagcaatttaatttaataatttgaattacctagaattctaaatttttcaaaatttctcaattaccttatccaaacacactcttag 44890150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 24045428 - 24045511
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||    
T  24045428 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacact 24045511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28324300 - 28324221
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||    
T  28324300 aatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactctta 28324221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 36624895 - 36624810
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||| ||||||||||||| |||| | ||||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  36624895 atgaaagcaattgaattgaatcatttgaattccttagaattctaaattcttcaaaatttctcaattatcccatctaaacacactct 36624810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 31976200 - 31976122
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||| |   ||| ||||||||||||||||||||||    
T  31976200 aaagcaatttaattgaatcatttgaattacctagaattctaaattcttaattttttttcaattacctcatccaaacaca 31976122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 36103250 - 36103308
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  36103250 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 8049651 - 8049724
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||| |||| | ||||| ||||||||||||||||  | ||||||||||||||||||||||||    
T  8049651 tttaattgaatcatttgaattacatagaactctaaattctttaaaaaatttcaattacctcatccaaacacact 8049724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 28190311 - 28190231
Alignment:
Q  17 agtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||   ||||| ||||| |||| |||||||    
T  28190311 agtaatttaattgaatcatttaaattgcgtagaattctaagttctttcaaattttcgaattatctcattcaaatacactct 28190231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 30444866 - 30444806
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  30444866 taaattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactct 30444806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 23011885 - 23011944
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatcc-aaacacactct 97  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23011885 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaaacacactct 23011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 43168123 - 43168214
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 103  Q
    |||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||    ||||||  |||||||||||||| ||| |||||    
T  43168123 atgaaaataatttaattaaattatttaaattgtctagaattctaaattctttaaaaaaattcaattgactcatccaaacacattctaagaat 43168214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 7669132 - 7669185
Alignment:
Q  44 cctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7669132 cctagagttctaaattctttgaaatttctcaattaccccatccaaacacactct 7669185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10605991 - 10606068
Alignment:
Q  18 gtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||| ||||    | ||||||||||||||||||||||    
T  10605991 gtaatttaattgaatcatttgaattgactaaaattctaaattcttcaaaaaaaattaattacctcatccaaacacact 10606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8469885 - 8469933
Alignment:
Q  34 atttaaattgcctagaattctaaattctttaaaatttctcaattacctc 82  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  8469885 atttgaattacctagaattctaaattctttaaaatttctcaattacctc 8469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 7079780 - 7079825
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcat 84  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||    
T  7079780 aattacctagaattttaaattctttaaaatttctcaattacctcat 7079825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 26520565 - 26520509
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  26520565 aattccctagaattctaaat-cttcaaaatttctcaattaccccatccaaacacactc 26520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 6460572 - 6460490
Alignment:
Q  21 atttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 103  Q
    |||| |||||||||||| |||| |||| |||| |||||||| | |||||| | ||||  |||||| |||||||||||||||||    
T  6460572 atttgattgaatcatttgaatttcctaaaattttaaattctattaaattttttaattgtctcatcaaaacacactcttagaat 6460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 15719406 - 15719476
Alignment:
Q  25 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||  ||| ||||||||| |||| |||||| |||||||||||||||||||||  | ||||||||||    
T  15719406 aattgaatagtttgaattgcctaaaattttaaattttttaaaatttctcaattaccttgttcaaacacact 15719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 34390418 - 34390489
Alignment:
Q  15 aaagtaatttaattgaatca-tttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||||||| |||||||| |||||||||||          |||||||||||||||||||||||||||||||    
T  34390418 aaagtaatttaattgaatcattttaaatttcctagaattct----------aaatttctcaattacctcatccaaacacact 34390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 8409306 - 8409253
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaat 68  Q
    |||| ||||||||| ||||||||| |||| |||||||||||| |||||||||||    
T  8409306 aaagcaatttaattaaatcatttagattgtctagaattctaatttctttaaaat 8409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 13823458 - 13823497
Alignment:
Q  58 ttctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  13823458 ttcttcaaaatttctcaattacttcatccaaacacactct 13823497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 6421788 - 6421829
Alignment:
Q  56 aattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||| ||||||||||| ||||| |||||    
T  6421788 aattctttaaaatttctcgattacctcatctaaacaaactct 6421829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 14013338 - 14013269
Alignment:
Q  28 tgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| |||| ||||||||||||||||||||| | |||||||   ||||| ||| |||||| |||||||    
T  14013338 tgaatcttttatattgcctagaattctaaattcatcaaaattttctaattaactcgtccaaatacactct 14013269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 36397596 - 36397502
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36397596 atgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaggatatt 36397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 53470036 - 53469947
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53470036 atgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 53469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 34089040 - 34089125
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34089040 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactct 34089125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 24241796 - 24241708
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24241796 atgaaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 24241708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 48948046 - 48948134
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  48948046 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacatactcttag 48948134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 43863571 - 43863486
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43863571 atgaaaataatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactct 43863486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 28181883 - 28181800
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  28181883 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacctcgtccaaacacact 28181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 671273 - 671188
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||    
T  671273 atgaaagtaatttaattgaatcatttaaattgtctataattttatattctttaaaatttctcaattacctcatccaaacacactct 671188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 7977015 - 7977100
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  7977015 atgaaagtaattgaattgaatcatttaaattgcctaggattcgaaattctttaaaatttcccaattacctcatccaaacacactct 7977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 35279555 - 35279470
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  35279555 atgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttcccaattgcctcatccaaacacactct 35279470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 21731386 - 21731468
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||    
T  21731386 aaagtaatttaattgaattatttaaattgcctagaattttaaattctcttaaatttatcaattacctcatccaaacacactct 21731468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 48824719 - 48824637
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  48824719 atgaaaataatttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccttatccaaacacac 48824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 37054860 - 37054949
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||    
T  37054860 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactcttaga 37054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 50168268 - 50168190
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    ||||||||||||  |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  50168268 aatttaattgaagtatttaaattgccaagaattctcgattctttaaaatttctcaattacctcatccaaacacactctt 50168190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 52527477 - 52527559
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  52527477 aaagtaatttaattgaatcatttaaattttttagaattctaaattttttaaaattttccaattacctcatccaaacacactct 52527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 2105202 - 2105279
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||    
T  2105202 aatttaattgaatcatttaaattacctagaattataaattcttcaaaatttctcaattactccatccaaacacactct 2105279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 21307196 - 21307111
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| | |||||||||||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21307196 atgaaagcattttaattgaatcatttcaattatctaaaattctaaattctttaaaatttcccaattacctcatccaaacacactct 21307111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 34396221 - 34396148
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  34396221 aatttaattgaatcatttaaattgcctagaattttaaactctttaaaattttccaattacctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 42005558 - 42005473
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||    
T  42005558 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 42005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 28092128 - 28092216
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||  ||||||||    
