View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16959_low_5 (Length: 265)
Name: NF16959_low_5
Description: NF16959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16959_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 37666933 - 37667176
Alignment:
| Q |
1 |
actctcaaaactatcaaatctaataacggcctggtgctttctcttccaaaaatttatgcttctaaatgtatcattcgtnnnnnnnnnnnnnnnnnncatg |
100 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
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| T |
37666933 |
actcccaaaactatcaaatctaataacggcctggtgctttctcttccaaaaatttatgcttctaagtgtatcattcgtaaaaaaaataaaa-----catg |
37667027 |
T |
|
| Q |
101 |
tgtagaaacccca-cgacaaaatggtacaccaacaaattctcaatgtaggaagaaccattatatttcagtccaaattacctaagtcatttggatcatatg |
199 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37667028 |
tgtagaaaccccaacgacaaaatggtacaccaacaaattctcaatgtaggaagaaccattatatttcagtccaaattacctaagtcatttggatcatatg |
37667127 |
T |
|
| Q |
200 |
tttattaatgttgtgttcttaatcaatagagtcatcacacctctattgc |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37667128 |
tttattaatgttgtgttcttaatcaatagagtcatcacacctctattgc |
37667176 |
T |
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