View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16960_low_7 (Length: 325)

Name: NF16960_low_7
Description: NF16960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16960_low_7
NF16960_low_7
[»] chr7 (21 HSPs)
chr7 (19-279)||(27508602-27508860)
chr7 (1-193)||(43257241-43257433)
chr7 (158-309)||(43257366-43257516)
chr7 (57-270)||(6441378-6441588)
chr7 (21-270)||(15000681-15000928)
chr7 (19-279)||(38760989-38761245)
chr7 (22-274)||(14197457-14197707)
chr7 (23-225)||(45012848-45013049)
chr7 (21-190)||(36150929-36151098)
chr7 (26-274)||(5080111-5080357)
chr7 (21-133)||(15272320-15272432)
chr7 (158-279)||(36150874-36150993)
chr7 (44-286)||(37787707-37787943)
chr7 (10-272)||(3404491-3404749)
chr7 (24-127)||(38761168-38761271)
chr7 (24-127)||(27508577-27508679)
chr7 (200-279)||(15272349-15272426)
chr7 (126-194)||(45012982-45013050)
chr7 (57-127)||(6441520-6441590)
chr7 (214-275)||(45013061-45013120)
chr7 (23-127)||(5080285-5080389)
[»] chr1 (11 HSPs)
chr1 (18-309)||(50335436-50335726)
chr1 (18-274)||(13735476-13735729)
chr1 (20-279)||(37607998-37608254)
chr1 (23-279)||(8097714-8097968)
chr1 (41-163)||(11633270-11633392)
chr1 (24-127)||(50335441-50335544)
chr1 (20-254)||(42847076-42847301)
chr1 (19-129)||(32373981-32374090)
chr1 (206-270)||(42847200-42847262)
chr1 (235-270)||(50335650-50335685)
chr1 (150-210)||(32374092-32374152)
[»] chr4 (49 HSPs)
chr4 (23-272)||(18830574-18830820)
chr4 (20-275)||(5448226-5448479)
chr4 (18-286)||(30470812-30471078)
chr4 (23-274)||(11821754-11822007)
chr4 (21-285)||(2634021-2634283)
chr4 (18-219)||(10757564-10757765)
chr4 (18-219)||(10970735-10970936)
chr4 (20-279)||(2063172-2063429)
chr4 (16-200)||(22017874-22018058)
chr4 (105-286)||(10380676-10380855)
chr4 (11-270)||(18836267-18836523)
chr4 (18-231)||(37694894-37695107)
chr4 (135-279)||(55382667-55382809)
chr4 (19-285)||(2232367-2232629)
chr4 (19-218)||(5324678-5324877)
chr4 (18-193)||(12140661-12140836)
chr4 (24-269)||(9826668-9826911)
chr4 (24-275)||(30378772-30379017)
chr4 (102-279)||(47943526-47943701)
chr4 (126-279)||(37695034-37695185)
chr4 (65-194)||(8951061-8951190)
chr4 (22-204)||(18500697-18500878)
chr4 (23-143)||(47463813-47463933)
chr4 (24-127)||(30470994-30471097)
chr4 (54-225)||(1387309-1387479)
chr4 (136-258)||(3370012-3370132)
chr4 (158-279)||(22017984-22018103)
chr4 (126-259)||(1387444-1387576)
chr4 (24-127)||(55382732-55382835)
chr4 (235-279)||(47463840-47463884)
chr4 (233-279)||(29908915-29908961)
chr4 (60-126)||(30378778-30378844)
chr4 (55-140)||(3391170-3391255)
chr4 (59-127)||(2232546-2232614)
chr4 (135-191)||(3370045-3370101)
chr4 (235-279)||(10757596-10757640)
chr4 (235-279)||(10970767-10970811)
chr4 (128-200)||(55382692-55382764)
chr4 (200-270)||(3391183-3391251)
chr4 (24-127)||(47943624-47943727)
chr4 (42-113)||(55382596-55382667)
chr4 (167-225)||(8951131-8951189)
chr4 (241-279)||(18836306-18836344)
chr4 (208-279)||(12140693-12140762)
chr4 (126-178)||(18500691-18500743)
chr4 (235-275)||(22017912-22017952)
chr4 (121-193)||(29908967-29909039)
chr4 (235-279)||(30470844-30470888)
chr4 (235-275)||(37694930-37694970)
[»] chr8 (29 HSPs)
chr8 (24-279)||(25149238-25149491)
chr8 (20-285)||(23976086-23976349)
chr8 (20-286)||(22469429-22469692)
chr8 (19-194)||(12106862-12107037)
chr8 (82-286)||(22326464-22326666)
chr8 (18-273)||(18324029-18324282)
chr8 (26-274)||(37543803-37544040)
chr8 (57-265)||(35202638-35202845)
chr8 (20-218)||(21124444-21124642)
chr8 (19-274)||(4288917-4289173)
chr8 (19-210)||(10289294-10289481)
chr8 (96-212)||(31253995-31254111)
chr8 (19-161)||(21185804-21185946)
chr8 (158-274)||(12106969-12107083)
chr8 (130-271)||(21124361-21124500)
chr8 (20-161)||(23625112-23625253)
chr8 (148-225)||(29585574-29585651)
chr8 (165-279)||(21184325-21184436)
chr8 (120-274)||(41358778-41358930)
chr8 (41-179)||(37494332-37494464)
chr8 (126-200)||(29585584-29585658)
chr8 (154-275)||(22426877-22426995)
chr8 (235-279)||(12106893-12106937)
chr8 (19-118)||(12107020-12107119)
chr8 (84-127)||(18324057-18324100)
chr8 (24-127)||(25149414-25149517)
chr8 (50-127)||(23976267-23976343)
chr8 (235-280)||(25149263-25149308)
chr8 (182-218)||(24609152-24609188)
[»] chr5 (28 HSPs)
chr5 (18-300)||(10760002-10760282)
chr5 (19-279)||(2555465-2555723)
chr5 (22-286)||(21943741-21944003)
chr5 (19-274)||(13753224-13753477)
chr5 (21-248)||(17497052-17497277)
chr5 (96-286)||(34419499-34419687)
chr5 (26-180)||(21211419-21211573)
chr5 (24-269)||(19491708-19491951)
chr5 (97-270)||(11297993-11298165)
chr5 (19-258)||(30100609-30100843)
chr5 (96-225)||(30852657-30852786)
chr5 (19-226)||(20429872-20430079)
chr5 (82-279)||(19564713-19564908)
chr5 (17-203)||(31912189-31912375)
chr5 (82-194)||(32539326-32539437)
chr5 (82-224)||(12895607-12895747)
chr5 (22-127)||(43548948-43549053)
chr5 (200-279)||(21943769-21943846)
chr5 (26-127)||(10760183-10760284)
chr5 (135-200)||(12895599-12895664)
chr5 (233-270)||(21211606-21211643)
chr5 (200-279)||(17497171-17497248)
chr5 (235-279)||(21211443-21211487)
chr5 (167-211)||(21211528-21211572)
chr5 (212-275)||(30100644-30100705)
chr5 (16-80)||(34419674-34419738)
chr5 (24-127)||(2555439-2555542)
chr5 (126-194)||(30852656-30852724)
[»] chr6 (15 HSPs)
chr6 (19-275)||(25089182-25089436)
chr6 (16-286)||(19295273-19295541)
chr6 (18-271)||(13536594-13536846)
chr6 (19-204)||(26705127-26705312)
chr6 (19-256)||(10672614-10672847)
chr6 (19-272)||(21222460-21222713)
chr6 (19-275)||(10587882-10588120)
chr6 (65-280)||(10862038-10862250)
chr6 (135-279)||(12651194-12651335)
chr6 (24-127)||(19295457-19295560)
chr6 (24-126)||(10862013-10862115)
chr6 (24-127)||(10588047-10588150)
chr6 (24-127)||(13536560-13536663)
chr6 (233-270)||(28752277-28752314)
chr6 (235-275)||(10587917-10587957)
[»] chr3 (41 HSPs)
chr3 (19-274)||(21514775-21515028)
chr3 (20-211)||(15031312-15031503)
chr3 (57-275)||(48755357-48755574)
chr3 (18-286)||(33343025-33343289)
chr3 (23-193)||(26498547-26498717)
chr3 (57-285)||(44967875-44968100)
chr3 (20-229)||(15005032-15005241)
chr3 (20-184)||(38498222-38498386)
chr3 (18-219)||(11989039-11989240)
chr3 (69-279)||(1426510-1426709)
chr3 (25-225)||(14434641-14434841)
chr3 (17-223)||(26920235-26920441)
chr3 (24-269)||(18445405-18445648)
chr3 (21-200)||(20759030-20759209)
chr3 (126-275)||(15031218-15031365)
chr3 (120-279)||(43562696-43562853)
chr3 (182-286)||(38498154-38498256)
chr3 (96-216)||(36383085-36383205)
chr3 (40-147)||(39541766-39541873)
chr3 (158-279)||(26498650-26498769)
chr3 (24-127)||(42453043-42453146)
chr3 (24-126)||(33343006-33343108)
chr3 (167-231)||(36383102-36383166)
chr3 (24-127)||(15031188-15031291)
chr3 (24-127)||(26498692-26498795)
chr3 (24-127)||(1426484-1426587)
chr3 (236-279)||(39541700-39541743)
chr3 (24-127)||(48755327-48755430)
chr3 (200-300)||(38498279-38498378)
chr3 (197-286)||(42453062-42453149)
chr3 (115-179)||(7300142-7300206)
chr3 (200-275)||(20759103-20759176)
chr3 (98-266)||(26840030-26840194)
chr3 (158-225)||(15031330-15031397)
chr3 (24-127)||(21514744-21514847)
chr3 (158-279)||(20758985-20759104)
chr3 (24-161)||(41984905-41985042)
chr3 (17-58)||(43562602-43562643)
chr3 (200-279)||(14434666-14434743)
chr3 (235-279)||(15031429-15031473)
chr3 (235-275)||(26498578-26498618)
[»] scaffold0407 (6 HSPs)
scaffold0407 (17-211)||(829-1022)
scaffold0407 (17-211)||(7293-7486)
scaffold0407 (126-280)||(969-1121)
scaffold0407 (126-280)||(7433-7585)
scaffold0407 (158-218)||(937-997)
scaffold0407 (158-218)||(7401-7461)
[»] chr2 (14 HSPs)
chr2 (18-200)||(32092753-32092935)
chr2 (18-275)||(22092890-22093145)
chr2 (102-257)||(39598585-39598738)
chr2 (18-279)||(24006874-24007133)
chr2 (104-270)||(31499430-31499594)
chr2 (102-309)||(31819910-31820115)
chr2 (167-270)||(32092870-32092971)
chr2 (138-227)||(8219215-8219304)
chr2 (76-193)||(17914083-17914200)
chr2 (164-247)||(17914063-17914144)
chr2 (84-127)||(39598683-39598726)
chr2 (57-127)||(32092903-32092973)
chr2 (235-279)||(32092785-32092829)
chr2 (23-69)||(31820179-31820225)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-266)||(190174-190418)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-279)||(23918-24172)
[»] scaffold0039 (1 HSPs)
scaffold0039 (21-180)||(27486-27645)
[»] scaffold0003 (1 HSPs)
scaffold0003 (104-257)||(314126-314277)
[»] scaffold0024 (1 HSPs)
scaffold0024 (24-269)||(127840-128083)
[»] scaffold1300 (3 HSPs)
scaffold1300 (24-201)||(1452-1629)
scaffold1300 (233-269)||(1393-1429)
scaffold1300 (182-218)||(1467-1503)
[»] scaffold0049 (1 HSPs)
scaffold0049 (30-174)||(59711-59855)
[»] scaffold0026 (1 HSPs)
scaffold0026 (82-269)||(57485-57670)
[»] scaffold0047 (2 HSPs)
scaffold0047 (19-200)||(11676-11855)
scaffold0047 (233-279)||(11778-11824)
[»] scaffold0066 (2 HSPs)
scaffold0066 (111-279)||(15391-15557)
scaffold0066 (24-127)||(15365-15468)
[»] scaffold0018 (3 HSPs)
scaffold0018 (67-177)||(72008-72118)
scaffold0018 (22-108)||(72106-72192)
scaffold0018 (233-273)||(71940-71980)


Alignment Details
Target: chr7 (Bit Score: 146; Significance: 7e-77; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 27508860 - 27508602
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| | ||| |||||||| |||| |||||||||||||||||| ||||    
T  27508860 ggggaattagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgtt 27508761  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
     |||||||||| ||| |||||||||||||| |||||||||||| ||| |||||||||||||  ||||| ||||||| ||||||||| ||||||| |||||    
T  27508760 agtcaatttcatggactaaagtgactaacggagtctacattcagggactaaattgactaacagagtctgcattcagggactaaattgactaacatagtct 27508661  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    | ||||| |||   |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27508660 acattcaggga--ctattttgcaatttatctgcattcagggactaaagtgatgactcattt 27508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 43257241 - 43257433
Alignment:
Q  1 ttaaatgcaattttaataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtcc 100  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||     
T  43257241 ttaaatgcaattttaacagaggaattagtcactttaatccctgaatggaaaatgaatagtcaccttagtccctgaatgcatagaaattgtaaaagagtct 43257340  T
Q  101 ctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattca 193  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||  |||||| |||||    
T  43257341 ctgaatgtagattttgttggtcaatttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattca 43257433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 43257366 - 43257516
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| ||||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  43257366 ttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattcaaggatt--attttgcaatttatctgcattcag 43257463  T
Q  258 ggattaaagtgacgactcattttttattc-gggattgaagtgaccgatctccc 309  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  43257464 ggattaaagtgacgactcattttctattcagggattgaagtgactgatctccc 43257516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 270
Target Start/End: Original strand, 6441378 - 6441588
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctac 156  Q
    |||||||  ||||||||| ||| |||||||||| |||| |||||||||||||||||| | || |||||||||| |||  ||||||||||||| |||||||    
T  6441378 tagtcactatagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactct-ttagtcaatttcaaggacaaaagtgactaacggagtctac 6441476  T
Q  157 attcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattca 256  Q
    ||| |  || |||||||||||||  ||||| ||||||| ||||||||| |||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  6441477 atttagagactaaattgactaacagagtctgcattcagggactaaattgactaacaaagtctacattcaggga--ttattttgcaatttatctgcattca 6441574  T
Q  257 gggattaaagtgac 270  Q
    | || |||||||||    
T  6441575 gagactaaagtgac 6441588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 15000928 - 15000681
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    |||||||| ||||||| || |||||||| |||||||||||||| ||||||  |||||| | || ||||| |||| ||||||| |||||||||||| ||||    
T  15000928 ggaattagccactttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagactttattgg 15000829  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctat 220  Q
    ||||||||||||| ||||||| | |||| |||||||||| | ||| ||||||||||| || ||||| ||||||  ||||||| | ||||||| | ||||     
T  15000828 tcaatttcagggactaaagtgtccaacggagtctacattaagggactaaattgactatcggagtcttcattcaaggactaaactgactaacataatctac 15000729  T
Q  221 attcaaggattttattttgcaatttatctgcattcagggattaaagtgac 270  Q
    ||||   ||   |||||||||||||||||||||||||||| |||||||||    
T  15000728 attc--tgagaatattttgcaatttatctgcattcagggactaaagtgac 15000681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 38760989 - 38761245
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||||| |||| || |||||||| |||  ||||||||| ||||| | || ||||| |||||||| |||| ||||| || ||||||||| ||||    
T  38760989 ggggaattagtca-tttagtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagtcc-tggatgtagactctgtt 38761086  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    | |||||||  |||| |||||||||||||  ||||| |||||| ||| |||||||||||||  ||||| |||||   ||||||||| | |||||||||||    
T  38761087 gatcaatttttgggactaaagtgactaacagagtctgcattcagggactaaattgactaacagagtctgcattcgaggactaaattgattaacaaagtct 38761186  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    | ||||| |||   |||||||||||||||||||||||||||| |||||||| |||||||||    
T  38761187 acattcaggga--ctattttgcaatttatctgcattcagggactaaagtgatgactcattt 38761245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 274
Target Start/End: Original strand, 14197457 - 14197707
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggt 121  Q
    |||||| |||||||| |  || ||||| |||  ||||||||| |||||||||  ||| | |||||||| |||| ||||   ||||||||| | |||||||    
T  14197457 gaattaatcactttagttcctcaatgggaaaaaagtagtcactttagtccctaaatgcagagaaattgcaaaacagtcatcgaatgtagattctgttggt 14197556  T
Q  122 caatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctata 221  Q
    |||||||||||| |||||||||||||| |||||||||| |  || |||||||||||||| ||||| ||||||| || |||||| ||||||| |||||| |    
T  14197557 caatttcagggactaaagtgactaacggagtctacattgagagactaaattgactaacggagtctgcattcagggattaaattgactaacagagtctaca 14197656  T
Q  222 ttcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    |||| |||   ||| |||||||||||||||||||||||  |||| ||||||||    
T  14197657 ttcaggga--ctatattgcaatttatctgcattcaggggctaaaatgacgact 14197707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 45012848 - 45013049
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||  || |||||||| ||| |||||||||| |||||| ||| ||| |||||||||| |||| | || |  |||||||||| | ||||||    
T  45012848 aattagtcactttggtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaacaatctca-aatgtagactctattggtc 45012946  T
Q  123 aatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatat 222  Q
    ||||||||||| |||||||| || || ||||||||||||  ||||||||||||||||| ||||| ||||||| ||||||||| ||||||||| |||| ||    
T  45012947 aatttcagggactaaagtgattagcggagtctacattcagagattaaattgactaacggagtctgcattcagggactaaattgactaacaaactctacat 45013046  T
Q  223 tca 225  Q
    |||    
T  45013047 tca 45013049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 36151098 - 36150929
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    |||||||||||||||| || ||| ||||||||||||||||||| ||| ||| || ||||  |||||||| |||| ||| |||||||||||||||||||||    
T  36151098 ggaattagtcactttagtccctggatggaaaatgagtagtcactttaatccttgaatgttgagaaattgcaaaacagtacctgaatgtagactttgttgg 36150999  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacat 190  Q
    ||||||||| ||| |||| ||||||||| ||| ||||||||  || |||||||||||||  |||||||||    
T  36150998 tcaatttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaacagagtctacat 36150929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 274
Target Start/End: Original strand, 5080111 - 5080357
Alignment:
Q  26 tagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaat 125  Q
    ||||||||||| || |||||||| |||  ||||||||| ||||| |||| ||| | ||||| || |||| ||||  |||||||||||| |||| ||||||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaat 5080210  T
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||| ||| |||| ||| ||||| |||||||||||| | | |||||||| ||||| ||||| ||||||| ||||||||| ||||| | ||| || |||||    
T  5080211 ttcaaggactaaaatgattaacggagtctacattcaggtactaaattgattaacggagtctgcattcagggactaaattgactaatatagtttacattca 5080310  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
      ||   |||||| ||||||||||||||||||||| |||| | ||||||    
T  5080311 --gagactattttacaatttatctgcattcagggactaaaataacgact 5080357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 15272320 - 15272432