T  28092128 atgaaagaaatttaattgaatcatataaattgcctagaatt-taaattctttaaaattttccaattagctcatccaaacattctcttaga 28092216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 645820 - 645728
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaata 104  Q
    |||||| ||||||||| ||||||||| |||| | | |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||    
T  645820 atgaaaataatttaatcgaatcatttgaattacttggaattctaaattctttaaaattttccaattacctcatccaaacatactattagaata 645728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 38506559 - 38506475
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||| |||||||||||| ||| ||||    
T  38506559 tttaaatgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattacttcattcaaacacactctaagagtatt 38506475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 47767890 - 47767978
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| |||||||||||||||||| ||||  || ||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  47767890 atgaaagcaatttaattgaatcatttgaattatcttgaattctaaattcttcaaaatttctcaaatactccatccaaacacactcttag 47767978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19475966 - 19476028
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  19475966 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 19476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 30767025 - 30767106
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||  ||  ||| ||||||||||||||||    
T  30767025 aatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaacactccattcaaacacactcttaga 30767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 8762276 - 8762338
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  8762276 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctta 8762338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 26547442 - 26547527
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||||||||| | |||| |||||||||||| |||||||||||||||||    
T  26547442 atgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcatcaaaa-ttctcaattaccccatccaaacacactctt 26547527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 7302857 - 7302942
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||||||||||||||| | ||||  |||||||||||||||||| |||||||||||| |||   |||||||||||||||    
T  7302857 atgaaagcaatttaattgaatcatatgaattatctagaattctaaattcttcaaaatttctcaaatactcaatccaaacacactct 7302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 13176268 - 13176195
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||  || ||||||||| ||||||||    
T  13176268 aatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacctcatacaaacaca 13176195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 53129511 - 53129434
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 89  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    ||||||||||| ||||||    
T  53129511 atgaaagtaatttaattgaatcatttaaattgccttaaattctaaattccttaaaaaaattcaattacctcgtccaaa 53129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 33871824 - 33871764
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  33871824 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccacacacactct 33871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 36636291 - 36636367
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 88  Q
    |||||||||||| |||||||| |||||| ||| |||||||| ||| ||||||||||||||||||||| | |||||||    
T  36636291 atgaaagtaattaaattgaataatttaatttgtctagaattataatttctttaaaatttctcaattatcgcatccaa 36636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 47714426 - 47714486
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||    
T  47714426 taaattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactct 47714486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 31188996 - 31188918
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||| |||||  ||||||||||| |||||||||||||||||| | | |||| ||||||||||||||    
T  31188996 aatttaattgaatcatttgaattgtttagaattctaatttctttaaaatttctcaa-tccttcattcaaacacactctta 31188918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13339168 - 13339118
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaattt 70  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13339168 aatttaattgaatcatttaaattgcctaaaattctaaattcttcaaaattt 13339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 46707089 - 46707139
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctt 62  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  46707089 atgaaagtaatttaattgaataatttaaattgcttagaattctaaattctt 46707139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 6836645 - 6836590
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaa 67  Q
    ||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||    
T  6836645 atgaaagcattttaattgaatcatttgaattgcctaaaattctaaattctttaaaa 6836590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 44288101 - 44288022
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||| ||| ||||| ||| |||| |||||| || ||||||||  ||||||||| ||||||||||||||||    
T  44288101 aatttaattgaatcttttgaattgtctaaaattataaatttttcaaaatttcctaattacctcgtccaaacacactctta 44288022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 2733026 - 2733084
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 78  Q
    |||||||||||||  ||| |||||||||| ||||||||||| |||||||||||||||||    
T  2733026 aatttaattgaatttttttaattgcctagtattctaaattccttaaaatttctcaatta 2733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 47283885 - 47283791
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattt------ctcaattacctcatccaaacacactcttag 100  Q
    ||||||| ||||||| ||||||||||||||| | || |||| ||||||||| |||||||      |||||||||  |||||||||||||||||||    
T  47283885 atgaaagcaatttaaatgaatcatttaaattacttaaaattttaaattcttcaaaatttctcattctcaattactccatccaaacacactcttag 47283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 54761486 - 54761417
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    ||||||| ||| |||| |||||||| ||||||||   |||||||||||||||||||||||| ||| ||||    
T  54761486 taaattgtctaaaattttaaattctgtaaaattttcaaattacctcatccaaacacactctaagagtatt 54761417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 55460738 - 55460810
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 92  Q
    |||||||||||| ||||| ||||||||| |||||||||||||| ||||    ||| || ||||||||||||||    
T  55460738 aatttaattgaaacatttgaattgcctaaaattctaaattcttaaaaaaaaatcatttgcctcatccaaacac 55460810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 46636321 - 46636376
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 75  Q
    |||||||||||||||||| ||||||||||||||  |||   |||||||||||||||    
T  46636321 aatttaattgaatcatttgaattgcctagaatttcaaaaaatttaaaatttctcaa 46636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 44329513 - 44329566
Alignment:
Q  14 gaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaat 68  Q
    |||||||||||| ||||||||||||||| || || |||| |||||||||||||||    
T  44329513 gaaagtaattta-ttgaatcatttaaatggcttaaaattttaaattctttaaaat 44329566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34936522 - 34936450
Alignment:
Q  19 taatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 91  Q
    ||||||||||||||||||| |||||| || |||| |||||| || ||||  | ||||||||||| | ||||||    
T  34936522 taatttaattgaatcatttgaattgcttaaaattttaaatttttcaaaaaatttcaattacctcgttcaaaca 34936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 47000192 - 47000270
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    ||||| || ||||||||||||||||| |||||| ||  |||||||   ||| ||||||| ||||||||||||| |||||||||    
T  47000192 atgaatgtcatttaattgaatcatttgaattgcttaacattctaa---cttaaaaattt-tcaattacctcattcaaacacac 47000270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 15467571 - 15467477
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  15467571 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttcttaattacctcatccaaacacactcttaggatatt 15467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 946844 - 946929
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  946844 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 28632211 - 28632126
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  28632211 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttataatttctcaattatctcatccaaacacactct 28632126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 21267431 - 21267343
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  21267431 atgaaagtaatttaattgaatcatctaaattgcctataattcgaaattctttaaaatttctcaattatctcatccaaacacactcttag 21267343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 220627 - 220704
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  220627 tttaattgaatcatttaaattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactctta 220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 6470314 - 6470225
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttt-aaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  6470314 atgaaaataatttaattaaatcatttaaattacctagaattctaaattctttaaaaatttctcaattgcctcatccaaacacactcttag 6470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32647757 - 32647829
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 84  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32647757 atgaaagtaatttaattgaatcatttaaattttctagaattctaaattctttaaaatttctcaattacctcat 32647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 37447508 - 37447426
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  37447508 aaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaaatacttcatccaaacacactct 37447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 37036589 - 37036504
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  37036589 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttcttaattaccccatccaaacacactct 37036504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 35499513 - 35499601
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||   |||||| ||||||||||||||||||||    
T  35499513 atgaatgtaatttaattgaatcatttaaattatctagaattctaaattctttaaaattttcaaattacttcatccaaacacactcttag 35499601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 48954009 - 48954097
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  48954009 atgaaagtaatttaattgaatcatttagatagcctaaaactctaaattcttcaaaatttctcaattagctcatccaaacatactcttag 48954097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 50472180 - 50472252
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 84  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  50472180 atgaaagtaatttaattgaataatttaaattgcctaaaattctaaattctttaaaatttctcaattatctcat 50472252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 39887530 - 39887621
