View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1696-Insertion-5 (Length: 211)
Name: NF1696-Insertion-5
Description: NF1696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1696-Insertion-5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 6125476 - 6125679
Alignment:
| Q |
8 |
cccatttgttcatatgctctaaactctttcctatctcatctatttcacgagcaatttgtaaccgaaaaacaaatgcattaatgcaagaaaataaactgcg |
107 |
Q |
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| T |
6125476 |
cccatttgatcatatactctaaattctttcctatctcatctatttcacgagcaatttgtaactgaaaaacaaatgcattaatgcaagaaaataaactgcg |
6125575 |
T |
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| Q |
108 |
taccttcccaccatcaagacgcaaaatttcggtagcaatttcatcgaagaagtcatcagcagcataaacctgatcttttatctctcttatccaatccttg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6125576 |
taccttcccaccatcaagacgcaaaatttcggtagcaatttcatcgaagaagtcatcagcagcataaacctgatcttttatctctcttatccaatccttg |
6125675 |
T |
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| Q |
208 |
tcaa |
211 |
Q |
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|||| |
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| T |
6125676 |
tcaa |
6125679 |
T |
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