View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16963_low_4 (Length: 270)
Name: NF16963_low_4
Description: NF16963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16963_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 32982110 - 32981851
Alignment:
| Q |
9 |
gacatcatcacctctgggcttatttatggttaatcatcttctgacttgccactgaagttttcttctttttcccctgattttgcttgtgtagattctaatt |
108 |
Q |
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| T |
32982110 |
gacatcatcacctctgggcttatttatggttaatcatcttctgacttgccactgaagttttcttctttttcccctgattttgcttgtgtagattctaatt |
32982011 |
T |
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| Q |
109 |
gaggttgaccatctacaagatgtccctggtccatacattcagataaagggtgtttctaaagatgctgtggcagcagcaggttcaatgcttaaattggatg |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32982010 |
gaggttgaccatctacaagatgtccctggtccatacattcagataaagggtgtttctaaagatgctgtggcagcagcaggttcgatgcttaaattggatg |
32981911 |
T |
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| Q |
209 |
gttcgtatactactaaggtattggcatttttgctttattttagtccctttcttttctctg |
268 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32981910 |
gttcatatactactaaggtattggcatttttgctttattttagtccctttcttttctctg |
32981851 |
T |
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