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 103  Q
    ||||||| |||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||  |||||||||||||||| |||||    
T  39887530 atgaaagcaatttaattgaatcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacacactctaagaat 39887621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 31166675 - 31166761
Alignment:
Q  12 atgaaagtaatttaattgaatc-atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||| |||||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  31166675 atgaaagtaatttaatcgaatccatttaaattgactagatttctaaattctttacaatttctcaattacctgatccaaacacactct 31166761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 32128551 - 32128636
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||| ||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  32128551 aaaggaatttaattgaatcattaaaattacctaaaattttaaattctttaaaatttctcaattacctcgttcaaacacactcttag 32128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 37446968 - 37446883
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||    
T  37446968 atgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 37446883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 41822158 - 41822078
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 92  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  41822158 atgaaagcattttaaatgaattatttaaattgcctagaattctaaattctgtaaaatttctcaattacttcatccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 44571658 - 44571738
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||||||||||| |||||||||    
T  44571658 aaagtaatttaattgaatcgtttaaattacctaggattctaaattctttataatttcccaattacctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 8225237 - 8225324
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| ||||||||||| |||||| |||| |||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  8225237 atgaaagcaatttaattgattcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaaacacactctta 8225324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 47541911 - 47541851
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  47541911 taaattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 10166969 - 10167047
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| ||||| |||  |||||||    
T  10166969 tttaattgaatcatttgaattgcctagaattttaaattctttaaaatttatcaattaccttatccagacattctcttag 10167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 44571142 - 44571224
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    ||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| |||  |||||||||||||    
T  44571142 atgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaaatactccatccaaacacac 44571224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 23956061 - 23955981
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||  |||| |||| |||||| |||||    
T  23956061 aaagtaatttaattgaatcatttaaattgactaaaattctaaattttttaaaatttcctaattgcctcttccaaatacact 23955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 37448038 - 37447971
Alignment:
Q  30 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||| |||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  37448038 aatcatttgaattccctagaattctaaattcatcaaaatttctcaattaccccatccaaacacactct 37447971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 12293080 - 12293022
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  12293080 aattgcctagaattctaaattctttgagatttcccaattacctcatccaaacacactct 12293022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 24273142 - 24273081
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  24273142 aattgcgtagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 24273081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 4663775 - 4663861
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| | ||||||||||| |||| ||| || ||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||    
T  4663775 atgaaagcattttaattgaataatttgaat-gcttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactctta 4663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 41481039 - 41480952
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||| |||||||||||||| |||| || |||||| |||| ||||| ||||||||  | | ||||||||||||||||||||||||||    
T  41481039 atgaaattaatttaattgaataatttgaactgcctaaaattttaaatgctttaaaaaatttaaattacctcatccaaacacactctta 41480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 31196903 - 31196953
Alignment:
Q  49 aattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  31196903 aattctaaattctttaaaatttctcaattatctcatcctaacacactctta 31196953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 41577882 - 41577841
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41577882 atgaaagtaatttaattgaatcatttaaattgcctagaattc 41577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 41822829 - 41822752
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||| |||| |||| |||||||||||||| ||||||||| || |||  || |||||||||||||    
T  41822829 aatttaattgaatcatttgaattacctataattctaaattcttcaaaatttcttaaatactccacccaaacacactct 41822752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 32202216 - 32202297
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    ||||||||||||||||||||||||||||||| | || |||||||||   ||| |||||||  ||||| ||| ||||||||||    
T  32202216 atgaaagtaatttaattgaatcatttaaattacttaaaattctaaaaaatttcaaatttccaaattatctcgtccaaacaca 32202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 13182107 - 13182163
Alignment:
Q  36 ttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 92  Q
    |||||||||||| ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  13182107 ttaaattgcctaaaatttcaaattcttttaaatttctcaattgcctcatccaaacac 13182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 26501002 - 26500947
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 92  Q
    |||||| ||||||||| |||||||||||||||||   |||||||||||||||||||    
T  26501002 taaattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 47165135 - 47165072
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||| |||| |||| |||||||||||||||||   |||||||||||||||||||||| ||||    
T  47165135 taaattacctaaaattttaaattctttaaaattttcaaattacctcatccaaacacactgttag 47165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 45359030 - 45358975
Alignment:
Q  38 aaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||||||| |||||||||||||||||||    |||||| |||||||||||||||    
T  45359030 aaattgcctataattctaaattctttaaaaaaattcaatttcctcatccaaacaca 45358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 23969497 - 23969439
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| || |||| ||||||||||||||  | ||||||||| ||||||||||||||||    
T  23969497 aattgcttataattttaaattctttaaaaaatttcaattaccccatccaaacacactct 23969439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 31195977 - 31196023
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaat 58  Q
    |||||||||||||||| |||||||||||||  || ||||||||||||    
T  31195977 atgaaagtaatttaatagaatcatttaaatcacccagaattctaaat 31196023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 34003858 - 34003904
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaa 66  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||    
T  34003858 aatttaattgaatcatttaaactgtctataattctacattctttaaa 34003904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 32288049 - 32288012
Alignment:
Q  62 ttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  32288049 ttaaaatttctcaattaccacatccaaacagactctta 32288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 52134953 - 52134877
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 89  Q
    ||||| ||||||||||||| | |||| |||||| || ||||||||||| |||||||  | |||||||| |||||||||    
T  52134953 atgaatgtaatttaattgagttatttgaattgcttaaaattctaaattatttaaaaaat-tcaattacatcatccaaa 52134877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 14406130 - 14406086
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaatt 59  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||    
T  14406130 aaagaaattcaattgaatcatttaaattacctaaaattctaaatt 14406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 6e-41; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 39342245 - 39342160
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39342245 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 39342160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 23548204 - 23548117
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23548204 atgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 23548117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 28538762 - 28538675
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28538762 atgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 36328413 - 36328326
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36328413 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttaaaatttctcaattacctcatccaaacacactctta 36328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 2411776 - 2411861
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2411776 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacactctct 2411861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 42816987 - 42817074
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42816987 atgaaagtaattcaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatcctaacacactctta 42817074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 45984798 - 45984885
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  45984798 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactctta 45984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 45989158 - 45989245
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  45989158 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactctta 45989245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 14602856 - 14602771
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14602856 atgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacacactct 14602771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 35456269 - 35456356
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35456269 atgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaaattttcaattacctcatccaaacacactctta 35456356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 40496183 - 40496268
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  40496183 atgaaagtaatttaattgaatcatttaaattgcctagaattataaattctttaaaatttcttaattacctcatccaaacatactct 40496268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 43791486 - 43791573
