View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16955_low_6 (Length: 324)

Name: NF16955_low_6
Description: NF16955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16955_low_6
NF16955_low_6
[»] chr3 (53 HSPs)
chr3 (49-281)||(26684747-26684979)
chr3 (51-278)||(16400961-16401188)
chr3 (51-278)||(24322355-24322582)
chr3 (51-278)||(24337707-24337934)
chr3 (150-292)||(19442353-19442495)
chr3 (49-281)||(17903703-17903934)
chr3 (150-292)||(16064554-16064694)
chr3 (53-281)||(47196970-47197198)
chr3 (166-274)||(10388311-10388419)
chr3 (166-274)||(10405684-10405792)
chr3 (166-274)||(26427486-26427594)
chr3 (166-277)||(6533274-6533385)
chr3 (166-277)||(6547105-6547216)
chr3 (187-278)||(28333633-28333724)
chr3 (187-278)||(28348735-28348826)
chr3 (172-278)||(17975215-17975320)
chr3 (172-278)||(17990763-17990868)
chr3 (172-278)||(18219527-18219632)
chr3 (172-278)||(18234835-18234940)
chr3 (182-278)||(5008027-5008121)
chr3 (182-278)||(5023286-5023380)
chr3 (182-278)||(28106545-28106639)
chr3 (182-278)||(28121781-28121875)
chr3 (166-274)||(6226727-6226835)
chr3 (166-274)||(22491567-22491675)
chr3 (166-274)||(26295408-26295516)
chr3 (166-274)||(50139876-50139984)
chr3 (187-278)||(8206136-8206227)
chr3 (187-278)||(8221305-8221396)
chr3 (182-277)||(29670791-29670885)
chr3 (204-282)||(22119370-22119448)
chr3 (142-292)||(18236946-18237095)
chr3 (142-292)||(18252303-18252452)
chr3 (187-278)||(18282897-18282989)
chr3 (187-278)||(18298198-18298290)
chr3 (187-278)||(18313499-18313591)
chr3 (166-266)||(26680364-26680464)
chr3 (202-277)||(29656147-29656222)
chr3 (187-274)||(48460259-48460346)
chr3 (187-274)||(48476018-48476105)
chr3 (206-274)||(5709816-5709884)
chr3 (206-274)||(5720726-5720794)
chr3 (206-274)||(5731629-5731697)
chr3 (206-274)||(5760671-5760739)
chr3 (206-274)||(51776540-51776608)
chr3 (206-274)||(51791626-51791694)
chr3 (187-274)||(43717028-43717115)
chr3 (205-238)||(37185850-37185883)
chr3 (205-245)||(10930916-10930956)
chr3 (205-245)||(15476975-15477015)
chr3 (205-235)||(8290261-8290291)
chr3 (53-111)||(26427371-26427431)
chr3 (205-238)||(28167120-28167153)
[»] chr4 (32 HSPs)
chr4 (51-281)||(35058050-35058280)
chr4 (51-278)||(30748004-30748231)
chr4 (51-278)||(30763309-30763536)
chr4 (51-278)||(33664295-33664522)
chr4 (51-278)||(33683107-33683334)
chr4 (49-281)||(34194816-34195047)
chr4 (150-289)||(4864562-4864700)
chr4 (182-278)||(19367606-19367701)
chr4 (154-274)||(36320827-36320947)
chr4 (154-274)||(36335036-36335156)
chr4 (154-274)||(36350126-36350246)
chr4 (204-278)||(762614-762688)
chr4 (172-278)||(21964086-21964191)
chr4 (172-278)||(21979336-21979441)
chr4 (166-291)||(4565044-4565169)
chr4 (187-291)||(20328941-20329046)
chr4 (187-291)||(20335970-20336075)
chr4 (206-278)||(9480445-9480517)
chr4 (187-278)||(14750004-14750096)
chr4 (187-278)||(14769107-14769199)
chr4 (187-278)||(43150836-43150928)
chr4 (166-274)||(54827819-54827927)
chr4 (166-274)||(54843046-54843154)
chr4 (202-277)||(18791119-18791194)
chr4 (202-277)||(18805747-18805822)
chr4 (166-274)||(14728815-14728923)
chr4 (51-149)||(33675922-33676021)
chr4 (104-189)||(17085757-17085842)
chr4 (205-238)||(26408159-26408192)
chr4 (205-235)||(15218485-15218515)
chr4 (205-235)||(19640749-19640779)
chr4 (205-238)||(16246040-16246073)
[»] chr8 (29 HSPs)
chr8 (51-278)||(6053595-6053822)
chr8 (51-278)||(31350180-31350407)
chr8 (51-278)||(31363980-31364207)
chr8 (150-292)||(16255458-16255600)
chr8 (150-292)||(14551887-14552028)
chr8 (166-292)||(14572727-14572852)
chr8 (150-292)||(18787599-18787740)
chr8 (166-292)||(29035840-29035965)
chr8 (51-282)||(4818340-4818571)
chr8 (173-291)||(19907683-19907801)
chr8 (150-291)||(22142367-22142507)
chr8 (166-281)||(4486806-4486921)
chr8 (166-291)||(31480314-31480439)
chr8 (166-291)||(31495460-31495585)
chr8 (173-291)||(2143052-2143169)
chr8 (142-278)||(19509763-19509897)
chr8 (166-274)||(3338108-3338216)
chr8 (173-291)||(2127882-2127999)
chr8 (206-274)||(19198956-19199024)
chr8 (206-274)||(19214011-19214079)
chr8 (187-274)||(40008228-40008315)
chr8 (206-274)||(28352598-28352666)
chr8 (206-274)||(28367783-28367851)
chr8 (53-149)||(44570479-44570575)
chr8 (205-239)||(28504902-28504936)
chr8 (205-239)||(29562182-29562216)
chr8 (187-224)||(3988257-3988294)
chr8 (53-105)||(4486982-4487034)
chr8 (205-245)||(17896636-17896676)
[»] chr5 (60 HSPs)
chr5 (51-278)||(37661881-37662108)
chr5 (51-278)||(37677164-37677391)
chr5 (150-292)||(7815145-7815286)
chr5 (49-281)||(27282789-27283020)
chr5 (150-280)||(34497998-34498127)
chr5 (187-292)||(15649183-15649289)
chr5 (187-292)||(15664559-15664665)
chr5 (166-291)||(29972755-29972880)
chr5 (166-291)||(30023763-30023888)
chr5 (166-274)||(18491116-18491224)
chr5 (166-274)||(18506431-18506539)
chr5 (187-278)||(30144127-30144218)
chr5 (187-278)||(30178177-30178268)
chr5 (142-278)||(28658863-28658998)
chr5 (182-278)||(28912706-28912800)
chr5 (182-278)||(28927974-28928068)
chr5 (166-291)||(30039027-30039152)
chr5 (182-278)||(32586731-32586825)
chr5 (182-278)||(32605160-32605254)
chr5 (182-278)||(42137245-42137339)
chr5 (166-274)||(5632432-5632540)
chr5 (166-274)||(5647306-5647414)
chr5 (166-274)||(13433051-13433159)
chr5 (166-274)||(13443945-13444053)
chr5 (182-277)||(43072623-43072717)
chr5 (182-277)||(43087910-43088004)
chr5 (142-278)||(24675686-24675821)
chr5 (142-278)||(24718213-24718348)
chr5 (142-278)||(24733673-24733808)
chr5 (142-278)||(28643459-28643594)
chr5 (172-278)||(33510751-33510856)
chr5 (172-278)||(33526014-33526119)
chr5 (173-274)||(12056305-12056406)
chr5 (166-274)||(3799263-3799371)
chr5 (206-278)||(28572911-28572983)
chr5 (206-281)||(26772708-26772783)
chr5 (206-292)||(2505374-2505460)
chr5 (206-292)||(2520694-2520780)
chr5 (163-289)||(30914075-30914200)
chr5 (166-263)||(15749411-15749508)
chr5 (166-263)||(15764639-15764736)
chr5 (166-274)||(3783908-3784016)
chr5 (182-274)||(37726403-37726495)
chr5 (142-278)||(29892494-29892629)
chr5 (206-274)||(6868800-6868868)
chr5 (206-274)||(6883924-6883992)
chr5 (51-149)||(13315306-13315405)
chr5 (51-149)||(13330633-13330732)
chr5 (51-149)||(31425672-31425771)
chr5 (51-149)||(31441010-31441109)
chr5 (79-154)||(23886431-23886506)
chr5 (79-154)||(23901073-23901148)
chr5 (49-105)||(26767948-26768003)
chr5 (205-245)||(18119150-18119190)
chr5 (205-245)||(18129530-18129570)
chr5 (205-245)||(23723838-23723878)
chr5 (210-238)||(26768106-26768134)
chr5 (205-245)||(30928939-30928979)
chr5 (205-245)||(30955823-30955863)
chr5 (210-238)||(41300451-41300479)
[»] chr1 (17 HSPs)
chr1 (51-278)||(47201187-47201415)
chr1 (150-292)||(4148318-4148459)
chr1 (53-281)||(47766795-47767023)
chr1 (164-290)||(18292414-18292539)
chr1 (164-291)||(18288036-18288162)
chr1 (182-278)||(16671716-16671810)
chr1 (182-278)||(41783869-41783963)
chr1 (182-278)||(41799137-41799231)
chr1 (166-274)||(14894050-14894158)
chr1 (154-274)||(30727846-30727966)
chr1 (166-274)||(48094526-48094634)
chr1 (166-274)||(13767674-13767782)
chr1 (51-149)||(47353678-47353777)
chr1 (182-277)||(36507492-36507586)
chr1 (53-149)||(28579212-28579306)
chr1 (53-149)||(28594638-28594732)
chr1 (205-235)||(31448680-31448710)
[»] scaffold1760 (1 HSPs)
scaffold1760 (51-278)||(1151-1378)
[»] scaffold1536 (1 HSPs)
scaffold1536 (53-278)||(761-986)
[»] chr7 (33 HSPs)
chr7 (49-281)||(23832112-23832343)
chr7 (49-282)||(39351347-39351579)
chr7 (150-291)||(39149843-39149983)
chr7 (186-289)||(18136494-18136597)
chr7 (166-278)||(17242047-17242157)
chr7 (166-278)||(31119382-31119494)
chr7 (182-278)||(32998938-32999032)
chr7 (142-292)||(5134372-5134521)
chr7 (142-292)||(5150966-5151115)
chr7 (166-274)||(26660388-26660496)
chr7 (166-274)||(26675581-26675689)
chr7 (166-274)||(26685718-26685826)
chr7 (166-274)||(31133557-31133665)
chr7 (182-277)||(4273950-4274044)
chr7 (164-291)||(14226569-14226695)
chr7 (142-278)||(26522391-26522526)
chr7 (187-278)||(16161506-16161598)
chr7 (166-274)||(26498568-26498676)
chr7 (166-274)||(26599353-26599461)
chr7 (175-274)||(26689258-26689357)
chr7 (182-274)||(11027506-11027598)
chr7 (206-274)||(4135805-4135873)
chr7 (206-274)||(4150731-4150799)
chr7 (206-274)||(26265331-26265399)
chr7 (206-274)||(26325363-26325431)
chr7 (206-274)||(26696469-26696537)
chr7 (205-274)||(2770926-2770995)
chr7 (205-274)||(2782981-2783050)
chr7 (104-189)||(16440886-16440971)
chr7 (104-189)||(16455789-16455874)
chr7 (205-239)||(34193522-34193556)
chr7 (205-239)||(34197163-34197197)
chr7 (209-238)||(10840423-10840452)
[»] scaffold0252 (1 HSPs)
scaffold0252 (51-281)||(1303-1532)
[»] scaffold0089 (1 HSPs)
scaffold0089 (150-292)||(24296-24437)
[»] chr2 (44 HSPs)
chr2 (150-292)||(26621341-26621482)
chr2 (187-278)||(15706881-15706972)
chr2 (170-278)||(39042367-39042474)
chr2 (170-278)||(39057701-39057808)
chr2 (182-278)||(16962705-16962800)
chr2 (53-292)||(34273592-34273831)
chr2 (53-292)||(34300599-34300838)
chr2 (187-278)||(35763284-35763375)
chr2 (182-278)||(19407023-19407117)
chr2 (182-278)||(19422023-19422117)
chr2 (166-274)||(251037-251145)
chr2 (166-274)||(266567-266675)
chr2 (166-274)||(5800059-5800167)
chr2 (173-289)||(28876492-28876608)
chr2 (173-289)||(28891702-28891818)
chr2 (166-274)||(37369490-37369598)
chr2 (166-274)||(37387324-37387432)
chr2 (142-292)||(37942356-37942505)
chr2 (142-278)||(12707072-12707207)
chr2 (142-278)||(12722472-12722607)
chr2 (172-278)||(16819855-16819960)
chr2 (172-278)||(16835096-16835201)
chr2 (172-278)||(16875077-16875182)
chr2 (204-278)||(27115187-27115261)
chr2 (204-278)||(27126152-27126226)
chr2 (182-276)||(31472881-31472974)
chr2 (166-274)||(13927135-13927243)
chr2 (166-274)||(13942331-13942439)
chr2 (166-274)||(22918691-22918799)
chr2 (166-274)||(22931801-22931909)
chr2 (182-277)||(34183647-34183741)
chr2 (172-278)||(32044179-32044284)
chr2 (172-278)||(32059375-32059480)
chr2 (166-263)||(10985725-10985822)
chr2 (166-274)||(34281345-34281453)
chr2 (206-274)||(16160210-16160278)
chr2 (206-274)||(16171111-16171179)
chr2 (206-274)||(27798235-27798303)
chr2 (206-274)||(27813324-27813392)
chr2 (49-105)||(13819758-13819813)
chr2 (205-238)||(10116588-10116621)
chr2 (205-238)||(17259172-17259205)
chr2 (210-238)||(13819627-13819655)
chr2 (210-238)||(28274545-28274573)
[»] scaffold0131 (1 HSPs)
scaffold0131 (140-281)||(23990-24131)
[»] scaffold0008 (1 HSPs)
scaffold0008 (150-291)||(225571-225711)
[»] scaffold0170 (1 HSPs)
scaffold0170 (164-291)||(681-807)
[»] chr6 (53 HSPs)
chr6 (53-281)||(27191930-27192158)
chr6 (53-281)||(27203783-27204011)
chr6 (53-281)||(27245220-27245448)
chr6 (53-281)||(27257083-27257311)
chr6 (142-277)||(4767301-4767436)
chr6 (142-277)||(4785727-4785862)
chr6 (166-274)||(16668490-16668598)
chr6 (182-278)||(27619803-27619898)
chr6 (182-278)||(27635413-27635508)
chr6 (166-277)||(4753199-4753310)
chr6 (166-277)||(4782482-4782593)
chr6 (187-278)||(27002081-27002172)
chr6 (187-278)||(27017587-27017678)
chr6 (165-290)||(19901662-19901786)
chr6 (166-274)||(16683772-16683880)
chr6 (166-274)||(26106933-26107041)
chr6 (166-274)||(26122165-26122273)
chr6 (173-289)||(26912901-26913017)
chr6 (173-289)||(26930188-26930304)
chr6 (142-292)||(29495662-29495811)
chr6 (142-292)||(29511000-29511149)
chr6 (182-277)||(27038769-27038863)
chr6 (182-277)||(27067108-27067202)
chr6 (172-278)||(7986955-7987060)
chr6 (142-278)||(29567264-29567399)
chr6 (142-278)||(29582670-29582805)
chr6 (172-278)||(30548468-30548573)
chr6 (172-278)||(30563738-30563843)
chr6 (187-278)||(29543828-29543920)
chr6 (187-278)||(29559238-29559330)
chr6 (187-278)||(31545029-31545121)
chr6 (206-292)||(26783467-26783553)
chr6 (206-292)||(26795440-26795526)
chr6 (206-292)||(27479455-27479541)
chr6 (206-292)||(27494709-27494795)
chr6 (173-275)||(4453151-4453253)
chr6 (173-275)||(28977932-28978034)
chr6 (206-274)||(4519716-4519784)
chr6 (206-274)||(4534903-4534971)
chr6 (187-274)||(2650663-2650750)
chr6 (79-151)||(26501620-26501692)
chr6 (49-105)||(16997182-16997237)
chr6 (49-105)||(27308201-27308256)
chr6 (49-96)||(27212300-27212346)
chr6 (49-96)||(27236882-27236928)
chr6 (205-239)||(12964893-12964927)
chr6 (207-263)||(8189442-8189498)
chr6 (210-238)||(16997340-16997368)
chr6 (205-245)||(20423522-20423562)
chr6 (205-245)||(22924999-22925039)
chr6 (210-238)||(27212458-27212486)
chr6 (210-238)||(27236742-27236770)
chr6 (210-238)||(27308070-27308098)
[»] scaffold0161 (1 HSPs)
scaffold0161 (173-289)||(28480-28596)
[»] scaffold0184 (1 HSPs)
scaffold0184 (187-278)||(24869-24960)
[»] scaffold0078 (1 HSPs)
scaffold0078 (187-278)||(47884-47975)
[»] scaffold0062 (1 HSPs)
scaffold0062 (187-278)||(55793-55884)
[»] scaffold1803 (1 HSPs)
scaffold1803 (166-274)||(1179-1287)
[»] scaffold0022 (1 HSPs)
scaffold0022 (173-279)||(155095-155201)
[»] scaffold0350 (1 HSPs)
scaffold0350 (182-278)||(13004-13098)
[»] scaffold1179 (1 HSPs)
scaffold1179 (166-274)||(1156-1264)
[»] scaffold0250 (1 HSPs)
scaffold0250 (172-275)||(1-104)
[»] scaffold0027 (1 HSPs)
scaffold0027 (172-278)||(130129-130234)
[»] scaffold0182 (1 HSPs)
scaffold0182 (154-278)||(3470-3594)
[»] scaffold1629 (1 HSPs)
scaffold1629 (206-278)||(626-698)
[»] scaffold0289 (1 HSPs)
scaffold0289 (187-278)||(16241-16333)
[»] scaffold0159 (1 HSPs)
scaffold0159 (166-274)||(16419-16527)
[»] scaffold0603 (1 HSPs)
scaffold0603 (206-292)||(28-114)
[»] scaffold1816 (1 HSPs)
scaffold1816 (206-274)||(647-715)
[»] scaffold0336 (1 HSPs)
scaffold0336 (206-274)||(2714-2782)
[»] scaffold0003 (1 HSPs)
scaffold0003 (104-189)||(18997-19082)
[»] scaffold0401 (1 HSPs)
scaffold0401 (205-238)||(15066-15099)
[»] scaffold0211 (1 HSPs)
scaffold0211 (205-245)||(12103-12143)
[»] scaffold0127 (1 HSPs)
scaffold0127 (205-245)||(25502-25542)
[»] scaffold0049 (1 HSPs)
scaffold0049 (205-235)||(36865-36895)
[»] scaffold0143 (1 HSPs)
scaffold0143 (209-238)||(21753-21782)


Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 49 - 281
Target Start/End: Original strand, 26684747 - 26684979
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26684747 ttagtttcaaaaccgtacaaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcatacttagaataaggagacgaat 26684846  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    | |||||||||||| ||||| | ||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  26684847 caattgatgtgaaaatttttaagttctggaaaattaggtcaccggagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 26684946  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||||||||||||||||||||||||||||||    
T  26684947 cgccgttgcttcatcctcaccggcggtgagttt 26684979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 16401188 - 16400961
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||| ||    
T  16401188 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgattc 16401089  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  16401088 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 16400990  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  16400989 gccgtggcttcatcctcaccggcggtgag 16400961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 24322355 - 24322582
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  24322355 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcatttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 24322454  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  ||  |||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  24322455 gtttgatgtagaaactttgaagttctggaaagttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 24322553  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  24322554 gccgtggcttcatcctcaccggcggtgag 24322582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 24337707 - 24337934
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  24337707 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcatttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 24337806  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  ||  |||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  24337807 gtttgatgtagaaactttgaagttctggaaagttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 24337905  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  24337906 gccgtggcttcatcctcaccggcggtgag 24337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 150 - 292
Target Start/End: Original strand, 19442353 - 19442495
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19442353 gattgatgtaaaaatttttgaattctggaaaattaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 19442452  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  19442453 gccgttgcttcatcctcaccggcggtgagttttagagagaggc 19442495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 49 - 281
Target Start/End: Original strand, 17903703 - 17903934
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||    
T  17903703 ttagtttcaaaaccgcacgaagatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaat 17903801  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || ||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  17903802 cgtttgatgtgaaaatctttgaattctggaaaattaggtcgccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 17903901  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||| ||||||||||||||||||||||||||    
T  17903902 cgccgtagcttcatcctcaccggcggtgagttt 17903934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 16064694 - 16064554
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  16064694 gattgatgtaaaattttt-gaattctggaaa-ttaggtcaccggaaagtgcataatctcgctggagaagatgaagtttccggcggaccttcaaggtctcc 16064597  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||| |||| |||||||| || ||||||||    
T  16064596 gccgttgcttcatcctcgccggtggtgagttctagagagaggc 16064554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 281
Target Start/End: Complemental strand, 47197198 - 47196970
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | |||||| |||||    |||   | ||||| ||||  | |   |||||||| |     
T  47197198 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgaaaaaatatttgctggattcgtgtttagcgttaaaggacgaatcaaa 47197099  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     | ||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47197098 aggtgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 47197000  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  47196999 cgtagcttcatcctcaccggcggtgagttt 47196970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 10388311 - 10388419
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10388311 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 10388410  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  10388411 cgccggcgg 10388419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 10405684 - 10405792
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10405684 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 10405783  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  10405784 cgccggcgg 10405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 26427486 - 26427594
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26427486 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26427585  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26427586 cgccggcgg 26427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 6533385 - 6533274
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  6533385 tttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcca 6533286  T
Q  266 caccggcggtga 277  Q
    | |||| |||||    
T  6533285 ctccggtggtga 6533274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 6547216 - 6547105
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  6547216 tttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcca 6547117  T
Q  266 caccggcggtga 277  Q
    | |||| |||||    
T  6547116 ctccggtggtga 6547105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 28333633 - 28333724
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28333633 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28333724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 28348735 - 28348826
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28348735 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28348826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 17975320 - 17975215
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  17975320 ttctggaaaattaggtcaccggagt-tgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 17975222  T
Q  272 cggtgag 278  Q
    |||||||    
T  17975221 cggtgag 17975215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 17990868 - 17990763
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  17990868 ttctggaaaattaggtcaccggagt-tgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 17990770  T
Q  272 cggtgag 278  Q
    |||||||    
T  17990769 cggtgag 17990763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 18219527 - 18219632
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18219527 ttctggaaaattaggtcaccggagt-tgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 18219625  T
Q  272 cggtgag 278  Q
    |||||||    
T  18219626 cggtgag 18219632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 18234835 - 18234940
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18234835 ttctggaaaattaggtcaccggagt-tgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 18234933  T
Q  272 cggtgag 278  Q
    |||||||    
T  18234934 cggtgag 18234940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 5008027 - 5008121
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5008027 ttaggtcaccggaa--ttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 5008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 5023286 - 5023380
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5023286 ttaggtcaccggaa--ttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 5023380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 28106639 - 28106545
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28106639 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 28121875 - 28121781
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28121875 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28121781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 6226727 - 6226835
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6226727 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 6226826  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  6226827 cgccggcgg 6226835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 22491567 - 22491675
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22491567 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 22491666  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  22491667 cgccggcgg 22491675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 26295408 - 26295516
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26295408 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26295507  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26295508 cgccggcgg 26295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 50139984 - 50139876
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50139984 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 50139885  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  50139884 cgccggcgg 50139876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 8206136 - 8206227
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8206136 tcaccggaaactgcttgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 8206227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 8221305 - 8221396
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8221305 tcaccggaaactgcttgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 8221396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 29670885 - 29670791
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29670885 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 29670791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 22119448 - 22119370
Alignment:
Q  204 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagtttt 282  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22119448 gtctcgacggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgagtttt 22119370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 18236946 - 18237095
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||||||| | ||| | ||||||||| ||   || |||||||||||  ||  ||||||||||||||||||| |||||||||||||||    
T  18236946 gacgaatcgtttgatgtgaaaatctttaagttctggaaatttt--tcgccggaaagtgcacaggactcgccggagaagatgaagcttccggcggaccttc 18237043  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  18237044 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 18237095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 18252303 - 18252452
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||||||| | ||| | ||||||||| ||   || |||||||||||  ||  ||||||||||||||||||| |||||||||||||||    
T  18252303 gacgaatcgtttgatgtgaaaatctttaagttctggaaatttt--tcgccggaaagtgcacaggactcgccggagaagatgaagcttccggcggaccttc 18252400  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  18252401 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 18252452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 18282989 - 18282897
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18282989 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 18282897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 18298290 - 18298198
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18298290 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 18298198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 18313591 - 18313499
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18313591 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 18313499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 266
Target Start/End: Complemental strand, 26680464 - 26680364
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26680464 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcaccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26680365  T
Q  266 c 266  Q
    |    
T  26680364 c 26680364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 29656222 - 29656147
Alignment:
Q  202 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29656222 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 29656147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 48460259 - 48460346
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  48460259 tcaccggaaactgcttgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 48460346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 48476018 - 48476105
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  48476018 tcaccggaaactgcttgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 48476105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 5709816 - 5709884
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5709816 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 5709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 5720726 - 5720794
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5720726 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 5720794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 5731629 - 5731697
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5731629 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 5731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 5760739 - 5760671
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5760739 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 5760671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 51776540 - 51776608
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  51776540 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 51776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 51791626 - 51791694
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  51791626 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 51791694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 43717028 - 43717115
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||||||| |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43717028 tcaccggaaactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcgg 43717115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 37185883 - 37185850
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||||||||||||||||||||||    
T  37185883 tctcgccggagaagatgaagtttccggcggacct 37185850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 10930956 - 10930916
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  10930956 tctcgccggagaagatgaagattccggcggaccttgaaggt 10930916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 15477015 - 15476975
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  15477015 tctcgccggagaagatgaagattccggcggaccttgaaggt 15476975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 8290261 - 8290291
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcgga 235  Q
    |||||||||||||||||||||||||||||||    
T  8290261 tctcgccggagaagatgaagtttccggcgga 8290291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 26427371 - 26427431
Alignment:
Q  53 tttcaaaaccgtacgaagttttttcc--gatctacgtcgtttcaagatttgtttgtaaaaa 111  Q
    |||||||||||||  |||||||||||  |||||||||||||||||| | |||||| |||||    
T  26427371 tttcaaaaccgtataaagttttttccaagatctacgtcgtttcaagctgtgtttggaaaaa 26427431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 28167153 - 28167120
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||| |||||||||||||    
T  28167153 tctcgccggagaagatgaagattccggcggacct 28167120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 51 - 281
Target Start/End: Complemental strand, 35058280 - 35058050
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||| ||||     
T  35058280 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagaagaata 35058181  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35058180 gtttgatgtagaaattttgaagttctggaaatttaggtcaccggag-gtgcttaggctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 35058082  T
Q  250 gccgttgcttcatcctcaccggcggtgagttt 281  Q
    ||||| ||||||||||||||||||||||||||    
T  35058081 gccgtagcttcatcctcaccggcggtgagttt 35058050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 30748004 - 30748231
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  30748004 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 30748103  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  30748104 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 30748202  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  30748203 gccgtggcttcatcctcaccggcggtgag 30748231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 30763309 - 30763536
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  30763309 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 30763408  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  30763409 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 30763507  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  30763508 gccgtggcttcatcctcaccggcggtgag 30763536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 33664522 - 33664295
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||| ||    
T  33664522 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgattc 33664423  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  33664422 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 33664324  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  33664323 gccgtggcttcatcctcaccggcggtgag 33664295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 33683334 - 33683107
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||| ||    
T  33683334 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgattc 33683235  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  33683234 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 33683136  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  33683135 gccgtggcttcatcctcaccggcggtgag 33683107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 281
Target Start/End: Complemental strand, 34195047 - 34194816
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    |||||||||||||||||||||  |||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||    
T  34195047 ttagtttcaaaaccgtacgaaaatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaat 34194949  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || |||||||| || ||||| | |||||||||||||||||||| || ||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  34194948 cgtttgatgtggaaatttttaagttctggaaaattaggtcaccagagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 34194849  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||| ||||||||||||||||||||||||||    
T  34194848 cgccgtagcttcatcctcaccggcggtgagttt 34194816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 4864562 - 4864700
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| ||||||| ||||||||| | ||||||||||||||| | |  |||||||||||||||||||||||||||||||||||||||||||||    
T  4864562 gattgatgtaaaaatttttgagttctggaaact-aggtcaccggaaagttcatgatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 4864660  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagaga 289  Q
    |||||  ||||||||||||||| |||||||| || |||||    
T  4864661 gccgtcacttcatcctcaccggtggtgagttctagagaga 4864700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 19367606 - 19367701
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19367606 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 19367701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 36320947 - 36320827
Alignment:
Q  154 gatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 253  Q
    ||||||||| | |||||  |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36320947 gatgtgaaaatctttgagatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 36320848  T
Q  254 ttgcttcatcctcaccggcgg 274  Q
    | ||||||||||| |||||||    
T  36320847 tagcttcatcctcgccggcgg 36320827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 36335156 - 36335036
Alignment:
Q  154 gatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 253  Q
