View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16964_low_12 (Length: 251)

Name: NF16964_low_12
Description: NF16964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16964_low_12
NF16964_low_12
[»] chr5 (50 HSPs)
chr5 (6-189)||(43599137-43599320)
chr5 (6-189)||(43604629-43604812)
chr5 (6-189)||(43610121-43610304)
chr5 (6-187)||(27450229-27450409)
chr5 (2-187)||(1456638-1456822)
chr5 (6-187)||(27445386-27445566)
chr5 (8-187)||(29402550-29402728)
chr5 (1-187)||(30631763-30631948)
chr5 (1-187)||(15045095-15045279)
chr5 (6-187)||(43592692-43592854)
chr5 (1-187)||(24136298-24136484)
chr5 (6-187)||(22536672-22536852)
chr5 (6-179)||(26177475-26177647)
chr5 (6-187)||(10592844-10593023)
chr5 (6-175)||(18442052-18442220)
chr5 (1-175)||(29719978-29720152)
chr5 (6-175)||(9789628-9789796)
chr5 (7-179)||(16407650-16407821)
chr5 (1-187)||(31180664-31180830)
chr5 (1-180)||(28807083-28807261)
chr5 (1-180)||(2785777-2785955)
chr5 (1-180)||(33768586-33768764)
chr5 (1-180)||(33791718-33791896)
chr5 (8-175)||(29722165-29722332)
chr5 (6-175)||(25077718-25077886)
chr5 (6-175)||(25135687-25135855)
chr5 (6-179)||(16409086-16409258)
chr5 (6-179)||(37560955-37561127)
chr5 (6-187)||(40379678-40379858)
chr5 (6-179)||(26170366-26170538)
chr5 (6-187)||(16546216-16546396)
chr5 (6-179)||(37556133-37556305)
chr5 (6-187)||(40381889-40382069)
chr5 (1-180)||(31396497-31396675)
chr5 (1-180)||(31401354-31401532)
chr5 (6-187)||(16543994-16544174)
chr5 (64-175)||(29752267-29752377)
chr5 (22-179)||(9352816-9352972)
chr5 (111-179)||(15465048-15465116)
chr5 (111-176)||(36931855-36931920)
chr5 (71-175)||(29751608-29751711)
chr5 (130-180)||(14520796-14520846)
chr5 (6-103)||(38219849-38219946)
chr5 (144-187)||(43625605-43625648)
chr5 (130-182)||(12083656-12083708)
chr5 (1-57)||(29751559-29751615)
chr5 (130-179)||(11916453-11916502)
chr5 (138-175)||(35388196-35388233)
chr5 (1-57)||(35388113-35388169)
chr5 (111-151)||(25412396-25412436)
[»] chr4 (38 HSPs)
chr4 (6-188)||(51520870-51521051)
chr4 (2-187)||(9223899-9224083)
chr4 (2-187)||(9228686-9228870)
chr4 (1-187)||(24742392-24742577)
chr4 (6-187)||(56141511-56141692)
chr4 (1-187)||(3814421-3814605)
chr4 (1-187)||(5733061-5733247)
chr4 (1-148)||(18712294-18712440)
chr4 (1-187)||(18856124-18856309)
chr4 (1-180)||(45347324-45347502)
chr4 (1-187)||(29761073-29761239)
chr4 (6-187)||(8392982-8393162)
chr4 (1-179)||(13992693-13992870)
chr4 (6-175)||(7122279-7122447)
chr4 (6-175)||(7124501-7124669)
chr4 (6-175)||(31495721-31495889)
chr4 (6-187)||(8395191-8395371)
chr4 (6-179)||(28467986-28468158)
chr4 (7-187)||(5135649-5135829)
chr4 (7-187)||(5137875-5138055)
chr4 (112-187)||(18860446-18860521)
chr4 (1-93)||(45356891-45356983)
chr4 (111-179)||(31985136-31985204)
chr4 (42-180)||(5148157-5148294)
chr4 (127-180)||(8689044-8689097)
chr4 (128-180)||(5143807-5143859)
chr4 (130-182)||(16628351-16628403)
chr4 (130-182)||(38151916-38151968)
chr4 (131-182)||(3778116-3778167)
chr4 (130-182)||(16622772-16622824)
chr4 (129-180)||(5268699-5268750)
chr4 (130-181)||(10047932-10047983)
chr4 (130-180)||(6742896-6742946)
chr4 (130-180)||(54867745-54867795)
chr4 (130-181)||(9194164-9194216)
chr4 (130-176)||(36314715-36314761)
chr4 (130-176)||(36328924-36328970)
chr4 (130-176)||(5396176-5396221)
[»] chr8 (33 HSPs)
chr8 (1-188)||(30656097-30656283)
chr8 (1-187)||(10683739-10683924)
chr8 (1-187)||(18852627-18852812)
chr8 (2-187)||(7289427-7289612)
chr8 (1-187)||(6311750-6311935)
chr8 (1-187)||(36979829-36980014)
chr8 (1-187)||(4759534-4759719)
chr8 (1-187)||(18870021-18870206)
chr8 (1-187)||(25327664-25327849)
chr8 (1-187)||(33037287-33037472)
chr8 (1-187)||(39784325-39784510)
chr8 (6-187)||(3439088-3439267)
chr8 (1-125)||(10688661-10688784)
chr8 (1-187)||(1261414-1261600)
chr8 (8-179)||(2627327-2627497)
chr8 (6-175)||(26288336-26288504)
chr8 (6-175)||(26301593-26301761)
chr8 (6-175)||(26313587-26313755)
chr8 (6-187)||(42575728-42575909)
chr8 (6-189)||(15290141-15290324)
chr8 (6-189)||(15470510-15470693)
chr8 (22-175)||(7412787-7412939)
chr8 (1-180)||(35745793-35745971)
chr8 (71-175)||(31042921-31043024)
chr8 (130-187)||(10688618-10688675)
chr8 (6-125)||(25689604-25689721)
chr8 (130-187)||(25689561-25689618)
chr8 (130-180)||(5701959-5702009)
chr8 (130-179)||(4456575-4456624)
chr8 (129-179)||(19175233-19175283)
chr8 (130-180)||(23799099-23799149)
chr8 (111-145)||(11383406-11383440)
chr8 (7-57)||(31043017-31043067)
[»] chr3 (71 HSPs)
chr3 (1-187)||(28501152-28501337)
chr3 (1-187)||(28503319-28503504)
chr3 (1-187)||(40372256-40372441)
chr3 (1-187)||(7167697-7167882)
chr3 (1-187)||(22172662-22172847)
chr3 (1-187)||(8477817-8478002)
chr3 (1-187)||(27352081-27352266)
chr3 (1-187)||(18656843-18657029)
chr3 (1-141)||(2671111-2671250)
chr3 (6-188)||(54634709-54634890)
chr3 (6-187)||(6716085-6716265)
chr3 (7-179)||(1306424-1306595)
chr3 (1-190)||(8738539-8738708)
chr3 (1-190)||(9090777-9090946)
chr3 (6-190)||(4601147-4601331)
chr3 (1-180)||(8512642-8512820)
chr3 (1-179)||(2672427-2672604)
chr3 (6-187)||(4598926-4599107)
chr3 (6-187)||(25637013-25637193)
chr3 (1-180)||(8517522-8517700)
chr3 (8-175)||(800698-800864)
chr3 (11-187)||(3617034-3617209)
chr3 (6-179)||(23198349-23198521)
chr3 (6-179)||(23200548-23200720)
chr3 (22-179)||(26928089-26928245)
chr3 (1-180)||(32475886-32476064)
chr3 (1-180)||(32480744-32480922)
chr3 (1-179)||(2676583-2676760)
chr3 (6-190)||(10208775-10208959)
chr3 (1-180)||(24968519-24968697)
chr3 (6-175)||(10055817-10055986)
chr3 (6-175)||(10058039-10058208)
chr3 (6-175)||(10060261-10060430)
chr3 (6-175)||(10062483-10062652)
chr3 (6-175)||(10064705-10064874)
chr3 (6-175)||(10066927-10067096)
chr3 (6-187)||(10210978-10211159)
chr3 (22-179)||(33386146-33386302)
chr3 (110-179)||(7782634-7782703)
chr3 (42-179)||(37408045-37408180)
chr3 (42-179)||(37726154-37726290)
chr3 (6-125)||(6718331-6718449)
chr3 (22-179)||(27453416-27453572)
chr3 (111-182)||(36029640-36029711)
chr3 (130-182)||(30709264-30709316)
chr3 (128-179)||(27974442-27974493)
chr3 (128-179)||(32143868-32143919)
chr3 (6-125)||(45282628-45282746)
chr3 (130-180)||(21711768-21711818)
chr3 (130-187)||(6718288-6718345)
chr3 (22-103)||(32143782-32143863)
chr3 (130-187)||(45282585-45282642)
chr3 (130-182)||(16264896-16264948)
chr3 (110-180)||(27038588-27038658)
chr3 (130-180)||(39032025-39032075)
chr3 (130-187)||(16498637-16498694)
chr3 (130-175)||(27027273-27027318)
chr3 (130-175)||(40734087-40734132)
chr3 (130-182)||(35926057-35926108)
chr3 (137-180)||(1730916-1730959)
chr3 (130-181)||(48438782-48438833)
chr3 (128-174)||(27985971-27986017)
chr3 (130-180)||(40592252-40592302)
chr3 (130-181)||(24694654-24694706)
chr3 (130-175)||(40735018-40735063)
chr3 (136-181)||(47923326-47923371)
chr3 (6-57)||(7782552-7782603)
chr3 (129-175)||(40845220-40845266)
chr3 (22-103)||(27986022-27986103)
chr3 (130-159)||(43404486-43404515)
chr3 (111-151)||(9634816-9634856)
[»] chr7 (44 HSPs)
chr7 (2-187)||(12406673-12406857)
chr7 (7-188)||(20357027-20357207)
chr7 (1-188)||(2058420-2058605)
chr7 (2-188)||(4873537-4873722)
chr7 (1-187)||(21640238-21640423)
chr7 (1-187)||(24023819-24024004)
chr7 (2-187)||(31109070-31109255)
chr7 (1-175)||(24789439-24789612)
chr7 (2-187)||(12397321-12397492)
chr7 (6-179)||(18414094-18414266)
chr7 (6-187)||(20343500-20343680)
chr7 (1-179)||(21811747-21811924)
chr7 (6-187)||(6592741-6592921)
chr7 (1-179)||(21646457-21646634)
chr7 (6-176)||(43504540-43504709)
chr7 (6-179)||(39730942-39731114)
chr7 (6-187)||(6594957-6595137)
chr7 (6-187)||(32060708-32060888)
chr7 (6-179)||(18409218-18409390)
chr7 (1-180)||(24265684-24265862)
chr7 (22-179)||(48408407-48408563)
chr7 (1-180)||(16880475-16880653)
chr7 (1-180)||(16885330-16885508)
chr7 (6-187)||(1532884-1533084)
chr7 (1-180)||(24260828-24261006)
chr7 (6-187)||(18392600-18392780)
chr7 (22-187)||(25767381-25767540)
chr7 (110-187)||(1562510-1562587)
chr7 (111-179)||(47264190-47264258)
chr7 (42-179)||(2479815-2479951)
chr7 (111-179)||(44847628-44847696)
chr7 (111-180)||(21983790-21983859)
chr7 (42-179)||(21989387-21989522)
chr7 (130-182)||(79955-80007)
chr7 (6-78)||(1562407-1562479)
chr7 (6-57)||(18389164-18389215)
chr7 (130-180)||(46515809-46515860)
chr7 (129-174)||(49092237-49092282)
chr7 (131-187)||(18390506-18390562)
chr7 (111-145)||(4509335-4509369)
chr7 (111-145)||(4511177-4511211)
chr7 (111-145)||(6431467-6431501)
chr7 (111-145)||(14070348-14070382)
chr7 (111-145)||(14380376-14380410)
[»] chr6 (48 HSPs)
chr6 (1-187)||(11857382-11857567)
chr6 (1-187)||(14741926-14742111)
chr6 (2-187)||(22010189-22010373)
chr6 (19-187)||(30125018-30125185)
chr6 (1-187)||(6438898-6439083)
chr6 (1-188)||(14737084-14737251)
chr6 (6-187)||(16578921-16579101)
chr6 (6-187)||(16616279-16616459)
chr6 (1-187)||(5674229-5674415)
chr6 (1-188)||(5266487-5266654)
chr6 (12-175)||(27647480-27647642)
chr6 (6-187)||(16554454-16554634)
chr6 (6-187)||(16631010-16631190)
chr6 (6-179)||(22709464-22709636)
chr6 (7-179)||(2171924-2172095)
chr6 (6-187)||(6136367-6136547)
chr6 (1-180)||(16839145-16839323)
chr6 (1-180)||(33329940-33330118)
chr6 (6-188)||(25420796-25420977)
chr6 (1-175)||(411698-411872)
chr6 (1-180)||(5343879-5344057)
chr6 (1-180)||(33335437-33335615)
chr6 (6-187)||(33342507-33342688)
chr6 (1-175)||(3073157-3073330)
chr6 (7-187)||(6026834-6027013)
chr6 (1-180)||(6005821-6005999)
chr6 (6-175)||(34166678-34166847)
chr6 (6-175)||(13150861-13151030)
chr6 (6-175)||(34164456-34164625)
chr6 (1-93)||(28155164-28155256)
chr6 (22-175)||(23896792-23896944)
chr6 (111-175)||(26253602-26253666)
chr6 (110-175)||(6097908-6097973)
chr6 (132-180)||(28155097-28155145)
chr6 (6-125)||(16652759-16652877)
chr6 (130-180)||(5016976-5017026)
chr6 (22-179)||(5756960-5757116)
chr6 (130-180)||(31085953-31086003)
chr6 (130-187)||(16652716-16652773)
chr6 (110-175)||(34151840-34151905)
chr6 (130-180)||(24714938-24714989)
chr6 (6-57)||(25421020-25421071)
chr6 (130-180)||(18234650-18234700)
chr6 (6-57)||(6097826-6097877)
chr6 (135-182)||(21272467-21272514)
chr6 (130-188)||(5571748-5571806)
chr6 (130-159)||(603772-603801)
chr6 (111-151)||(5413942-5413982)
[»] chr2 (28 HSPs)
chr2 (1-187)||(9295862-9296047)
chr2 (1-187)||(11098387-11098572)
chr2 (1-187)||(14291940-14292125)
chr2 (2-187)||(39811477-39811661)
chr2 (8-179)||(25410087-25410257)
chr2 (7-179)||(3492197-3492368)
chr2 (6-187)||(12647787-12647967)
chr2 (6-175)||(4484742-4484910)
chr2 (7-179)||(30832930-30833101)
chr2 (6-179)||(32289157-32289329)
chr2 (107-187)||(44310471-44310551)
chr2 (1-180)||(19344824-19345002)
chr2 (111-187)||(32247276-32247352)
chr2 (8-175)||(6266287-6266453)
chr2 (1-180)||(19349682-19349860)
chr2 (22-179)||(40739292-40739448)
chr2 (130-182)||(8389629-8389681)
chr2 (130-182)||(10706731-10706783)
chr2 (128-180)||(36757425-36757477)
chr2 (130-181)||(21630511-21630562)
chr2 (128-179)||(28258678-28258729)
chr2 (130-181)||(39483443-39483494)
chr2 (130-180)||(33528105-33528155)
chr2 (136-180)||(20522794-20522838)
chr2 (130-182)||(23077950-23078002)
chr2 (1-57)||(32247188-32247244)
chr2 (22-103)||(28258734-28258815)
chr2 (130-182)||(13569896-13569948)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-187)||(3337-3522)
[»] scaffold0135 (1 HSPs)
scaffold0135 (2-187)||(34554-34738)
[»] chr1 (33 HSPs)
chr1 (1-187)||(41391001-41391185)
chr1 (1-187)||(39445897-39446082)
chr1 (1-187)||(1054514-1054699)
chr1 (1-187)||(44023377-44023562)
chr1 (1-175)||(20622635-20622808)
chr1 (1-180)||(25439406-25439584)
chr1 (1-190)||(24793663-24793832)
chr1 (1-180)||(25444599-25444777)
chr1 (6-187)||(44203218-44203398)
chr1 (1-103)||(24786908-24787010)
chr1 (1-179)||(51764999-51765176)
chr1 (6-187)||(9036003-9036183)
chr1 (7-179)||(19360921-19361092)
chr1 (7-175)||(19365781-19365948)
chr1 (1-187)||(21053540-21053726)
chr1 (1-175)||(40281971-40282145)
chr1 (1-175)||(9986798-9986971)
chr1 (1-103)||(41398656-41398758)
chr1 (1-180)||(43987956-43988134)
chr1 (71-179)||(24202260-24202367)
chr1 (130-187)||(41398764-41398821)
chr1 (111-175)||(13604108-13604172)
chr1 (111-179)||(21536121-21536189)
chr1 (130-180)||(13598967-13599017)
chr1 (187-233)||(16647854-16647900)
chr1 (111-180)||(26644381-26644450)
chr1 (130-180)||(37070334-37070384)
chr1 (130-187)||(13659840-13659897)
chr1 (130-179)||(3282273-3282322)
chr1 (1-57)||(24202360-24202416)
chr1 (130-180)||(16124188-16124238)
chr1 (130-167)||(29652381-29652418)
chr1 (110-142)||(1192296-1192328)
[»] scaffold0286 (1 HSPs)
scaffold0286 (7-179)||(21948-22119)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-187)||(760-945)
[»] scaffold0188 (1 HSPs)
scaffold0188 (8-179)||(17440-17610)
[»] scaffold0665 (1 HSPs)
scaffold0665 (1-188)||(8107-8274)
[»] scaffold0491 (2 HSPs)
scaffold0491 (6-179)||(11573-11744)
scaffold0491 (6-179)||(9128-9299)
[»] scaffold0565 (1 HSPs)
scaffold0565 (6-188)||(3005-3186)
[»] scaffold0674 (1 HSPs)
scaffold0674 (6-187)||(4130-4310)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-187)||(176450-176635)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-180)||(13791-13969)
scaffold0197 (1-180)||(18671-18849)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-180)||(1746-1924)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-180)||(148451-148629)
[»] scaffold1455 (1 HSPs)
scaffold1455 (112-189)||(1707-1784)
[»] scaffold0137 (1 HSPs)
scaffold0137 (6-187)||(5859-6040)
[»] scaffold1519 (1 HSPs)
scaffold1519 (22-151)||(519-647)
[»] scaffold0140 (1 HSPs)
scaffold0140 (111-179)||(7920-7988)
[»] scaffold0510 (1 HSPs)
scaffold0510 (22-175)||(1096-1248)
[»] scaffold0087 (2 HSPs)
scaffold0087 (22-179)||(43443-43599)
scaffold0087 (128-180)||(36332-36384)
[»] scaffold0006 (4 HSPs)
scaffold0006 (111-175)||(132765-132829)
scaffold0006 (130-180)||(6252-6302)
scaffold0006 (130-180)||(3060-3110)
scaffold0006 (130-187)||(149601-149658)
[»] scaffold0098 (1 HSPs)
scaffold0098 (128-179)||(45744-45795)
[»] scaffold0036 (1 HSPs)
scaffold0036 (130-182)||(86153-86206)
[»] scaffold0466 (1 HSPs)
scaffold0466 (111-145)||(6750-6784)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 43599137 - 43599320
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43599137 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 43599236  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43599237 ccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 43604629 - 43604812
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43604629 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 43604728  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604729 ccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43604812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 43610121 - 43610304
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43610121 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 43610220  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43610221 ccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43610304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 27450229 - 27450409