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  43791486 atgaaaataatttaattgaatcatttaaattgccaagaattctaaattctttaaaattttccaattacctcatccaaacacactctta 43791573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 26416385 - 26416471
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  26416385 atgaaagtaatttaattgaattatttagattgcctagaattctaaattcttcaaaatttctcaattacctcat-caaacacactctta 26416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 30080390 - 30080312
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30080390 aaagtaatttaattgaatcatttaaattgcttagaattctaaattcttcaaaatttctcaattacctcatcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 30587515 - 30587436
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 91  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  30587515 atgaaagtaatttaattgaatcttttaaattgcctagaattctaaattctctaaaattttccaattacctcgtccaaaca 30587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41442680 - 41442601
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  41442680 aatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaattacccaatccaaacacactctta 41442601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 40495672 - 40495749
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40495672 aattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattacctcatccaaacacactct 40495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 14790554 - 14790621
Alignment:
Q  34 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  14790554 atttaaattgcctaggattctaaattctttaaaattttccaattacctcatccaaacacactcttaga 14790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 32650994 - 32651076
Alignment:
Q  18 gtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||  |||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||||||||    
T  32650994 gtaatttaattacatcatttaaattgcctaggattctgaattctttaagatttcccaattacctcatccaaactcactcttag 32651076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 45181830 - 45181753
Alignment:
Q  23 ttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    |||||||||| |||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  45181830 ttaattgaataatttcaattgcctagaattctaaactctctaaaattt-tcaattacctcatccaaacacactcttaga 45181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 9784536 - 9784455
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattc-tttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| || ||||||||||||    
T  9784536 aaagtaatttaattgaatcatctaaattgcctaaaattttaaattcttttaaaatttctcaattacttcgtccaaacacact 9784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 13814587 - 13814504
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||| |||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  13814587 atgaaagcaattgaattgaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccctattcaaacacact 13814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 38320751 - 38320825
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  38320751 aatttaattgtatcatttgaattgcctagaattttaaattctttaaaattt-tcaattaccacatccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 26162045 - 26161984
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  26162045 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 26161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 35488688 - 35488763
Alignment:
Q  23 ttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||| | ||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  35488688 ttaattgaatcatttaaataggctaaaattttaaattctttaaaattt-tcaattacatcatccaaacacactctta 35488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 37460541 - 37460466
Alignment:
Q  26 attgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| |||| ||||| |||||||| |||||||||||||| || |||||||||||||||||| |||||||||||    
T  37460541 attgaattatttgaattgtctagaattttaaattctttaaaaattttcaattacctcatccaaatacactcttaga 37460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 30629524 - 30629602
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaac 90  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||    |||||||||||||||||||    
T  30629524 atgaaagtaatttaattgaatcatttaaattgcctaaaattttaaattttaaaaaaaaaatcaattacctcatccaaac 30629602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 3905307 - 3905247
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3905307 aattgcctataaatctaaattctttaaaatttctcaattacctcaaccaaa-acactcttag 3905247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 46699832 - 46699747
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| ||||||||||||||| |||| |||||| || |||||||||||||| |||||||||||| || | | || |||||||||||    
T  46699832 atgaaggtaatttaattgaataatttgaattgcataaaattctaaattcttcaaaatttctcaactatcccgtctaaacacactct 46699747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 18926254 - 18926202
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaa 67  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  18926254 aaagtaatttaattgaatcatttaaattggctataattcaaaattctttaaaa 18926202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 6498674 - 6498611
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||| ||||   |||||||||||  |||||||||||||||||||||||||||    
T  6498674 taaattgcctagaattttaaagaatttaaaatttccaaattacctcatccaaacacactcttag 6498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 40667834 - 40667873
Alignment:
Q  61 tttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40667834 tttaaaatttctcaattacctcatccaaacacactcttag 40667873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 25188871 - 25188794
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||| |||||||||||| ||||||||||||||| || ||||    ||||||||| |||||||| |||||||    
T  25188871 aatttaattgagtcatttaaattgtctagaattctaaattattcaaaaaaattcaattaccacatccaaatacactct 25188794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 29639124 - 29639063
Alignment:
Q  37 taaattgcctagaattctaaa-ttctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||  ||| |||||||||||||   ||||||||||||||||||||||||    
T  29639124 taaattgcctagaatttaaaaattctttaaaattttcaaattacctcatccaaacacactct 29639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 45967521 - 45967578
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatt 77  Q
    ||||||||| ||| ||||||||||| || |||| ||||||||||||||||| ||||||    
T  45967521 aatttaattaaattatttaaattgcttaaaattttaaattctttaaaatttgtcaatt 45967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1580381 - 1580441
Alignment:
Q  40 attgcctagaattctaaattctttaaaatttctcaattacctcatccaa-acacactctta 99  Q
    |||||||| |||| ||||||||||||||  | ||||||||||||||||| |||||||||||    
T  1580381 attgcctaaaattttaaattctttaaaaaatttcaattacctcatccaacacacactctta 1580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5976195 - 5976117
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||||||||||  |||| || | |||||||||||||| | ||||||| |||| | ||| |||||||||    
T  5976195 aatttaattgaatcatttaaattatctag-atccaaaattctttaaaatgtatcaattatctcacctaaaaacactctta 5976117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 19865642 - 19865604
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaa 50  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  19865642 atgaaattaatttaattgaatcatttaaattacctagaa 19865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 46700637 - 46700667
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaa 50  Q
    |||||||||||||||||||||||||||||||    
T  46700637 aatttaattgaatcatttaaattgcctagaa 46700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 22391126 - 22391194
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaa 88  Q
    ||||||||||| |||||||||||| ||| ||||||||||| || ||||    ||||||||| |||||||    
T  22391126 aatttaattgagtcatttaaattgtctaaaattctaaattattcaaaaaaattcaattaccacatccaa 22391194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 6e-41; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 35470587 - 35470676
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35470587 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactcttaga 35470676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 2126301 - 2126389
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2126301 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttag 2126389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 42775865 - 42775777
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42775865 atgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 42775777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 40547853 - 40547766
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40547853 atgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaacacactctta 40547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 47108683 - 47108771
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  47108683 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacctcatccaaacacacacttag 47108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 28751829 - 28751744
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28751829 atgaaagtaatttaattgaatcatttaaattgcctataattctaaattttttaaaatttctcaattatctcatccaaacacactct 28751744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 46242707 - 46242622
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  46242707 atgaaagtaatttaattcaatcatttaaattgcttagaattataaattctttaaaatttcccaattacctcatccaaacacactct 46242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 26534951 - 26535038
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  26534951 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaactacat-atccaaacacattcttag 26535038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 21782436 - 21782523
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21782436 atgaaagtattttaatggaatcatttgaattgtctagaattctaaattctttaaaatttcacaattacctcatccaaacacactctta 21782523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 30303583 - 30303670
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30303583 atgaaggtagtttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattatctcatccaaacacactctta 30303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 41139935 - 41140020
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  41139935 atgaaaataatttaattgaatcatttaaattgcttagaattttaaattctttaaaatttctcaattacttcttccaaacacactct 41140020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 42776548 - 42776630