    ||||||||| | |||||  |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36335156 gatgtgaaaatctttgagatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 36335057  T
Q  254 ttgcttcatcctcaccggcgg 274  Q
    | ||||||||||| |||||||    
T  36335056 tagcttcatcctcgccggcgg 36335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 36350246 - 36350126
Alignment:
Q  154 gatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 253  Q
    ||||||||| | |||||  |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36350246 gatgtgaaaatctttgagatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 36350147  T
Q  254 ttgcttcatcctcaccggcgg 274  Q
    | ||||||||||| |||||||    
T  36350146 tagcttcatcctcgccggcgg 36350126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 762688 - 762614
Alignment:
Q  204 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  762688 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 762614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 21964086 - 21964191
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21964086 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 21964184  T
Q  272 cggtgag 278  Q
    |||||||    
T  21964185 cggtgag 21964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 21979336 - 21979441
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21979336 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 21979434  T
Q  272 cggtgag 278  Q
    |||||||    
T  21979435 cggtgag 21979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 4565169 - 4565044
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4565169 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 4565070  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| | | |||| |||||||    
T  4565069 cgccggcggcggggtttagagagagg 4565044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 20329046 - 20328941
Alignment:
Q  187 tcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaa 285  Q
    |||||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |    
T  20329046 tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttaga 20328947  T
Q  286 gagagg 291  Q
    ||||||    
T  20328946 gagagg 20328941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 20336075 - 20335970
Alignment:
Q  187 tcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaa 285  Q
    |||||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |    
T  20336075 tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttaga 20335976  T
Q  286 gagagg 291  Q
    ||||||    
T  20335975 gagagg 20335970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 9480517 - 9480445
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9480517 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 9480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 14750096 - 14750004
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14750096 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 14750004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 14769199 - 14769107
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14769199 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 14769107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 43150836 - 43150928
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43150836 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 43150928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 54827819 - 54827927
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| |||||||| |||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54827819 tttgaaatctggaaatttaggtcatcggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 54827918  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  54827919 cgccggcgg 54827927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 54843046 - 54843154
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| ||| |||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54843046 tttgaaatctagaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 54843145  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  54843146 cgccggcgg 54843154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 18791194 - 18791119
Alignment:
Q  202 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18791194 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 18791119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 18805822 - 18805747
Alignment:
Q  202 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18805822 tagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 18805747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 14728815 - 14728923
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  14728815 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgtcgtagcttcatcct 14728914  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  14728915 cgccggcgg 14728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 33675922 - 33676021
Alignment:
Q  51 agtttcaaaaccgtacgaagtttt-ttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  33675922 agtttcaaaaccgtacggagtttttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 33676021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 17085757 - 17085842
Alignment:
Q  104 tgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattgatgtgaaattttttgaattctggaaaattaggtca 189  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||| |||| |  ||||||||| ||||||||    
T  17085757 tgtaaaaaccagtgccaaaatcatgcttagaataaagagacgaatcgattggagtgaaaattttaggtttctggaaatttaggtca 17085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 26408192 - 26408159
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||||||||||||||||||||||    
T  26408192 tctcgccggagaagatgaagtttccggcggacct 26408159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 15218485 - 15218515
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcgga 235  Q
    |||||||||||||||||||||||||||||||    
T  15218485 tctcgccggagaagatgaagtttccggcgga 15218515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 19640779 - 19640749
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcgga 235  Q
    |||||||||||||||||||||||||||||||    
T  19640779 tctcgccggagaagatgaagtttccggcgga 19640749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 16246073 - 16246040
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||| |||||||||||||    
T  16246073 tctcgccggagaagatgaagattccggcggacct 16246040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 6053822 - 6053595
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  6053822 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 6053723  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  6053722 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 6053624  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  6053623 gccgtggcttcatcctcaccggcggtgag 6053595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 31350180 - 31350407
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  31350180 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcatttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 31350279  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  ||  |||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  31350280 gtttgatgtagaaactttgaagttctggaaagttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 31350378  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  31350379 gccgtggcttcatcctcaccggcggtgag 31350407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 31363980 - 31364207
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  31363980 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcatttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 31364079  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  ||  |||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  31364080 gtttgatgtagaaactttgaagttctggaaagttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 31364178  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  31364179 gccgtggcttcatcctcaccggcggtgag 31364207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 16255600 - 16255458
Alignment:
Q  150 gattgatgtgaaatttttt-gaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16255600 gattgatgtcaaatttttttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctc 16255502  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||||||| |||||||| || ||||||||    
T  16255501 cgccgttgcttcatcctcaccggtggtgagttctagagagaggc 16255458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 292
Target Start/End: Original strand, 14551887 - 14552028
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  14551887 gattgatgtaaaaaattttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 14551985  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    | ||||||||||||||||||||||||||||| || ||||||||    
T  14551986 gtcgttgcttcatcctcaccggcggtgagttctagagagaggc 14552028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 14572727 - 14572852
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14572727 tttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 14572825  T
Q  266 caccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||| || ||||||||    
T  14572826 caccggcggtgagttctagagagaggc 14572852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 18787740 - 18787599
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  18787740 gattgatgtaaaaaattttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 18787642  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||||||||||| |||||||| || ||||||||    
T  18787641 gccgttgcttcatcctcaccggtggtgagttctagagagaggc 18787599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 29035840 - 29035965
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  29035840 tttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcct 29035938  T
Q  266 caccggcggtgagttttaaagagaggc 292  Q
    |||||| |||||||| || ||||||||    
T  29035939 caccggtggtgagttctagagagaggc 29035965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 51 - 282
Target Start/End: Complemental strand, 4818571 - 4818340
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcg 150  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| | |||||| |||||||  |||   | ||||| ||||  | |   ||||||||     
T  4818571 agtttcaaaaccgtatgaagttttttcagatctacgtcgtttcaagctgtgtttgaaaaaacctttgctggattcgtgtttagggttaaaggacgaatca 4818472  T
Q  151 attgatgtgaaattttttgaattctggaaaa-ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
      |||||| | | | ||||| |||||||||| |||||||||| ||  ||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  4818471 tctgatgtaagaatctttgagttctggaaaaattaggtcaccagag-gtgcaaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 4818373  T
Q  250 gccgttgcttcatcctcaccggcggtgagtttt 282  Q
    ||||| |||||||||||||||||||||||||||    
T  4818372 gccgtagcttcatcctcaccggcggtgagtttt 4818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 19907801 - 19907683
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  19907801 tctggaaatttaggtcaccggaaactgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcgcttcatcctcaccggt 19907702  T
Q  273 ggtgagttttaaagagagg 291  Q
    |||||||| || |||||||    
T  19907701 ggtgagttctagagagagg 19907683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 150 - 291
Target Start/End: Original strand, 22142367 - 22142507
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| ||||||| ||||||||| | ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  22142367 gattgatgtaaaaatttttgagttctggaaact-aggtcaccggaaagttcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 22142465  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagagg 291  Q
    |||||  |||||||||||||| ||||||||| || |||||||    
T  22142466 gccgtcacttcatcctcaccgacggtgagttctagagagagg 22142507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 4486921 - 4486806
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcc 264  Q
    ||||||||||||||| |||||||||||||  || | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4486921 tttgaattctggaaagttaggtcaccggag-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcc 4486823  T
Q  265 tcaccggcggtgagttt 281  Q
    |||||||||||||||||    
T  4486822 tcaccggcggtgagttt 4486806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 31480439 - 31480314
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31480439 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 31480340  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| ||| |||| |||||||    
T  31480339 cgccggcggcgaggtttagagagagg 31480314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 31495585 - 31495460
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31495585 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 31495486  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| ||| |||| |||||||    
T  31495485 cgccggcggcgaggtttagagagagg 31495460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 2143169 - 2143052
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||     
T  2143169 tctggaaatttaggtcaccggaac-tgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 2143071  T
Q  273 ggtgagttttaaagagagg 291  Q
    |||||||| || |||||||    
T  2143070 ggtgagttctagagagagg 2143052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 19509897 - 19509763
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttca 241  Q
    ||||||||| ||||||| ||| | ||||| ||||||||| ||   |||||||||| ||| |   ||||||||||||||||||||||||||||||||||||    
T  19509897 gacgaatcgtttgatgtaaaaatctttgagttctggaaatttt--tcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttca 19509800  T
Q  242 aggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19509799 aggtctccgccgtggcttcatcctcaccggcggtgag 19509763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 3338216 - 3338108
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3338216 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 3338117  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  3338116 cgccggcgg 3338108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 2127999 - 2127882
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||     
T  2127999 tctggaaatttaggtcaccggaac-tgcataatctcgccggagaagatgaagtttctggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 2127901  T
Q  273 ggtgagttttaaagagagg 291  Q
    |||||||| || |||||||    
T  2127900 ggtgagttctagagagagg 2127882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 19199024 - 19198956
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19199024 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 19198956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 19214079 - 19214011
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19214079 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 19214011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 40008315 - 40008228
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||||||| |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  40008315 tcaccggaaactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcgg 40008228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 28352666 - 28352598
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  28352666 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcgccggcgg 28352598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 28367851 - 28367783
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  28367851 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcgccggcgg 28367783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 44570479 - 44570575
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||  |||| |||||||||||||| |||| | |||||||  || |||||||||    
T  44570479 tttcaaaaccgtacggagttttttccgatctacgtcgtttcaagtttcatttgaaaaaaccagtgccagaatcatacttagaaggagaagacgaatc 44570575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 28504936 - 28504902
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacctt 239  Q
    |||||||||||||||||||| ||||||||||||||    
T  28504936 tctcgccggagaagatgaagattccggcggacctt 28504902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 29562216 - 29562182
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacctt 239  Q
    |||||||||||||||||||| ||||||||||||||    
T  29562216 tctcgccggagaagatgaagattccggcggacctt 29562182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 3988257 - 3988294
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaag 224  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  3988257 tcaccggaaagtgcataggctcgccggagaagatgaag 3988294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 4487034 - 4486982
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttg 105  Q
    ||||||||||| || |||||||| | |||||||||||||||||| | ||||||    
T  4487034 tttcaaaaccgcacaaagtttttccagatctacgtcgtttcaagctgtgtttg 4486982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 17896636 - 17896676
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  17896636 tctcgccggagaagatgaagattccggcgaaccttgaaggt 17896676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 37662108 - 37661881
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  37662108 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 37662009  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  37662008 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 37661910  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  37661909 gccgtggcttcatcctcaccggcggtgag 37661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 278
Target Start/End: Complemental strand, 37677391 - 37677164
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  37677391 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 37677292  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  37677291 gtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 37677193  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  37677192 gccgtggcttcatcctcaccggcggtgag 37677164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 292
Target Start/End: Original strand, 7815145 - 7815286
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7815145 gattgatgtaaaaaattttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 7815243  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||||||||||| |||||||| || ||||||||    
T  7815244 gccgttgcttcatcctcaccggtggtgagttctagagagaggc 7815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 49 - 281
Target Start/End: Original strand, 27282789 - 27283020
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    |||||||||||||||||||||  |||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||    
T  27282789 ttagtttcaaaaccgtacgaaaatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaat 27282887  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || |||||||| || ||||| | ||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27282888 cgtttgatgtggaaatttttaagttctggaaaattaggtcaccggagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 27282987  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||| ||||||||||||||||||||||||||    
T  27282988 cgccgtagcttcatcctcaccggcggtgagttt 27283020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 34498127 - 34497998
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| || |||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  34498127 gattgatgtaaatttttttgagttctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 34498029  T
Q  250 gccgttgcttcatcctcaccggcggtgagtt 280  Q
    |||||  ||||||||||||||||||||||||    
T  34498028 gccgtcacttcatcctcaccggcggtgagtt 34497998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 15649289 - 15649183
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag-ttttaaa 285  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  15649289 tcaccggaaagtgaataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagattttaga 15649190  T
Q  286 gagaggc 292  Q
    |||||||    
T  15649189 gagaggc 15649183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 15664665 - 15664559
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag-ttttaaa 285  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  15664665 tcaccggaaagtgaataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagattttaga 15664566  T
Q  286 gagaggc 292  Q
    |||||||    
T  15664565 gagaggc 15664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 29972880 - 29972755
