View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16965_low_34 (Length: 206)

Name: NF16965_low_34
Description: NF16965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16965_low_34
NF16965_low_34
[»] chr7 (109 HSPs)
chr7 (1-199)||(33691491-33691689)
chr7 (1-199)||(30026086-30026284)
chr7 (1-199)||(2500219-2500418)
chr7 (1-199)||(2913386-2913585)
chr7 (44-191)||(14426752-14426899)
chr7 (4-191)||(16542810-16542996)
chr7 (4-191)||(16622666-16622852)
chr7 (43-199)||(13880341-13880497)
chr7 (1-199)||(44467246-44467443)
chr7 (4-191)||(28622139-28622332)
chr7 (4-191)||(9709606-9709778)
chr7 (41-191)||(30945163-30945312)
chr7 (4-191)||(48236707-48236878)
chr7 (1-172)||(10882965-10883150)
chr7 (42-199)||(13648934-13649092)
chr7 (1-199)||(15088701-15088882)
chr7 (43-172)||(11319642-11319771)
chr7 (43-199)||(14193311-14193472)
chr7 (43-172)||(13692577-13692707)
chr7 (4-191)||(33605868-33606072)
chr7 (43-199)||(28409275-28409427)
chr7 (41-191)||(30944130-30944279)
chr7 (1-199)||(29935143-29935336)
chr7 (57-199)||(4494725-4494866)
chr7 (43-192)||(22577792-22577944)
chr7 (43-199)||(12366515-12366671)
chr7 (1-199)||(13137689-13137872)
chr7 (81-199)||(48800406-48800524)
chr7 (8-130)||(21381287-21381409)
chr7 (93-198)||(12174090-12174195)
chr7 (4-198)||(27871892-27872089)
chr7 (43-174)||(13880828-13880958)
chr7 (116-199)||(15469777-15469860)
chr7 (4-198)||(14425619-14425815)
chr7 (8-108)||(19339131-19339231)
chr7 (41-108)||(1293183-1293250)
chr7 (1-204)||(21695582-21695768)
chr7 (93-192)||(35952443-35952542)
chr7 (125-199)||(23279805-23279879)
chr7 (43-191)||(7339656-7339821)
chr7 (4-191)||(16111655-16111860)
chr7 (94-199)||(16316341-16316446)
chr7 (6-106)||(331830-331932)
chr7 (4-199)||(9069746-9069966)
chr7 (16-199)||(13018289-13018469)
chr7 (55-152)||(5000667-5000764)
chr7 (94-199)||(11793195-11793300)
chr7 (94-199)||(13303109-13303214)
chr7 (28-108)||(5826170-5826250)
chr7 (77-193)||(2265302-2265420)
chr7 (94-172)||(13730502-13730579)
chr7 (6-108)||(32264598-32264700)
chr7 (43-199)||(13260389-13260546)
chr7 (51-199)||(13031852-13031998)
chr7 (1-122)||(15468097-15468232)
chr7 (7-91)||(39284452-39284536)
chr7 (43-169)||(9098040-9098165)
chr7 (43-108)||(8183165-8183230)
chr7 (27-87)||(16556609-16556669)
chr7 (27-87)||(16608993-16609053)
chr7 (43-192)||(4821709-4821862)
chr7 (43-191)||(48062600-48062751)
chr7 (43-108)||(48805729-48805795)
chr7 (110-199)||(331955-332043)
chr7 (1-62)||(23279875-23279936)
chr7 (8-66)||(4821659-4821717)
chr7 (94-163)||(24788381-24788450)
chr7 (4-63)||(8183111-8183170)
chr7 (4-66)||(12174254-12174316)
chr7 (4-53)||(2265446-2265495)
chr7 (1-53)||(11793088-11793140)
chr7 (45-172)||(19236804-19236931)
chr7 (94-193)||(41842077-41842177)
chr7 (39-90)||(24788343-24788394)
chr7 (1-51)||(14193255-14193305)
chr7 (4-66)||(35952601-35952663)
chr7 (4-66)||(48062743-48062805)
chr7 (58-103)||(2265411-2265456)
chr7 (94-137)||(16609043-16609086)
chr7 (4-67)||(19710924-19710987)
chr7 (8-66)||(4429001-4429059)
chr7 (94-198)||(8183234-8183340)