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  27450229 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg-cc 27450327  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450328 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 1456822 - 1456638
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  1456822 gacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactagctcacg 1456723  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456722 g-ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 27445386 - 27445566
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  27445386 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg-cc 27445484  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27445485 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 29402728 - 29402550
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || |    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatgg-ccac 29402630  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29402629 ttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30631763 - 30631948
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcac 30631862  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631863 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15045095 - 15045279
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  15045095 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 15045194  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||  |  | ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15045195 ggcatc--tcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 43592692 - 43592854
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43592692 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 43592791  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592792 ccttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24136298 - 24136484
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  24136298 tgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcac 24136397  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 187  Q
    || |  |  ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  24136398 gg-catcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 22536672 - 22536852
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  || || ||||||||| ||  ||||||| |||||||||||| |    
T  22536672 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcac 22536771  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536772 ccc-gaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 26177647 - 26177475
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   |||||||||||||||||||| ||||||  |||||||||||  ||||||||| ||||||||||      
T  26177647 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 26177548  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |   |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26177547 cac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 10593023 - 10592844
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| ||||||||| ||  ||||||| ||| |||||||| |    
T  10593023 agtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggcac 10592924  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  | |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10592923 cc--ggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 18442052 - 18442220
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||  |||||||||||  ||||||||| ||||||||||      
T  18442052 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 18442151  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    | | |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  18442152 cat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 29720152 - 29719978
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctca 99  Q
    |||| ||||||||||| ||| ||||||||||||||||| |  ||||||||||||||||||||  |||||  |||||||||||  |||||| |||||||||    
T  29720152 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctca 29720053  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||| ||   |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29720052 cggcaccac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 9789628 - 9789796
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||  |||||||||||  ||||||||| ||||||||||      
T  9789628 agtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 9789727  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |   |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  9789728 cac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 16407821 - 16407650
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||  |||||||||||  ||||||||| ||||||||||  |    
T  16407821 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 16407722  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
        |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16407721 aca-aaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 31180664 - 31180830
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31180664 tgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 31180763  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | | || |||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180764 gacacc-ttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 28807261 - 28807083
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||| ||  ||||||||| | |||||    
T  28807261 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctca 28807162  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  | | |||||||||||||  |||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  28807161 cggcatc--tcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 2785777 - 2785955
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  2785777 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 2785876  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  2785877 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 33768586 - 33768764
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  33768586 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33768685  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33768686 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 33791718 - 33791896
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  33791718 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33791817  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33791818 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 29722332 - 29722165
Alignment:
Q  8 tccttatcagggatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    ||||||||| ||| ||||||||||||||||| |  ||||||||||||||||||||  |||||  |||||||||||  | |||| |||||||||| || ||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
       |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29722232 ac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 25077886 - 25077718
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||  |||||||||    ||| ||| | |||||||||||     
T  25077886 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggca 25077787  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||  |  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25077786 cc--tccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 25135855 - 25135687
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||  |||||||||    ||| ||| | |||||||||||     
T  25135855 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggca 25135756  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||  |  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25135755 cc--tccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 16409258 - 16409086
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||  ||| |||||||  | ||||||| |||||||| |      
T  16409258 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacat 16409159  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16409158 caca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 37561127 - 37560955
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||| |  | |  |||| | |||||||||     
T  37561127 agtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggca 37561028  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
     |  | | |||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561027 tc--tcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 40379858 - 40379678
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  ||||||| | |||||||||||     
T  40379858 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggca 40379759  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379758 cc--tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 26170538 - 26170366
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   |||  ||||||||||||||| ||||||  |||||||||||  ||||||||| ||||||||||      
T  26170538 agtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 26170439  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  26170438 caca-aaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 16546396 - 16546216
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  ||||||| | |||||||||||     
T  16546396 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggca 16546297  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546296 cc--tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 37556305 - 37556133
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctcacggcc 104  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||| |  | |  ||||| | ||||||||     
T  37556305 agtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggca 37556206  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
     |  | | |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37556205 tc--tcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 40382069 - 40381889
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  ||||||| | |||||||||||     
T  40382069 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggca 40381970  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381969 cc--tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31396675 - 31396497
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| || ||||||| | ||||| |||||||||||||||||||||||||||||||  |||||||| || ||| |||||| |||||||    
T  31396675 tgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 31396576  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| |  |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  31396575 ctgcctc--tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31401532 - 31401354
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||  |||||||| || ||| |||||| |||||||    
T  31401532 tgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 31401433  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| |  |   |||||||||||||  | |||||||| ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31401432 ctgcctc--tccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 16544174 - 16543994
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  |||| || | |||||||| ||     
T  16544174 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagca 16544075  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544074 cc--tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 29752267 - 29752377
Alignment:
Q  64 atcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 163  Q
    ||||| ||||||||||||  ||||||| ||||||||||||  |   |||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  164 acaaatttgaag 175  Q
    ||||||||||||    
T  29752366 acaaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 9352972 - 9352816
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgt 119  Q
    ||||||| |||||||||   ||||||||||||||||| ||  ||||| |||||||||| |  ||||||||| ||||||||||    ||   |||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggca---ttacaaaatcgtgt 9352876  T
Q  120 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||    
T  9352875 cacgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 15465048 - 15465116
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15465048 aaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 36931920 - 36931855
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 176  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  36931920 aaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 29751608 - 29751711
Alignment:
Q  71 cacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 170  Q
    |||||||||||  ||||||| |||||||||||| ||   |||||||||||  ||||||||| || |||||||||||| ||||||||||||||||||||||    
T  29751608 cacgatttggcaccctgcaacctagctcacggcaccac-gaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaatt 29751706  T
Q  171 tgaag 175  Q
    |||||    
T  29751707 tgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 14520796 - 14520846
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 38219849 - 38219946
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggc 103  Q
    ||||||||||| ||| ||||||| |||||||||   ||||||||||| |||||||||||||||  |||||||||||  ||| ||||| ||||||||||    
T  38219849 agtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggc 38219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  144 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 12083708 - 12083656
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatat 12083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29751559 - 29751615
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  29751559 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 11916502 - 11916453
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  138 tcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35388113 - 35388169
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    |||| ||||||||||| |||||||||||||||||||||   ||||||||||| ||||    
T  35388113 tgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 25412436 - 25412396
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 151  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  25412436 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 51520870 - 51521051
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  51520870 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg-cc 51520968  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520969 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 51521051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 9224083 - 9223899
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9224083 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacg 9223984  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9223983 g-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 9228870 - 9228686
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  9228870 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacgagctcacg 9228771  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228770 g-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24742392 - 24742577