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    ||||| |||||||||| ||  ||||||  |||||||||||||  |||||||||| ||| | |||||||| |||| |||||||||||||||||||||||||    
T  15272320 ggaatgagtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttgg 15272419  T
Q  121 tcaatttcaggga 133  Q
    |||||||||||||    
T  15272420 tcaatttcaggga 15272432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 279
Target Start/End: Complemental strand, 36150993 - 36150874
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||| ||  | |||||  |||||||||||||||||||||||     
T  36150993 ttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaacagagtctacatctagggatt--attttgcaatttatctgcattcat 36150896  T
Q  258 ggattaaagtgacgactcattt 279  Q
    ||||| ||||||||||||||||    
T  36150895 ggatttaagtgacgactcattt 36150874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 286
Target Start/End: Original strand, 37787707 - 37787943
Alignment:
Q  44 aatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgac 143  Q
    ||||||||| |||||||| | |||||||||| ||  |   | ||||||||| |||| |||||| || | |||||| |||||||| |  || |||| ||||    
T  37787707 aatggaaaaagagtagtccctttagtccctgaatacaggaagattgtaaaacagtctctgaatataaattttgtttgtcaattttaaagattaaaatgac 37787806  T
Q  144 taacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaat 243  Q
    || || ||||||||||||  || |||||||||||||  ||| | ||||||| ||||||||| |||||||||||||| |||||  ||   |||||||||||    
T  37787807 tagcggagtctacattcaacgactaaattgactaacagagtatgcattcagggactaaattgactaacaaagtctacattca--ga-actattttgcaat 37787903  T
Q  244 ttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    ||   |||||||||||| ||||||| ||| |||||| ||||||    
T  37787904 tt---tgcattcagggactaaagtggcgattcatttcttattc 37787943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 272
Target Start/End: Complemental strand, 3404749 - 3404491
Alignment:
Q  10 attttaataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgta 109  Q
    |||||||  |||| ||||||||||||| |  || ||||||||| |||||||||| |||| ||||| ||| | |||||||| |||| ||||| ||||||||    
T  3404749 attttaaatggggtattagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgta 3404650  T
Q  110 gactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaacta 209  Q
    ||||  ||| |||||| ||||  | |||||||||||| | |  ||||| ||| ||| |||||||||||||  || || |||| || ||||||||| ||||    
T  3404649 gactcggttagtcaatatcagaaactaaagtgactaatgga-actacactcagggactaaattgactaacagag-ctgcatttagggactaaattgacta 3404552  T
Q  210 acaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacga 272  Q
    ||| ||| || ||||| |||   || |||||||||||||||| || ||| | |||| ||||||    
T  3404551 acagagtgtacattcatgga--ctactttgcaatttatctgcgtttaggtactaaaatgacga 3404491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 38761271 - 38761168
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||| |||||||| || |||||| | ||||||||  |||| |||||||||| ||| | | |||||| |||| |||||||||||||||||||||||  |||    
T  38761271 attaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgttaatca 38761172  T
Q  124 attt 127  Q
    ||||    
T  38761171 attt 38761168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 27508577 - 27508679
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||| | || |||||| | ||||||||  |||| |||||||||| ||| | | |||||| |||| |||||||||||||||||| |||| ||||    
T  27508577 attagtcactt-agtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtca 27508675  T
Q  124 attt 127  Q
    ||||    
T  27508676 attt 27508679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 15272426 - 15272349
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||| || ||||||||||| ||||| ||| |  |||||||||||| |||||||||||||| |||| |||| ||||||||    
T  15272426 aaattgaccaacaaagtctacattcagggact--attttgcaatttctctgcattcagggactaaaatgactactcattt 15272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 45012982 - 45013050
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcag 194  Q
    ||||| || |||| ||||||||| ||||| |||||| ||| ||||||||||||| || |||||||||||    
T  45012982 ttcagagattaaattgactaacggagtctgcattcagggactaaattgactaacaaactctacattcag 45013050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 6441590 - 6441520
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    ||||||| |||||| ||| ||| | | |||||| |||| | ||||||||||||||||||||| ||||||||    
T  6441590 tagtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaattt 6441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 45013061 - 45013120
Alignment:
Q  214 agtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    |||||||||||||||| |  |||||||||||||| |||||||| ||| |||| |||||||||    
T  45013061 agtctatattcaaggact--attttgcaatttatttgcattcaaggactaaactgacgactc 45013120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5080389 - 5080285
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||| ||||||||| | |||  ||| || |  |||||||||| ||| | | ||||||||||| |||| ||||||||| ||| | || |||    
T  5080389 aattagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatattagtc 5080290  T
Q  123 aattt 127  Q
    |||||    
T  5080289 aattt 5080285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 309
Target Start/End: Complemental strand, 50335726 - 50335436
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| || | ||||||||||  ||||||||| ||| |||||| ||| | | |||||| |||| |||||||||||||||||| |||    
T  50335726 aggggaattagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgt 50335627  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||| ||||| |||||||| || || |||||||||||| ||| ||||||||| |||| ||||| ||||||| ||||||||| ||||||||||||    
T  50335626 tggtcaattttagggactaaagtgattagcggagtctacattcagggactaaattgacgaacggagtctgcattcagggactaaattgactaacaaagtc 50335527  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc-gggattgaagtgaccgatctccc 309  Q
    || ||||| |||   |||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||| |||||||  |||||||    
T  50335526 tacattcatgga--ctattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgactaatctccc 50335436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 13735729 - 13735476
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||| ||||||||||||| ||  | ||||| ||| |||||||||  |||||| ||| ||| |||||||||| |||| |||||||||||||||||| |||    
T  13735729 aggggtattagtcactttagtca-taaatgggaaaggagtagtcat-ttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgt 13735632  T
Q  118 tgg-tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagt 216  Q
    | | ||||||||||||| |||||||||||||| |||||||||| || || |||||||||||||| ||||| ||||||||||||||||| ||||||| |||    
T  13735631 ttgatcaatttcagggactaaagtgactaacggagtctacatttattgactaaattgactaacggagtctgcattcagagactaaattgactaacagagt 13735532  T
Q  217 ctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    ||| |||   |||   ||||||| |||||||||||||||||||| |||||||||||||    
T  13735531 ctacattgtggga--ctattttgtaatttatctgcattcagggactaaagtgacgact 13735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 279
Target Start/End: Complemental strand, 37608254 - 37607998
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    |||| |||||||||||| ||  ||||||| ||| |||||||||  |||||||||| ||| | |||||||| |||| |||||||||||||| |  | ||||    
T  37608254 gggagttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaaact-gttg 37608156  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    ||||||||||||||  ||||||||||||| |||||||||||| ||| |||||||||||||  ||||| ||||||  ||||||||| ||||||| ||||||    
T  37608155 gtcaatttcagggaccaaagtgactaacggagtctacattcaaggactaaattgactaacagagtctgcattcaaggactaaattgactaacagagtcta 37608056  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
     |||||||||   ||||||||||||||| |||||||||||| |||| |||| | ||||||    
T  37608055 cattcaagga--ctattttgcaatttatatgcattcagggactaaaatgacaattcattt 37607998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 279
Target Start/End: Original strand, 8097714 - 8097968
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||| ||||||||||  |||| ||||| ||| |||||  ||  ||| | |||||||| |||| |||| || ||| |||||| ||||||||    
T  8097714 aattagtcactttagtctctgaatgagaaattagtagccactttagtttctaaatgcagagaaattgcaaaacagtctctaaatatagactatgttggtc 8097813  T
Q  123 aatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatat 222  Q
    ||||| | ||| |||| ||||||||  |||||||||||| | | |||||||||||| | ||| |  |||||  ||||||||| ||||||| | |||||||    
T  8097814 aattttaaggactaaaatgactaacagagtctacattcaggaactaaattgactaatggagtatgtattcaaggactaaattgactaacagaatctatat 8097913  T
Q  223 tcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||| |||   |||||||  ||||||||||||||||||| ||||||||  ||||||||    
T  8097914 tcatgga--ctattttgtgatttatctgcattcagggactaaagtgaaaactcattt 8097968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 11633392 - 11633270
Alignment:
Q  41 ctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagt 140  Q
    ||||||||||||||||||||||  ||||| |||| ||||| |||||||||| || ||||||| |||| ||||| | ||||||||||||| ||| ||||||    
T  11633392 ctgaatggaaaatgagtagtcattttagttcctgaatgtagagaaattgtataacagtccctaaatgcagactctattggtcaatttcaaggactaaagt 11633293  T
Q  141 gactaacgaagtctacattcatg 163  Q
    |||||||  | ||||||||||||    
T  11633292 gactaacataatctacattcatg 11633270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 50335441 - 50335544
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||||||||||||||| |||||| | |||||||| ||||| |||||||||| ||| | | |||||| |||| ||||| ||||||||||||||||| ||||    
T  50335441 attagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgttagtca 50335540  T
Q  124 attt 127  Q
    ||||    
T  50335541 attt 50335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 42847301 - 42847076
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| |||||| || | |||  ||||||||| ||| |||||| ||| | |||||||| |||| | ||| |||||||||||||||||     
T  42847301 gggaattagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgtta 42847202  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaacta--acaaagtc 217  Q
    |||| ||||        || ||||||||  |||||||||| ||||| |||||||||||||| ||| | |||||||| |||||||| ||||  | | | ||    
T  42847201 gtcagtttc--------aattgactaacagagtctacatttatggactaaattgactaacg-agtttgcattcagatactaaattgactatcatataatc 42847111  T
Q  218 tatattcaaggattttattttgcaatttatctgcatt 254  Q
    || |||||| ||  ||||||| |||||||||||||||    
T  42847110 tacattcaaaga--ttatttttcaatttatctgcatt 42847076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 32373981 - 32374090
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||||| |||| || |||||| | ||| |||||||||| |||||||||||||| | |||| ||| |||| ||| | |||||||||||| ||||    
T  32373981 ggggaattagtcattttagtccctgaataggaaa-gagtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgtt 32374079  T
Q  119 ggtcaatttca 129  Q
     ||||||||||    
T  32374080 agtcaatttca 32374090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 42847200 - 42847262
Alignment:
Q  206 actaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgac 270  Q
    |||||||||||||| ||||||||||| |  |||||||||| |||||||||||||| |||||||||    
T  42847200 actaacaaagtctacattcaaggattgt--tttgcaatttctctgcattcagggaataaagtgac 42847262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 50335650 - 50335685
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgac 270  Q
    ||||||||||| ||||||||||||||||||||||||    
T  50335650 ttttgcaatttgtctgcattcagggattaaagtgac 50335685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 32374092 - 32374152
Alignment:
Q  150 agtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaa 210  Q
    |||||||||||| ||| |||||||||||||  ||| | ||||||| ||||||||| |||||    
T  32374092 agtctacattcagggactaaattgactaacagagtttgcattcagggactaaattgactaa 32374152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 23 - 272
Target Start/End: Original strand, 18830574 - 18830820
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||| || |||||||  |||||||||||||| ||||||| |||||| | | ||||||  ||| |||||||||||||||| | ||||||||    
T  18830574 aattagtcactttagtccctgaatgagaaatgagtagtcactttagtcc-tggatgcagataaattgctaaacagtccctgaatgtagattctgttggtc 18830672  T
Q  123 aatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatat 222  Q
    ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||  ||||||| | |||| ||    
T  18830673 aatttcagggactaaagtgactaatggagtctacattcagggactaaattgactaacgaagtctgcattcagggactaaatggactaacagaatctacat 18830772  T
Q  223 tcaaggattttattttgcaatttatctgcattcagggattaaagtgacga 272  Q
    |||||||   |||||||||||||||||||||||||||| |||||||||||    
T  18830773 tcaagga--ctattttgcaatttatctgcattcagggactaaagtgacga 18830820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 275
Target Start/End: Complemental strand, 5448479 - 5448226
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| ||  ||||| ||||| || ||||||| |||||||||| ||| | |||||||| |||| |||||||||||||| ||| |||||    
T  5448479 gggaattagtcactttactccgtgaatcgaaaaagaatagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttg 5448380  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||||||| | |||||||||||| |||||||| ||||| ||| ||||||||| |||| ||||| ||| ||| ||||||||| ||||||| ||| ||    
T  5448379 gtcaatttcaggaactaaagtgactaatgaagtctatattcagggactaaattgaccaacggagtctgcatccagggactaaattgactaacagagttta 5448280  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
     ||||| ||    |||||| ||||||||||||||||||||| |||| ||| |||||    
T  5448279 cattcaggg--gctattttacaatttatctgcattcagggactaaaatgatgactc 5448226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 30470812 - 30471078
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||| ||| ||||| |  ||||| || |||||||||||||| ||||| |||| ||| | |||||||| |||| | ||||| |||||||  |||||    
T  30470812 aggggaattggtctctttagttcctgaacgggaaatgagtagtcactttagttcctgaatgcagagaaattgcaaaacactccctaaatgtagcatttgt 30470911  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||||||||| |||||||||||||  ||||||||||||  || |||||||| ||||| ||||| ||||||| ||||||||| | ||||| ||||    
T  30470912 tggtcaatttcagggactaaagtgactaacagagtctacattcaatgactaaattgattaacggagtctgcattcagggactaaattgattaacatagtc 30471011  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    || ||||| |||   |||||| |||||||||| |||||||| | |||||||||||||| |||| |||||    
T  30471012 tacattcaggga--ctattttacaatttatctacattcaggaactaaagtgacgactctttttctattc 30471078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 11822007 - 11821754
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtcc----ctgaatgtagactttgtt 118  Q
    ||||||| |||||| ||  | ||||| ||||||||| | || |||||||||| ||| | |||||||| |||| | ||     |||||| |||||||||||    
T  11822007 aattagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaacaatcaatctctgaatttagactttgtt 11821908  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||| |||||||||||||  ||||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||||||||| |||||    
T  11821907 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacgaaatctgcattcagggactaaattaactaacagagtct 11821808  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    | |||||| ||   |||||||||||||||||| ||| | ||| |||||||||||||    
T  11821807 acattcaaaga--ctattttgcaatttatctgtatttaaggactaaagtgacgact 11821754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 2634021 - 2634283
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    |||||||||||||||| ||  ||||||  ||| |||||||||| |||| | | | |||   |||||||| |||| |||||||||||||||||||| ||||    
T  2634021 ggaattagtcactttagtccatgaatgagaaaagagtagtcactttagccgccgaatgctgagaaattgcaaaacagtccctgaatgtagactttattgg 2634120  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctat 220  Q
    |||||||||| || |||||||| |||| ||||||||||||| ||| ||||||||| |||  ||||| ||||||| ||||||||| ||||||| ||||||     
T  2634121 tcaatttcagcgactaaagtgattaacaaagtctacattcagggactaaattgacgaacagagtctgcattcagggactaaattgactaacagagtctac 2634220  T
Q  221 attcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttatt 285  Q
    |||||  ||   ||||| ||||||||||| ||||||| || |||||||| ||||||||| |||||    
T  2634221 attca--gagactatttagcaatttatctacattcagtgactaaagtgaagactcatttcttatt 2634283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 10757564 - 10757765
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| || |||||||  |||||||||||||| |||||||||| ||||| | |||||| |||| ||||| || ||||||||| |||    
T  10757564 aggggaattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgt 10757663  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||| ||||||| || ||||| ||||  |||||||||||| ||| |||||||||||||| ||||| ||||||| |||||||||  |||||| ||||    
T  10757664 tggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtc 10757763  T
Q  218 ta 219  Q
    ||    
T  10757764 ta 10757765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 10970735 - 10970936
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| || |||||||  |||||||||||||| |||||||||| ||||| | |||||| |||| ||||| || ||||||||| |||    
