View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16956_high_21 (Length: 260)
Name: NF16956_high_21
Description: NF16956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16956_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2343260 - 2343504
Alignment:
| Q |
1 |
atatgttgtgatgtgaccacaattatggttatatactacaatttaaaaccatgagtccaataataaagttttaaaggactctgtgatgacatcgcaatca |
100 |
Q |
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||||||||||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| || |
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| T |
2343260 |
atatgttgtgatgtgaccacaattatgtttacagactacaatttaaaaccatgactccaataataaagttttaaaggactctgtgatgacattgcaacca |
2343359 |
T |
|
| Q |
101 |
caattacagtcgcatggtttctaattgtaagtattttgtcacaataaagtttgtagcacgaccgcaactgcaatttaaaacacgaataaaatcgattacc |
200 |
Q |
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|||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
2343360 |
caatcacagtcgcatgggttctaattgtgagtattttgtcacaataaagtttgtagcacgaccgcaactgcaatttaaaacacgaataaaatcgattaac |
2343459 |
T |
|
| Q |
201 |
tttttatgatataaagagataaaagagagtatgagagatttacct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2343460 |
tttttatgatataaagagataaaagagagtatgagagatttacct |
2343504 |
T |
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