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24742392 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 24742491  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742492 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 56141692 - 56141511
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgattt-ggcgtcctgcaaactagctcacggcc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  56141692 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctcacgacc 56141593  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56141592 cc-tccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3814421 - 3814605
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||  |||||||||||||| |||||||| ||| ||    
T  3814421 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttgcttac 3814519  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814520 ggtcac-ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 5733061 - 5733247
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagc-tca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||    
T  5733061 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 5733160  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||| | ||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5733161 cgg-caccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 18712440 - 18712294
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18712440 tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 18712341  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 148  Q
    || || ||||||||||||||||||||||||||||||||||||||||||    
T  18712340 gg-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18856124 - 18856309
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| || ||| ||||||| | ||||    
T  18856124 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctca 18856223  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18856224 cggcacc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 45347502 - 45347324
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  45347502 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 45347403  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |  |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45347402 cggcatc--tctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 29761073 - 29761239
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29761073 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 29761172  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||| ||       |||             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29761173 ggcacc-------tcg-------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaaca 29761239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 8393162 - 8392982
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  8393162 agtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 8393063  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8393062 tcc--gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 13992693 - 13992870
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| | | |||||||||||||||||   ||||||||||||||||||||| |||||  |||||||||||  ||||||||| |||||||    
T  13992693 tgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcac 13992792  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    | |  |   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13992793 gacatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 7122447 - 7122279
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||||||||     
T  7122447 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 7122348  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7122347 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 7124669 - 7124501
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||||||||     
T  7124669 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 7124570  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7124569 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 31495721 - 31495889
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||  |||||||||||  ||||||||| ||||||||||      
T  31495721 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 31495820  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |   |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  31495821 cac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 8395371 - 8395191
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| || |||||||||||| || | ||||| | ||||||||    ||||||| | |||||||||||     
T  8395371 agtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcacggca 8395272  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395271 tcc--gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 28468158 - 28467986
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    |||||||||||  || |||||||||||||||||   |||||||||||||||| ||||||||||  |||||||||||  ||||||||| ||||||||||      
T  28468158 agtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 28468059  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  28468058 caca-aaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 5135829 - 5135649
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||     
T  5135829 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 5135730  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  ||||||| |||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135729 tcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 5138055 - 5137875
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||     
T  5138055 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 5137956  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  ||||||| |||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137955 tcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 18860446 - 18860521
Alignment:
Q  112 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45356983 - 45356891
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaact 93  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||    
T  45356983 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaact 45356891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 31985204 - 31985136
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  31985204 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 5148157 - 5148294
Alignment:
Q  42 aatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgtcacgatgccaaaatcgtgtc 139  Q
    |||||||||| | |||| ||| ||||| |||||||| | |  |||||||||||||||||| |    |||  ||||||||||||| ||  |||||||||||    
T  5148157 aatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaactagctcacgaca---ttgcaaaatcgtgtcacggtgataaaatcgtgtc 5148253  T
Q  140 acgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  5148254 acgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 8689097 - 8689044
Alignment:
Q  127 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 5143807 - 5143859
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 16628403 - 16628351
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 16628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 38151968 - 38151916
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 38151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 3778116 - 3778167
Alignment:
Q  131 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 3778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 16622824 - 16622772
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatat 16622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 5268750 - 5268699
Alignment:
Q  129 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 10047932 - 10047983
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 181  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 6742946 - 6742896
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 54867745 - 54867795
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 9194164 - 9194216
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 181  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 36314761 - 36314715
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 176  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 36328970 - 36328924
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 176  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 5396221 - 5396176
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 176  Q
    |||||||| |||||||||||||||||| || ||||||||||||||||    
T  5396221 aaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 9e-88; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 30656097 - 30656283
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30656097 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 30656196  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30656197 gg-caccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 30656283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 10683924 - 10683739
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10683924 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 10683825  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683824 gg-caccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18852812 - 18852627
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18852812 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 18852713  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18852712 gg-caccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18852627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 7289612 - 7289427
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |    
T  7289612 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaactagctcatg 7289513  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  7289512 gctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatatcaaca 7289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 6311750 - 6311935
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6311750 tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 6311849  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  6311850 gg-caccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaataacaaca 6311935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 36979829 - 36980014
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  36979829 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcac 36979928  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979929 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 36980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 4759719 - 4759534
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4759719 tgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 4759620  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4759619 gg-cacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18870206 - 18870021
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18870206 tgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 18870107  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     | |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870106 -gacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 25327849 - 25327664
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25327849 tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctcac 25327750  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     | || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327749 ag-ccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 33037472 - 33037287
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  33037472 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcac 33037373  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037372 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 39784510 - 39784325
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctca 99  Q
    |||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| | ||||    
T  39784510 tgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 39784411  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39784410 cggcacc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 3439267 - 3439088
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||  |||||||| ||  ||||||| |||||||||||| |    
T  3439267 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcac 3439169  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  3439168 ccc-gaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10688784 - 10688661
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10688784 tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 10688685  T
Q  101 ggcccccttgaaatcgtgtcacgat 125  Q
    || | ||||||||||||||||||||    
T  10688684 gg-caccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 1261600 - 1261414
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  1261600 tgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcac 1261501  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 187  Q
    || |  |  |||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||||||| || ||||||||||    
T  1261500 gg-catcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 2627497 - 2627327
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    ||||||||| ||| |||||||||||||||||   ||||||||||||||||||||| |||||  |||||||||||  | ||||||| |||||||||   |     
T  2627497 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatca 2627398  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
      |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2627397 c-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 26288336 - 26288504
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||||||||      
T  26288336 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26288435  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26288436 caca-aaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 26301593 - 26301761
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||||||||      
T  26301593 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26301692  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26301693 caca-aaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 26313587 - 26313755
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||||||||      
T  26313587 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26313686  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26313687 caca-aaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 42575728 - 42575909
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  42575728 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggc 42575827  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
      ||  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575828 atcc--gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 15290324 - 15290141