chr7 (43-89)||(12174216-12174262)
chr7 (1-43)||(13302991-13303033)
chr7 (43-93)||(35952559-35952609)
chr7 (120-191)||(5826280-5826353)
chr7 (26-116)||(11005594-11005686)
chr7 (26-116)||(24735162-24735254)
chr7 (26-116)||(24745109-24745201)
chr7 (26-116)||(26389878-26389970)
chr7 (26-116)||(26400520-26400612)
chr7 (43-116)||(4212420-4212495)
chr7 (43-116)||(4223019-4223094)
chr7 (43-98)||(4428938-4428994)
chr7 (56-116)||(5685926-5685986)
chr7 (43-116)||(6867041-6867116)
chr7 (43-116)||(6877673-6877748)
chr7 (134-166)||(8998676-8998708)
chr7 (43-116)||(9433673-9433748)
chr7 (134-166)||(11086802-11086834)
chr7 (1-37)||(13260564-13260600)
chr7 (43-116)||(14745485-14745560)
chr7 (130-166)||(19710797-19710833)
chr7 (43-116)||(20990062-20990137)
chr7 (43-116)||(21002824-21002899)
chr7 (1-37)||(22577962-22577998)
chr7 (43-116)||(23264407-23264482)
chr7 (43-116)||(24930419-24930494)
chr7 (43-116)||(37344609-37344684)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-191)||(89793-89980)
[»] chr3 (131 HSPs)
chr3 (1-199)||(2561372-2561576)
chr3 (1-199)||(28582290-28582503)
chr3 (8-191)||(11223752-11223935)
chr3 (43-199)||(52920645-52920801)
chr3 (1-199)||(14969511-14969710)
chr3 (43-199)||(18121384-18121540)
chr3 (43-199)||(31303626-31303785)
chr3 (1-172)||(12962891-12963060)
chr3 (4-191)||(47207892-47208098)
chr3 (45-199)||(15903441-15903595)
chr3 (43-172)||(41495214-41495343)
chr3 (43-199)||(6090972-6091128)
chr3 (48-191)||(53056498-53056642)
chr3 (43-172)||(20646395-20646524)
chr3 (43-199)||(14392769-14392925)
chr3 (43-199)||(13824272-13824429)
chr3 (43-172)||(13948576-13948705)
chr3 (58-192)||(47405221-47405356)
chr3 (39-193)||(17238723-17238876)
chr3 (77-191)||(50300492-50300606)
chr3 (43-199)||(37467542-37467698)
chr3 (77-191)||(11869360-11869474)
chr3 (43-192)||(22803871-22804019)
chr3 (94-191)||(40800117-40800214)
chr3 (4-108)||(30054096-30054200)
chr3 (4-107)||(46796248-46796351)
chr3 (77-198)||(33583536-33583657)
chr3 (77-198)||(33598156-33598277)
chr3 (7-108)||(40851147-40851248)
chr3 (4-103)||(11869253-11869352)
chr3 (77-191)||(29855700-29855815)
chr3 (79-199)||(49553251-49553372)
chr3 (94-191)||(20627250-20627347)
chr3 (93-198)||(38177453-38177558)
chr3 (43-172)||(16199602-16199730)
chr3 (42-126)||(18142619-18142703)
chr3 (77-191)||(14955732-14955847)
chr3 (94-172)||(49642569-49642647)
chr3 (4-108)||(15833573-15833678)
chr3 (83-192)||(24775268-24775380)
chr3 (43-172)||(29951229-29951357)
chr3 (43-172)||(30000383-30000511)
chr3 (43-191)||(46349598-46349764)
chr3 (43-108)||(49666270-49666335)
chr3 (77-198)||(5216261-5216384)
chr3 (58-169)||(16658434-16658551)
chr3 (43-130)||(1727858-1727945)
chr3 (4-106)||(10529513-10529616)
chr3 (77-191)||(22141017-22141132)
chr3 (94-192)||(12726033-12726131)
chr3 (43-199)||(25398026-25398194)
chr3 (27-108)||(9699934-9700015)
chr3 (77-191)||(2785370-2785486)
chr3 (43-103)||(50300441-50300501)
chr3 (94-199)||(16032771-16032876)
chr3 (43-104)||(21636538-21636599)
chr3 (41-108)||(13977939-13978007)