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  42776548 atgaaagtaattgaattgaatcatttaaattgcttaggattctaaattctttaaaattttccaattacctcatccaaacacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 56118251 - 56118170
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| |||||||||||||||||||||||||    
T  56118251 aaagtaatttaattaaatcatttaaattgcctagaattctgagttctctaaaatttgtcaattacctcatccaaacacactc 56118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 27284305 - 27284221
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||  ||||||||||||||||    
T  27284305 atgaaagtaatttaattgaaccatttaaattgcctagaattctaaattctttaaaattttcaaattatatcatccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 16516644 - 16516718
Alignment:
Q  25 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16516644 aattgaatcatttgaattaccaagaattctaaattcttcaaaatttctcaattacctcatccaaacacactctta 16516718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 13318299 - 13318216
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    ||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  13318299 atgaaagtaatttaattgaatcatttaaattccataaaat-ctaaattctttaaaatttctcaaatacatcatccaaacacactc 13318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 24705793 - 24705878
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  24705793 atgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcttcaaaatttttcaattaccccatccaaacacactct 24705878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 54566637 - 54566722
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||| ||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  54566637 atgaaagcaattgaattgaatcatttgaattcccttgaattttaaattcattaaaatttctcaattaccccatccaaacacactct 54566722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 46242250 - 46242169
Alignment:
Q  13 tgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||| |||||| || |||||| |||||||||||||||    
T  46242250 tgaaagcaatttaattgaatcatttaaattatctagaattctaaattcttcaaaattcct-aattacttcatccaaacacact 46242169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 10633181 - 10633241
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  10633181 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 10633241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 16299861 - 16299781
Alignment:
Q  13 tgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||| ||| ||||  |||||||||||| ||||||||    
T  16299861 tgaaagtaatttaattgaatcatttaaattaactagaattttaaattctctaatattttccaattacctcattcaaacaca 16299781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 31473999 - 31474062
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  31473999 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 31474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 31948044 - 31948119
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||  |||||||||| ||||||| ||||    
T  31948044 aatttaattgaatcatttaaattgcctaaaattttaaattctttaaaagtttccaattacctcgtccaaacgcact 31948119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 5579736 - 5579647
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| ||||||||||||||||||||||||  | ||||| ||||||||| |||||||   ||||||||||| ||||||||| ||||||    
T  5579736 atgaaaggaatttaattgaatcatttaaattgtttggaattttaaattcttcaaaattttctaattacctcattcaaacacacacttaga 5579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 19461343 - 19461264
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattcttt-aaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||| ||||||||||| |||| |||||||||| |||| |||| ||||||||||| ||||||||||||||    
T  19461343 aatttaattgaatcatctaaattgcctaaaattttaaattctttaaaaaattct-aattacctcattcaaacacactctta 19461264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 21012499 - 21012439
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  21012499 taaattgtctagaattttaaattctttaaaatttttaaattacctcatccaaacacactct 21012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 29091606 - 29091676
Alignment:
Q  30 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||| |||| |||||||||||||||| || |||||||||||| ||||  ||||||||||||||||||    
T  29091606 aatcatttgaattccctagaattctaaatttttcaaaatttctcaaataccctatccaaacacactcttag 29091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 17727504 - 17727564
Alignment:
Q  7 gtgagatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaa 67  Q
    |||| ||||||||||||||||||||||||||||||| ||   |||||||||||||||||||    
T  17727504 gtgaaatgaaagtaatttaattgaatcatttaaattaccctaaattctaaattctttaaaa 17727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9449495 - 9449412
Alignment:
Q  14 gaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| ||||||||||| |||||| ||||| |||||||||| ||||||| | ||    ||||||||||||||||||||||||||    
T  9449495 gaaagcaatttaattgattcattttaattgtctagaattctgaattcttcacaaaaaatcaattacctcatccaaacacactct 9449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 17727882 - 17727960
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctt-taaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||| |||| |||||| |||||||||||||||||  ||||    ||||||||||||||||||||||||||    
T  17727882 aatttaattgaataatttgaattgcttagaattctaaattcttcaaaaaaaattcaattacctcatccaaacacactct 17727960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 3803718 - 3803779
Alignment:
Q  41 ttgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 102  Q
    ||||||| |||| |||||||||||||||||   |||||||||||||||||||||||| ||||    
T  3803718 ttgcctaaaattttaaattctttaaaattttcaaattacctcatccaaacacactctaagaa 3803779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 41983368 - 41983417
Alignment:
Q  49 aattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  41983368 aattctaaattctttaaaatttctcaattatcccattcaaacacactctt 41983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 52294674 - 52294609
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatc 85  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||    ||||||||||||||    
T  52294674 aatttaattgaatcatttaaattgcctaaaattttaaattcattaaaaaaattcaattacctcatc 52294609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 53760377 - 53760322
Alignment:
Q  44 cctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||| ||||||||| ||||||||||||||||  |||||||||||| |||||    
T  53760377 cctagaattataaattcttcaaaatttctcaattactccatccaaacacaatctta 53760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 56339549 - 56339598
Alignment:
Q  30 aatcatttaaattgcctagaattctaaattctttaaaatttctcaattac 79  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  56339549 aatcatttgaattacctataattctaaattcttcaaaatttctcaattac 56339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 4490483 - 4490535
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttta 64  Q
    |||||||||||||||||||||  ||||||||| ||| ||||||||||| ||||    
T  4490483 atgaaagtaatttaattgaattgtttaaattgtctaaaattctaaattgttta 4490535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 5716110 - 5716190
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| | |||||||| |||||| ||||||||||||||| |  |||||||  |||||||| ||||||||| ||| ||||    
T  5716110 aatttaactaaatcatttcaattgcttagaattctaaattcatcgaaatttccaaattaccttatccaaacatactattag 5716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 43955081 - 43955048
Alignment:
Q  64 aaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||| |||||||||||||||||||||||||    
T  43955081 aaaatttcccaattacctcatccaaacacactct 43955048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 769496 - 769581
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  769496 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 769581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 1583417 - 1583312
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatattcaatg 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| ||    
T  1583417 atgaaagtaatttaatggaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaagagaattcagtg 1583318  T
Q  112 taattg 117  Q
    ||||||    
T  1583317 taattg 1583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 33188874 - 33188789
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33188874 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 33188789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 7309521 - 7309436
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7309521 atgaaagtaatttaattgaatcatttaaattgcttagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 44256098 - 44256183
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44256098 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacatactct 44256183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 35047286 - 35047198
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  35047286 atgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattaccccatccaaacacactcttag 35047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 3092713 - 3092795
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3092713 aaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 3092795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 19231101 - 19231017
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19231101 atgaaagtaatttaattgaatcatttaaattgcctagaattct-aattctttaaaatttctcaattacctcatccaaacacactct 19231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 39630690 - 39630775
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  39630690 atgaaagtaatttaattgaatcatttaaattgcctagaattttaaattttttaaaatttctcaattacctcatccaaacacactct 39630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 8736050 - 8735963
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8736050 atgaaagtaatttaattgaatcatttaaattgcttaggattctaaattctttaaaatttcccaattacctcatccaaacacactctta 8735963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 13018209 - 13018297
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  13018209 atgaaagtaatttaattgaattatttaaattacctagaattttaaattctttataatttctcaattacctcatccaaacacactcttag 13018297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 32839273 - 32839185
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32839273 atgaaagcaatttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattacctcatctaaacacactcttag 32839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 11141769 - 11141852
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11141769 atgaaattaatttaatggaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 14306449 - 14306362