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  15290324 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 15290225  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
      ||  ||||||||||| | || ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  15290224 atcc--gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacaca 15290141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 15470693 - 15470510
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  15470693 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 15470594  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
      ||  ||||||||||| | || ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  15470593 atcc--gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacaca 15470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 7412787 - 7412939
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || ||||||||||||| |  ||||||||| ||||||||||      ||| ||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaa-tcgtgtca 7412885  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7412886 cgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 35745793 - 35745971
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || |||  ||||| | |||||    
T  35745793 tgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctca 35745892  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  35745893 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 31043024 - 31042921
Alignment:
Q  71 cacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 170  Q
    |||||||||||  ||||||||| |||||||||| ||   |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31043024 cacgatttggcaccctgcaaaccagctcacggcaccac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagaccacaaatt 31042926  T
Q  171 tgaag 175  Q
    |||||    
T  31042925 tgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 10688675 - 10688618
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 25689721 - 25689604
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||| |||||||||||  ||||| ||||||||| ||  ||||||| |||||||||||| |    
T  25689721 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggcac 25689622  T
Q  106 ccttgaaatcgtgtcacgat 125  Q
    ||  ||||||||||||||||    
T  25689621 cc--gaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 25689618 - 25689561
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 4456575 - 4456624
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 19175283 - 19175233
Alignment:
Q  129 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  19175283 aaaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 23799149 - 23799099
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 11383440 - 11383406
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  11383440 aaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 31043067 - 31043017
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    |||||||||  ||| |||||||||||||||||  |||||||||||||||||    
T  31043067 gtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgattt 31043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 28501337 - 28501152
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  28501337 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcac 28501238  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28501237 gg-ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 28503504 - 28503319
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  28503504 tgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagctcac 28503405  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28503404 gg-ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 40372441 - 40372256
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40372441 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 40372342  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372341 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 7167697 - 7167882
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7167697 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 7167796  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7167797 gg-caccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 22172847 - 22172662
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  22172847 tgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 22172748  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172747 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8477817 - 8478002
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  8477817 tgaccagtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcac 8477916  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  8477917 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaatgtcaaca 8478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 27352266 - 27352081
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||    
T  27352266 tgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcac 27352167  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  27352166 gg-caccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagctaatatcaaca 27352081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18656843 - 18657029
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagc-tca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||    
T  18656843 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 18656942  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||| | ||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18656943 cgg-caccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2671250 - 2671111
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  2671250 tgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcac 2671151  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcac 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  2671150 gg-caccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 54634890 - 54634709
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  ||||| ||||||||| ||  |||||||  ||||||||||| |    
T  54634890 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcac 54634791  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    ||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  54634790 ccc-gaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacac 54634709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 6716265 - 6716085
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  |||||  |||||||| ||  ||||||| |||||||||||| |    
T  6716265 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6716166  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716165 ccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 1306424 - 1306595
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| |||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||  ||||||||| |||||||| | ||    
T  1306424 gtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacacc 1306523  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
       |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  1306524 ac-gaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 8738708 - 8738539
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8738708 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcac 8738609  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 190  Q
    || | |||||||||| ||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738608 gg-caccttgaaatcatg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 8738539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 9090946 - 9090777
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  9090946 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcac 9090847  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 190  Q
    || | |||||||||| ||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090846 gg-caccttgaaatcatg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 9090777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 4601147 - 4601331
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    ||||||| | |||||||||||    
T  4601147 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 4601246  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 190  Q
      ||  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  4601247 atcc--gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacacaa 4601331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 8512642 - 8512820
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| |||||||    
T  8512642 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 8512741  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  8512742 ctgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2672604 - 2672427
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || ||| |||||| | ||||     
T  2672604 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2672505  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||  |  |   |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2672504 cggcatc--tccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 4598926 - 4599107
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    ||||||| | |||||||||||    
T  4598926 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 4599025  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
      ||  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599026 atcc--gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 25637193 - 25637013
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||| ||  |    
T  25637193 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctctcg--c 25637096  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  25637095 acctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 8517522 - 8517700
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| |||||||    
T  8517522 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 8517621  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  ||||||||||||   |||||||||| ||||||| ||||||||| | | ||||| ||||||||| ||||    
T  8517622 ctgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaagtcaat 8517700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 800864 - 800698
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    ||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||  |||||||||||  || |||||| ||||||||||  |     
T  800864 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatca 800765  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  800764 c-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 3617209 - 3617034
Alignment:
Q  11 ttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggccccctt 109  Q
    |||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  |||||||||    ||||||| | |||||||||||  ||      
T  3617209 ttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttgcacccctgcaaccctagctcacggcatcc-- 3617112  T
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617111 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 23198349 - 23198521
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||  ||| |||||||||||||||||   ||||||||||||||| | | | |||||  |||||||||||  ||||||||| ||||||||||      
T  23198349 agtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 23198448  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23198449 caca-aaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 23200548 - 23200720
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||  ||| |||||||||||||||||   ||||||||||||||| | | | |||||  |||||||||||  ||||||||| ||||||| ||      
T  23200548 agtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcat 23200647  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23200648 caca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 26928245 - 26928089
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    |||||||||||||||||   ||||||||||||||| | |||||| ||  |||||||||||  ||||||||| ||||||||||       |||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataaca-aaatcgtgtca 26928147  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26928146 cgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 32475886 - 32476064
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || | | |  ||| | |||||    
T  32475886 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctca 32475985  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32475986 ctgcctccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 32480744 - 32480922
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || | | |  ||| | |||||    
T  32480744 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctca 32480843  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32480844 ctgcctccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2676760 - 2676583
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || ||| |||||| | ||||     
T  2676760 tgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2676661  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    || |  |  |   |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2676660 cgacatc--tccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 10208959 - 10208775
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||||||||||| ||||| ||||| ||||||||||    ||||||| | || ||||||||    
T  10208959 agtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggc 10208860  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 190  Q
      ||  ||||||| |||||||| |||||||||||||| |||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  10208859 atcc--gaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatctcaacacaa 10208775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 24968519 - 24968697
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  24968519 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 24968618  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| ||  |  |||||||||||||  | |||||||| ||||||| || |||||||||| ||||| ||||||||| ||||    
T  24968619 ctgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaat 24968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10055986 - 10055817
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10055986 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10055887  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10055886 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10058208 - 10058039
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10058208 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10058109  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10058108 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10060430 - 10060261
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10060430 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10060331  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10060330 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10062652 - 10062483