chr3 (43-103)||(14955681-14955741)
chr3 (43-103)||(29855649-29855709)
chr3 (43-103)||(33583485-33583545)
chr3 (43-103)||(33598105-33598165)
chr3 (57-172)||(19249203-19249318)
chr3 (4-66)||(2785250-2785312)
chr3 (43-108)||(21605518-21605583)
chr3 (1-53)||(16658541-16658593)
chr3 (1-53)||(20646339-20646391)
chr3 (1-53)||(52920589-52920641)
chr3 (7-66)||(14955615-14955674)
chr3 (94-198)||(2028576-2028682)
chr3 (94-198)||(21605406-21605514)
chr3 (94-198)||(21606325-21606431)
chr3 (26-116)||(9380375-9380467)
chr3 (48-108)||(15851163-15851224)
chr3 (4-53)||(20627356-20627405)
chr3 (4-61)||(21641051-21641108)
chr3 (51-108)||(21641113-21641170)
chr3 (4-53)||(47405346-47405395)
chr3 (43-103)||(2785319-2785379)
chr3 (1-53)||(6090916-6090968)
chr3 (43-91)||(12388729-12388777)
chr3 (1-53)||(13948520-13948572)
chr3 (1-80)||(19888842-19888919)
chr3 (56-108)||(37412859-37412911)
chr3 (5-53)||(40800060-40800108)
chr3 (1-53)||(49642685-49642737)
chr3 (109-175)||(11908752-11908819)
chr3 (2-37)||(18121561-18121596)
chr3 (109-198)||(21636422-21636515)
chr3 (109-198)||(49666160-49666251)
chr3 (4-66)||(49666327-49666389)
chr3 (1-53)||(38177566-38177618)
chr3 (25-64)||(512501-512540)
chr3 (94-153)||(12388685-12388743)
chr3 (109-175)||(12752388-12752455)
chr3 (123-170)||(14073004-14073051)
chr3 (4-67)||(51341189-51341252)
chr3 (2-32)||(18142696-18142726)
chr3 (4-66)||(33583416-33583478)
chr3 (4-66)||(33598036-33598098)
chr3 (26-116)||(5579352-5579444)
chr3 (26-116)||(5627736-5627828)
chr3 (26-116)||(5865431-5865523)
chr3 (26-116)||(5876013-5876105)
chr3 (123-172)||(8728816-8728865)
chr3 (139-172)||(8739787-8739820)
chr3 (123-172)||(9080703-9080752)
chr3 (139-172)||(9092025-9092058)
chr3 (26-116)||(18484470-18484562)
chr3 (26-116)||(24660325-24660417)
chr3 (26-116)||(24670905-24670997)
chr3 (4-66)||(24775444-24775508)
chr3 (26-116)||(28313950-28314042)
chr3 (26-116)||(28324566-28324658)
chr3 (26-116)||(35187802-35187894)
chr3 (58-91)||(40800098-40800131)
chr3 (43-116)||(4174491-4174566)
chr3 (43-116)||(4744162-4744237)
chr3 (43-116)||(4754747-4754822)
chr3 (26-107)||(11167897-11167980)
chr3 (134-166)||(13148610-13148642)
chr3 (43-116)||(13557999-13558074)
chr3 (43-116)||(16476703-16476778)
chr3 (43-116)||(16493462-16493537)
chr3 (43-116)||(20672931-20673006)
chr3 (43-116)||(20683516-20683591)
chr3 (10-66)||(21636591-21636647)
chr3 (43-116)||(23757723-23757798)
chr3 (43-116)||(37866870-37866945)
chr3 (56-116)||(37886001-37886061)
chr3 (4-48)||(46349774-46349818)
chr3 (134-166)||(51988803-51988835)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-199)||(7888-8086)
[»] chr8 (106 HSPs)
chr8 (1-199)||(17441585-17441782)
chr8 (4-191)||(23185012-23185199)
chr8 (1-199)||(18120886-18121083)
chr8 (2-172)||(19156374-19156544)
chr8 (1-199)||(21933060-21933290)
chr8 (43-199)||(20382158-20382314)
chr8 (4-191)||(45538224-45538412)
chr8 (1-199)||(602497-602694)
chr8 (44-172)||(20255357-20255485)
chr8 (43-172)||(17267704-17267833)
chr8 (43-164)||(29693548-29693671)