T  10970735 aggggaattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgt 10970834  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||| ||||||| || ||||| ||||  |||||||||||| ||| |||||||||||||| ||||| ||||||| |||||||||  |||||| ||||    
T  10970835 tggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtc 10970934  T
Q  218 ta 219  Q
    ||    
T  10970935 ta 10970936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 279
Target Start/End: Complemental strand, 2063429 - 2063172
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| ||  ||||||| |||||||||||||| ||| ||| ||  || | |||||||| |||  |||||||||||||||||| |||||    
T  2063429 gggaattagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttg 2063330  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||| |  || ||||||||||||| || |||||||| | ||| |||||||||||||| ||| | ||||||||||||||||| ||||||| ||| ||    
T  2063329 gtcaattttaaagactaaagtgactaacaaattctacatttagggactaaattgactaacggagtttgcattcagagactaaattgactaacatagttta 2063230  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
     |||||| ||   ||||||  |||||||||||||||| | |  |||||| ||||||||||    
T  2063229 cattcaatga--ctattttataatttatctgcattcaagaaccaaagtgccgactcattt 2063172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 22017874 - 22018058
Alignment:
Q  16 ataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagacttt 115  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||||| |||||||||| ||| | |||||||| |||| |||||||||||||| | | |    
T  22017874 ataggggaatcagtcactttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattct 22017973  T
Q  116 gttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    |||||||||||||| ||| |||||||| ||||| ||| ||||||||  || ||||| |||||||  ||||||||||||| |||||    
T  22017974 gttggtcaatttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggacta 22018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 105 - 286
Target Start/End: Original strand, 10380676 - 10380855
Alignment:
Q  105 atgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaatt 204  Q
    ||||| ||||||||||||||||||||||| |||||||||||||  |||||||||| | ||| |||||||||||||||||||| ||||||| || ||||||    
T  10380676 atgtaaactttgttggtcaatttcagggactaaagtgactaactgagtctacatttagggactaaattgactaacgaagtctgcattcagggattaaatt 10380775  T
Q  205 aactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
     ||||||| |||||| ||| |  ||   |||||||||||||||||| ||||||||  |||||| |||||| ||||| |||||    
T  10380776 gactaacagagtctacattta--gagactattttgcaatttatctgaattcaggggctaaagttacgacttattttctattc 10380855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 270
Target Start/End: Original strand, 18836267 - 18836523
Alignment:
Q  11 ttttaataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtag 110  Q
    ||||| |||| |||||||||| |||  || |||||||  |||||||||||||| |||||||||| ||| | | |||||  |||| ||||||| |||||      
T  18836267 ttttagtaggagaattagtcatttttgtccctgaatgagaaatgagtagtcactttagtccctgaatgcagataaattc-aaaacagtccctaaatgtta 18836365  T
Q  111 actttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaa 210  Q
    ||  ||||||||||||| | ||| |||||||||||| | |||||||||||| ||| |||| ||||||||| ||||| ||||||| ||||||||  |||||    
T  18836366 acgctgttggtcaattttatggactaaagtgactaatggagtctacattcagggactaaa-tgactaacggagtctgcattcagggactaaatggactaa 18836464  T
Q  211 caaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgac 270  Q
    || ||||||  |||| ||| ||  ||||||||||| |||||||||||||| |||||||||    
T  18836465 cagagtctacgttcaggga-ttacttttgcaatttttctgcattcagggactaaagtgac 18836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 37694894 - 37695107
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| || |||| ||  ||  |||||||||| |||||||||| ||| | |||||||| |||| |||||||||||||||| | |||    
T  37694894 aggggaattagtcactttagtcactgagtgagaatggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgt 37694993  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||| || || ||||||||||||   |||||| ||||| ||| ||||||||||||||  |||| |||| || || |||||| ||||||| ||||    
T  37694994 tggtcaatttaagtgactaaagtgactaatagagtctatattcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtc 37695093  T
Q  218 tatattcaaggatt 231  Q
    |  |||||| ||||    
T  37695094 tgcattcaacgatt 37695107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 279
Target Start/End: Original strand, 55382667 - 55382809
Alignment:
Q  135 taaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggatttta 234  Q
    |||||||||||||| ||||||||| || ||| |||||||||||||| | ||| |||| || ||| ||||| |||||||||||||| |||||  ||   ||    
T  55382667 taaagtgactaacggagtctacatccagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattca--gagacta 55382764  T
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55382765 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 55382809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 2232367 - 2232629
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| |  || |||| ||||||||||||||  |||||||||| ||  | |||||||| |||| | ||||| |||||||| | ||||    
T  2232367 ggggaattagtcactttagttcctaaatgaaaaatgagtagtcaatttagtccctgaatagagagaaattgcaaaacaatccctcaatgtagattctgtt 2232466  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||| |||||||| |||  ||||||||||||| ||| ||||||| |||||  ||||| ||  ||| || |||||| ||||||| |||||    
T  2232467 ggtcaatttcagggactaaagtgattaa-aaagtctacattcagggactaaattggctaacagagtct-caaccagggattaaattgactaacatagtct 2232564  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttatt 285  Q
    | ||| |||||   |||||| |||||||| | |||| ||||| ||||||||||| || ||| |||||    
T  2232565 acattgaagga--ctattttacaatttatttacatttagggactaaagtgacgattcctttcttatt 2232629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 5324678 - 5324877
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||| |||||||||||| || |||||||  ||| |||||||| | |||| | ||||||| | |||||||| |||| ||||  |||||||||||| ||||    
T  5324678 ggggagttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgtt 5324777  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||| ||||||||| |||  ||| |||||||| ||| |||||||||||||  ||||| ||||||   |||||||| ||||||| |||||    
T  5324778 ggtcaatttcagggactaaagtgacgaacagagtttacattcaaggactaaattgactaacagagtctgcattcatgaactaaattgactaacagagtct 5324877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 12140661 - 12140836
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||||||  | ||||  |||| ||| ||||| ||| ||| || ||| |||||||||| |||| ||||||| ||| ||||||||||    
T  12140661 aggggaattagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgt 12140760  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattca 193  Q
    |  ||||||| ||||| |||| |||||||| || |||||||||| ||| |||||||||||||| ||||||||||||    
T  12140761 taatcaattttagggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 9826911 - 9826668
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  ||||||   ||| |||||||||| | ||| | || ||| | |||||||| |||| ||| | |||| ||||||| |||| ||||    
T  9826911 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 9826812  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||| ||| ||| |||||||||  |||||| ||||| |||||||||||| ||||||||||| |||||||| ||||| || ||||||| ||| || |||    
T  9826811 atttcaaggattaatgtgactaactgagtctaaattcagggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 9826712  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtga 269  Q
    ||  ||   |||||||||||||||||||||||| ||| ||||||||    
T  9826711 ca--gaaactattttgcaatttatctgcattcatggactaaagtga 9826668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 275
Target Start/End: Complemental strand, 30379017 - 30378772
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||||| ||| | |||||||||||||| |||||||||  ||| | |||||||| |||  |||| ||||||| |||||   |||||||    
T  30379017 attagtcactttagtctctaaataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaagaagtctctgaatgcagact---ttggtca 30378921  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||||  | |||||||||||||| |||||| ||||| ||| | |||||||||||  ||||| |||||||||||| |||| ||||||| |||||  |||    
T  30378920 atttcagacactaaagtgactaacggagtcta-attcagggactgaattgactaacagagtctgcattcagagactgaattgactaacagagtctgcatt 30378822  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||  ||   ||||||||||||||| | ||| |||||| |||||||| |||||    
T  30378821 ca--gagactattttgcaatttatttacatccagggactaaagtgatgactc 30378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 279
Target Start/End: Original strand, 47943526 - 47943701
Alignment:
Q  102 tgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaa 201  Q
    |||||||||| ||||||||||||||| ||||| || ||||| ||||  |||||||||||| ||||||||||||||||||    || ||||||   |||||    
T  47943526 tgaatgtagattttgttggtcaattttagggactatagtgattaacatagtctacattcagggattaaattgactaacggttcctgcattcaagaactaa 47943625  T
Q  202 attaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||| |||||| ||||||| ||||| |||   |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  47943626 attgactaaccaagtctacattcaggga--ctattttgcaatttatctgcatttaaggactaaagtgacgactcattt 47943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 279
Target Start/End: Original strand, 37695034 - 37695185
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||||||| |||| |||||||||  |||| |||| | |||||||||||||||||  ||||| ||||||  || |||||| ||||||| |||||| |||||    
T  37695034 ttcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtctgcattcaacgattaaattgactaacagagtctacattca 37695133  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
      ||  ||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  37695134 --gagattattttgcaatttatctgcattcaaggactaaagtgatgactcattt 37695185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 194
Target Start/End: Original strand, 8951061 - 8951190
Alignment:
Q  65 ttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatgg 164  Q
    |||||||||| |||||||||||||| |||| ||||  ||||||||||||  |||||||||||| ||  | |||| |||||||||||||||||||| | |     
T  8951061 ttagtccctgaatgtaaagaaattgcaaaacagtctttgaatgtagactcagttggtcaatttaagaaactaaaatgactaacgaagtctacattaagga 8951160  T
Q  165 attaaattgactaacgaagtctacattcag 194  Q
    | ||||||||||||| || |||||||||||    
T  8951161 actaaattgactaacaaaatctacattcag 8951190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 18500878 - 18500697
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggt 121  Q
    ||||||||||||||  || |||| || ||||||||||||||  ||| | | ||| || | ||||||||||||| ||| | ||||||||||   |||||||    
T  18500878 gaattagtcacttttgtccctga-tgaaaaatgagtagtcattttaattcttgggtgcagagaaattgtaaaacagttcttgaatgtagatactgttggt 18500780  T
Q  122 caatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaatt 204  Q
    ||||||||| || |||||||| ||||  |||||| ||||| ||| |||||||||||||  ||||||||||||| || ||||||    
T  18500779 caatttcagagactaaagtgattaacagagtctaaattcagggactaaattgactaacagagtctacattcagggattaaatt 18500697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 47463813 - 47463933
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||| || ||| |||| |||||||||||||| |||||||||| ||| | | |||||| |||| ||||  |||||||||||| ||||| |     
T  47463813 aattagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgttgata 47463912  T
Q  123 aatttcagggagtaaagtgac 143  Q
    ||||||||||| |||||||||    
T  47463913 aatttcagggactaaagtgac 47463933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 30471097 - 30470994
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||||||||| ||||| |||| ||||| ||||| |||| ||||| | ||||||||||| |||||||||||||||||| ||||  |||    
T  30471097 attagtcactttagtctctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgttaatca 30470998  T
Q  124 attt 127  Q
    ||||    
T  30470997 attt 30470994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 1387309 - 1387479
Alignment:
Q  54 gagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtc 153  Q
    |||||||||  ||||||| || ||| | |||||||  |||  ||||| |||||||| | |||||| |||||| | ||||| |||||||||||||||||||    
T  1387309 gagtagtcattttagtccatgaatgcagagaaattacaaagcagtccttgaatgtata-tttgttagtcaatattagggactaaagtgactaacgaagtc 1387407  T
Q  154 tacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||||||  | | ||||||||||||||  || | |||||||  |||||| | |||||||||||||| |||||    
T  1387408 tacattccggaactaaattgactaacggggtttgcattcaggaactaaagtgactaacaaagtctacattca 1387479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 3370132 - 3370012
Alignment:
Q  136 aaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttat 235  Q
    |||||||||||   |||||||||| |  || |||||||||||||||||||| ||||||| ||||||||| ||||||| |||||| ||| || ||   |||    
T  3370132 aaagtgactaatagagtctacattaagagactaaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatga--ctat 3370035  T
Q  236 tttgcaatttatctgcattcagg 258  Q
    ||||||||||||||| |||||||    
T  3370034 tttgcaatttatctggattcagg 3370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 279
Target Start/End: Original strand, 22017984 - 22018103
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| |||| ||| ||||| ||| ||||||||||||||||||  ||||||| |||||| ||||| ||| |  ||||||||||||||||||||||||    
T  22017984 ttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggact--attttgcaatttatctgcattcag 22018081  T
Q  258 ggattaaagtgacgactcattt 279  Q
     ||  ||| |||||||||||||    
T  22018082 agacgaaaatgacgactcattt 22018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 1387444 - 1387576
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattca-gagactaaattaactaacaaagtctatattc 224  Q
    |||||| | ||||||||||||| |||||||||||||  || |||||||||||||  ||||| |||||| | ||||||||| |  |||||| |||| ||||    
T  1387444 ttcaggaactaaagtgactaacaaagtctacattcagcgactaaattgactaacagagtctgcattcaggggactaaattgatgaacaaaatctacattc 1387543  T
Q  225 aaggattttattttgcaatttatctgcattcaggg 259  Q
    | |||   |||||| ||||||||||||||||||||    
T  1387544 aggga--atattttacaatttatctgcattcaggg 1387576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 55382835 - 55382732
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||  ||||| | |||||||| ||||| ||| |||||| ||| | | |||||| |||| |||| |||||||||||||||||| ||||    
T  55382835 attagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttagtca 55382736  T
Q  124 attt 127  Q
    ||||    
T  55382735 attt 55382732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 47463884 - 47463840
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  47463884 ttttgcaatttatctgcattcagggactaaagtgactactcattt 47463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 29908961 - 29908915
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||    
T  29908961 tattttgcaatttatctgcatccagtgactaaagtgacgactcattt 29908915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 30378778 - 30378844
Alignment:
Q  60 tcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatt 126  Q
    |||| |||||||||||||||||| |||||| |||| |||| ||||||| ||||| |||| |||||||    
T  30378778 tcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgttagtcaatt 30378844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 3391255 - 3391170
Alignment:
Q  55 agtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagt 140  Q
    ||||||||| |||||| ||| ||| | |||||||| |||| | ||  ||||||||||||||||| |||||||||| ||| ||||||    
T  3391255 agtagtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtcaatttcaaggactaaagt 3391170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 2232614 - 2232546
Alignment:
Q  59 gtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    ||||| |||||||||  ||||||| ||||||||||| ||||| | |||||||||| |||| ||||||||    
T  2232614 gtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaattt 2232546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 3370101 - 3370045
Alignment:
Q  135 taaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacatt 191  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||||  ||||||||||    
T  3370101 taaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatt 3370045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 10757640 - 10757596
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  10757640 ttttgcaatttatctacattcagggactaaagtgactactcattt 10757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 10970811 - 10970767
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  10970811 ttttgcaatttatctacattcagggactaaagtgactactcattt 10970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 55382692 - 55382764
Alignment:
Q  128 cagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    |||||| |||| ||||||||| | ||| |||| | |||  |||||||||||| ||||||||||||||||||||    
T  55382692 cagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattcagagacta 55382764  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 3391183 - 3391251