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10062652 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10062553  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10062552 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10064874 - 10064705
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10064874 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10064775  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10064774 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 10067096 - 10066927
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  10067096 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10066997  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10066996 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 10211159 - 10210978
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| ||||| ||||| ||||| ||||||||||    ||||||| | || ||||||||    
T  10211159 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggc 10211060  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
      |||  |||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211059 atcct--aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 33386302 - 33386146
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    ||||||| |||||||||   ||||||||||||||| | ||| |||||  |||||||||||  ||||||||| ||||||||||  |    |||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcaca-aaatcgtgtca 33386204  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  33386203 cgatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 7782634 - 7782703
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7782634 gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 37408180 - 37408045
Alignment:
Q  42 aatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcac 141  Q
    |||||||||||||||| |  | ||||| |||||||||| |  ||||||||| |||||||||| |     ||||||||||||||||||| |||||||||||    
T  37408180 aatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacggcactaca-aaatcgtgtcacgatgccacaatcgtgtcac 37408083  T
Q  142 gatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  37408082 gatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 37726154 - 37726290
Alignment:
Q  42 aatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcac 141  Q
    ||||||||||||||| | ||| |||||  ||||||||| |  ||||||||| ||||||||||  |    |||||||||||||||  |||| |||||||||    
T  37726154 aatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcaca-aaatcgtgtcacgatatcaaattcgtgtcac 37726252  T
Q  142 gatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||| |||||||||||||||||||    
T  37726253 gatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 6718449 - 6718331
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  |||||  |||||||| ||  ||||||| |||||||||||| |    
T  6718449 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6718350  T
Q  106 ccttgaaatcgtgtcacgat 125  Q
    ||  ||||||||||||||||    
T  6718349 cc-cgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 27453416 - 27453572
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    ||||||| |||||||||   ||||||||||||||| | ||  ||| |  |||||||||||  ||| ||||| ||||||||||  |    |||||||||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcaca-aaatcgtgtca 27453514  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  27453515 cgatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaa 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 36029640 - 36029711
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||| |||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 36029711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 30709316 - 30709264
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 27974493 - 27974442
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 32143868 - 32143919
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 45282746 - 45282628
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  ||||||| |||||||||||| |    
T  45282746 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcac 45282647  T
Q  106 ccttgaaatcgtgtcacgat 125  Q
    ||  ||||||||||||||||    
T  45282646 cc-cgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 32143782 - 32143863
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggc 103  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||  |||||||||||  ||||||||||||||||||||    
T  32143782 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggc 32143863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 45282642 - 45282585
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 16264896 - 16264948
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatat 16264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 27038588 - 27038658
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||| ||   |||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  27038588 gaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 39032075 - 39032025
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 16498694 - 16498637
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 35926057 - 35926108
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  137 gtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 48438782 - 48438833
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 181  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 174  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 40592302 - 40592252
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 24694706 - 24694654
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 181  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  24694706 aaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 40735063 - 40735018
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 47923371 - 47923326
Alignment:
Q  136 tgtcacgatttctctgttcttccagaccacaaatttgaagccaata 181  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 7782552 - 7782603
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||    
T  7782552 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 7782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 40845220 - 40845266
Alignment:
Q  129 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||||||||||||||||||||||| ||| | || ||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 27986103 - 27986022
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggc 103  Q
    ||||||| |||||||||   ||||||||||||||| | ||  |||||  |||||||||||  ||||||||| ||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggc 27986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 43404486 - 43404515
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttcca 159  Q
    ||||||||||||||||||||||||||||||    
T  43404486 aaatcgtgtcacgatttctctgttcttcca 43404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 9634816 - 9634856
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 151  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 12406673 - 12406857
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  12406673 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacg 12406772  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406773 g-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 20357207 - 20357027
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  20357207 gtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg-cac 20357109  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357108 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 20357027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2058420 - 2058605
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2058420 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 2058519  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    ||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058520 ggcacc--tcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 2058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 4873537 - 4873722
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||    
T  4873537 gacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacg 4873636  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873637 g-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 4873722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 21640238 - 21640423
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  21640238 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcac 21640337  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640338 gg-cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 24024004 - 24023819
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  24024004 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctc 24023905  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     | || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24023904 tg-ccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagctaatatcaaca 24023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 31109255 - 31109070
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  31109255 gacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttac 31109156  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     |  | |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31109155 ag-gcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24789612 - 24789439
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  24789612 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcac 24789513  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    || | ||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24789512 gg-caccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 12397321 - 12397492
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |             | ||||||||||||||||||    
T  12397321 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcat-------------ggcctgcaaactagctcacg 12397407  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||| | |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12397408 gccac-ttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 18414094 - 18414266
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| ||||||| |||||||||  ||||||||| ||||||||||||||||||  |||||||||||| ||||||||| ||||||||| |     
T  18414094 agtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacgg-ca 18414192  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||   |||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18414193 ccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 20343680 - 20343500
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||  |||||  |||||||| || ||| |||| |||||||||||| |    
T  20343680 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcac 20343581  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  20343580 ccc-gaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 21811924 - 21811747
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||  ||||||||| | |||||    
T  21811924 tgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctca 21811825  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||  |  | | |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21811824 cggcatc--tcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 6592741 - 6592921
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  6592741 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 6592840  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592841 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21646457 - 21646634
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||| ||||||| |||||||||||||||||||||   |||||||||||||||| ||||||||||  |||||||||||  ||||||||| |||||||    
T  21646457 tgaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcac 21646556  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||  |   |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||    
T  21646557 ggcatcac-gaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 43504540 - 43504709
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   |||||||||||||||||||| ||||||  |||||||||||  ||||||||| ||||||||||      
T  43504540 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 43504639  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 176  Q
    |   |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  43504640 cac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 39731114 - 39730942
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||  |||||||||||  ||||||||| ||||||||||      
T  39731114 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 39731015  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39731014 caca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 6594957 - 6595137
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  6594957 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 6595056  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||    
T  6595057 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 32060708 - 32060888
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  32060708 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 32060807  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  32060808 tcc--gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 18409218 - 18409390
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| ||||||| |||||||||  |||||||||||||||||| |||||||||  || ||||||||  ||||||||| |||||||||| |    
T  18409218 agtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcac 18409317  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  18409318 caca-aaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 24265862 - 24265684
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| |||||||    
T  24265862 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 24265763  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  24265762 ctgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 48408563 - 48408407
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    |||||||||||||||||   ||||||||||||||||| |||||||||  |||||||||||  ||||||||| ||||||||||  |    |||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcaca-aaatcgtgtca 48408465  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  48408464 cgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16880475 - 16880653
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaacta-gctca 99  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| || ||| |||||||| |||||    
T  16880475 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16880574  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  |||||||||||||| |||||||||| ||||||| ||||| ||||||| ||||| ||||||||| ||||    
T  16880575 ctgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16885330 - 16885508
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaacta-gctca 99  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| || ||| |||||||| |||||    
T  16885330 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16885429  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  |||||||||||||| |||||||||| ||||||| ||||| ||||||| ||||| ||||||||| ||||    