chr8 (43-172)||(16681095-16681223)
chr8 (76-193)||(16189265-16189382)
chr8 (1-152)||(18679992-18680140)
chr8 (43-199)||(39693768-39693924)
chr8 (81-191)||(30421212-30421322)
chr8 (43-191)||(17797654-17797804)
chr8 (43-172)||(17914692-17914821)
chr8 (43-192)||(24646571-24646719)
chr8 (94-198)||(22745754-22745858)
chr8 (43-199)||(19943470-19943626)
chr8 (4-191)||(24832824-24833029)
chr8 (4-107)||(6407894-6407997)
chr8 (4-107)||(14989330-14989433)
chr8 (77-198)||(1237935-1238057)
chr8 (7-108)||(13430505-13430606)
chr8 (4-107)||(18151535-18151638)
chr8 (77-191)||(15335811-15335926)
chr8 (77-191)||(15424876-15424991)
chr8 (77-191)||(15516180-15516295)
chr8 (77-186)||(9320853-9320963)
chr8 (1-98)||(12757640-12757737)
chr8 (7-106)||(1745332-1745431)
chr8 (43-199)||(2811053-2811209)
chr8 (43-172)||(33083088-33083219)
chr8 (77-198)||(40845133-40845256)
chr8 (43-168)||(17525523-17525648)
chr8 (43-172)||(19707736-19707864)
chr8 (11-108)||(21288579-21288676)
chr8 (25-108)||(43639990-43640071)
chr8 (77-198)||(36105493-36105616)
chr8 (43-134)||(23263438-23263531)
chr8 (4-66)||(36105373-36105435)
chr8 (11-108)||(21301198-21301295)
chr8 (110-186)||(16207555-16207631)
chr8 (4-66)||(15335999-15336061)
chr8 (4-66)||(15425064-15425126)
chr8 (4-66)||(15516368-15516430)
chr8 (77-199)||(17701994-17702115)
chr8 (4-66)||(17797600-17797662)
chr8 (100-193)||(19927335-19927429)
chr8 (94-199)||(18320953-18321058)
chr8 (43-103)||(1237884-1237944)
chr8 (42-152)||(18719202-18719308)
chr8 (1-53)||(22745664-22745716)
chr8 (43-103)||(36105442-36105502)
chr8 (4-66)||(3598257-3598319)
chr8 (1-90)||(18321045-18321133)
chr8 (93-191)||(3598098-3598198)
chr8 (43-103)||(9320802-9320862)
chr8 (43-103)||(22674010-22674070)
chr8 (43-103)||(24551521-24551581)
chr8 (109-172)||(22461419-22461482)
chr8 (4-66)||(22673956-22674018)
chr8 (43-108)||(43774100-43774166)
chr8 (43-171)||(18730766-18730894)
chr8 (2-51)||(24646516-24646565)
chr8 (5-66)||(40845299-40845360)
chr8 (43-103)||(3598205-3598265)
chr8 (1-53)||(16207483-16207535)
chr8 (44-171)||(18685201-18685328)
chr8 (109-198)||(6408016-6408107)
chr8 (56-170)||(19956142-19956256)
chr8 (4-66)||(9320748-9320810)
chr8 (46-103)||(22663366-22663423)
chr8 (77-198)||(22674061-22674187)
chr8 (1-53)||(39693712-39693764)
chr8 (109-175)||(21541287-21541354)
chr8 (77-191)||(24551572-24551680)
chr8 (11-66)||(43774053-43774108)
chr8 (43-172)||(18722420-18722549)
chr8 (4-54)||(21541125-21541175)
chr8 (4-66)||(22663294-22663356)
chr8 (4-53)||(30421352-30421401)
chr8 (26-91)||(23457081-23457148)
chr8 (42-116)||(6318304-6318381)
chr8 (109-198)||(14989220-14989310)
chr8 (4-63)||(24551452-24551511)
chr8 (58-96)||(30421324-30421362)
chr8 (26-116)||(3348379-3348471)
chr8 (26-116)||(3358976-3359068)
chr8 (43-116)||(6161461-6161536)
chr8 (56-116)||(15780479-15780539)
chr8 (43-116)||(15791068-15791143)
chr8 (134-166)||(17518840-17518872)
chr8 (1-37)||(17525666-17525702)
chr8 (43-116)||(19129166-19129241)
chr8 (43-116)||(19139716-19139791)
chr8 (43-116)||(26111668-26111743)