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgac 270  Q
    ||||| |||||||||||||| |||||| |||| |  |||||||||| ||||||||||| || |||||||||    
T  3391183 aaattgactaacaaagtctacattcaatgattgt--tttgcaatttctctgcattcagagactaaagtgac 3391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 47943727 - 47943624
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||||||  |||| || |||||| | |||||||| ||||| ||||||| |  ||| | | |||||| |||| ||||||||||||||||||| ||| ||||    
T  47943727 attagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggttagtca 47943628  T
Q  124 attt 127  Q
    ||||    
T  47943627 attt 47943624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 55382596 - 55382667
Alignment:
Q  42 tgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagact 113  Q
    |||||||||||||||||||||| ||||||| || ||| | |||||||| |||  ||||| ||||| ||||||    
T  55382596 tgaatggaaaatgagtagtcactttagtccgtgaatgcagagaaattgcaaagcagtccttgaatatagact 55382667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 8951131 - 8951189
Alignment:
Q  167 taaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||| |||||||||||||||||||| ||  |||||||| ||||||||| |||| |||||    
T  8951131 taaaatgactaacgaagtctacattaaggaactaaattgactaacaaaatctacattca 8951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 18836344 - 18836306
Alignment:
Q  241 aatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  18836344 aatttatctgcattcagggactaaagtgactactcattt 18836306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 12140762 - 12140693
Alignment:
Q  208 taacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||| | |||   | ||||||||||| | |||||||| ||||||||||||||||| ||||    
T  12140762 taacaaagtctatatttaggga--ctgttttgcaatttctttgcattcaaggattaaagtgacgacttattt 12140693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 18500743 - 18500691
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaa 178  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||||||| ||||    
T  18500743 ttcagggactaaattgactaacagagtctacattcagggattaaattggctaa 18500691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 22017952 - 22017912
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  22017952 ttttgcaatttctctgcattcagggactaaagtgactactc 22017912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 29909039 - 29908967
Alignment:
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattca 193  Q
    ||||||||||| | |||||||| ||| | | ||||||||||  || |||||||||||||| ||||| ||||||    
T  29909039 tcaatttcaggaactaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattca 29908967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 30470888 - 30470844
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||||    
T  30470888 ttttgcaatttctctgcattcaggaactaaagtgactactcattt 30470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 37694970 - 37694930
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  37694970 ttttgcaatttctctgcattcagggactaaagtgactactc 37694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 6e-62; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 279
Target Start/End: Original strand, 25149238 - 25149491
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||||||| |||| || |||||||||||| |||||||||| ||| |||||| ||| |||||||||| |||| |||||||||||||||||| |||||||||    
T  25149238 attagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtca 25149337  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||| ||| ||||||||| ||||  |||||| |||| ||| ||| |||||||||  ||||| ||||||||||||||||| |||||||||||||| |||    
T  25149338 atttcaaggactaaagtgacgaacggtgtctacgttcagggactaacttgactaacagagtctgcattcagagactaaattgactaacaaagtctacatt 25149437  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||  ||  |||||||||| ||||||||||||||| || || |||||||||||||||    
T  25149438 ca--gagattattttgcagtttatctgcattcagagactatagtgacgactcattt 25149491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 285
Target Start/End: Original strand, 23976086 - 23976349
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatga-gtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||||||||| ||  ||||||||||| || |||||||| ||||| |||| ||| | |||||||| |||| |||||||||||||||||| ||||    
T  23976086 gggaattagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtt 23976185  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
     ||||||||||||||||||||||||||||    |||||||||| ||  ||||||||| |||| ||||| ||||||| | ||||||| ||||||| || ||    
T  23976186 agtcaatttcagggagtaaagtgactaacatgatctacattcaggggctaaattgaccaacggagtctgcattcaggggctaaattgactaacagag-ct 23976284  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttatt 285  Q
    | ||||| |||   |||||| |||||||||| |||||||| | |||| ||||||||||||| |||||    
T  23976285 acattcaggga--ctattttacaatttatctacattcaggaactaaaatgacgactcatttcttatt 23976349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 286
Target Start/End: Original strand, 22469429 - 22469692
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    |||||||||||||||||||| |||||||| ||| |||||| ||| || || |||| ||||| |||||||| |||| |||||||||||| ||||| |||||    
T  22469429 gggaattagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttg 22469528  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||||||||| ||| |||||||||| ||| || ||||| ||| |||||||||||| | ||| |  |||||| || |||||| ||||||| | ||||    
T  22469529 gtcaatttcagggattaaggtgactaacggagttta-attcagggactaaattgactaatggagtttgaattcagggattaaattgactaacagaatcta 22469627  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
     ||||  | |   |||||| ||||||||||||||| | ||| |||||||||||||||||| ||||||    
T  22469628 cattctggaa--ctattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattc 22469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 12106862 - 12107037
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||| | |||||||| |||| |||||||| ||||||||| ||||    
T  12106862 ggggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgtt 12106961  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcag 194  Q
    ||||||||||||||| ||||||||| |||| |||||||||| | ||| ||| || | ||||  |||||||||||||    
T  12106962 ggtcaatttcagggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcag 12107037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 82 - 286
Target Start/End: Original strand, 22326464 - 22326666
Alignment:
Q  82 agaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacga 181  Q
    ||||||||||||| ||||| |||||||||||| | ||||||||||| ||||| |||||||| ||||| | |||||||||| | | ||||| | |||||||    
T  22326464 agaaattgtaaaatagtccttgaatgtagactctattggtcaattttagggactaaagtgattaacggaatctacattcaggaactaaataggctaacga 22326563  T
Q  182 agtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttt 281  Q
    | ||| ||||||||||||||||| | ||||||| |||||||| |||||  ||||||| ||||||||||||||||| ||| ||||||| || ||||| ||     
T  22326564 aatctgcattcagagactaaattgattaacaaaatctatatttaagga--ttattttacaatttatctgcattcaaggactaaagtggcgcctcatattc 22326661  T
Q  282 tattc 286  Q
    |||||    
T  22326662 tattc 22326666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 18324282 - 18324029
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    |||||||||| ||| ||||||| |||||||  |||   |||||||  |||||||||| ||| | |||||||| |||| ||||| ||||||| |||| ||     
T  18324282 aggggaattaatcattttaatccctgaatgagaaagacgtagtcattttagtccctgaatgcagagaaattgcaaaacagtccatgaatgtcgactctgc 18324183  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||||| | | |||||||||||||| |||||||||| | ||| |||||||||||||| ||| | |||||||  |||||||| ||||| ||||||    
T  18324182 tggtcaatttcatgaactaaagtgactaacggagtctacatttaaggactaaattgactaacggagtttgcattcaggaactaaattgactaataaagtc 18324083  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgac 273  Q
    || ||||| |||   |||||| ||||||||||||||||| | | |||| |||||||    
T  18324082 tacattcaggga--ctattttacaatttatctgcattcatgaactaaaatgacgac 18324029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 274
Target Start/End: Original strand, 37543803 - 37544040
Alignment:
Q  26 tagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaat 125  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||  ||         |||||| |||| ||| | |||||||| ||||| |||||||||    
T  37543803 tagtcactttagtctctgaatggaaaatgagtagtcactttagtcagtg---------aaattgcaaaatagttcatgaatgtaaactttattggtcaat 37543893  T
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||| ||| |||||||| ||||| |||||| ||||| ||| |||||| ||||||| | ||| ||||||| || |||||| |||||||||||||| | |||    
T  37543894 ttcatggactaaagtgattaacggagtctatattcagggactaaattaactaacggaatctgcattcagggattaaattgactaacaaagtctacaatca 37543993  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    | ||   ||||||||||||||||| |||||||||| |||| || |||||    
T  37543994 atga--ctattttgcaatttatctacattcagggactaaaatggcgact 37544040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 57 - 265
Target Start/End: Complemental strand, 35202845 - 35202638
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctac 156  Q
    ||||||| ||||| |||| ||| | |||||||| |||| |||||||||||||  ||| ||||||||||||||||| | |||||||||||||| |||||||    
T  35202845 tagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtttactctgttggtcaatttcaggaactaaagtgactaacggagtctac 35202746  T
Q  157 attca-tggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattc 255  Q
    |||||  ||| |||||||||||||  | ||| |||||||  |||||||| ||||||| |||||| ||| |||||    |||||||||||||| |||||||    
T  35202745 attcaggggactaaattgactaacagaatctgcattcaggaactaaattgactaacatagtctacatttaagga--ccattttgcaatttatttgcattc 35202648  T
Q  256 agggattaaa 265  Q
    ||||| ||||    
T  35202647 agggactaaa 35202638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 21124642 - 21124444
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| |   ||||||  ||| |||||||||| ||| | |||| ||||| |||||||| |||| ||||| |||||||||||| |||||    
T  21124642 gggaattagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaacagtccttgaatgtagactctgttg 21124543  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    |||||||| | ||| ||||||| |||||| |||||||| |   ||| |||||||||||||| |||||||| |  | ||||||||| |||||| ||||||    
T  21124542 gtcaattttatggactaaagtggctaacggagtctacactaggggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtct 21124444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 4288917 - 4289173
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt- 117  Q
    ||||||||||||| |||| || |||| |||||||  ||||||||| ||||| | || ||||| |||||||| |||| | |||  ||||||||||| | |     
T  4288917 ggggaattagtcattttagtccctgattggaaaaaaagtagtcactttagttcatgaatgtagagaaattgcaaaacattcctcgaatgtagactcttta 4289016  T
Q  118 --tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaag 215  Q
      | |||||||||||||| |||||||||||||  ||||||||||||  || |||||||| ||||  ||||| |||| |||||||||||| ||||||| ||    
T  4289017 attagtcaatttcagggattaaagtgactaacagagtctacattcaaagactaaattgattaacatagtctgcatttagagactaaattgactaacatag 4289116  T
Q  216 tctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    |||   ||||| ||   |||||||||| ||||||||||||  ||| |||| ||||||||    
T  4289117 tctgcgttcaaaga--ctattttgcaacttatctgcattcgtggactaaaatgacgact 4289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 10289481 - 10289294
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||| |||  ||| | ||||||||||||| ||| |||||||||||||| |  |    
T  10289481 ggggaattagtcactttaatccctaaatggaaaatgagtagtcac-ttagttcctaaatgcagagaaattgtaaaacagttcctgaatgtagactctagt 10289383  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaa 210  Q
    ||||||||| | ||  |||||||||||||||||| | ||||||  || |||||||| |||   |||||||||||| ||| |||||| |||||    
T  10289382 ggtcaattttaagggctaaagtgactaacgaagtttgcattcaaagactaaattgattaa--gagtctacattca-agattaaattgactaa 10289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 31254111 - 31253995
Alignment:
Q  96 agtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcaga 195  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||||||| || |||||||| | ||| |||||||||||||  ||||| |||||||     
T  31254111 agtccttgaatgtagactccgttggttaatttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagg 31254012  T
Q  196 gactaaattaactaaca 212  Q
    ||||||||| |||||||    
T  31254011 gactaaattgactaaca 31253995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 21185946 - 21185804
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| || |||||||  |||||||||||||| |||||||||| |||   | |||||| ||||   ||||| ||| |||||| ||||    
T  21185946 ggggaattagtcactttagtcgctgaatgagaaatgagtagtcactttagtccctgaatgctgaaaaattgaaaaacgttccctaaatatagactctgtt 21185847  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattca 161  Q
    ||||||||||| ||| |||||||||||||  ||| ||||||||    
T  21185846 ggtcaatttcatggactaaagtgactaactgagtgtacattca 21185804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 12106969 - 12107083
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| |||| |||| |||| |||||||||| || |||||| |||| ||||| |||||| ||||| |||||  |||||||||||||||||||||||     
T  12106969 ttcagggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcagggatt--attttgcaatttatctgcattcaa 12107066  T
Q  258 ggattaaagtgacgact 274  Q
    ||| |||||||||||||    
T  12107067 ggactaaagtgacgact 12107083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 271
Target Start/End: Complemental strand, 21124500 - 21124361
Alignment:
Q  130 gggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaagga 229  Q
    |||| |||| ||||||||| |||||||| |   ||| |||||||||||||||||||| ||||||| ||||||||| ||||| | |||||| ||| |  ||    
T  21124500 gggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattta--ga 21124403  T
Q  230 ttttattttgcaatttatctgcattcagggattaaagtgacg 271  Q
       |||||||||||||||||| |||||| || ||||||||||    
T  21124402 gactattttgcaatttatctgtattcagagactaaagtgacg 21124361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 23625253 - 23625112
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| ||||||||| | |||  ||||||||| ||| ||  ||| || | ||||||||||||| | | ||||||||||||||  ||||    
T  23625253 gggaattagtcactttagtctctgaataggaaaaaagtagtcactttaatctttgggtgcagagaaattgtaaaacacttcctgaatgtagactgcgttg 23625154  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattca 161  Q
     ||||||||||||| |||| |||| |||  ||||| ||||||    
T  23625153 atcaatttcagggactaaattgaccaacagagtctgcattca 23625112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 29585574 - 29585651
Alignment:
Q  148 gaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||||||||||||| ||| ||||||||||||| |||||| ||||||| ||||||||| | |||||||||||| |||||    
T  29585574 gaagtctacattcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattca 29585651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 21184436 - 21184325
Alignment:
Q  165 attaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaa 264  Q
    |||||||||| ||||| |||||  |||||| ||||||||| ||||| || || |||||||| ||| |  |||||||||||||||||||||| |||| ||     
T  21184436 attaaattgattaacggagtctgtattcagggactaaattgactaataa-gtttatattcagggact--attttgcaatttatctgcattcggggactag 21184340  T
Q  265 agtgacgactcattt 279  Q
    |||||||||||||||    
T  21184339 agtgacgactcattt 21184325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 41358778 - 41358930
Alignment:
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    ||||||||||| || ||||||||||||| |||||||||||||  ||  ||| | || ||  |||||| ||||||  ||||||||| | ||||| ||||||    
T  41358778 gtcaatttcagagactaaagtgactaacaaagtctacattcagagacaaaagtaacaaataaagtctgcattcatggactaaattgattaacagagtcta 41358877  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
     ||||| ||| |  |||||||||||||||| |||||| ||||||||  |||||||    
T  41358878 cattcagggact--attttgcaatttatctacattcatggattaaaaggacgact 41358930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 37494332 - 37494464
Alignment:
Q  41 ctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagt 140  Q
    |||||| | |||| ||||||||| |||||||||| ||| | ||||||||||||| | || ||       |||| ||||||||||||| ||||||| || |    
T  37494332 ctgaataggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaacaatctctt------gactctgttggtcaattttagggagtgaatt 37494425  T
Q  141 gactaacgaagtctacattcatggattaaattgactaac 179  Q
    |||||| ||||||| |||||| ||| |||||||||||||    
T  37494426 gactaatgaagtctgcattcagggactaaattgactaac 37494464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 29585584 - 29585658
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    |||||||| |||| |||||||| |||||| |||||| ||| |||||||| |||| |||||||||||||| |||||    
T  29585584 ttcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggacta 29585658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 22426995 - 22426877
Alignment:
Q  154 tacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcat 253  Q