T  16885430 ctgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 1533084 - 1532884
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||||| ||| |    
T  1533084 agtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcac 1532985  T
Q  106 c-------cttg-----------aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaac 186  Q
    |       | ||           || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1532984 ctcaaaatcatgtcacgatgccaaattcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaac 1532885  T
Q  187 a 187  Q
    |    
T  1532884 a 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 24261006 - 24260828
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || | | |   || | |||||    
T  24261006 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctca 24260907  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  24260906 ctgcctccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 24260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 18392600 - 18392780
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||  ||||| || ||  ||||||| | |||||||||||     
T  18392600 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggca 18392699  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  18392700 cc--tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 25767381 - 25767540
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||  |||||||||||  ||||||||| ||||||||| |  |  ||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgg-catcacgaaatcgtgtca 25767479  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 187  Q
    |||||||||| | ||||||||||||||      ||||||||||||||||||||||| ||||||||||    
T  25767480 cgatgccaaatttgtgtcacgatttct------ttccagaccacaaatttgaagccaaatatcaaca 25767540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 1562510 - 1562587
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562510 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 47264190 - 47264258
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47264190 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaa 47264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 2479815 - 2479951
Alignment:
Q  42 aatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaa-tcgtgtcacgatgccaaaatcgtgtca 140  Q
    |||||||| |||||||| ||| |||||  ||||||||| |  ||||||||| ||||||||||    | |||| |||||||||||||||||||||||||||    
T  2479815 aatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcat--tagaaaatcgtgtcacgatgccaaaatcgtgtca 2479912  T
Q  141 cgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    | |||||||||||||| || |||||||||||||||||||    
T  2479913 caatttctctgttcttacaaaccacaaatttgaagccaa 2479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 44847696 - 44847628
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaa 44847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 21983790 - 21983859
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21983790 aaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 21989387 - 21989522
Alignment:
Q  42 aatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgtcacgatgccaaaatcgtgtc 139  Q
    |||||||||||| |||| ||| ||||| |||||||| | || ||||||||| |||||||| |    |||  ||||||||||||||||   ||||| ||||    
T  21989387 aatcgtgtcacg-tttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgaca---ttgcaaaatcgtgtcacgatgatgaaatcttgtc 21989482  T
Q  140 acgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21989483 acgatttctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 79955 - 80007
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatat 80007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 1562407 - 1562479
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgattt 78  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| |||| |||||  ||||||||    
T  1562407 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 18389164 - 18389215
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||    
T  18389164 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 46515860 - 46515809
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaat 180  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  129 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 174  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  131 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 14070348 - 14070382
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  14070348 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 14380376 - 14380410
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  14380376 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 11857382 - 11857567
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11857382 tgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 11857481  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857482 gg-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14742111 - 14741926
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14742111 tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcac 14742012  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14742011 -gaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 22010373 - 22010189
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||    
T  22010373 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactaacttacg 22010274  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010273 g-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 30125185 - 30125018
Alignment:
Q  19 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| || | |||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacc-tcgaaatcgtg 30125087  T
Q  119 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 6438898 - 6439083
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  || ||| |||||| | |||||    
T  6438898 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctca 6438997  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  6438998 cggcacc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 14737251 - 14737084
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14737251 tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcac 14737152  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    || || ||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737151 gg-ccacttgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 14737084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 16578921 - 16579101
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| ||||||||| ||  ||||||| |||||||||||| |    
T  16578921 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16579020  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579021 ccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 16616459 - 16616279
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| ||||||||| ||  ||||||| |||||||||||| |    
T  16616459 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16616360  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616359 ccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5674415 - 5674229
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||  |||||||||||  ||||||||| |||||||    
T  5674415 tgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcac 5674316  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa-tatcaaca 187  Q
    || |  |   ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5674315 gg-catcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 5266487 - 5266654
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5266487 tgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 5266586  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    || | ||| |||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266587 gg-cacctcgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 5266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 27647642 - 27647480
Alignment:
Q  12 tatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttga 111  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||| ||  ||||| ||||||||| ||  ||||||| |||||||||||| |||  ||    
T  27647642 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcacccc-ga 27647544  T
Q  112 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  27647543 aatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 16554634 - 16554454
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| |||| |||| ||  |||| || |||||||||||| |    
T  16554634 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16554535  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554534 ccc-gaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 16631190 - 16631010
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| |||| |||| ||  |||| || |||||||||||| |    
T  16631190 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16631091  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631090 ccc-gaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 22709464 - 22709636
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| |||||| |||      
T  22709464 agtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcat 22709563  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22709564 caca-aaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 2171924 - 2172095
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| |||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||  |    
T  2171924 gtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 2172023  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
       |||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||||    
T  2172024 ac-gaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 6136367 - 6136547
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||     ||||||| | |||||||||||     
T  6136367 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggca 6136466  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  6136467 tcc--gaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16839145 - 16839323
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  16839145 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 16839244  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  16839245 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 33330118 - 33329940
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  33330118 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33330019  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33330018 cggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 25420977 - 25420796
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  25420977 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 25420878  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
     ||  |||||||||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  25420877 tcc--gaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacac 25420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 411872 - 411698
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctca 99  Q
    |||| ||||||||||| ||| ||||||||||||||||| |  ||||||||||||||||||||  |||||  |||||||||||  |||||| |||||||||    
T  411872 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctca 411773  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||| ||   ||||| ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  411772 cggcaccac-gaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 5343879 - 5344057
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || | | | | || | |||||    
T  5343879 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctca 5343978  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |  || || ||  |||||||||||||| | |||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  5343979 cttcctccctg--atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 33335615 - 33335437
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  33335615 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33335516  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||||| |  |||||| ||||||||||||| ||||||||||||||||||||    
T  33335515 cggcatc--tccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 33342507 - 33342688
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtaccacgatttggcgtcctgcaa-actagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    |||||||  ||||||||||||    
T  33342507 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 33342606  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
      ||  ||||||| ||| |||| |||||||||||||||||||||  |||||||||| ||||||||||||||| |||| ||||||    
T  33342607 atcc--gaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3073157 - 3073330
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||| |||||||||||||||||   |||||||||||||||||| |  |||||  |||||||||||  |||| | || |||||||    
T  3073157 tgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcac 3073256  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||  |   |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  3073257 ggcatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 6027013 - 6026834
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaa-actagctcacggccc 105  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| || | ||||| ||||||||||    |||||||  ||||||| ||  |     
T  6027013 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctctcg--ca 6026916  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||| ||||||||||||| |||||  ||||||||||||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026915 cctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 6005821 - 6005999
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  6005821 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 6005920  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
     |||  |  |   |||||||||||||  | |||||| | ||||||| ||||||| ||||| ||||||||||||||||||||    
T  6005921 tggcatc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 34166847 - 34166678
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  34166847 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 34166748  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  34166747 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 13151030 - 13150861
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||    ||||||| | || ||||||||    
T  13151030 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 13150931  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  13150930 atcc--gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 34164625 - 34164456
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtaccacgatttggcgtcctgcaa-actagctcacggc 103  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||| |||||  |||||||||    |||||||  ||| ||||||||    
T  34164625 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggc 34164526  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||  ||||||| |||||||| ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34164525 atcc--gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28155256 - 28155164