chr8 (43-116)||(26121346-26121421)
chr8 (26-108)||(28903676-28903760)
chr8 (134-166)||(28903806-28903838)
chr8 (1-37)||(33083034-33083070)
chr8 (58-106)||(33560119-33560167)
chr8 (134-166)||(40003532-40003564)
chr8 (43-116)||(43248753-43248828)
[»] chr6 (84 HSPs)
chr6 (4-191)||(21235299-21235486)
chr6 (4-191)||(22802327-22802514)
chr6 (7-191)||(20730480-20730664)
chr6 (4-191)||(16264926-16265113)
chr6 (1-199)||(32544450-32544665)
chr6 (1-193)||(34451442-34451632)
chr6 (4-192)||(15954889-15955078)
chr6 (1-198)||(29918201-29918399)
chr6 (43-199)||(13435773-13435929)
chr6 (3-199)||(19624166-19624359)
chr6 (43-172)||(24117069-24117198)
chr6 (1-172)||(9718028-9718213)
chr6 (1-167)||(12715219-12715383)
chr6 (77-193)||(26971968-26972084)
chr6 (1-199)||(19086333-19086547)
chr6 (43-192)||(15531382-15531532)
chr6 (1-199)||(20112466-20112663)
chr6 (4-192)||(33351702-33351892)
chr6 (78-199)||(18435850-18435971)
chr6 (43-199)||(21625339-21625495)
chr6 (42-172)||(15302409-15302541)
chr6 (7-108)||(19065886-19065987)
chr6 (94-199)||(19689008-19689113)
chr6 (39-199)||(14100225-14100383)
chr6 (4-108)||(17608182-17608286)
chr6 (43-169)||(23284805-23284930)
chr6 (77-192)||(17381705-17381821)
chr6 (77-191)||(20487661-20487775)
chr6 (4-191)||(16877399-16877604)
chr6 (4-198)||(21618430-21618633)
chr6 (77-191)||(19832760-19832875)
chr6 (94-172)||(13602447-13602525)
chr6 (77-182)||(139136-139241)
chr6 (77-182)||(147157-147262)
chr6 (94-166)||(18378545-18378617)
chr6 (1-68)||(26972125-26972192)
chr6 (1-63)||(18435741-18435803)
chr6 (94-193)||(22058338-22058439)
chr6 (43-103)||(17381654-17381714)
chr6 (43-166)||(10640222-10640344)
chr6 (77-198)||(12423497-12423620)
chr6 (94-172)||(25597754-25597832)
chr6 (94-193)||(12349254-12349355)
chr6 (77-198)||(16336429-16336551)
chr6 (25-103)||(12423428-12423506)
chr6 (4-66)||(22076308-22076370)
chr6 (96-193)||(15987488-15987585)
chr6 (43-108)||(19482994-19483059)
chr6 (43-104)||(26589848-26589909)
chr6 (43-108)||(20635947-20636013)
chr6 (49-101)||(16336384-16336436)
chr6 (120-172)||(18383956-18384008)
chr6 (43-107)||(19470908-19470971)
chr6 (43-90)||(13602413-13602460)
chr6 (63-161)||(3680738-3680835)
chr6 (58-108)||(12349200-12349250)
chr6 (43-108)||(22387026-22387092)
chr6 (4-61)||(19832938-19832995)
chr6 (43-91)||(26943803-26943851)
chr6 (43-90)||(25597720-25597767)
chr6 (4-66)||(21128396-21128458)
chr6 (4-66)||(22386972-22387034)
chr6 (4-57)||(16336313-16336366)
chr6 (27-108)||(17316415-17316493)
chr6 (1-53)||(13602357-13602409)
chr6 (1-53)||(25597664-25597716)
chr6 (109-175)||(17608095-17608162)
chr6 (123-170)||(25592839-25592886)
chr6 (28-66)||(139269-139307)
chr6 (28-66)||(147290-147328)
chr6 (24-66)||(19482930-19482972)
chr6 (4-66)||(20487818-20487880)
chr6 (26-116)||(31982355-31982447)
chr6 (43-116)||(9112241-9112316)
chr6 (43-116)||(9122878-9122953)
chr6 (43-116)||(12855396-12855471)
chr6 (43-116)||(12865922-12865997)
chr6 (43-107)||(14069903-14069962)
chr6 (43-116)||(18726629-18726704)
chr6 (134-166)||(21128564-21128596)