    |||||||| |||  |||||||||||   || |||||||||| ||||||||| ||||||| || ||| ||||| |||   |||||||||||||||| ||||    
T  22426995 tacattcagggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcaggga--ctattttgcaatttatc-gcat 22426899  T
Q  254 tcagggattaaagtgacgactc 275  Q
    ||| ||| |||||||| |||||    
T  22426898 tcatggactaaagtgatgactc 22426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 12106937 - 12106893
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||    
T  12106937 ttttgcaatttctctgcattcagggactaaagtgactactcattt 12106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 12107119 - 12107020
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| ||||| ||| | |||  ||| ||||| ||||||| || ||| | | |||||| |||| | |||||||||||||||| ||||    
T  12107119 ggggaattagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgtt 12107020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 18324057 - 18324100
Alignment:
Q  84 aaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  18324057 aaattgtaaaatagtccctgaatgtagactttattagtcaattt 18324100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 25149517 - 25149414
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| || |||||| | |||||||| |||||  ||||| ||| ||| | | ||| || |||| | || |||||||||||||||||| ||||    
T  25149517 attagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgttagtca 25149418  T
Q  124 attt 127  Q
    ||||    
T  25149417 attt 25149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 23976343 - 23976267
Alignment:
Q  50 aaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    |||||||| ||||  ||||| |||| ||||| | ||||||||||| ||||||||||||||| || |||| ||||||||    
T  23976343 aaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagtcaattt 23976267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 25149308 - 25149263
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcatttt 280  Q
    ||||||||||| | |||||||||||||||||||||| |||| ||||    
T  25149308 ttttgcaatttctttgcattcagggattaaagtgactactcttttt 25149263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 24609152 - 24609188
Alignment:
Q  182 agtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  24609152 agtctacattcagagactaaattaattaacagagtct 24609188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 10760002 - 10760282
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||  || |||| |||||||||||||| ||| ||||| |||| ||||| |||||||| |||| |||||||||||||| |||||||    
T  10760002 aggggaattagtcactttggtccctgagtggaaaatgagtagccactttagttcctgaatgtagagaaattgaaaaacagtccctgaatgtaaactttgt 10760101  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||||| ||| |||| ||| ||||| |||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||| ||| ||| ||||    
T  10760102 tggtcaatttcaaggactaaa-tgattaacggagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattgacttacagagtc 10760200  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc-gggattgaagtgac 300  Q
    || ||| | |||   ||||||||||||||||||||||||| || |||||||||| |||||||  ||||| |||||| |||||||    
T  10760201 tacatttaggga--ctattttgcaatttatctgcattcagagactaaagtgacggctcatttcctattcagggattaaagtgac 10760282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 2555723 - 2555465
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||| ||| || |||||||| |||| | |||| || |||||| ||  ||| | | |||||| |||| ||||||||||||||||||  |||    
T  2555723 ggggaattagtcacgttagtccctgaatgggaaataattagttactttagtctctaaatgcagaaaaattgcaaaacagtccctgaatgtagactgcgtt 2555624  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||| ||| |||||||||||||||| ||||||  ||||||||| ||||||| |||||    
T  2555623 ggtcaatttcagggattaaagtgactaacgaagtctacgttcagggactaatttgactaacgaagtctgcattcaacgactaaattgactaacagagtct 2555524  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    | |||||  ||   ||||||||||| ||| || ||||||||| |||||| |||||||||||    
T  2555523 acattca--gagactattttgcaatatatttgtattcagggactaaagttacgactcattt 2555465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 286
Target Start/End: Original strand, 21943741 - 21944003
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggt 121  Q
    ||||||||||||||| ||  ||||||| |||||||||||||| ||||| |||| ||| | |||||||| |||| || || ||||||||||||||||| ||    
T  21943741 gaattagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagt 21943840  T
Q  122 caatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctata 221  Q
    |||||| ||||| |||||||| ||||  | ||||||||||  || ||||||||||||| |||| | ||||||| ||||||||| | ||||| |||||| |    
T  21943841 caattttagggactaaagtgattaacataatctacattcaaagactaaattgactaacaaagtatgcattcagggactaaattgattaacagagtctaca 21943940  T
Q  222 ttcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    |||| | |   ||||||||||||||| ||||||||  || |||| |||||| ||||||| |||||    
T  21943941 ttcatgaa--ctattttgcaatttatttgcattcaatgactaaaatgacgattcattttctattc 21944003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 13753224 - 13753477
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| || || ||| |||||||||||||||| ||||||  || ||| | |||||||| |||| |||  |||| |||||||| ||||    
T  13753224 ggggaattagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagtatctgagtgtagactctgtt 13753323  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||||| |||||||||| | | ||||||| |||| ||  |||||||||||||| ||||| |||| |  ||||||||| ||| ||| |||||    
T  13753324 ggtcaatttcagggactaaagtgactgatggagtctactttcaggggctaaattgactaacggagtctgcatttaaggactaaattgacttacagagtct 13753423  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    | ||| | |||   ||||||||||||||||||||||||| || |||| ||||||||    
T  13753424 acatttaggga--ctattttgcaatttatctgcattcagagactaaaatgacgact 13753477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 21 - 248
Target Start/End: Complemental strand, 17497277 - 17497052
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    ||||| |||||||||| ||  ||||||  |||||||||||||  |||||||||| ||| | |||||||| |||| |||||||||||||||||||||||||    
T  17497277 ggaatgagtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttgg 17497178  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctat 220  Q
    ||||||||||||| |||||||||  ||| |||||||||||| ||| |||||| ||||||  | ||| ||||||  ||||||||| ||||||| || |||     
T  17497177 tcaatttcagggactaaagtgaccgacggagtctacattcagggactaaattaactaacagaatctgcattcaaggactaaattgactaacagagactac 17497078  T
Q  221 attcaaggattttattttgcaatttatc 248  Q
    ||||| |||   ||||||||||||||||    
T  17497077 attcacgga--ctattttgcaatttatc 17497052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 286
Target Start/End: Complemental strand, 34419687 - 34419499
Alignment:
Q  96 agtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcaga 195  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||  |||||||||| | ||| |||||||||||||||||||| | || |      
T  34419687 agtccctgaatgtagactttgttggtcaatttcagggactaaaatgaccaacagagtctacatttaaggactaaattgactaacgaagtctgcttttatc 34419588  T
Q  196 gactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    ||||||||| ||||||| |   || ||||| |||   ||||||||||||||||||||||| | ||||||||||||||||| |||| |||||    
T  34419587 gactaaattgactaacagaacttacattcaggga--ctattttgcaatttatctgcattctgagattaaagtgacgactccttttctattc 34419499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 21211419 - 21211573
Alignment:
Q  26 tagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaat 125  Q
    ||||||||||| || |||||||| |||||||||||||| |||||||||| ||| | | |||||| |||| |||| |||||||||||||||||||||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacg 180  Q
    |||||| | |||||||||||||| | ||||||||||  || |||||| |||||||    
T  21211519 ttcaggaactaaagtgactaacgcaatctacattcagagactaaattaactaacg 21211573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 19491951 - 19491708
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  |||||||  ||| |||||||||| | ||||| || ||| | |||||||| |||| ||| | |||| ||||||| |||| ||||    
T  19491951 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 19491852  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||| ||| ||| |||||||||  |||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| || ||||||| ||| || |||    
T  19491851 atttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 19491752  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtga 269  Q
    ||   |   ||||||||||||||||||||||||  || ||||||||    
T  19491751 ca--taaactattttgcaatttatctgcattcatagactaaagtga 19491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 270
Target Start/End: Complemental strand, 11298165 - 11297993
Alignment:
Q  97 gtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagag 196  Q
    |||| |||||| |||||||||| |||||||| |  || |||||||| ||||  |||||||||||| | | |||||||||||| | ||||| |||||||||    
T  11298165 gtccttgaatgaagactttgttagtcaattttaaagattaaagtgattaacagagtctacattcaggaactaaattgactaatggagtctgcattcagag 11298066  T
Q  197 actaaattaactaacaaagtctatattcaaggattttattttgcaatttatc-tgcattcagggattaaagtgac 270  Q
    |||||||| ||||||| ||||||| |||| |||  ||||||||||||||||| | |||||||| | |||||||||    
T  11298065 actaaattgactaacagagtctatgttcaggga--ttattttgcaatttatcttacattcaggaactaaagtgac 11297993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 258
Target Start/End: Original strand, 30100609 - 30100843
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| || || | ||  ||| |||||||||| ||| |||||  ||| | |||||||| |||| | ||| |||||||||||||| ||    
T  30100609 ggggaattagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatccttgaatgtagactttatt 30100708  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
       |||||||||||| ||||||||| |||  |||||||||||| ||| || ||||||||| | ||||| ||||||| ||||||| | | ||||| |||||    
T  30100709 ---caatttcagggactaaagtgacaaacagagtctacattcagggactatattgactaatggagtctgcattcagggactaaagtgattaacagagtct 30100805  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagg 258  Q
      ||||| |||   ||||||||||||||||| ||||||||    
T  30100806 gcattcatgga--ctattttgcaatttatctacattcagg 30100843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 30852786 - 30852657
Alignment:
Q  96 agtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcaga 195  Q
    ||||||||| |||||||| ||||||||||||||| | | |||||||||||||| | ||||||||||  || |||||||||| ||||||||| |||||||     
T  30852786 agtccctgattgtagactctgttggtcaatttcatgaactaaagtgactaacggaatctacattcagagactaaattgacttacgaagtctgcattcagg 30852687  T
Q  196 gactaaattaactaacaaagtctatattca 225  Q
    ||||||||| ||||||| ||| || |||||    
T  30852686 gactaaattgactaacagagtttacattca 30852657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 20429872 - 20430079
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||| |||||||||||| || |||||||  ||| |||||||| | |||| | ||||||| | |||||||| |||| ||||  |||||||||||| ||||    
T  20429872 ggggagttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgtt 20429971  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||| ||| ||||||||| |||  ||| ||||||||   | |||||| ||||||  ||||| ||||||   |||||||| ||||||  |||||    
T  20429972 ggtcaatttcaaggactaaagtgacgaacagagtttacattcaaaaactaaattaactaacagagtctgcattcatgaactaaattgactaacggagtct 20430071  T
Q  219 atattcaa 226  Q
    ||||||||    
T  20430072 atattcaa 20430079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 279
Target Start/End: Original strand, 19564713 - 19564908
Alignment:
Q  82 agaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacga 181  Q
    |||||||| |||| |||  || |||||||||| || || ||||||||||||| |||||||| ||| | ||||||||||||  || ||||||||||||||     
T  19564713 agaaattgcaaaacagtttctaaatgtagactctggtgatcaatttcagggactaaagtgattaatggagtctacattcagagactaaattgactaacgg 19564812  T
Q  182 agtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||| |  | |||  || |||||| |||||| |||| || ||||||  |   ||||||||||||||||| |||||| ||| ||||||||||||| ||||    
T  19564813 agtatggaatcaaggaataaattgactaacgaagtttacattcaa--aaactattttgcaatttatctccattcaaggactaaagtgacgactgattt 19564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 31912189 - 31912375
Alignment:
Q  17 taggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttg 116  Q
    |||||||||||||||||||| ||  ||||||| ||| || ||||||  ||| |||||| ||| | ||| ||||||||| ||||  | || ||||||   |    
T  31912189 taggggaattagtcactttagtccttgaatgggaaaagaatagtcattttaatccctgaatgcagagacattgtaaaacagtcatttaacgtagacaacg 31912288  T
Q  117 ttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaat 203  Q
    || |||||||||| ||| |||||||||||||  |||||||| | |  || |||||||||||||| |||||  |||||  ||||||||    
T  31912289 ttagtcaatttcatggactaaagtgactaacagagtctacagtaaatgactaaattgactaacggagtctgtattcaaggactaaat 31912375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 32539326 - 32539437
Alignment:
Q  82 agaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacga 181  Q
    |||||||| |||| |||| ||||||||||| | | ||  ||||||||||| | |||||||||||||  |||||||||||| | | |||||||||||||||    
T  32539326 agaaattgcaaaacagtctctgaatgtagagtatattaatcaatttcagg-actaaagtgactaacatagtctacattcaagaactaaattgactaacga 32539424  T
Q  182 agtctacattcag 194  Q
    ||| | |||||||    
T  32539425 agtatgcattcag 32539437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 12895747 - 12895607
Alignment:
Q  82 agaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacga 181  Q
    |||||||| |||| ||||  |||||||||| ||||||||||| ||| ||| | |||||| | |||||||||||||||| ||  | |||||||||||||      
T  12895747 agaaattgcaaaacagtcgttgaatgtagattttgttggtcatttt-aggtactaaagtaattaacgaagtctacatttata-actaaattgactaacag 12895650  T
Q  182 agtctacattcagagactaaattaactaacaaagtctatattc 224  Q
    ||||| |||| |  || |||||| |||||||||||||| ||||    
T  12895649 agtctgcatttaaggattaaattgactaacaaagtctacattc 12895607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 43549053 - 43548948
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggt 121  Q
    ||||||||||||||| |||||||||| |||   | ||||||| ||||||| ||  || | |||||||| |||| ||| | |||||||||||| |||||||    
T  43549053 gaattagtcactttagtctctgaatgaaaaggaaatagtcactttagtccttgattgcagagaaattgcaaaacagtacatgaatgtagactatgttggt 43548954  T
Q  122 caattt 127  Q
    ||||||    
T  43548953 caattt 43548948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 21943846 - 21943769
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||| |||||||||||||| ||||||||  | | ||||||||||| |||||||||||| | ||||||||| ||||||||    
T  21943846 aaattgactaacaaagtctacattcaagg--tctgttttgcaatttctctgcattcaggtactaaagtgactactcattt 21943769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 10760284 - 10760183
Alignment:
Q  26 tagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaat 125  Q
    |||||||||||||| |||||| | |||||||  ||||| |||||| ||| ||| | | |||||| |||| ||||||| |||||||||| |||  ||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  126 tt 127  Q
    ||    
T  10760184 tt 10760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 12895664 - 12895599
Alignment:
Q  135 taaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    |||| ||||||||  ||||| |||| | ||||||||||||||||| |||||||||||| |||||||    
T  12895664 taaattgactaacagagtctgcatttaaggattaaattgactaacaaagtctacattcggagacta 12895599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 21211606 - 21211643
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtgac 270  Q
    |||||||||||||||||||||||||||| |||||||||    
T  21211606 tattttgcaatttatctgcattcagggactaaagtgac 21211643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 17497171 - 17497248
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||| || ||||||||||| ||||| ||| |  |||||||||||| |||||||||||||| |||| |||| ||||||||    
T  17497171 aaattgaccaacaaagtctacattcagggact--attttgcaatttctctgcattcagggactaaaatgactactcattt 17497248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 21211487 - 21211443
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||    
T  21211487 ttttgcaatttttctgcattcagggactaaagtgactactcattt 21211443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 21211528 - 21211572
Alignment:
Q  167 taaattgactaacgaagtctacattcagagactaaattaactaac 211  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||    
T  21211528 taaagtgactaacgcaatctacattcagagactaaattaactaac 21211572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 30100705 - 30100644
Alignment:
Q  212 aaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    |||||||| ||||||||||| |  |||||||||| |||||||| ||||||||||||||| ||||    
T  30100705 aaagtctacattcaaggattgt--tttgcaatttctctgcatttagggattaaagtgactactc 30100644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 34419738 - 34419674
Alignment:
Q  16 ataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgta 80  Q
    |||||| |||||||||||||||||  ||||||  ||| |||||||||| |||||||||| |||||    