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaact 93  Q
    |||| |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||  ||||||||||    
T  28155256 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 28155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 23896792 - 23896944
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgt 119  Q
    ||||||| |||||||||   ||||||||||||||||| ||| |||||||||||||||| |  ||||||||| | ||||||      ||   |||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgata---ttacaaaatcgtgt 23896888  T
Q  120 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  23896889 cacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 26253666 - 26253602
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26253666 aaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 6097908 - 6097973
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||    
T  6097908 gaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 28155145 - 28155097
Alignment:
Q  132 atcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 16652877 - 16652759
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   || |||||||||||| || | ||||| |||||| || ||  ||| ||| |||||||||||| |    
T  16652877 agtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcac 16652778  T
Q  106 ccttgaaatcgtgtcacgat 125  Q
    ||  ||||||||||||||||    
T  16652777 cc-cgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 5757116 - 5756960
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccctt--gaaatcgtgt 119  Q
    ||||||| |||||||||   ||||||||||||||||| ||| |||||||||||||||| |  ||||||||| | ||||||    | ||   |||| ||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacg---acattacaaaattgtgt 5757020  T
Q  120 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| ||||||||||| |||||||| |||||  | |||| |||||| |||||||    
T  5757019 cacgatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaa 5756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 34151905 - 34151840
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||| |||||||| ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34151905 gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 24714938 - 24714989
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaat 180  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaat 24714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 25421071 - 25421020
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||    
T  25421071 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 25421020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 18234650 - 18234700
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  18234650 aaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 6097826 - 6097877
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||    
T  6097826 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 6097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 21272514 - 21272467
Alignment:
Q  135 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatat 21272467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 5571806 - 5571748
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    ||||||||||||||||||||| |||| ||| | ||||||||||||| |||  |||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaattcaacac 5571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 603772 - 603801
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttcca 159  Q
    ||||||||||||||||||||||||||||||    
T  603772 aaatcgtgtcacgatttctctgttcttcca 603801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 5413942 - 5413982
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 151  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  5413942 aaatcgtgtcacgattaccaaatcgtgtcacgatttctctg 5413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 9296047 - 9295862
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9296047 tgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcac 9295948  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9295947 gg-caccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 11098572 - 11098387
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11098572 tgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 11098473  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098472 gg-caccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 14291940 - 14292125
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14291940 tgaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 14292039  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || | ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14292040 gg-cacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 39811661 - 39811477
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||    
T  39811661 gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacg 39811562  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811561 gtcac-ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 25410087 - 25410257
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    ||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| | ||||||||  |     
T  25410087 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatca 25410186  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25410187 ca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 3492197 - 3492368
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||| |      
T  3492197 gtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgg-cat 3492295  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |   ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  3492296 cacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 12647787 - 12647967
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||||||||     
T  12647787 agtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 12647886  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647887 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 4484742 - 4484910
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    |||||||||||  || |||||||||||||||||   ||||||||||||||| |  ||||||||  |||||||||||  ||||||||||||||||||||      
T  4484742 agtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 4484841  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    | | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4484842 cat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 30833101 - 30832930
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| |||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||  |    
T  30833101 gtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 30833002  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
       ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  30833001 ac-gaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 32289329 - 32289157
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||  || ||||||||  ||||||||| ||||||||||      
T  32289329 agtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcat 32289230  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32289229 caca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 44310551 - 44310471
Alignment:
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310551 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 19344824 - 19345002
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| || ||| |||||| | |||||    
T  19344824 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctca 19344923  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   ||||| |||||||  | |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  19344924 cggcatc--tccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 32247276 - 32247352
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 6266453 - 6266287
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    ||||||||| ||| |||||||||| ||||||   ||||||||||||||||||||  |||||  |||||||||||  ||||||||| ||||||||||  |     
T  6266453 tccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 6266354  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
      ||||| ||||||||||| |||| |||||||||||||||  ||||||||||||||||||||||||||    
T  6266353 c-gaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 19349682 - 19349860
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  19349682 tgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 19349781  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  |   |||||||||||||  | |||| | | ||||||| ||||||||||||| |||||||||||||| |||||    
T  19349782 cggcatc--tccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaat 19349860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 40739292 - 40739448
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    |||||||||||||||||   ||| ||||||| ||| | |||||||||  |||||||||||  ||||||||| ||||||||||       |||||||||||    
T  40739292 acttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataaca-aaatcgtgtca 40739390  T
Q  122 cgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40739391 cgatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 8389681 - 8389629
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 8389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 10706783 - 10706731
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatat 10706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 36757477 - 36757425
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 21630511 - 21630562
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 181  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 28258729 - 28258678
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaa 28258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 39483443 - 39483494
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 181  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 33528155 - 33528105
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  136 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 23078002 - 23077950
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatat 23077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32247188 - 32247244
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  32247188 tgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 28258815 - 28258734
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggc 103  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || || |||||||||| |  ||||||||| ||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggc 28258734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 13569896 - 13569948
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 182  Q
    ||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  13569896 aaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaatat 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 3522 - 3337
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3522 tgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcac 3423  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3422 gg-ccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 34738 - 34554
Alignment:
Q  2 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacg 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | || |||    
T  34738 gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaacaaactaacg 34639  T
Q  102 gcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34638 g-ccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 41391001 - 41391185
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  41391001 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41391100  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||  |  | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41391101 ggcatc--tcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaatcaaca 41391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 39445897 - 39446082
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| | |||||    
T  39445897 tgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 39445996  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||  |  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39445997 cggcatc--tcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 1054699 - 1054514
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||    
T  1054699 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 1054600  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1054599 cggcacc--tccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 44023562 - 44023377
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| | ||||    
T  44023562 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 44023463  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44023462 cggcacc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 20622635 - 20622808
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||  |||||  |||||||||||  |||||| ||||||||||    
T  20622635 tgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcac 20622734  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    || | ||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20622735 gg-caccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 25439584 - 25439406
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||| | |||||    
T  25439584 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctca 25439485  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  | |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25439484 cggcatc--tcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24793832 - 24793663
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24793832 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 24793733  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 190  Q
    || | ||| |||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793732 gg-cacctcgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 24793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 25444777 - 25444599
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||||||| ||||||||| || |||| ||||| | |||||    
T  25444777 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctca 25444678  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||  |  | |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25444677 cggcatc--tcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 44203398 - 44203218
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| || | ||||| ||||||||||    ||||||| | |||||||||||     
T  44203398 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 44203299  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203298 cc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24787010 - 24786908
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24787010 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 24786911  T
Q  101 ggc 103  Q