chr6 (43-116)||(26875787-26875862)
chr6 (43-116)||(32961675-32961750)
chr6 (43-116)||(32972294-32972369)
chr6 (43-116)||(33199702-33199777)
[»] chr5 (86 HSPs)
chr5 (4-191)||(5430066-5430253)
chr5 (4-191)||(33022846-33023033)
chr5 (2-164)||(26784536-26784699)
chr5 (4-191)||(31118060-31118245)
chr5 (4-191)||(14086305-14086492)
chr5 (1-148)||(41566243-41566390)
chr5 (4-191)||(4887204-4887392)
chr5 (43-172)||(17815203-17815333)
chr5 (1-199)||(21072001-21072197)
chr5 (4-194)||(30115638-30115831)
chr5 (44-199)||(89197-89352)
chr5 (42-172)||(21910761-21910892)
chr5 (43-191)||(29138159-29138309)
chr5 (76-204)||(7745402-7745530)
chr5 (44-198)||(28139809-28139965)
chr5 (8-108)||(28464200-28464300)
chr5 (94-199)||(20551149-20551255)
chr5 (4-198)||(3245183-3245397)
chr5 (1-199)||(23412751-23412930)
chr5 (81-191)||(33933577-33933688)
chr5 (43-152)||(19536093-19536202)
chr5 (7-144)||(9398559-9398695)
chr5 (4-108)||(10848946-10849050)
chr5 (4-103)||(15517151-15517250)
chr5 (77-191)||(42243968-42244083)
chr5 (43-153)||(642499-642608)
chr5 (77-190)||(11994185-11994299)
chr5 (43-172)||(21099476-21099605)
chr5 (43-193)||(23881303-23881452)
chr5 (77-181)||(26759451-26759556)
chr5 (78-198)||(30743283-30743404)
chr5 (94-198)||(9089199-9089305)
chr5 (43-108)||(23391465-23391530)
chr5 (1-84)||(6512306-6512387)
chr5 (4-66)||(11994070-11994132)
chr5 (14-108)||(35931865-35931959)
chr5 (94-169)||(12352608-12352684)
chr5 (42-108)||(21660438-21660505)
chr5 (106-172)||(6512235-6512301)
chr5 (4-66)||(26759331-26759393)
chr5 (4-64)||(23478536-23478596)
chr5 (43-91)||(25096661-25096709)
chr5 (43-91)||(25154631-25154679)
chr5 (43-103)||(26759400-26759460)
chr5 (43-103)||(42243917-42243977)
chr5 (1-90)||(20551076-20551162)
chr5 (43-102)||(35986083-35986142)
chr5 (109-193)||(15517273-15517359)
chr5 (43-108)||(23478590-23478656)
chr5 (8-66)||(35986134-35986192)
chr5 (16-192)||(6499433-6499607)
chr5 (44-96)||(33933523-33933575)
chr5 (109-175)||(23478676-23478743)
chr5 (4-51)||(29138316-29138363)
chr5 (4-66)||(32160949-32161011)
chr5 (4-53)||(9089141-9089190)
chr5 (8-53)||(21099609-21099654)
chr5 (58-107)||(25930032-25930081)
chr5 (77-198)||(25929922-25930045)
chr5 (43-116)||(39362169-39362244)
chr5 (4-67)||(25111776-25111839)
chr5 (4-67)||(25170867-25170930)
chr5 (43-93)||(30743231-30743281)
chr5 (4-66)||(33933453-33933515)
chr5 (4-38)||(42243863-42243897)
chr5 (109-192)||(10849069-10849154)
chr5 (7-87)||(21198877-21198955)
chr5 (26-116)||(22675954-22676046)
chr5 (26-116)||(22685845-22685937)
chr5 (26-108)||(24983750-24983834)
chr5 (26-116)||(27042542-27042634)
chr5 (26-116)||(27053167-27053259)
chr5 (26-116)||(35225927-35226019)
chr5 (26-116)||(39502451-39502543)
chr5 (134-166)||(1915740-1915772)
chr5 (56-116)||(5301480-5301540)
chr5 (43-116)||(7032458-7032533)
chr5 (1-29)||(13545448-13545476)
chr5 (26-91)||(17447025-17447092)
chr5 (1-37)||(21910737-21910773)
chr5 (43-108)||(24926469-24926536)
chr5 (56-116)||(27203665-27203725)
chr5 (43-116)||(34771767-34771842)