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29972880 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 29972781  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| ||| |||| |||||||    
T  29972780 cgccggcggcgaggtttagagagagg 29972755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 30023763 - 30023888
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30023763 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 30023862  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| ||| |||| |||||||    
T  30023863 cgccggcggcgaggtttagagagagg 30023888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 18491224 - 18491116
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18491224 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 18491125  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  18491124 cgccggcgg 18491116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 18506539 - 18506431
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18506539 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 18506440  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  18506439 cgccggcgg 18506431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 30144127 - 30144218
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30144127 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 30144218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 30178177 - 30178268
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30178177 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 30178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 28658863 - 28658998
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||||||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  28658863 gacgaatcgtttgatgtaaaaatctttaagttctggaaaattt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 28658960  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28658961 aaggtctccgccgtggcttcatcctcaccggcggtgag 28658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 28912706 - 28912800
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28912706 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28912800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 28927974 - 28928068
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28927974 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28928068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 30039027 - 30039152
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||| ||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30039027 tttgaaatctggaaatttaggtcaccgaaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 30039126  T
Q  266 caccggcggtgagttttaaagagagg 291  Q
    | ||||||| ||| |||| |||||||    
T  30039127 cgccggcggcgaggtttagagagagg 30039152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 32586825 - 32586731
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32586825 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 32586731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 32605254 - 32605160
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32605254 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 32605160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 42137245 - 42137339
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42137245 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgag 42137339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 5632432 - 5632540
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5632432 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 5632531  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  5632532 cgccggcgg 5632540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 5647306 - 5647414
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5647306 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 5647405  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  5647406 cgccggcgg 5647414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 13433159 - 13433051
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13433159 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 13433060  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  13433059 cgccggcgg 13433051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 13444053 - 13443945
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13444053 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 13443954  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  13443953 cgccggcgg 13443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 43072623 - 43072717
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43072623 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 43072717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 43087910 - 43088004
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43087910 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 43088004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 24675686 - 24675821
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  24675686 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 24675783  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24675784 aaggtctccgccgtggcttcatcctcaccggcggtgag 24675821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 24718213 - 24718348
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  24718213 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 24718310  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24718311 aaggtctccgccgtggcttcatcctcaccggcggtgag 24718348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 24733673 - 24733808
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  24733673 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 24733770  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24733771 aaggtctccgccgtggcttcatcctcaccggcggtgag 24733808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 28643459 - 28643594
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  28643459 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 28643556  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28643557 aaggtctccgccgtggcttcatcctcaccggcggtgag 28643594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 33510751 - 33510856
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33510751 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 33510849  T
Q  272 cggtgag 278  Q
    |||||||    
T  33510850 cggtgag 33510856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 33526014 - 33526119
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33526014 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 33526112  T
Q  272 cggtgag 278  Q
    |||||||    
T  33526113 cggtgag 33526119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 274
Target Start/End: Complemental strand, 12056406 - 12056305
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  12056406 tctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggc 12056307  T
Q  273 gg 274  Q
    ||    
T  12056306 gg 12056305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 3799263 - 3799371
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3799263 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 3799362  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  3799363 cgccggcgg 3799371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 28572911 - 28572983
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28572911 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 28572983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 26772708 - 26772783
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26772708 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcagtagcttcatcctcaccggcggtgagttt 26772783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 2505374 - 2505460
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  2505374 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 2505460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 2520694 - 2520780
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  2520694 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 2520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 289
Target Start/End: Complemental strand, 30914200 - 30914075
Alignment:
Q  163 ttttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcat 262  Q
    |||||||| ||||||||| | |||||||| ||| || ||||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||    
T  30914200 ttttttgagttctggaaact-aggtcaccagaatgttcttagcctcgccggagaagatgaagttttcgacggaccttcaaggtctccgccgtcacttcat 30914102  T
Q  263 cctcaccggcggtgagttttaaagaga 289  Q
    ||||||||| |||||||| || |||||    
T  30914101 cctcaccggtggtgagttctagagaga 30914075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 15749508 - 15749411
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    |||||| |||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15749508 tttgaaatctggaaatttaggtcaccggaagttcataagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatc 15749411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 15764736 - 15764639
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    |||||| |||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15764736 tttgaaatctggaaatttaggtcaccggaagttcataagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatc 15764639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 3783908 - 3784016
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  |||||||||| |||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3783908 tttgaaatctggaattttaggtcaccagaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 3784007  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  3784008 cgccggcgg 3784016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 37726403 - 37726495
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  37726403 ttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 37726495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 29892629 - 29892494
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||  ||||||| ||| | ||| ||||||||||| ||   |||||||| ||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29892629 gacgaatcatttgatgtaaaaatctttaaattctggaaatttt--tcaccggagagtgcataggactcgccggagaagatgaagcttccggcggaccttc 29892532  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  29892531 aaggtctctgccgtggcttcatcctcaccggcggtgag 29892494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 6868800 - 6868868
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6868800 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 6868868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 6883924 - 6883992
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6883924 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 6883992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 13315405 - 13315306
Alignment:
Q  51 agtttcaaaaccgtacgaagt-tttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  13315405 agtttcaaaaccgtgcggagtctttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 13315306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 13330732 - 13330633
Alignment:
Q  51 agtttcaaaaccgtacgaagt-tttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  13330732 agtttcaaaaccgtgcggagtctttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 13330633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 31425672 - 31425771
Alignment:
Q  51 agtttcaaaaccgtacgaagt-tttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  31425672 agtttcaaaaccgtgcggagtctttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 31425771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 31441010 - 31441109
Alignment:
Q  51 agtttcaaaaccgtacgaagt-tttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  31441010 agtttcaaaaccgtgcggagtctttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 31441109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 23886431 - 23886506
Alignment:
Q  79 gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattg 154  Q
    ||||||||||| |||||  ||| ||||| |||||||||||||||||| |||||||||||  |||||||||||||||    
T  23886431 gatctacgtcgattcaaactttatttgtgaaaaccagtgccaaaatcatgcttagaatagagagacgaatcgattg 23886506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 23901073 - 23901148
Alignment:
Q  79 gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattg 154  Q
    ||||||||||| |||||  ||| ||||| |||||||||||||||||| |||||||||||  |||||||||||||||    
T  23901073 gatctacgtcgattcaaactttatttgtgaaaaccagtgccaaaatcatgcttagaatagagagacgaatcgattg 23901148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 26767948 - 26768003
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttg 105  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||    
T  26767948 ttagtttcaaaaccgtacgaagatttt-ccgatctacgtcgtttcaagctgtgtttg 26768003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 18119190 - 18119150
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  18119190 tctcgtcggagaagatgaagtttccggcgaaccttgaaggt 18119150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 18129570 - 18129530
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  18129570 tctcgtcggagaagatgaagtttccggcgaaccttgaaggt 18129530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 23723878 - 23723838
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  23723878 tctcgccggagaagatgaagattccggcgaaccttgaaggt 23723838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 26768106 - 26768134
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  26768106 ccggagaagatgaagtttccggcggacct 26768134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 30928939 - 30928979
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  30928939 tctcgccggagaagatgaagattccggcgaaccttgaaggt 30928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 30955823 - 30955863
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  30955823 tctcgccggagaagatgaagattccggcgaaccttgaaggt 30955863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 41300451 - 41300479
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  41300451 ccggagaagatgaagtttccggcggacct 41300479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 47201187 - 47201415
Alignment:
Q  51 agtttcaaaaccgtacgaagtttttt--ccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  47201187 agtttcaaaaccgtacgaagtttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaat 47201286  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || |||||||  || ||||  | ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  47201287 cgtttgatgtagaagttttgaagttctggaaatttaggtcaccgg-aggtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctc 47201385  T
Q  249 cgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||| |||||||||||||||||||||||    
T  47201386 cgccgtggcttcatcctcaccggcggtgag 47201415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 4148459 - 4148318
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  4148459 gattgatgtaaaaatttttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 4148361  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||||||||||| |||||||| || ||||||||    
T  4148360 gccgttgcttcatcctcaccggtggtgagttctagagagaggc 4148318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 281
Target Start/End: Original strand, 47766795 - 47767023
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | |||||  ||||| |  |||   | ||||| ||||  | |   |||||||| |     
T  47766795 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttaaaaaaatctttgctggattcgtgtttagggttaaaggacgaatcaaa 47766894  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     ||||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47766895 agatgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 47766993  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  47766994 cgtagcttcatcctcaccggcggtgagttt 47767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 18292414 - 18292539
Alignment:
Q  164 tttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    ||||||| ||||||||| | |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18292414 tttttgagttctggaaact-aggtcatcggaatgttcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatc 18292512  T
Q  264 ctcaccggcggtgagttttaaagagag 290  Q
    |||||||| |||||||| || ||||||    
T  18292513 ctcaccggtggtgagttctagagagag 18292539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 291
Target Start/End: Original strand, 18288036 - 18288162
Alignment:
Q  164 tttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    |||||||| |||||||  ||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18288036 tttttgaaatctggaat-ttaggtcgccggaaagtgcatgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatc 18288134  T
Q  264 ctcaccggcggtgagttttaaagagagg 291  Q
    |||||||| |||||||| || |||||||    
T  18288135 ctcaccggtggtgagttctagagagagg 18288162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 16671716 - 16671810
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16671716 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 16671810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 41783963 - 41783869
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41783963 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 41783869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 41799231 - 41799137
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41799231 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 41799137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 14894050 - 14894158
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14894050 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 14894149  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  14894150 cgccggcgg 14894158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 30727966 - 30727846
Alignment:
Q  154 gatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 253  Q
    ||||||||| | ||| || |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30727966 gatgtgaaaatctttcaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccg 30727867  T
Q  254 ttgcttcatcctcaccggcgg 274  Q
    | ||||||||||| |||||||    
T  30727866 tagcttcatcctcgccggcgg 30727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 48094526 - 48094634
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48094526 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 48094625  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  48094626 cgccggcgg 48094634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 13767782 - 13767674
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13767782 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 13767683  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  13767682 cgccggcgg 13767674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 47353777 - 47353678
Alignment:
Q  51 agtttcaaaaccgtacgaagtttttt-ccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||||||    
T  47353777 agtttcaaaaccgtacggagtttttttccgatctacgtcgtttcaagattcgtttgaaaaaaccagtgccagaatcatacttagaataagaagacgaatc 47353678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 36507492 - 36507586
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||    
T  36507492 ttaggtcaccggaa-gttcatagtctcaccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcttcaccgacggtga 36507586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 28579212 - 28579306
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    ||||||||||||| ||   |||| ||||||||||||||||||||| | |||||  ||||||||||||| |||| | ||||||||||| |||||||||    
T  28579212 tttcaaaaccgtatgagtcttttcccgatctacgtcgtttcaagaatcgtttg--aaaaccagtgccagaatcatacttagaataagaagacgaatc 28579306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 28594638 - 28594732
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    ||||||||||||| ||   |||| ||||||||||||||||||||| | |||||  ||||||||||||| |||| | ||||||||||| |||||||||    
T  28594638 tttcaaaaccgtatgagtcttttcccgatctacgtcgtttcaagaatcgtttg--aaaaccagtgccagaatcatacttagaataagaagacgaatc 28594732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 31448710 - 31448680
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcgga 235  Q
    |||||||||||||||||||||||||||||||    
T  31448710 tctcgccggagaagatgaagtttccggcgga 31448680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold1760
Description:

Target: scaffold1760; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 1151 - 1378
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatc 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  1151 agtttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcatttgtaaaaaccagtgccaaaatcatacttagaataagaagacgaatc 1250  T
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    | |||||||  ||  |||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  1251 gtttgatgtagaaactttgaagttctggaaagttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctcc 1349  T
Q  250 gccgttgcttcatcctcaccggcggtgag 278  Q
    ||||| |||||||||||||||||||||||    
T  1350 gccgtggcttcatcctcaccggcggtgag 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1536 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold1536
Description:

Target: scaffold1536; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 53 - 278
Target Start/End: Original strand, 761 - 986
Alignment:
Q  53 tttcaaaaccgtacgaagttttttcc-gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcga 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || | ||||| ||||| ||||||||||     
T  761 tttcaaaaccgtacgaagttttttcccgatctacgtcgtttcaagattcgtttgtaaaaaccagtgccaaactcatacttaggataagaagacgaatcgt 860  T
Q  152 ttgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
    |||||||  || ||||  | ||||||||| |||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||    
T  861 ttgatgtagaagttttgaagttctggaaatttaggtcaccggag-gtgcttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgc 959  T
Q  252 cgttgcttcatcctcaccggcggtgag 278  Q
    ||| |||||||||||||||||||||||    
T  960 cgtggcttcatcctcaccggcggtgag 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 281
Target Start/End: Complemental strand, 23832343 - 23832112
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||    
T  23832343 ttagtttcaaaaccgcacgaagatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaat 23832245  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || ||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  23832244 cgtttgatgtgaaaatctttgaattctggaaaattaggtcaccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 23832145  T
Q  249 cgccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||||| ||||||||||||||||||||||||||    
T  23832144 cgccgtagcttcatcctcaccggcggtgagttt 23832112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 282
Target Start/End: Complemental strand, 39351579 - 39351347
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaat 148  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||    
T  39351579 ttagtttcaaaaccgtacgaagatttt-cagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaat 39351481  T
Q  149 cgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctc 248  Q
    || ||||||||||| | ||||||||||||||| ||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  39351480 cgtttgatgtgaaaatctttgaattctggaaagttaggtcaccggagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctc 39351381  T
Q  249 cgccgttgcttcatcctcaccggcggtgagtttt 282  Q
    |||||| |||||||||||||||||||||||||||    
T  39351380 cgccgtagcttcatcctcaccggcggtgagtttt 39351347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 150 - 291
Target Start/End: Original strand, 39149843 - 39149983
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  39149843 gattgatgtaaaaatttttgatttctggaaa-ttaggtcaccggaaagttcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 39149941  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagagg 291  Q
    |||||  |||||||||||||||||||||||| || |||||||    
T  39149942 gccgtcacttcatcctcaccggcggtgagttctagagagagg 39149983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 18136494 - 18136597
Alignment:
Q  186 gtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaa 285  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18136494 gtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaga 18136593  T
Q  286 gaga 289  Q
    ||||    
T  18136594 gaga 18136597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 17242047 - 17242157
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||||||||||||| ||   |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17242047 tttgaattctggaaatttt--tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 17242144  T
Q  266 caccggcggtgag 278  Q
    |||||||||||||    
T  17242145 caccggcggtgag 17242157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 31119382 - 31119494
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31119382 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 31119481  T
Q  266 caccggcggtgag 278  Q
    | |||||||||||    
T  31119482 cgccggcggtgag 31119494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 32999032 - 32998938
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32999032 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 32998938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 5134521 - 5134372
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  5134521 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 5134424  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  5134423 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 5134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 5151115 - 5150966
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  5151115 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 5151018  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  5151017 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 5150966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26660496 - 26660388
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26660496 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26660397  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26660396 cgccggcgg 26660388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26675689 - 26675581
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26675689 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26675590  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26675589 cgccggcgg 26675581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26685826 - 26685718
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26685826 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26685727  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26685726 cgccggcgg 26685718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 31133557 - 31133665
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31133557 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 31133656  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  31133657 cgccggcgg 31133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 4273950 - 4274044
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4273950 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 4274044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 14226695 - 14226569
Alignment:
Q  164 tttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    ||||||| ||||||||| | ||||||||||||||| | |  ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  14226695 tttttgagttctggaaact-aggtcaccggaaagttcatgatctcgccggagaagatgaagtttccagcggaccttcaaggtctccgccgtcacttcatc 14226597  T
Q  264 ctcaccggcggtgagttttaaagagagg 291  Q
    |||||||| |||||||| || |||||||    
T  14226596 ctcaccggtggtgagttctagagagagg 14226569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 26522391 - 26522526
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  26522391 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 26522488  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26522489 aaggtctccgccgtggcttcatcctcaccggcggtgag 26522526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 16161506 - 16161598
Alignment:
Q  187 tcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16161506 tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgag 16161598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26498676 - 26498568
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26498676 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26498577  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26498576 cgccggcgg 26498568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 26599353 - 26599461
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26599353 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26599452  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26599453 cgccggcgg 26599461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 26689357 - 26689258
Alignment:
Q  175 tggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26689357 tggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 26689258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 11027598 - 11027506
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11027598 ttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 11027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 4135873 - 4135805
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4135873 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 4135805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 4150799 - 4150731
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4150799 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 4150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 26265399 - 26265331
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26265399 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 26265331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 26325431 - 26325363
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26325431 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 26325363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 26696469 - 26696537
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26696469 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 26696537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 2770926 - 2770995
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2770926 tctcaccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 2770995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 2782981 - 2783050
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  2782981 tctcaccggagaagatgaagtttccgacggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 2783050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 16440971 - 16440886
Alignment:
Q  104 tgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattgatgtgaaattttttgaattctggaaaattaggtca 189  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||||  |||||| |||| |  ||||||||| ||||||||    
T  16440971 tgtaaaaaccagtgccgaaatcatgcttagaataaagagacgaatcgattggagtgaaaattttaggtttctggaaatttaggtca 16440886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 16455874 - 16455789
Alignment:
Q  104 tgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattgatgtgaaattttttgaattctggaaaattaggtca 189  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||||  |||||| |||| |  ||||||||| ||||||||    
T  16455874 tgtaaaaaccagtgccgaaatcatgcttagaataaagagacgaatcgattggagtgaaaattttaggtttctggaaatttaggtca 16455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 34193522 - 34193556
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacctt 239  Q
    |||||||||||||||||||| ||||||||||||||    
T  34193522 tctcgccggagaagatgaagattccggcggacctt 34193556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 34197197 - 34197163
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacctt 239  Q
    |||||||||||||||||||| ||||||||||||||    
T  34197197 tctcgccggagaagatgaagattccggcggacctt 34197163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 238
Target Start/End: Complemental strand, 10840452 - 10840423
Alignment:
Q  209 gccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||||||||||||||||||    
T  10840452 gccggagaagatgaagtttccggcggacct 10840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 51 - 281
Target Start/End: Complemental strand, 1532 - 1303
Alignment:
Q  51 agtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcg 150  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |||||||  |||   | ||||| ||||  | |   ||||||||     
T  1532 agtttcaaaaccgtacgaagttttttcagatctacgtcgtttcaagctgtgtttgaaaaaacctttgctggattcgtgtttagggttaaaggacgaatca 1433  T
Q  151 attgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccg 250  Q
    |  ||||| ||| | ||||||||||||||| |||||||||||||  ||   ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1432 agagatgtaaaaatctttgaattctggaaagttaggtcaccggag-gtttataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccg 1334  T
Q  251 ccgttgcttcatcctcaccggcggtgagttt 281  Q
    |||| ||||||||||||||||||||||||||    
T  1333 ccgtagcttcatcctcaccggcggtgagttt 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 150 - 292
Target Start/End: Original strand, 24296 - 24437
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  24296 gattgatgtaaaaaattttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 24394  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||||||||||| ||||| || || ||||||||    
T  24395 gccgttgcttcatcctcaccggtggtgacttctagagagaggc 24437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 26621482 - 26621341
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  26621482 gattgatgtaaaaaattttgaattctggaaa-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 26621384  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||  ||||||||||||||| |||||||| || ||||||||    
T  26621383 gccgtcacttcatcctcaccggtggtgagttctagagagaggc 26621341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 15706972 - 15706881
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15706972 tcaccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 15706881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 39042474 - 39042367
Alignment:
Q  170 aattctggaaaatt-aggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcac 268  Q
    ||||||||||| || |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39042474 aattctggaaattttaggtcaccgga--gttcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcac 39042377  T
Q  269 cggcggtgag 278  Q
    ||||||||||    
T  39042376 cggcggtgag 39042367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 39057808 - 39057701
Alignment:
Q  170 aattctggaaaatt-aggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcac 268  Q
    ||||||||||| || |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39057808 aattctggaaattttaggtcaccgga--gttcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcac 39057711  T
Q  269 cggcggtgag 278  Q
    ||||||||||    
T  39057710 cggcggtgag 39057701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 16962800 - 16962705
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16962800 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 16962705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 292
Target Start/End: Original strand, 34273592 - 34273831
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||| |     
T  34273592 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcaaa 34273691  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcc 252  Q
     ||||| ||| | ||| | ||||||||||||   |||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34273692 agatgtaaaaatctttaagttctggaaaatttt-tcaccggagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcc 34273790  T
Q  253 gttgcttcatcctcaccggcggtgag-ttttaaagagaggc 292  Q
    || ||||||||||||||||||||||| ||||| ||||||||    
T  34273791 gtggcttcatcctcaccggcggtgagattttagagagaggc 34273831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 292
Target Start/End: Original strand, 34300599 - 34300838
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||||| |     
T  34300599 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaatcaaa 34300698  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcc 252  Q
     ||||| ||| | ||| | ||||||||||||   |||||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34300699 agatgtaaaaatctttaagttctggaaaatttt-tcaccggagagttcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcc 34300797  T
Q  253 gttgcttcatcctcaccggcggtgag-ttttaaagagaggc 292  Q
    || ||||||||||||||||||||||| ||||| ||||||||    
T  34300798 gtggcttcatcctcaccggcggtgagattttagagagaggc 34300838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 35763284 - 35763375
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35763284 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 35763375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 19407117 - 19407023
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19407117 ttaggtcaccggaa--ttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 19407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 19422117 - 19422023
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19422117 ttaggtcaccggaa--ttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 19422023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 251145 - 251037
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||| | |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  251145 tttgaaatctggaaaattaggtcaccggagactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcct 251046  T
Q  266 caccggcgg 274  Q
    |||||||||    
T  251045 caccggcgg 251037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 266675 - 266567
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||| | |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  266675 tttgaaatctggaaaattaggtcaccggagactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcct 266576  T
Q  266 caccggcgg 274  Q
    |||||||||    
T  266575 caccggcgg 266567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 5800059 - 5800167
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||| | |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  5800059 tttgaaatctggaaaattaggtcaccggatactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcct 5800158  T
Q  266 caccggcgg 274  Q
    |||||||||    
T  5800159 caccggcgg 5800167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 28876492 - 28876608
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||     
T  28876492 tctggaaatttaggtcaccggaaactgcatgatctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 28876591  T
Q  273 ggtgagttttaaagaga 289  Q
    |||||||| || |||||    
T  28876592 ggtgagttctagagaga 28876608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 28891702 - 28891818
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||     
T  28891702 tctggaaatttaggtcaccggaaactgcatgatctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 28891801  T
Q  273 ggtgagttttaaagaga 289  Q
    |||||||| || |||||    
T  28891802 ggtgagttctagagaga 28891818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 37369490 - 37369598
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37369490 tttgaaatctggaaatttaggtcaccggaagttcataagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 37369589  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  37369590 cgccggcgg 37369598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 37387324 - 37387432
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37387324 tttgaaatctggaaatttaggtcaccggaagttcataagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 37387423  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  37387424 cgccggcgg 37387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 37942505 - 37942356
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  37942505 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 37942408  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  37942407 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 37942356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 12707207 - 12707072
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  12707207 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 12707110  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12707109 aaggtctccgccgtggcttcatcctcaccggcggtgag 12707072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 12722607 - 12722472
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  12722607 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 12722510  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12722509 aaggtctccgccgtggcttcatcctcaccggcggtgag 12722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 16819960 - 16819855
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16819960 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 16819862  T
Q  272 cggtgag 278  Q
    |||||||    
T  16819861 cggtgag 16819855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 16835201 - 16835096
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16835201 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 16835103  T
Q  272 cggtgag 278  Q
    |||||||    
T  16835102 cggtgag 16835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 16875182 - 16875077
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16875182 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 16875084  T
Q  272 cggtgag 278  Q
    |||||||    
T  16875083 cggtgag 16875077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 27115187 - 27115261
Alignment:
Q  204 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27115187 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 27126152 - 27126226
Alignment:
Q  204 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27126152 gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27126226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 31472974 - 31472881
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtg 276  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31472974 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtg 31472881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 13927243 - 13927135
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13927243 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 13927144  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  13927143 cgccggcgg 13927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 13942439 - 13942331
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||  ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13942439 tttgaaatctggaattttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 13942340  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  13942339 cgccggcgg 13942331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 22918799 - 22918691
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||| ||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22918799 tttgaaatctggaaatttaggtcgccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 22918700  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  22918699 cgccggcgg 22918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 22931909 - 22931801
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||| ||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22931909 tttgaaatctggaaatttaggtcgccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 22931810  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  22931809 cgccggcgg 22931801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 34183741 - 34183647
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34183741 ttaggtcaccggaa-gttcatagtctcaccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 34183647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 32044179 - 32044284
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    ||||||||||||||||| |||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32044179 ttctggaaaattaggtcgccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 32044277  T
Q  272 cggtgag 278  Q
    |||||||    
T  32044278 cggtgag 32044284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 32059375 - 32059480
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    ||||||||||||||||| |||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32059375 ttctggaaaattaggtcgccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 32059473  T
Q  272 cggtgag 278  Q
    |||||||    
T  32059474 cggtgag 32059480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 10985725 - 10985822
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    |||||| |||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10985725 tttgaaatctggaaatttaggtcaccggaagttcataagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatc 10985822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 34281345 - 34281453
Alignment:
Q  166 tttgaattctggaaaatt-aggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcc 264  Q
    ||||| ||||||||| || |||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34281345 tttgagttctggaaatttcaggtcaccggag-gtgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtggcttcatcc 34281443  T
Q  265 tcaccggcgg 274  Q
    || |||||||    
T  34281444 tcgccggcgg 34281453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 16160210 - 16160278
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16160210 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 16160278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 16171111 - 16171179
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16171111 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 16171179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 27798235 - 27798303
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  27798235 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccgncgg 27798303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 27813324 - 27813392
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  27813324 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccgncgg 27813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 13819813 - 13819758
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttg 105  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||    
T  13819813 ttagtttcaaaaccgtacgaagatttt-ccgatctacgtcgtttcaagctgtgtttg 13819758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 10116621 - 10116588
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||| |||||||||||||    
T  10116621 tctcgccggagaagatgaagattccggcggacct 10116588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 17259172 - 17259205
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||| ||||||||||||||||||    
T  17259172 tctcgccggagaagacgaagtttccggcggacct 17259205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 13819655 - 13819627
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  13819655 ccggagaagatgaagtttccggcggacct 13819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 28274545 - 28274573
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  28274545 ccggagaagatgaagtttccggcggacct 28274573  T