T  34419738 atagggaaattagtcactttaatccttgaatgagaaaggagtagtcactttagtccctgaatgta 34419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 2555439 - 2555542
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||||||||||||  |||||| | | |||||||| || || |||||||||| ||  ||| | |||| |||| |||| ||||||||||||| |||| ||||    
T  2555439 attagtcactttagcctctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttagtca 2555538  T
Q  124 attt 127  Q
    ||||    
T  2555539 attt 2555542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 30852724 - 30852656
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcag 194  Q
    ||||| || |||| ||||| ||||||||| |||||| ||| |||||||||||||  ||| |||||||||    
T  30852724 ttcagagactaaattgacttacgaagtctgcattcagggactaaattgactaacagagtttacattcag 30852656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 25089436 - 25089182
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| || ||||||||| ||||| ||||||| |||||| ||| ||| | |||||||| |||| ||| ||||||| |||||| ||||    
T  25089436 ggggaattagtcactttagtccctgaatggacaatgaatagtcactttagtcactgaatgcagagaaattgcaaaacagttcctgaatatagactatgtt 25089337  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||| ||| |||||||||||| |||||||||||||| ||| |||||||||||| | ||||| ||||||  ||||||||| ||||||| |||||    
T  25089336 ggtcaatttcatggactaaagtgactaatgaagtctacattcagggactaaattgactaatggagtctgcattcaatgactaaattgactaacagagtct 25089237  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    | ||||| |||   ||||||||||||||||||||||||| || ||||||| ||||||    
T  25089236 acattcaggga--ctattttgcaatttatctgcattcagagactaaagtggcgactc 25089182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 286
Target Start/End: Original strand, 19295273 - 19295541
Alignment:
Q  16 ataggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagacttt 115  Q
    ||||||||||||||||||||| ||  ||||| | ||| |||||||||| |||||||||| |||   |||||||| |||| ||||||| ||| ||| || |    
T  19295273 ataggggaattagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctat 19295372  T
Q  116 gttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaag 215  Q
    ||| |||||||||||||| ||||||||| |||| |||||||||||| ||| |||||||||||| ||||||| ||||||| ||||||||| ||||||| ||    
T  19295373 gttagtcaatttcagggactaaagtgaccaacggagtctacattcagggactaaattgactaatgaagtctgcattcagggactaaattgactaacagag 19295472  T
Q  216 tctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    |||  ||||| |||   ||||||| |||||||||||||||||||| |||||| ||||||| |||| |||||    
T  19295473 tctgcattcaggga--ctattttgtaatttatctgcattcagggactaaagtaacgactccttttctattc 19295541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 13536846 - 13536594
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| ||  ||||||  ||| |||||||||| |||||| ||| ||  | |||||||| |||| |||||||||||||||||| | |    
T  13536846 aggggaattagtcactttagtccttgaatgagaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagactctat 13536747  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattca-tggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagt 216  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||  ||  |||||||||||||| ||||| ||||||| ||||||||| ||||||| |||    
T  13536746 tggtccatttcagggactaaagtgactaacagagtctacattcagggggctaaattgactaacggagtctgcattcagggactaaattgactaacagagt 13536647  T
Q  217 ctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacg 271  Q
    ||| ||||| |||   |||||||||||||||||||||||||| ||||||||||||    
T  13536646 ctacattcaggga--ctattttgcaatttatctgcattcaggcattaaagtgacg 13536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 26705312 - 26705127
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| |  |||||||||||| |||||||||| |||||||||| ||||| |||||||| |||| ||||||||||||||||| |||||    
T  26705312 ggggaattagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagacgttgtt 26705213  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaatt 204  Q
    ||||||||||||||| ||||||||||||||   |||||||||| ||| |||||||||||||| | |||| |||||| |||||||||    
T  26705212 ggtcaatttcagggactaaagtgactaacgggttctacattcagggactaaattgactaacggattctatattcagggactaaatt 26705127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 10672614 - 10672847
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||| | ||||||| |||||||  |||||||||||||| ||||||   | ||| | | ||||| ||||| |||||||||||||||||| ||||    
T  10672614 ggggaattagtta-tttaatccctgaatgagaaatgagtagtcactttagtcttcgaatgcataaaaattataaaacagtccctgaatgtagactatgtt 10672712  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||| ||||||||| | || |||||||||||||||||||||||| ||| |||||||||||||||| | | ||||||||||||||||| | ||||||| |||    
T  10672713 ggtaaatttcaggaactatagtgactaacgaagtctacattcagggactaaattgactaacgaaatatgcattcagagactaaattgattaacaaa-tct 10672811  T
Q  219 atattcaaggattttattttgcaatttatctgcattca 256  Q
    | ||||| | |   ||||||||||||||||||||||||    
T  10672812 acattcaggaa--ctattttgcaatttatctgcattca 10672847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 21222460 - 21222713
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||||| |||||| |  |||||||  ||| |||||||||| | ||||| || ||| | |||||||| |||| ||||| |||| ||||||| ||||    
T  21222460 ggggaattagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgtt 21222559  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
     |||||||||| ||| ||| |||||||||  |||||||||||| ||| |||||||||||||||||||| |||||||||||||| || ||||||| ||| |    
T  21222560 agtcaatttcaaggattaatgtgactaactgagtctacattcagggactaaattgactaacgaagtctgcattcagagactaagttgactaacatagtat 21222659  T
Q  219 atattcaaggattttattttgcaatttatc--tgcattcagggattaaagtgacga 272  Q
    | |||||  ||   ||||||||||||||||  | |||||||||| |||||||||||    
T  21222660 acattca--gagactattttgcaatttatctatacattcagggactaaagtgacga 21222713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 275
Target Start/End: Original strand, 10587882 - 10588120
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||| ||  ||||||  ||| |||||||||| |||||||||| ||| | |||||||| |||| |||||||||||||||||| ||||    
T  10587882 ggggaattagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgtt 10587981  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    | ||||||||||||| ||||||||||||      ||||          |||||||||||||| ||||| ||||||  ||||||||| ||||| |||||||    
T  10587982 gttcaatttcagggactaaagtgactaa------ctac----------taaattgactaacggagtctgcattcaaggactaaattgactaataaagtct 10588065  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    | ||||| |||   |||||||||||||||||||||||| ||| | ||||||| ||||    
T  10588066 acattcatgga--ctattttgcaatttatctgcattcatggacttaagtgacaactc 10588120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 280
Target Start/End: Complemental strand, 10862250 - 10862038
Alignment:
Q  65 ttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatgg 164  Q
    |||||||||| ||| | |||||||| |||| |||  ||||||||||||||  ||||||||||||||||| ||||||||| |||  |||||| ||||| ||    
T  10862250 ttagtccctgaatgcagagaaattgcaaaacagtagctgaatgtagactta-ttggtcaatttcagggactaaagtgacgaacagagtctatattcaggg 10862152  T
Q  165 attaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaa 264  Q
    | |||||||||||||| ||||| | ||||| || | |||| ||||||| |||||| ||||| |||   ||  |||||||| || |||||||||||| |||    
T  10862151 actaaattgactaacggagtctgccttcagggattgaattgactaacagagtctacattcaggga--ctacattgcaattaatttgcattcagggactaa 10862054  T
Q  265 agtgacgactcatttt 280  Q
    ||||||||||| ||||    
T  10862053 agtgacgactcctttt 10862038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 279
Target Start/End: Original strand, 12651194 - 12651335
Alignment:
Q  135 taaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggatttta 234  Q
    ||||||||||||| |||||||||| ||  || |||||||||||||  ||||  ||||||| ||| ||||| ||||||  ||||||||||||| ||||  |    
T  12651194 taaagtgactaacaaagtctacat-cagagactaaattgactaacagagtcggcattcagggaccaaattgactaacggagtctatattcaaagatt--a 12651290  T
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||| ||||||||||||||||||  ||||||||||| || ||||||    
T  12651291 tttagcaatttatctgcattcacagattaaagtgatgattcattt 12651335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 19295560 - 19295457
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||||||||| ||||| |||| || || |||||||||| ||| | | |||||  |||| |||||||||||| ||||| |||| ||||    
T  19295560 attagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgttagtca 19295461  T
Q  124 attt 127  Q
    ||||    
T  19295460 attt 19295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 10862013 - 10862115
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    |||||||| |||| |||||||||| |||| |||| ||||| |||||||||| ||| |||  ||||| ||   |||||||||||||||||| |||| ||||    
T  10862013 attagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgttagtca 10862112  T
Q  124 att 126  Q
    |||    
T  10862113 att 10862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 10588150 - 10588047
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| || |||||| | ||| |||| ||||| | ||||| || ||| | | |||||| |||| ||||| |||||||||||||| || ||||    
T  10588150 attagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttattagtca 10588051  T
Q  124 attt 127  Q
    ||||    
T  10588050 attt 10588047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 13536560 - 13536663
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| || |||||| | ||| |||  ||||| ||| | |||| ||| | | |||||| |||| |||||||||||||||||| |||| ||||    
T  13536560 attagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtca 13536659  T
Q  124 attt 127  Q
    ||||    
T  13536660 attt 13536663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 28752314 - 28752277
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtgac 270  Q
    |||||||||||||||||||||||||| | |||||||||    
T  28752314 tattttgcaatttatctgcattcaggtactaaagtgac 28752277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 10587957 - 10587917
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  10587957 ttttgcaatttctctgcattcagggactaaagtgactactc 10587917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 21515028 - 21514775
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    |||||||||||||||||  || |||||| | |||||||||||||  ||||||| || ||||| | |||||  |||| |||||||||||||||||| | ||    
T  21515028 ggggaattagtcacttttgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagactatatt 21514929  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||| ||| |||||| ||||||  |||| ||||||| ||| |||||||||||||||||||  ||||||| ||||||||||||||||| |||||    
T  21514928 ggtcaatttcatggattaaagtaactaacagagtccacattcaaggactaaattgactaacgaagtccgcattcagggactaaattaactaacagagtct 21514829  T
Q  219 atattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgact 274  Q
    | |||||||||   |||||| ||||||||||| ||||||||| |||||||||||||    
T  21514828 acattcaagga--ctattttacaatttatctgtattcagggactaaagtgacgact 21514775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 15031503 - 15031312
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||| || |||||||| |||||||||||||| |||||| ||| ||| | |||||||| |||| ||||||| ||| ||||||||||||    
T  15031503 gggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttg 15031404  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaac 211  Q
    |||||||||||||| |||||||||||||| ||||||||||||  || |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  15031403 gtcaatttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattcagtgactaaattgactaac 15031312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 57 - 275
Target Start/End: Complemental strand, 48755574 - 48755357
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacga-agtcta 155  Q
    ||||||| |||||||||| ||| | |||||||| |||| ||| |||||||||||||| ||||||||||||||||||   ||||||||||||   ||||||    
T  48755574 tagtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtcaatttcaggggtcaaagtgactaacacgagtcta 48755475  T
Q  156 cattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattc 255  Q
    |||||||||| |||||||||||||| ||||| ||||||| ||||||||| ||||||| |||||| ||||| |||   |||||||||| ||||||||||||    
T  48755474 cattcatggactaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacattcaggga--ctattttgcaacttatctgcattc 48755377  T
Q  256 agggattaaagtgacgactc 275  Q
    || || ||||||||||||||    
T  48755376 agagactaaagtgacgactc 48755357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 33343289 - 33343025
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||  |||||  ||| ||| | |||||||| |||| ||||| ||||| || ||| |||    
T  33343289 aggggaattagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtccttgaatataaactctgt 33343190  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |||||||||||||| | |||| ||| |||| ||||||||||||| ||| |||||||||||||  ||| | ||||||| |||| |||| ||||||| ||||    
T  33343189 tggtcaatttcaggaactaaa-tgattaacaaagtctacattcagggactaaattgactaacatagtttgcattcagggact-aattgactaacatagtc 33343092  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    || ||||| |||    |||| |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  33343091 tacattcaggga--ccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattc 33343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 26498547 - 26498717
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtc 122  Q
    |||||||||||||| || |||||||| ||| |||||||||| |||||||||| ||| | |||||||| |||| |||||||||||||||||  ||||||||    
T  26498547 aattagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtc 26498646  T
Q  123 aatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattca 193  Q
    ||||||||||| |||||||||||||| ||| | ||||||  || |||||||||||||  ||||||||||||    
T  26498647 aatttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattca 26498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 285
Target Start/End: Complemental strand, 44968100 - 44967875
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctac 156  Q
    ||||||| ||||||| || ||||| | |||||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||   |||||||    
T  44968100 tagtcactttagtcc-tgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaatttcagggattaaagtgactaagagagtctac 44968002  T
Q  157 attcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattca 256  Q
    |||||  || |||||||||||| |  ||||  ||| |||||||||||| ||||||| |||||| ||||||  |   ||||||||||| ||| ||||||||    
T  44968001 attcaaagactaaattgactaatggggtctgtattgagagactaaattgactaacagagtctacattcaa--aaactattttgcaatatatttgcattca 44967904  T
Q  257 gggattaaagtgacgactcattttttatt 285  Q
    |||| ||||||||| ||||||||| ||||    
T  44967903 gggactaaagtgacaactcattttctatt 44967875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 15005241 - 15005032
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    ||||||||||||||||||||  |||||||  ||||| | ||||| |||||| ||| ||| | |||||||| |||| |||  ||||||||||||| ||| |    
T  15005241 gggaattagtcactttaatccttgaatgggtaatgactggtcactttagtctctgaatgcagagaaattgcaaaacagtttctgaatgtagactctgtcg 15005142  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||||||||| | ||||||||||| |||| |||||||| ||| |||||| ||||||  ||||| ||||||| || |||||| ||||||| ||||||    
T  15005141 gtcaatttcagggatttaagtgactaacaaagtatacattcaaggactaaattaactaactgagtctgcattcagggattaaattgactaacagagtcta 15005042  T
Q  220 tattcaagga 229  Q
     |||||||||    
T  15005041 cattcaagga 15005032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 38498386 - 38498222
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    |||||||||||||||||||| |||||||  ||| |||||||||| |||||||||| ||| | |||||||| |||| |||| ||||||||||||||||||     
T  38498386 gggaattagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgtta 38498287  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagt 184  Q
    || ||||| ||||| ||||||||||||   |||||||||||| ||| ||||||||||||| ||||    
T  38498286 gttaattttagggactaaagtgactaatagagtctacattcagggactaaattgactaacaaagt 38498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 11989039 - 11989240
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||| ||||||||||||  || ||||| || |||  ||||||||| |||||| ||| ||| | |||||||| |||| ||||||||||| |||||| |||    
T  11989039 aggggtattagtcacttttgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgt 11989138  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    ||||||||||||| || ||||||| |||||| |||||||||| | ||| |||||||| ||||| ||||| ||||||| ||||| ||| ||||||| ||||    
T  11989139 tggtcaatttcagagactaaagtggctaacggagtctacatttaaggactaaattgattaacggagtctgcattcagggactagattgactaacagagtc 11989238  T
Q  218 ta 219  Q
    ||    
T  11989239 ta 11989240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 69 - 279
Target Start/End: Complemental strand, 1426709 - 1426510
Alignment:
Q  69 tccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggatta 168  Q
    |||||| ||| | |||||||| |||| |||| ||||||||||||||||||||||||||||||         ||||||||| |||||||||| | ||| ||    
