View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16956_high_26 (Length: 205)
Name: NF16956_high_26
Description: NF16956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16956_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8209745 - 8209573
Alignment:
| Q |
17 |
aaaatgttatagtaactttgtagtttgtttgttatctcaatttatcataatttattattatttcaaaagtttaatgagccgtttcctctaaaaaatatga |
116 |
Q |
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| T |
8209745 |
aaaatgttatagtaactttgtagtttgtttgttatctcaatttgtcataatttattattatttcaaaagtttaatgagccgtttcccctaaaaaataaga |
8209646 |
T |
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| Q |
117 |
aagaattttaatgagtccgttataatgttgcactcttcgcggcacaaataaaaaacgataccaacctctctct |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8209645 |
aagaattttaatgagtccgttataatgttgcactcttcgcggcacaaataaaaaacgataccaacctctctct |
8209573 |
T |
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