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Target: scaffold0131 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 23990 - 24131
Alignment:
Q  140 gagacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggacctt 239  Q
    ||||||||||| |||||||| || ||||| | |||||| ||||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  23990 gagacgaatcgtttgatgtggaaatttttaagttctgggaaattagatcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggacctt 24089  T
Q  240 caaggtctccgccgttgcttcatcctcaccggcggtgagttt 281  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  24090 caaggtctccgccgtagcttcatcctcgccggcggtgagttt 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 291
Target Start/End: Complemental strand, 225711 - 225571
Alignment:
Q  150 gattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 249  Q
    ||||||||| ||| |||||||| |||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  225711 gattgatgtaaaaatttttgaaatctggaat-ttaggtcaccggaaagtgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctcc 225613  T
Q  250 gccgttgcttcatcctcaccggcggtgagttttaaagagagg 291  Q
    |||||  ||||||||||||||| |||||||| || |||||||    
T  225612 gccgtcacttcatcctcaccggtggtgagttctagagagagg 225571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 291
Target Start/End: Original strand, 681 - 807
Alignment:
Q  164 tttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    ||||||| ||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  681 tttttgagttctggaaa-ttaggtcaccggaaagttcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatc 779  T
Q  264 ctcaccggcggtgagttttaaagagagg 291  Q
    ||||||||||||||||| || |||||||    
T  780 ctcaccggcggtgagttctagagagagg 807  T