T  1426709 tccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtcaatttcag---------tgactaacggagtctacatttagggacta 1426619  T
Q  169 aattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtg 268  Q
    |||||||||||| ||||| ||||||| ||||||||| ||||||| | |||| ||||| | |   ||||||||||||||||||||||||||   |||||||    
T  1426618 aattgactaacggagtctgcattcagggactaaattgactaacataatctacattcaggaa--ctattttgcaatttatctgcattcaggatctaaagtg 1426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 14434641 - 14434841
Alignment:
Q  25 ttagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaa 124  Q
    |||||||||||||||  ||||||| |||||| ||||||| ||||||| |  ||| | ||| |||| |||| ||||| ||||||||||||||||| || ||    
T  14434641 ttagtcactttaatccatgaatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtccttgaatgtagactttgttagttaa 14434740  T
Q  125 tttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattc 224  Q
    ||||||||| ||||||||||| || ||||||||||||  || |||||| |||| |  ||| | ||||||| ||||||||| ||||||| |||||| ||||    
T  14434741 tttcagggactaaagtgactagcggagtctacattcagagactaaattaactatctgagtttgcattcagggactaaattgactaacagagtctacattc 14434840  T
Q  225 a 225  Q
    |    
T  14434841 a 14434841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 26920441 - 26920235
Alignment:
Q  17 taggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttg 116  Q
    ||||| ||||||| ||||||||  |||||| |||||  |||||| || ||||||  || ||| | | |||||| |||| ||| | |||||||| ||||||    
T  26920441 tagggaaattagtgactttaattcctgaatagaaaagtagtagttactttagtctatgaatgcagaaaaattgcaaaacagttcttgaatgtatactttg 26920342  T
Q  117 ttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagt 216  Q
    ||| ||||||||||||| |||||||||||| | || ||||||| | ||| |||||||||||||||||| |||||| ||  |||||||||||||| | |||    
T  26920341 ttgatcaatttcagggattaaagtgactaatggagcctacatttaaggactaaattgactaacgaagtatacattgaggaactaaattaactaatagagt 26920242  T
Q  217 ctatatt 223  Q
    |||||||    
T  26920241 ctatatt 26920235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 269
Target Start/End: Original strand, 18445405 - 18445648
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  ||||||   ||| |||||||||| | ||| | || ||| | |||||||| |||| ||| | |||| ||||||| |||| ||||    
T  18445405 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 18445504  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||| ||| ||| |||||||||  |||||| ||||  |||||||||||| ||||||||||| |||||||| ||||| || ||||||| ||| || |||    
T  18445505 atttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 18445604  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtga 269  Q
    ||  ||   |||||||||||||||||||||||| ||| ||||||||    
T  18445605 ca--gaaactattttgcaatttatctgcattcatggactaaagtga 18445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 20759209 - 20759030
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    ||||||||||  |||| || |||||||  ||| |||||||||  ||||||| || ||| | |||||||| |||| ||||| ||||||||||||||||| |    
T  20759209 ggaattagtcgttttagtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttag 20759110  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    ||||||||||||| |||||||||||||  ||||||   ||| ||| ||||||||||||   |||||| ||||||||||||    
T  20759109 tcaatttcagggactaaagtgactaacatagtctattctcagggactaaattgactaatagagtctatattcagagacta 20759030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 15031365 - 15031218
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    ||||| || |||| ||||||||| ||||||||||||  || |||||||||||||| ||| | ||||||| ||||||||| ||||||| |||||| |||||    
T  15031365 ttcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagtttgcattcagggactaaattgactaacagagtctacattca 15031266  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
     |||   |||||| ||||||||||||||||| ||| ||||||||||||||    
T  15031265 ggga--ctattttacaatttatctgcattcaaggactaaagtgacgactc 15031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 43562696 - 43562853
Alignment:
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||| || || ||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||  || |||||| || |||| | ||||    
T  43562696 gtcaattttagagactaaagtgactaacgatgtctacattcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaatcta 43562795  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
     |||||||||   |||||| ||||||||||||||||||  | |||| |||||| ||||||    
T  43562796 cattcaagga--ctattttacaatttatctgcattcagaaactaaaatgacgaatcattt 43562853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 38498256 - 38498154
Alignment:
Q  182 agtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttt 281  Q
    ||||||||||||| ||||||||| ||||||||||| |||||| | ||| |  ||||||||||||||||||||||||||| ||||||||  |||||||||     
T  38498256 agtctacattcagggactaaattgactaacaaagtttatatttatggact--attttgcaatttatctgcattcagggactaaagtgatcactcattttc 38498159  T
Q  282 tattc 286  Q
    |||||    
T  38498158 tattc 38498154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 36383205 - 36383085
Alignment:
Q  96 agtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcaga 195  Q
    |||||||||||| | ||| |||| |||||||| ||||| ||||||||||||||||||||| |||||  || ||||||||| ||| |||||| ||||||      
T  36383205 agtccctgaatgcaaactctgttagtcaattttagggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattcaag 36383106  T
Q  196 gactaaattaactaacaaagt 216  Q
    || |||||| |||||||||||    
T  36383105 gattaaattgactaacaaagt 36383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 39541873 - 39541766
Alignment:
Q  40 tctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaag 139  Q
    ||||||| |||||  ||||||||| |||||||||| ||| | ||||||||||||| |||| ||||||||||||| ||||||||||||| | |||  ||||    
T  39541873 tctgaatagaaaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattttaaggacaaaag 39541774  T
Q  140 tgactaac 147  Q
    ||||||||    
T  39541773 tgactaac 39541766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 279
Target Start/End: Original strand, 26498650 - 26498769
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| |||| ||||||||| ||| | ||||||| ||||||||| ||||||  |||||| ||||| ||| |  ||||||||||||||||||||||||    
T  26498650 ttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggact--attttgcaatttatctgcattcag 26498747  T
Q  258 ggattaaagtgacgactcattt 279  Q
    ||| |||||||| |||||||||    
T  26498748 ggactaaagtgatgactcattt 26498769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 42453043 - 42453146
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||||||  ||||| |||||||||| ||||| ||||||  || ||| ||| |||||| |||| ||||||| |||||||||| |||| ||||    
T  42453043 attagtcactttaatccttgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgttagtca 42453142  T
Q  124 attt 127  Q
    ||||    
T  42453143 attt 42453146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 33343006 - 33343108
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| || |||||| |||||||||| ||||| |||||||||| ||| | | ||||||  |||  ||||||||||||||||| |||| ||||    
T  33343006 attagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgttagtca 33343105  T
Q  124 att 126  Q
    |||    
T  33343106 att 33343108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 36383166 - 36383102
Alignment:
Q  167 taaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggatt 231  Q
    |||| |||||||||||||||| |||||||||||||||| || ||||||||||  |||||||||||    
T  36383166 taaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattcaaggatt 36383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 15031188 - 15031291
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||| ||||||| ||  ||||||| ||| |||| ||||| ||||||| || ||| | | ||||||||||| |||||||||||||||||| |||| ||||    
T  15031188 attagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgttagtca 15031287  T
Q  124 attt 127  Q
    ||||    
T  15031288 attt 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 26498795 - 26498692
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||||||||| | ||||||||  |||| |||||||||| ||| | | |||||| |||| ||||| ||||||||||||  ||| ||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  124 attt 127  Q
    ||||    
T  26498695 attt 26498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 1426484 - 1426587
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||||||||| | |||||||| ||||| ||||  |||| ||| | | |||||| |||| ||| |||||||||||| | |||| ||||    
T  1426484 attagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgttagtca 1426583  T
Q  124 attt 127  Q
    ||||    
T  1426584 attt 1426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 39541743 - 39541700
Alignment:
Q  236 tttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  39541743 tttgcaatttatctgcattcagagactaaagtgacgactcattt 39541700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 48755327 - 48755430
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| || |||||| | ||| |||| ||||| |||||| ||| ||| | | || ||| |||| |||||||||||||||||| |||| ||||    
T  48755327 attagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgttagtca 48755426  T
Q  124 attt 127  Q
    ||||    
T  48755427 attt 48755430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 38498279 - 38498378
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc-gggattgaagtg 298  Q
    |||||||||||||||||||| |||||  ||   ||||||||||||| | |||||||||||| ||||||||| |||| ||| | |||| |||||| |||||    
T  38498279 aaattaactaacaaagtctacattca--gagactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtg 38498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 42453149 - 42453062
Alignment:
Q  197 actaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattc 286  Q
    |||||||| ||||||| |||||| ||| | ||| |  |||||||||||||| ||||||||  || ||||||||||||||||||| |||||    
T  42453149 actaaattgactaacagagtctacatttagggact--attttgcaatttatttgcattcatagactaaagtgacgactcattttctattc 42453062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 7300142 - 7300206
Alignment:
Q  115 tgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaac 179  Q
    |||||||||| |||| ||| |||||||||||||  ||||| |||| | |||||||||||||||||    
T  7300142 tgttggtcaaattcaaggactaaagtgactaacagagtctgcatttagggattaaattgactaac 7300206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 20759103 - 20759176
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||||| |||||||||||||| ||||||||| |  |||||||||||| |||||||||| ||| |||| |||| ||||    
T  20759103 aaattgactaacaaagtctacattcaaggact--attttgcaatttctctgcattcaaggactaaaatgactactc 20759176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 266
Target Start/End: Complemental strand, 26840194 - 26840030
Alignment:
Q  98 tccctgaatgtagactttgtt-ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagag 196  Q
    ||||||||| |||||| |||| ||| |||| || ||| |||||||||||||  ||| || ||||| ||| |||||| ||||||| ||||| || | | ||    
T  26840194 tccctgaatatagactctgtttggttaattccatggattaaagtgactaacagagtttatattcaaggactaaattaactaacggagtcttcaattaaag 26840095  T
Q  197 actaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaag 266  Q
    |||||||| |||   | |||||| |||||| ||   ||||||| ||||||||| |||||||| |||||||    
T  26840094 actaaattgact---agagtctacattcaaaga--ctattttgtaatttatctacattcaggaattaaag 26840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 15031397 - 15031330
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||| ||| |||| ||||||||| ||||||||||||| ||||||||| ||||||  |||||| |||||    
T  15031397 ttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattca 15031330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 21514744 - 21514847
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||| |||||  ||||  ||| ||||| |||||||||| ||  | | ||||||||||| ||||| |||||||||||| |||| || |    
T  21514744 attagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgttagtta 21514843  T
Q  124 attt 127  Q
    ||||    
T  21514844 attt 21514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 279
Target Start/End: Complemental strand, 20759104 - 20758985
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    |||| ||| |||| ||||||||  ||||||   |||| ||||||||| ||||| | ||||||||||||  ||   |||||| ||||||||||| |||||     
T  20759104 ttcagggactaaagtgactaacatagtctattctcagggactaaattgactaatagagtctatattca--gagactattttacaatttatctgtattcaa 20759007  T
Q  258 ggattaaagtgacgactcattt 279  Q
    ||| ||||||||||||| ||||    
T  20759006 ggactaaagtgacgacttattt 20758985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 41984905 - 41985042
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  ||||||   ||| |||||||||| | ||| | || ||| | |||||||| |||| ||| | |||| ||||||| |||| ||||    
T  41984905 attagtcactttagttcctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 41985004  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattca 161  Q
    |||||| ||| ||| |||||||||  |||||| |||||    
T  41985005 atttcaaggattaatgtgactaactgagtctaaattca 41985042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 43562602 - 43562643
Alignment:
Q  17 taggggaattagtcactttaatctctgaatggaaaatgagta 58  Q
    |||||||||||||||||||| ||||||||||| ||| |||||    
T  43562602 taggggaattagtcactttagtctctgaatgggaaaagagta 43562643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 14434743 - 14434666
Alignment:
Q  200 aaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||||||||||||||||||| |||||||||   | ||||||||| | |||||||| | ||| ||||||||| | ||||||    
T  14434743 aaattaactaacaaagtctacattcaagga--ctgttttgcaatatctctgcatttacggactaaagtgactattcattt 14434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 15031429 - 15031473
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||    
T  15031429 ttttgcaatttctctgcattcagagactaaagtgactactcattt 15031473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 26498618 - 26498578
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  26498618 ttttgcaatttctctgcattcagggactaaagtgactactc 26498578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 829 - 1022
Alignment:
Q  17 taggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttg 116  Q
    |||||||||| ||||||||| | ||||||||||||| ||| |||||| |||||||||| ||| | |||||||| |||| ||||| |||||||||||| |     
T  829 taggggaattggtcactttagtttctgaatggaaaaagagaagtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactcta 927  T
Q  117 ttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaac 211  Q
    || |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  928 ttagtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaac 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 7293 - 7486
Alignment:
Q  17 taggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttg 116  Q
    |||||||||| ||||||||| | ||||||||||||| ||| |||||| |||||||||| ||| | |||||||| |||| ||||| |||||||||||| |     
T  7293 taggggaattggtcactttagtttctgaatggaaaaagagaagtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactcta 7391  T
Q  117 ttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaac 211  Q
    || |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  7392 ttagtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaac 7486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 280
Target Start/End: Original strand, 969 - 1121
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||||||| |||| ||||||||||||||| |||||| ||| |||||||||||||||| ||| ||||||| ||||||||| | ||| ||||||||  ||||    
T  969 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 1068  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgactcatttt 280  Q
     |||   ||||||| ||||||| |||||||| ||| ||||||||| | |||||||    
T  1069 ggga--ctattttgtaatttatttgcattcaaggactaaagtgacaattcatttt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 280
Target Start/End: Original strand, 7433 - 7585
Alignment:
Q  126 ttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattca 225  Q
    |||||||| |||| ||||||||||||||| |||||| ||| |||||||||||||||| ||| ||||||| ||||||||| | ||| ||||||||  ||||    
T  7433 ttcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttca 7532  T
Q  226 aggattttattttgcaatttatctgcattcagggattaaagtgacgactcatttt 280  Q
     |||   ||||||| ||||||| |||||||| ||| ||||||||| | |||||||    
T  7533 ggga--ctattttgtaatttatttgcattcaaggactaaagtgacaattcatttt 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 937 - 997
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    |||| ||| |||| |||||||| |||||||||||||| || |||||| |||||| ||||||    
T  937 ttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtct 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 7401 - 7461
Alignment:
Q  158 ttcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtct 218  Q
    |||| ||| |||| |||||||| |||||||||||||| || |||||| |||||| ||||||    