    |||    
T  24786910 ggc 24786908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 51765176 - 51764999
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||||| ||| |||||||||||||||||   ||||||||||||||| | |||||||||  |||||||||||  ||||||||| |||||||    
T  51765176 tgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcac 51765077  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||  |   ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  51765076 ggcatcac-gaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 9036183 - 9036003
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||  ||| || ||  ||||| || ||  ||||||| |||||||||||| |    
T  9036183 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcac 9036084  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036083 ccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 19361092 - 19360921
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| |||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||  |    
T  19361092 gtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 19360993  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
        ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19360992 aca-aaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 19365948 - 19365781
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    |||||||||  ||| | |||||||||||||||   |||||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||  |    
T  19365948 gtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 19365849  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
        ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  19365848 aca-aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 21053726 - 21053540
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctca 99  Q
    |||| ||||||||||| ||| ||||||||||||||||| |  ||||||||||||||||||||  |||||  |||||||||||  | ||||  ||||||||    
T  21053726 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctca 21053627  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | || ||   |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  21053626 ctgcaccac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 40282145 - 40281971
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctca 99  Q
    |||| ||||||||||| ||| ||||||||||||||||| |  |||||||||||||||| |||  |||||  |||||||||||  ||||||| ||||||||    
T  40282145 tgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctca 40282046  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||| ||  | ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  40282045 cggcaccact-aaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 9986971 - 9986798
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| ||||||||| | ||| |||||||||||||||||   ||||||||||||||||||||| |||||  |||||||||||   ||||| || |||||||    
T  9986971 tgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcac 9986872  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||| ||   |||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  9986871 ggcaccac-gaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41398656 - 41398758
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    |||| |||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  41398656 tgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41398755  T
Q  101 ggc 103  Q
    |||    
T  41398756 ggc 41398758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 43988134 - 43987956
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||| || ||| |||||| | |||||    
T  43988134 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgcttccagcaaacttggctca 43988035  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| |  ||  |||||||||||||  | |||||| | ||||||| ||||| ||| ||| ||||||||||||||||||||    
T  43988034 ctgcctctctg--atcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaat 43987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 24202367 - 24202260
Alignment:
Q  71 cacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 170  Q
    |||||||||||  ||||||||| ||||||||||  |   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24202367 cacgatttggcaccctgcaaaccagctcacggcatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatt 24202269  T
Q  171 tgaagccaa 179  Q
    |||||||||    
T  24202268 tgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 41398764 - 41398821
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaatcaaca 41398821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 13604172 - 13604108
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13604172 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 21536189 - 21536121
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||| ||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 16647900 - 16647854
Alignment:
Q  187 acaatggtacagggtgtggagtttttaggggagaaagtgggtagcta 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16647900 acaatggtacagggtgtggagtttttaggggagaaagtgggtagcta 16647854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 26644450 - 26644381
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||| |||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||    
T  26644450 aaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 37070334 - 37070384
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaat 37070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 13659840 - 13659897
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 3282273 - 3282322
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaa 3282322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24202416 - 24202360
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattt 57  Q
    |||| ||||||||||| |||||||||||||||||||||   ||||||||||||||||    
T  24202416 tgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 16124238 - 16124188
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||| |||||||||||||||||||||| ||||||||||| || |||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 29652381 - 29652418
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaa 167  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  29652381 aaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 1192328 - 1192296
Alignment:
Q  110 gaaatcgtgtcacgatgccaaaatcgtgtcacg 142  Q
    ||||||||||||||||||||||||||| |||||    
T  1192328 gaaatcgtgtcacgatgccaaaatcgtatcacg 1192296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 22119 - 21948
Alignment:
Q  7 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccc 106  Q
    ||||||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacgg-cac 22021  T
Q  107 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    || |||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||||    
T  22020 ctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 760 - 945
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactag-ctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| | ||||    
T  760 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 859  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    |||| ||  |  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  860 cggcacc--tccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 17610 - 17440
Alignment:
Q  8 tccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccccc 107  Q
    ||||||||| |||||||||||||||||||||   |||| ||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||  |     
T  17610 tccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 17511  T
Q  108 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
      |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17510 c-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 8107 - 8274
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcac 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  8107 tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcac 8206  T
Q  101 ggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
    || || ||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8207 gg-ccacttgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 11573 - 11744
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||| |||||  |||||||||||  ||||||||| ||||||||||      
T  11573 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcat 11671  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11672 cat-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 9128 - 9299
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggccc 105  Q
    ||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||| ||| |  |||||||||||  ||||||||| ||||||||||      
T  9128 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcat 9226  T
Q  106 ccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9227 cac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 3005 - 3186
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||||||||     
T  3005 agtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 3104  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 188  Q
     ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  3105 tcc--gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacac 3186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 4130 - 4310
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggcc 104  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||    ||||||| | |||||||||||     
T  4130 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 4229  T
Q  105 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||  | ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4230 cc--taaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 176635 - 176450
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| |||||||    
T  176635 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 176536  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    | ||| || ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||| |||||    
T  176535 ctgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaataccaaca 176450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 13969 - 13791
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| |||||||    
T  13969 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 13870  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| || ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  13869 ctgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 18849 - 18671
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| || ||| |||||| |||||||    
T  18849 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 18750  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| |  |   |||||||||||||  | |||||| | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  18749 ctgcctc--tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 1924 - 1746
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  1924 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 1825  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| ||  |  |||||||||||||  | |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  1824 ctgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 148629 - 148451
Alignment:
Q  1 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaac-tagctca 99  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||| | |||||    
T  148629 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 148530  T
Q  100 cggcccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    | ||| ||  |  |||||||||||||  | |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  148529 ctgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 1784 - 1707
Alignment:
Q  112 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 189  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacaca 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 6040 - 5859
Alignment:
Q  6 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttc-ccaagatcgtaccacgatttggcgtcctgcaaac-tagctcacggc 103  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||  |||  |||||  ||||| || ||  ||||||| | |||||||||||    
T  6040 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctcacggc 5941  T
Q  104 ccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
     ||  |  |||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5940 acc--tccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 647 - 519
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtca 121  Q
    ||||||||||||| |||   ||||||||||||||| | |||||||||  |||||||||||  ||||||||||||||||||| |  |  ||||||||||||    
T  647 acttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacgg-catcacgaaatcgtgtca 549  T
Q  122 cgatgccaaaatcgtgtcacgatttctctg 151  Q
    |||||||||| |||||||||||||||||||    
T  548 cgatgccaaattcgtgtcacgatttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 7988 - 7920
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7988 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 1248 - 1096
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgt 119  Q
    ||||||| |||||||||   ||||||||||||||||| ||| |||||||||||||||| |  ||||||||| | ||||||      ||   |||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgata---ttacaaaatcgtgt 1152  T
Q  120 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  1151 cacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 43599 - 43443
Alignment:
Q  22 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtaccacgatttggcgtcctgcaaactagctcacggcccccttg--aaatcgtgt 119  Q
    ||||||| |||||||||   |||| |||||||||||| ||| |||||||||||||||| |  |||| |||| |||||||| |    ||   |||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgaca---ttacaaaatcgtgt 43503  T
Q  120 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  43502 cacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaa 43443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 36384 - 36332
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaat 36332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 132829 - 132765
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 175  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  132829 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 3060 - 3110
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 180  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 149601 - 149658
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 187  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 45744 - 45795
Alignment:
Q  128 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 179  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 86153 - 86206
Alignment:
Q  130 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaatat 182  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatat 86206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 6784 - 6750
Alignment:
Q  111 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  6784 aaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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