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Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 281
Target Start/End: Original strand, 27191930 - 27192158
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||| | |     
T  27191930 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaagcaaa 27192029  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     ||||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27192030 agatgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 27192128  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  27192129 cgtagcttcatcctcaccggcggtgagttt 27192158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 281
Target Start/End: Original strand, 27203783 - 27204011
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||| | |     
T  27203783 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaagcaaa 27203882  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     ||||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27203883 agatgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 27203981  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  27203982 cgtagcttcatcctcaccggcggtgagttt 27204011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 281
Target Start/End: Complemental strand, 27245448 - 27245220
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||| | |     
T  27245448 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaagcaaa 27245349  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     ||||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27245348 agatgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 27245250  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  27245249 cgtagcttcatcctcaccggcggtgagttt 27245220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 281
Target Start/End: Complemental strand, 27257311 - 27257083
Alignment:
Q  53 tttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgat 152  Q
    |||||||||||||| |||||||| | |||||||||||||||||| | ||||||  |||| |  |||   | ||||| ||||  | |   |||||| | |     
T  27257311 tttcaaaaccgtacaaagtttttccagatctacgtcgtttcaagctgtgtttgagaaaatctttgctggattcgtgtttagggttaaaggacgaagcaaa 27257212  T
Q  153 tgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 251  Q
     ||||| ||| | ||||||||||||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27257211 agatgtaaaaatctttgaattctggaaagttaggtcaccggaa-gttcataggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgc 27257113  T
Q  252 cgttgcttcatcctcaccggcggtgagttt 281  Q
    ||| ||||||||||||||||||||||||||    
T  27257112 cgtagcttcatcctcaccggcggtgagttt 27257083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 4767301 - 4767436
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttca 241  Q
    ||||||||  ||| ||||||| | ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  4767301 gacgaatcatttggtgtgaaactctttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttca 4767400  T
Q  242 aggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    ||||||||||||| ||||||||| | |||| |||||    
T  4767401 aggtctccgccgtagcttcatccactccggtggtga 4767436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 277
Target Start/End: Complemental strand, 4785862 - 4785727
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttca 241  Q
    ||||||||  ||| ||||||| | ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  4785862 gacgaatcatttggtgtgaaactctttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttca 4785763  T
Q  242 aggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    ||||||||||||| ||||||||| | |||| |||||    
T  4785762 aggtctccgccgtagcttcatccactccggtggtga 4785727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 16668490 - 16668598
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16668490 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 16668589  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  16668590 cgccggcgg 16668598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 27619898 - 27619803
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27619898 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27619803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 27635508 - 27635413
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27635508 ttaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 4753310 - 4753199
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  4753310 tttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcca 4753211  T
Q  266 caccggcggtga 277  Q
    | |||| |||||    
T  4753210 ctccggtggtga 4753199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 277
Target Start/End: Original strand, 4782482 - 4782593
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    ||||| |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  4782482 tttgagttctggaaaatttggtcaccggaaactgcttgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcca 4782581  T
Q  266 caccggcggtga 277  Q
    | |||| |||||    
T  4782582 ctccggtggtga 4782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 27002081 - 27002172
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27002081 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27002172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 27017587 - 27017678
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27017587 tcaccggaaactgctaggtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 27017678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 19901786 - 19901662
Alignment:
Q  165 ttttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcc 264  Q
    |||||| ||||||||| | |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  19901786 ttttgagttctggaaact-aggtcaccggaatgttcttagcctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcc 19901688  T
Q  265 tcaccggcggtgagttttaaagagag 290  Q
    ||| ||| |||||||| || ||||||    
T  19901687 tcatcggtggtgagttctagagagag 19901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 16683772 - 16683880
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  16683772 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggacctttaaggtctccgccgtagcttcatcct 16683871  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  16683872 cgccggcgg 16683880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26107041 - 26106933
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26107041 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26106942  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26106941 cgccggcgg 26106933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 26122273 - 26122165
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26122273 tttgaaatctggaaatttaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 26122174  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  26122173 cgccggcgg 26122165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 26912901 - 26913017
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||     
T  26912901 tctggaaatttaggtcaccggaaactgcatgatctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 26913000  T
Q  273 ggtgagttttaaagaga 289  Q
    |||||||| || |||||    
T  26913001 ggtgagttctagagaga 26913017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 26930188 - 26930304
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||     
T  26930188 tctggaaatttaggtcaccggaaactgcatgatctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 26930287  T
Q  273 ggtgagttttaaagaga 289  Q
    |||||||| || |||||    
T  26930288 ggtgagttctagagaga 26930304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 29495662 - 29495811
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29495662 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 29495759  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  29495760 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 29495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 29511000 - 29511149
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29511000 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 29511097  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  29511098 aaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 29511149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 27038769 - 27038863
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27038769 ttaggtcaccggaa-gttcgtagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 27038863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 27067108 - 27067202
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtga 277  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27067108 ttaggtcaccggaa-gttcgtagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcggtga 27067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 7986955 - 7987060
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  7986955 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 7987053  T
Q  272 cggtgag 278  Q
    |||||||    
T  7987054 cggtgag 7987060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 29567264 - 29567399
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29567264 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 29567361  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29567362 aaggtctccgccgtggcttcatcctcaccggcggtgag 29567399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 29582670 - 29582805
Alignment:
Q  142 gacgaatcgattgatgtgaaattttttgaattctggaaaattaggtcaccggaaagtgcttagt-ctcgccggagaagatgaagtttccggcggaccttc 240  Q
    ||||||||| ||||||| ||| | ||| | ||||||||| ||   |||||||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29582670 gacgaatcgtttgatgtaaaaatctttaagttctggaaatttt--tcaccggaaagtgcataggactcgccggagaagatgaagcttccggcggaccttc 29582767  T
Q  241 aaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29582768 aaggtctccgccgtggcttcatcctcaccggcggtgag 29582805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 30548573 - 30548468
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  30548573 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 30548475  T
Q  272 cggtgag 278  Q
    |||||||    
T  30548474 cggtgag 30548468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 30563843 - 30563738
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  30563843 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 30563745  T
Q  272 cggtgag 278  Q
    |||||||    
T  30563744 cggtgag 30563738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 29543828 - 29543920
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29543828 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 29543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 29559238 - 29559330
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29559238 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 29559330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 31545029 - 31545121
Alignment:
Q  187 tcaccggaaagtgcttag-tctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31545029 tcaccggaaagttcataggtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 31545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 26783467 - 26783553
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  26783467 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 26783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 26795440 - 26795526
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  26795440 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 26795526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 27479455 - 27479541
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  27479455 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 27479541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 27494709 - 27494795
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  27494709 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 27494795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 4453151 - 4453253
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| |||||||||||||||  || |   ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  4453151 tctggaaatttaggtcaccggaaaccgcatgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggc 4453250  T
Q  273 ggt 275  Q
    |||    
T  4453251 ggt 4453253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 28978034 - 28977932
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| |||||||||||||||  || |   ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  28978034 tctggaaatttaggtcaccggaaaccgcatgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggc 28977935  T
Q  273 ggt 275  Q
    |||    
T  28977934 ggt 28977932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 4519716 - 4519784
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4519716 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 4519784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 4534903 - 4534971
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4534903 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 4534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 2650750 - 2650663
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    |||||||||| |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  2650750 tcaccggaaactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcctcaccggcgg 2650663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 26501620 - 26501692
Alignment:
Q  79 gatctacgtcgtttcaagatttgtttgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcga 151  Q
    ||||||||||| |||||  ||| ||||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  26501620 gatctacgtcgattcaaactttatttgtgaaaaccagtgccaaaatcatgcttagaatagagagacgaatcga 26501692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 16997182 - 16997237
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttg 105  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||    
T  16997182 ttagtttcaaaaccgtacgaagatttt-ccgatctacgtcgtttcaagctgtgtttg 16997237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 27308256 - 27308201
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaagatttgtttg 105  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||    
T  27308256 ttagtttcaaaaccgtacgaagatttt-ccgatctacgtcgtttcaagctgtgtttg 27308201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 27212300 - 27212346
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaag 96  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27212300 ttagtttcaaaaccgtacgaag-attttccgatctacatcgtttcaag 27212346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 27236928 - 27236882
Alignment:
Q  49 ttagtttcaaaaccgtacgaagttttttccgatctacgtcgtttcaag 96  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27236928 ttagtttcaaaaccgtacgaag-attttccgatctacatcgtttcaag 27236882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 12964927 - 12964893
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacctt 239  Q
    |||||||||||||||||||| ||||||||||||||    
T  12964927 tctcgccggagaagatgaagattccggcggacctt 12964893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 8189498 - 8189442
Alignment:
Q  207 tcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatc 263  Q
    |||||||||||||||||| |||||||| |||  | |||| |||||||| ||||||||    
T  8189498 tcgccggagaagatgaagcttccggcgaaccacctaggtttccgccgtggcttcatc 8189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 16997340 - 16997368
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  16997340 ccggagaagatgaagtttccggcggacct 16997368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 20423522 - 20423562
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  20423522 tctcgccggagaagatgaagattctggcggacctttaaggt 20423562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 22925039 - 22924999
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  22925039 tctcgccggagaagatgaagattccggcgaaccttgaaggt 22924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 27212458 - 27212486
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  27212458 ccggagaagatgaagtttccggcggacct 27212486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 27236770 - 27236742
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  27236770 ccggagaagatgaagtttccggcggacct 27236742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 27308098 - 27308070
Alignment:
Q  210 ccggagaagatgaagtttccggcggacct 238  Q
    |||||||||||||||||||||||||||||    
T  27308098 ccggagaagatgaagtttccggcggacct 27308070  T