T  7401 ttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtct 7461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 32092753 - 32092935
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    ||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||| | |||||||| |||| |||||||||||||||||| |||    
T  32092753 aggggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgt 32092852  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
    | |||||| ||||| | ||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||| |||||    
T  32092853 ttgtcaatctcaggaactaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggacta 32092935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 22093145 - 22092890
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    |||||||||| |||||||| |  ||||||||||||||| |||| || |||||||||| ||||| |||||||| |||| |||| ||||||||||| | |||    
T  22093145 aggggaattaatcactttagttcctgaatggaaaatgattagttactttagtccctgaatgtagagaaattgcaaaacagtctctgaatgtagattctgt 22093046  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    ||||||| |||||||| ||||||||| |||| |||||| ||||| ||| ||||||||| || | ||||| |||||||  |||||| | ||||||| ||||    
T  22093045 tggtcaaattcagggactaaagtgacaaacggagtctatattcagggactaaattgacgaatggagtctgcattcaggaactaaactgactaacagagtc 22092946  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactc 275  Q
    || ||||| |||   |||||| ||||||||||||| ||| ||| ||||||||||||||    
T  22092945 tacattcaggga--ctattttacaatttatctgcaatcaaggactaaagtgacgactc 22092890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 257
Target Start/End: Original strand, 39598585 - 39598738
Alignment:
Q  102 tgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaa 201  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||| ||| |||||||||||||| ||| ||||||||| ||||||    
T  39598585 tgaatgtagactttgttagtcaattttagggactaaagtgactaacggagtctacattcagggactaaattgactaacggagtatacattcagcgactaa 39598684  T
Q  202 attaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    ||| || ||||||||||| ||||| |||   |||||||||||||||||||||||||    
T  39598685 attgaccaacaaagtctacattcaggga--ctattttgcaatttatctgcattcag 39598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 24006874 - 24007133
Alignment:
Q  18 aggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgt 117  Q
    |||||||| |||||||||  | ||||||||| |||  | ||||||| |||||||||| ||| | |||||||| |||| |||||||||||||||||| |||    
T  24006874 aggggaatcagtcactttggtttctgaatgggaaaaaattagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgt 24006973  T
Q  118 tggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtc 217  Q
    |  |||||||||| || |||| ||| ||||  |||||||||||| | | || |||||  |||| | ||| ||||||  ||||||||| ||||||| ||||    
T  24006974 tactcaatttcagagactaaaatgattaacagagtctacattcaggtactacattgatcaacggaatctgcattcatggactaaattgactaacagagtc 24007073  T
Q  218 tatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    || ||||||  | | |||||| ||||||||||| ||||| ||| |||||| |||||||||||    
T  24007074 tacattcaa--agtctattttacaatttatctgtattcaaggactaaagtaacgactcattt 24007133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 270
Target Start/End: Original strand, 31499430 - 31499594
Alignment:
Q  104 aatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaat 203  Q
    |||||||| |||||||||||||||||||||  |||||||| ||  ||||||||||||| ||| |||||||||||||| ||||| |||||||| ||||||     
T  31499430 aatgtagattttgttggtcaatttcagggaccaaagtgacaaataaagtctacattcaaggactaaattgactaacggagtctgcattcagaaactaaaa 31499529  T
Q  204 taactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgac 270  Q
    | ||||||| | |||| ||||| |||   |||||| |||||||||| ||||||  ||||||||||||    
T  31499530 tgactaacagattctacattcaggga--ctattttacaatttatctacattcaaagattaaagtgac 31499594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 102 - 309
Target Start/End: Complemental strand, 31820115 - 31819910
Alignment:
Q  102 tgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaa 201  Q
    |||||||||| | |||| |||||||| ||||| |||||||| ||||| ||| ||||||||  || ||||||||||||  |||||| ||||||  ||||||    
T  31820115 tgaatgtagattctgttagtcaattttagggactaaagtgattaacggagtatacattcagagactaaattgactaagaaagtctgcattcaaggactaa 31820016  T
Q  202 attaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattttttattcgggattgaagtgacc 301  Q
    ||  ||||||| |||||| |||||  ||   |||||| ||||||||||||||| ||||| |||| |||||| || |||  ||||||||| | |||||||     
T  31820015 atggactaacagagtctacattcagtga--ctattttccaatttatctgcatttagggactaaaatgacgattcctttcctattcgggactaaagtgact 31819918  T
Q  302 gatctccc 309  Q
     |||||||    
T  31819917 aatctccc 31819910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 32092870 - 32092971
Alignment:
Q  167 taaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaag 266  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||| |||   |||||| ||||||||||||||||||||| |||||    
T  32092870 taaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcaggga--ctatttttcaatttatctgcattcagggactaaag 32092967  T
Q  267 tgac 270  Q
    ||||    
T  32092968 tgac 32092971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 8219304 - 8219215
Alignment:
Q  138 agtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaag 227  Q
    ||||||||||| |||| ||||||| |||||||||||||||||| ||||| |||||||| |||||||| ||||||| |||||| |||||||    
T  8219304 agtgactaacggagtccacattcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattcaag 8219215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 17914200 - 17914083
Alignment:
Q  76 atgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgac 175  Q
    ||||| |||||||| |||| |||   |||||||||||| | || |||||||| || || ||||||||||||| || |||||||| | ||  |||||||||    
T  17914200 atgtagagaaattgcaaaacagtttttgaatgtagactctattagtcaattttagtgattaaagtgactaacaaaatctacatttagggtctaaattgac 17914101  T
Q  176 taacgaagtctacattca 193  Q
    |||| || ||||||||||    
T  17914100 taacaaaatctacattca 17914083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 17914144 - 17914063
Alignment:
Q  164 gattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttat 247  Q
    ||||||| |||||||| || |||||||| || | ||||||| ||||||||| |||| |||||||||  ||||||||||||||||    
T  17914144 gattaaagtgactaacaaaatctacatttagggtctaaattgactaacaaaatctacattcaagga--ttattttgcaatttat 17914063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 39598726 - 39598683
Alignment:
Q  84 aaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    |||||| |||| ||||||||||||||||||||||||||||||||    
T  39598726 aaattgcaaaatagtccctgaatgtagactttgttggtcaattt 39598683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 32092973 - 32092903
Alignment:
Q  57 tagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaattt 127  Q
    ||||||| |||||||||| ||| | | |||||| |||| |||||||||||||||||| |||| ||||||||    
T  32092973 tagtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaattt 32092903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 32092829 - 32092785
Alignment:
Q  235 ttttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||    
T  32092829 ttttgcaatttctctgcattcagggactaaagtgactactcattt 32092785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 31820225 - 31820179
Alignment:
Q  23 aattagtcactttaatctctgaatggaaaatgagtagtcaccttagt 69  Q
    |||||||||||||||| ||||||||| |||| ||||||||| |||||    
T  31820225 aattagtcactttaatttctgaatgggaaataagtagtcactttagt 31820179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 266
Target Start/End: Original strand, 190174 - 190418
Alignment:
Q  20 gggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttg 119  Q
    |||||||||||| |||| || |||||||| ||| |||||||||  |||||| ||| ||| | |||||||| |||| |||| ||||||||||||| |||||    
T  190174 gggaattagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttg 190273  T
Q  120 gtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtcta 219  Q
    |||||||||||||| |||| ||| ||||  ||| |||||| | ||| |||||||||||||  |||||  ||||||  |||||||| |||||||||||||     
T  190274 gtcaatttcagggattaaattgattaacatagtttacatttagggactaaattgactaacagagtctgtattcaggaactaaattgactaacaaagtctg 190373  T
Q  220 tattcaaggattttattttgcaatttatctgcattcagggattaaag 266  Q
    |||| |  ||   ||||||||||||||||| ||||||||||||||||    
T  190374 tattta--gaaactattttgcaatttatctacattcagggattaaag 190418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 279
Target Start/End: Complemental strand, 24172 - 23918
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggt 121  Q
    |||||||||||||||||| |||||||||||| |||||||    |||||||||| ||| | |||||||| |||| | |||||||||||||| | |||||||    
T  24172 gaattagtcactttaatccctgaatggaaaa-gagtagttgttttagtccctgaatgcagagaaattgcaaaacaatccctgaatgtagattctgttggt 24074  T
Q  122 caatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctata 221  Q
    |||||||| |||  |||||||| ||  ||||||||||||| ||| ||||||||| |||  ||||| ||||||| ||||||||| ||||||  |||||| |    
T  24073 caatttcatggacaaaagtgacgaataaagtctacattcaaggactaaattgaccaacagagtctgcattcagggactaaattgactaacgtagtctaca 23974  T
Q  222 ttcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    |||  |||    ||||||||||||||||  ||||| ||| ||||| ||||||||||||    
T  23973 ttcgggga--ccattttgcaatttatctatattcaaggactaaagggacgactcattt 23918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 27486 - 27645
Alignment:
Q  21 ggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttgg 120  Q
    |||||||||||||||| || |||||| ||||||||||||| || |||| ||||| ||    |||||||| |||| |||| || |||||||||| ||||||    
T  27486 ggaattagtcactttagtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtctcttaatgtagactctgttgg 27585  T
Q  121 tcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacg 180  Q
    ||||||||| ||| ||||||||| ||||||||||||||||| | | ||||||||||||||    
T  27586 tcaatttcaaggactaaagtgacgaacgaagtctacattcaggaagtaaattgactaacg 27645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 314277 - 314126
Alignment:
Q  104 aatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaat 203  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||  | |||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  314277 aatgtagactctgttggttaatttcagggactaaagtgactaacagactctacattcagggactaaattgactaacggagtctgcattcagggactaaat 314178  T
Q  204 taactaacaaagtctatattcaaggattttattttgcaatttatctgcattcag 257  Q
    | ||||||| |||||| ||| | |||   |||||||||||| ||||||||||||    
T  314177 tgactaacagagtctacatttaggga--ctattttgcaattaatctgcattcag 314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 128083 - 127840
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  ||||||   ||| |||||||||| | ||| | || ||| | |||||||| |||| ||| | |||| ||||||| |||| ||||    
T  128083 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 127984  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaacaaagtctatatt 223  Q
    |||||| ||| ||| |||||||||  |||||| ||||  |||||||||||| ||||||||||| |||||||| ||||| || ||||||| ||| || |||    
T  127983 atttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 127884  T
Q  224 caaggattttattttgcaatttatctgcattcagggattaaagtga 269  Q
    ||  ||   |||||||||||||||||||||||| ||| ||||||||    
T  127883 ca--gaaactattttgcaatttatctgcattcatggactaaagtga 127840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 1629 - 1452
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| |  |||||||  ||| |||||||||| | ||||| || ||| | |||||||| |||| ||||| |||| ||||||| |||| ||||    
T  1629 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 1530  T
Q  124 atttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaa 201  Q
    |||||| ||| ||| ||||||||   |||||||||||| ||| |||||| ||||||||||||| ||||||||||||||    
T  1529 atttcaaggattaatgtgactaattgagtctacattcagggactaaattaactaacgaagtctgcattcagagactaa 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 1429 - 1393
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtga 269  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1429 tattttgcaatttatctgcatttagggactaaagtga 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 1503 - 1467
Alignment:
Q  182 agtctacattcagagactaaattaactaacaaagtct 218  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  1503 agtctacattcagggactaaattaactaacgaagtct 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 59711 - 59855
Alignment:
Q  30 cactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttca 129  Q
    ||||||| || || ||||| ||| | |||||||| |||||||||| ||| | |||||||| |||| || ||||||||||||||| |||| ||||||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaatttca 59810  T
Q  130 gggagtaaagtgactaacgaagtctacattcatggattaaattga 174  Q
    |||| |||| ||||||||| ||||| |||||| ||| ||||||||    
T  59811 gggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 269
Target Start/End: Complemental strand, 57670 - 57485
Alignment:
Q  82 agaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacga 181  Q
    |||||||| |||| ||| | |||| ||||||| |||| |||||||||| ||| ||| |||||||||  |||||| ||||| ||| |||||||| ||||||    
T  57670 agaaattgcaaaacagtgcttgaacgtagactctgttagtcaatttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacga 57571  T
Q  182 agtctacattcagagactaaattaactaacaaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtga 269  Q
    ||||| |||||||| ||||| || ||||||| ||| || |||||  ||   |||||| ||||||||||||||||| ||| ||||||||    
T  57570 agtctgcattcagatactaagttgactaacatagtatacattca--gaaactatttttcaatttatctgcattcatggactaaagtga 57485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 11855 - 11676
Alignment:
Q  19 ggggaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgtt 118  Q
    ||||||||| |||||||| | ||||||||| |||||||||||| | |||||||||| ||| | |||||||| |||| ||||| | ||  |||||| | ||    
T  11855 ggggaattaatcactttagtttctgaatgggaaatgagtagtcgctttagtccctgaatgcagagaaattgcaaaatagtccttaaa--tagactctctt 11758  T
Q  119 ggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagacta 200  Q
     |||||||| ||||| |||||||||||||  | | ||||||||  |||||||||| |||||  ||||||||||||| |||||    
T  11757 agtcaattttagggactaaagtgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggacta 11676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 11778 - 11824
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    ||||||||||||| |||||||||||||| ||||| ||| ||||||||    
T  11778 tattttgcaatttctctgcattcagggactaaagcgactactcattt 11824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 279
Target Start/End: Complemental strand, 15557 - 15391
Alignment:
Q  111 actttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggattaaattgactaacgaagtctacattcagagactaaattaactaa 210  Q
    |||||||| |||||||||||| | ||||  |||| ||  | ||||||||||  || ||||||| |||||| |||||||||||||||| |||||| |||||    
T  15557 actttgttagtcaatttcaggtactaaaacgactgacagaatctacattcagagactaaattggctaacggagtctacattcagagattaaattgactaa 15458  T
Q  211 caaagtctatattcaaggattttattttgcaatttatctgcattcagggattaaagtgacgactcattt 279  Q
    || |||||| |||||  ||   |||||| ||||||||||||||||| ||| ||||||||| ||||||||    
T  15457 cagagtctacattca--gagactattttacaatttatctgcattcaaggactaaagtgacaactcattt 15391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 15365 - 15468
Alignment:
Q  24 attagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtca 123  Q
    ||||||||||||| ||| |||||   |||||||| ||||| ||||||| || ||| | | ||||||||||| |||| ||||||||||||| |||| ||||    
T  15365 attagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttagtca 15464  T
Q  124 attt 127  Q
    ||||    
T  15465 attt 15468  T

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Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 72118 - 72008
Alignment:
Q  67 agtccctggatgtaaagaaattgtaaaagagtccctgaatgtagactttgttggtcaatttcagggagtaaagtgactaacgaagtctacattcatggat 166  Q
    |||||||| ||||  |||||||| |||| |||||||||||||||| |||| |||||||||||||||| |||| |||||||| |||| | |||||| |||     
T  72118 agtccctgaatgtgcagaaattgcaaaacagtccctgaatgtagattttgatggtcaatttcagggactaaattgactaacaaagtttgcattcagggac 72019  T
Q  167 taaattgacta 177  Q
    |||||||||||    
T  72018 taaattgacta 72008  T

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Target: scaffold0018; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 72192 - 72106
Alignment:
Q  22 gaattagtcactttaatctctgaatggaaaatgagtagtcaccttagtccctggatgtaaagaaattgtaaaagagtccctgaatgt 108  Q
    ||||||||||||||| || |||||||| |||  ||||||||| |||||||||| ||||  |||||||| |||| |||||||||||||    
T  72192 gaattagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtccctgaatgt 72106  T

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Target: scaffold0018; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 71980 - 71940
Alignment:
Q  233 tattttgcaatttatctgcattcagggattaaagtgacgac 273  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  71980 tattttgcaatttatctgcattcagggattaaagtgacgac 71940  T

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