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| | |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14306449 atgaaagcattttaattgaaccattttaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 14306362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 41585279 - 41585194
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  41585279 atgaaagtaatttaaatgaatcatttaaattgtcaagaattctaaattctttaaaatttatcaattacctcatccaaagacactct 41585194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 21504918 - 21505002
Alignment:
Q  16 aagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21504918 aagtaatttaattaaaacatttaaattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacacttttag 21505002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 2925125 - 2925200
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2925125 tttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattacttcatccaaacacactct 2925200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 28021781 - 28021704
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28021781 tttaattgaatcatttgaattgtcaagaattctaaattctttaaaatttctcaattagctcatccaaacacactctta 28021704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 19072305 - 19072385
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 102  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19072305 tttacttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattatctcatccaaacacactctaagaa 19072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 17906106 - 17906191
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||| |||||||||  ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906106 atgaaagtaatttaattgaattatttaaattatctataattttaaattctttataatttttcaattacctcatccaaacacactct 17906191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 7167273 - 7167185
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||| ||||    
T  7167273 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacacttttag 7167185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 7611504 - 7611421
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  7611504 atgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaattactccatccaaacacact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 11595269 - 11595328
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttc 71  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  11595269 atgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 11607171 - 11607230
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttc 71  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  11607171 atgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 30698745 - 30698830
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| ||||||||| |||||||| |||| |||| |||||||||||||| |||||||||||| |||  ||||||||||||||||    
T  30698745 atgaaagcaatttaattaaatcatttgaattacctaaaattctaaattcttcaaaatttctcaaatactccatccaaacacactct 30698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 31704000 - 31703923
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||| ||||| ||||||||||||||| | ||||||||  |||||||||||| ||||||||||||    
T  31704000 aatttaattgaatcatttgaattgactagaattctaaattatctaaaattttccaattacctcattcaaacacactct 31703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 31941428 - 31941507
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||| |||| ||||| ||| |||||||||||||| ||||||| ||||||||||| || |||||||||||||    
T  31941428 aatttaattgaataatttgaattgtctataattctaaattcttgaaaatttatcaattacctcgtcaaaacacactctta 31941507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 32839797 - 32839714
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||| |||| ||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||| || ||||||| ||||||    
T  32839797 aaagcaattgaattgaatcatttgaattctctagaattctaaattcttcaaaatttctcaattaccccacccaaacaaactctt 32839714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 19193828 - 19193746
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    ||||||||||||||||  || ||||||||||||||| |||| ||| || ||||||||||  ||||||||||||||||||||||    
T  19193828 atgaaagtaatttaatcaaaacatttaaattgcctaaaattttaatttttttaaaattttccaattacctcatccaaacacac 19193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 44205278 - 44205193
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| |||| |||| | ||||||||| ||| |||||||||||||||||| |||| ||||||||||  |||||||||||||||||    
T  44205278 atgaaaataatctaatcgtatcatttaagttgtctagaattctaaattcttaaaaaattctcaattatatcatccaaacacactct 44205193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 30265803 - 30265859
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaat 76  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  30265803 aatttaatttaatcatttgaattgcttagaattctaaattctttaaaatttctcaat 30265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 6749566 - 6749627
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  6749566 aattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacaagctcttag 6749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 10480269 - 10480329
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||| ||||||||    
T  10480269 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaagcacactct 10480329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 11794045 - 11794109
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||| |||||||| |||||||||||||||||   |||||||| |||||||||||||||||||    
T  11794045 taaattgtctagaattttaaattctttaaaattttcaaattacctaatccaaacacactcttaga 11794109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 2274386 - 2274312
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||||||||||| ||| |||| |||||| ||||||||||| |||||||||  |||||| |||||    
T  2274386 aatttaattgaatcatttaaattgtctaaaattataaattatttaaaatttc-caattacctagtccaaatacact 2274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 7684594 - 7684654
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| ||||| |||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  7684594 taaatggcctaaaattttaaattctttaaaatttttaaattaccttatccaaacacactct 7684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 11532174 - 11532118
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||||    
T  11532174 taaattgcctagaattttaaattctttaaaacttccaaattatctcatccaaacaca 11532118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 29278669 - 29278591
Alignment:
Q  14 gaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacac 92  Q
    ||||| ||||||||||| |||||| ||||| |||||||||||||||||| | ||    ||||||| |||||||||||||    
T  29278669 gaaagcaatttaattgattcattttaattgtctagaattctaaattcttcacaaaaaatcaattatctcatccaaacac 29278591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 6996420 - 6996371
Alignment:
Q  42 tgcctagaattctaaattctt-taaaatttctcaattacctcatccaaaca 91  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  6996420 tgcctagaattctaaattcttacaaaatttct-aattacctcatccaaaca 6996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 8736501 - 8736563
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||  ||||||| |||||||||||||||||   ||| |||||||||||| |||||||||    
T  8736501 taaattgggtagaattttaaattctttaaaattttcaaataacctcatccaaatacactctta 8736563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 45094050 - 45094000
Alignment:
Q  56 aattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    ||||||| ||||||||| ||||||| ||| |||||||||||||||| ||||    
T  45094050 aattcttcaaaatttcttaattaccccattcaaacacactcttagagtatt 45094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11799265 - 11799343
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat-ccaaacacactctta 99  Q
    |||||| |||||||||||||||||  || |||| || ||||| |||||||| |||||||| || | |||||||||||||||    
T  11799265 aatttacttgaatcatttaaattg--taaaattttatattctctaaaatttatcaattacttcgtcccaaacacactctta 11799343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 31220873 - 31220922
Alignment:
Q  49 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  31220873 aattctaaattctctaaaatttc-caatta--tcatccaaacacactcttaga 31220922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 8475593 - 8475678
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8475593 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatctaaacacactct 8475678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 1368940 - 1369027
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1368940 atgaaagtaatttaattgaatcatttaaattacctagaattttaaattctttataatttctcaattacctcgtccaaacacactctta 1369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 15616005 - 15615920
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||| |||||| |||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15616005 atgaaagtaatttaattgattcatttgaattgcctaatattttaaattctttaaaatttatcaattacctcatccaaacacactct 15615920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 10105480 - 10105556
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  10105480 tttaattgaatcattggaattgcctacaagtctaaattctttaaaatttctcaattacctcatccaaacacactctt 10105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 1195771 - 1195853
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||| ||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||    
T  1195771 aaagcaatttaattgaattatttaaattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactct 1195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 6357910 - 6357825
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||| |||||||||||||||||||||||| | || |||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  6357910 atgaaaataatttaattgaatcatttaaattacttaaaattctaaattcttcaaaatttcccaattacctcgtccaaacacactct 6357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 34244903 - 34244837
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 103  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34244903 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttagaat 34244837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 724896 - 724811
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| | ||| ||| |||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  724896 atgaaagcattttcatttaatcatttgaattacctagaattctaaattcttaaaaaattctcaattacctcatccaaacacactct 724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 28918621 - 28918706
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| |  || |||||||||||    
T  28918621 atgaaagtaatttaattgaatcatttaaattgcatagaattttaaattatttataatttctcaattactttgtctaaacacactct 28918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 31413337 - 31413412
Alignment:
Q  25 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  31413337 aatttaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacacacttttag 31413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 15833071 - 15833154
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||| ||||||||| |||||||| |||| |||| |||||| ||||||| ||||||||||||||||  ||||||||||||||    
T  15833071 atgaaagcaatttaattaaatcatttgaattacctaaaattctgaattcttcaaaatttctcaattactccatccaaacacact 15833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 13487425 - 13487487
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  13487425 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 13487487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 34364894 - 34364954
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  34364894 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 34364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 9697874 - 9697937
Alignment:
Q  34 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9697874 atttaaattatctaaaattctaaattctttaaaatttctcaattactccatccaaacacactct 9697937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 29889355 - 29889294
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaa-ttacctcatccaaacacactctta 99  Q
    |||||||||||||| ||||||||||||||  | |||| ||||||||||||||||||||||||    
T  29889355 aattgcctagaattttaaattctttaaaaaatttcaaattacctcatccaaacacactctta 29889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 26855548 - 26855480
Alignment:
Q  27 ttgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||||| |  || ||| | |||||||||||| ||||||||||||||| ||||| ||||||||||    
T  26855548 ttgaatcatttgatatgtctaaatttctaaattcttcaaaatttctcaattatctcattcaaacacact 26855480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 26901416 - 26901343
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||| ||||||||||| ||||||||||||||| |||   || ||||  | |||||||| |||||||||||||    
T  26901416 aatttatttgaatcatttgaattgcctagaattcaaaaaaattcaaaaaatttcaattacttcatccaaacaca 26901343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 22304647 - 22304736
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22304647 atgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacacacttaga 22304736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 41761829 - 41761744
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41761829 atgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactct 41761744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 17541966 - 17541880
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 101  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17541966 aaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 17541880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 12480364 - 12480452
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12480364 atgaaagtaatttaattgaatcatttaaattgcttagaattctaaattctttaaaattttccaattacctcatccaaacacactcttag 12480452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 927765 - 927850
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  927765 atgaaagtaatttaattaaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcattcaaacacactct 927850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 32249731 - 32249649
Alignment:
Q  15 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  32249731 aaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttcaaattacctcatccaaacacactct 32249649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 22304819 - 22304734
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  22304819 atgaaagtaatttaattgaatcatttaaattgcctaggattctaaattctttaaaatttcccaattacctcatcaaaatacactct 22304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 6771908 - 6771822
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  6771908 atgaaaataatttaattgaatcatttgaattgcatagaattctaaattctttaaaatttcccaattaactcatccaaacacactctt 6771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 33146545 - 33146632
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    |||||||||| |||||||||| ||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33146545 atgaaagtaacttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 33146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 22303473 - 22303385
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  22303473 atgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactccatccaaacacactcttag 22303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 37091051 - 37091135
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  37091051 atgaaagtaatttaattgaatcattttaattacctagagttctaaattctttaagatttaccaattacctcatccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 28489926 - 28490009
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||   ||||||||||||||||||||||    
T  28489926 atgaacgtaatttaattgaatcatttaaattgcctaggattctaaattccttaaaattttctaattacctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 1209130 - 1209213
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||   ||||||||||||||||||    
T  1209130 atgaaagtaatttaattgaatcatttaaattgtctaaatttctaaattctttaaaatttctcaat--gctcatccaaacacactct 1209213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 28490370 - 28490456
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattcttt-aaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||  | ||||||||||||||||||||||||||    
T  28490370 atgaaagtaatttaattgaatcatttaaattgccttgaattttaaattctttaaaaaaatttcaattacctcatccaaacacactct 28490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 13391025 - 13390961
Alignment:
Q  34 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13391025 atttaaattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacactctt 13390961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 15580084 - 15579996
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta-cctcatccaaacacactctta 99  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||  ||||| |||||||||||||||||||||    
T  15580084 atgaaaggaatttaattgaatcatttaaattgtctagaattttaaattttttaaaatttcctaattaccctcatccaaacacactctta 15579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 33995519 - 33995435
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 106  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  33995519 tttaattgaatcatttgaattgcctaaaattctaatttctttaaaatttgtcaattacatcatccaaacacactctaagagtatt 33995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 10315113 - 10315196
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||| |||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  10315113 atgaaagcaattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattaccccatccaaacacact 10315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 15270502 - 15270421
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    ||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15270502 atgaaagcattttaattgaatcatttcaattacctagaattctaaattctttaaaattttccaattacctcattcaaacaca 15270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 35111702 - 35111763
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35111702 aattccctagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttag 35111763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 8255434 - 8255506
Alignment:
Q  25 aattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  8255434 aattgaatcatttaaattgcctaaaattataaattcttcaaaatttctcaattatctcatccaaacatactct 8255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 25935209 - 25935151
Alignment:
Q  39 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25935209 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 25935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 14835265 - 14835338
Alignment:
Q  22 tttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||| | |||||||||||||    
T  14835265 tttaattgaatcatttaaattacctaaacttctaaattctttaaaatttcccaattactttatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 37241236 - 37241163
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    ||||||||||||| |||| ||||  |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37241236 aatttaattgaataatttgaattaactagaattctaaattcttcaaaatttctcaattaccccatccaaacaca 37241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 38178878 - 38178813
Alignment:
Q  24 taattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 89  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  38178878 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 38206102 - 38206037
Alignment:
Q  24 taattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaa 89  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  38206102 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38206037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 12064378 - 12064318
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  12064378 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 12064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 20320589 - 20320526
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||    
T  20320589 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactcttag 20320526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 40089475 - 40089412
Alignment:
Q  34 atttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||    
T  40089475 atttaaattgcctaggaatctaaattctttaaaatttcctaattacctcatccaaacacactct 40089412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 8264910 - 8264996
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||| |||||||||||||||||||||||||||| ||||||   |||||||||||||    ||||||| |||||||||||||||||||    
T  8264910 atgagagtaatttaattgaatcatttaaattgcttagaatataaaattctttaaaaaaattcaattagctcatccaaacacactctt 8264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 19533827 - 19533769
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  19533827 taaattgcctagaattttaaattctttaaaatttccaaattacctcattcaaacacact 19533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 31316595 - 31316666
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 91  Q
    ||||||||||||| ||||||||||  |||||||||||||||| ||||| ||  |||||| ||||||||||||    
T  31316595 aatttaattgaattatttaaattgtttagaattctaaattctataaaaatttccaattaactcatccaaaca 31316666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 31368316 - 31368395
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaca 91  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||| | |||||    ||||||| ||||||||||||    
T  31368316 atgaaagaaatttaattgaatcatttaaattgtttagaattctaaattttataaaaaaattcaattaactcatccaaaca 31368395  T