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Target: scaffold0161 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 28596 - 28480
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  28596 tctggaaatttaggtcaccggaaactgcataatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcgcttcatcctcaccggt 28497  T
Q  273 ggtgagttttaaagaga 289  Q
    |||||||| || |||||    
T  28496 ggtgagttctagagaga 28480  T

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Target: scaffold0184 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 24960 - 24869
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24960 tcaccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 24869  T

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Target: scaffold0078 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 47884 - 47975
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47884 tcaccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 47975  T

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Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 55884 - 55793
Alignment:
Q  187 tcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  55884 tcaccggaaagtgcataggctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 55793  T

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Target: scaffold1803 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1803
Description:

Target: scaffold1803; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 1179 - 1287
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| |||||   ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  1179 tttgaaatctggaaaattaggtcaccggaaactgcttgagctcgccggagaagatgaagattccggcggaccttcaaggtctccgccgtcacttcatcct 1278  T
Q  266 caccggcgg 274  Q
    |||||||||    
T  1279 caccggcgg 1287  T

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Target: scaffold0022 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 155201 - 155095
Alignment:
Q  173 tctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggc 272  Q
    |||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||     
T  155201 tctggaaatttaggtcaccggaaactgcatgatctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtcacttcatcctcaccggt 155102  T
Q  273 ggtgagt 279  Q
    |||||||    
T  155101 ggtgagt 155095  T

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Target: scaffold0350 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 13098 - 13004
Alignment:
Q  182 ttaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13098 ttaggtcaccgga--gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 13004  T

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Target: scaffold1179 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 1264 - 1156
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||||||||||||||||||| ||| |   |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1264 tttgaaatctggaaaattaggtcaccggaaactgcatgaactcgccggagaagatgaagtttccggcggacctttaaggtctccgccgtagcttcatcct 1165  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  1164 cgccggcgg 1156  T

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Target: scaffold0250 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 104 - 1
Alignment:
Q  172 ttctggaaaatt-aggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccg 270  Q
    ||||||||| || |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  104 ttctggaaatttcaggtcaccggaa-gttcatagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtggcttcatcctcaccg 6  T
Q  271 gcggt 275  Q
    |||||    
T  5 gcggt 1  T

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Target: scaffold0027 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 130234 - 130129
Alignment:
Q  172 ttctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccgg 271  Q
    |||||||||||||||||||||||  | | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  130234 ttctggaaaattaggtcaccggagtg-gtttaggcgcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccgg 130136  T
Q  272 cggtgag 278  Q
    |||||||    
T  130135 cggtgag 130129  T

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Target: scaffold0182 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 3470 - 3594
Alignment:
Q  154 gatgtgaaattttttgaattctggaaaatt-aggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgcc 252  Q
    ||||||||| | ||| | ||||||||| || |||||||||||  |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3470 gatgtgaaaatctttaagttctggaaatttcaggtcaccggag-gtgctaggtctcgccggagaagatgaagttttcggcggaccttcaaggtctccgcc 3568  T
Q  253 gttgcttcatcctcaccggcggtgag 278  Q
    || |||||||||||||||||||||||    
T  3569 gtagcttcatcctcaccggcggtgag 3594  T

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Target: scaffold1629 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 698 - 626
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  698 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 626  T

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Target: scaffold0289 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 16333 - 16241
Alignment:
Q  187 tcaccggaaagtgctta-gtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgag 278  Q
    |||||||||||| | || || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16333 tcaccggaaagttcatatgtttcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcaccggcggtgag 16241  T

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Target: scaffold0159 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 16527 - 16419
Alignment:
Q  166 tttgaattctggaaaattaggtcaccggaaagtgcttagtctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcct 265  Q
    |||||| |||||||| ||||||| ||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16527 tttgaaatctggaaatttaggtcgccggaaactgcatgaactcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcct 16428  T
Q  266 caccggcgg 274  Q
    | |||||||    
T  16427 cgccggcgg 16419  T

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Target: scaffold0603 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 114 - 28
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcggtgagttttaaagagaggc 292  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  114 ctcgccggagaagatgaagcttccggcggaccttcaaggtctccgccgtggcttcatcctcaccggcggtgagggttagagagaggc 28  T

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Target: scaffold1816 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 715 - 647
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  715 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 647  T

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Target: scaffold0336 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 2714 - 2782
Alignment:
Q  206 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgttgcttcatcctcaccggcgg 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2714 ctcgccggagaagatgaagtttccggcggaccttcaaggtctccgccgtagcttcatcctcgccggcgg 2782  T

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Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 19082 - 18997
Alignment:
Q  104 tgtaaaaaccagtgccaaaatcgtgcttagaataaggagacgaatcgattgatgtgaaattttttgaattctggaaaattaggtca 189  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||||  |||||| |||| |  ||||||||| ||||||||    
T  19082 tgtaaaaaccagtgccgaaatcatgcttagaataaagagacgaatcgattggagtgaaaattttaggtttctggaaatttaggtca 18997  T

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Target: scaffold0401 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 15099 - 15066
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||||||||||||||||||||||    
T  15099 tctcgccggagaagatgaagtttccggcggacct 15066  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 12143 - 12103
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  12143 tctcgccggagaagatgaagattccggcggaccttgaaggt 12103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 25502 - 25542
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcggaccttcaaggt 245  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  25502 tctcgccggagaagatgaagattccggcggaccttgaaggt 25542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 36865 - 36895
Alignment:
Q  205 tctcgccggagaagatgaagtttccggcgga 235  Q
    |||||||||||||||||||||||||||||||    
T  36865 tctcgccggagaagatgaagtttccggcgga 36895  T

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Target: scaffold0143 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 21753 - 21782
Alignment:
Q  209 gccggagaagatgaagtttccggcggacct 238  Q
    ||||||||||||||||||||||||||||||    
T  21753 gccggagaagatgaagtttccggcggacct 21782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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