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Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 30519419 - 30519475
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatt 69  Q
    ||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  30519419 atgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30519475  T

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Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 30559759 - 30559815
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatt 69  Q
    ||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  30559759 atgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30559815  T

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Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 37722814 - 37722751
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 100  Q
    |||||| ||||||||| ||||||||||||||||||  ||||||   ||||||||||||||||||    
T  37722814 taaattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactcttag 37722751  T

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Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 32317145 - 32317222
Alignment:
Q  19 taatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||| |||||||| |||| | |||| || |||| ||||||||||||||||| |||||||||| |||||||||| ||||    
T  32317145 taattcaattgaataatttgacttgcttaaaattttaaattctttaaaattt-tcaattacctaatccaaacactctct 32317222  T

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Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 6955073 - 6955020
Alignment:
Q  46 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||||| |||||||    
T  6955073 tagaattctaaattcttaaaaatttctcaatccccttatccaaacatactctta 6955020  T

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Target: scaffold0301 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7616 - 7688
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7616 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 7688  T

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Target: scaffold0318 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 3321 - 3407
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 98  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3321 atgaaagtaatttaattgaatcatttaaattaactaaaattctaaattctttaaaatttctcaattacctcatccaaagacactctt 3407  T

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Target: scaffold0169 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 4483 - 4568
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 97  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  4483 atgaaagcattttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattagttcatccaaacacactct 4568  T

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Target: scaffold0417 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 11581 - 11499
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 94  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  11581 atgaaagtaatttaattaaatcatttaaattacttagaattctaaattctttaaaattttccaaatacctcatccaaacacac 11499  T

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Target: scaffold0129 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 19392 - 19333
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttc 71  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19392 atgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttc 19333  T

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Target: scaffold0337 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 16022 - 15959
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 75  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  16022 atgaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 15959  T

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Target: scaffold0337; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 15571 - 15500
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 83  Q
    ||||||| ||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  15571 atgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacctca 15500  T

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Target: scaffold0065 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 2613 - 2542
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctca 83  Q
    ||||||| ||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  2613 atgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacctca 2542  T

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Target: scaffold0065; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 3056 - 3001
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaa 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3056 aatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 3001  T

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Target: scaffold0047 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 49921 - 49838
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacact 95  Q
    |||||| ||||||||||||||||||| | || |||  |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  49921 atgaaattaatttaattgaatcatttgagttaccttaaattctaaattcttcaaaatttctcaattactccatccaaacacact 49838  T

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Target: scaffold0002 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 130720 - 130793
Alignment:
Q  20 aatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacaca 93  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||  || ||||||||| ||||||||    
T  130720 aatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacctcatacaaacaca 130793  T

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Target: scaffold0400 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 4105 - 4018
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| |||||||||||||||||| |||  ||||||||||||||||||| ||||  | |||| |||  ||||||||||||||||||    
T  4105 atgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactctta 4018  T

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Target: scaffold0365 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 4749 - 4662
Alignment:
Q  12 atgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 99  Q
    ||||||| |||||||||||||||||| |||  ||||||||||||||||||| ||||  | |||| |||  ||||||||||||||||||    
T  4749 atgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactctta 4662  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 11319 - 11378
Alignment:
Q  37 taaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 96  Q
    ||||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  11319 taaattgcctaaaattttaaattctttacaatttccaaattacctcatccaaacacactc 11378  T

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