chr5 (43-116)||(34782712-34782787)
chr5 (134-166)||(40032534-40032566)
chr5 (134-166)||(40228999-40229031)
[»] chr4 (87 HSPs)
chr4 (1-193)||(10073113-10073307)
chr4 (1-198)||(19884880-19885080)
chr4 (43-199)||(14604628-14604784)
chr4 (1-199)||(56034753-56034949)
chr4 (4-191)||(13575873-13576045)
chr4 (43-199)||(37435242-37435398)
chr4 (1-172)||(29680306-29680476)
chr4 (1-199)||(45833573-45833786)
chr4 (58-191)||(54680147-54680280)
chr4 (43-191)||(29121608-29121757)
chr4 (39-199)||(19620813-19620972)
chr4 (43-172)||(9141096-9141226)
chr4 (56-191)||(22675279-22675414)
chr4 (4-191)||(10693031-10693237)
chr4 (4-191)||(10906797-10907003)
chr4 (4-108)||(14571204-14571308)
chr4 (41-198)||(3105172-3105331)
chr4 (77-172)||(3395894-3395989)
chr4 (4-191)||(3793303-3793473)
chr4 (43-193)||(16632673-16632823)
chr4 (106-191)||(3497931-3498016)
chr4 (31-193)||(16940184-16940352)
chr4 (8-103)||(413186-413281)
chr4 (43-172)||(12601334-12601464)
chr4 (77-191)||(55732063-55732177)
chr4 (4-198)||(6517665-6517879)
chr4 (1-167)||(14833575-14833751)
chr4 (43-172)||(6641916-6642044)
chr4 (94-199)||(12810915-12811020)
chr4 (39-199)||(14904040-14904216)
chr4 (14-108)||(22191028-22191122)
chr4 (94-191)||(16853765-16853862)
chr4 (11-108)||(39419571-39419668)
chr4 (94-171)||(55380528-55380605)
chr4 (77-160)||(8105939-8106023)
chr4 (77-192)||(17247528-17247644)
chr4 (27-107)||(20977632-20977712)
chr4 (7-66)||(17247426-17247485)
chr4 (77-198)||(25650861-25650984)
chr4 (7-108)||(9751375-9751477)
chr4 (11-108)||(15474978-15475076)
chr4 (4-90)||(17398529-17398615)
chr4 (27-108)||(27188493-27188574)
chr4 (44-103)||(8105889-8105948)
chr4 (1-66)||(3395769-3395834)
chr4 (43-108)||(3499475-3499540)
chr4 (43-108)||(17700623-17700688)
chr4 (43-108)||(40860892-40860957)
chr4 (1-64)||(3483900-3483963)
chr4 (7-108)||(38514053-38514155)
chr4 (4-53)||(54680108-54680157)
chr4 (131-191)||(413332-413391)
chr4 (31-103)||(25650975-25651047)
chr4 (57-104)||(3486351-3486398)
chr4 (94-192)||(40846368-40846467)
chr4 (39-90)||(55380490-55380541)
chr4 (90-172)||(17540700-17540782)
chr4 (43-91)||(17247477-17247525)
chr4 (1-53)||(19911760-19911812)
chr4 (1-53)||(23123610-23123662)
chr4 (43-91)||(40846334-40846382)
chr4 (77-199)||(14153699-14153824)
chr4 (25-63)||(14153874-14153912)
chr4 (43-172)||(15139463-15139592)
chr4 (1-41)||(12811070-12811110)
chr4 (1-53)||(14904236-14904288)
chr4 (130-166)||(33378757-33378793)
chr4 (46-107)||(1672641-1672702)
chr4 (46-107)||(1675116-1675177)
chr4 (26-116)||(10750892-10750984)
chr4 (26-116)||(10964661-10964753)
chr4 (123-172)||(11901530-11901579)
chr4 (4-73)||(16853663-16853732)
chr4 (26-116)||(17276417-17276509)
chr4 (26-116)||(19944051-19944143)
chr4 (120-193)||(23750757-23750829)
chr4 (26-116)||(25089150-25089242)
chr4 (26-116)||(36029333-36029425)
chr4 (26-116)||(49518579-49518671)
chr4 (43-116)||(4948779-4948854)
chr4 (43-116)||(16256313-16256388)
chr4 (43-116)||(16266906-16266981)
chr4 (43-116)||(19954703-19954778)
chr4 (43-116)||(20648375-20648450)
chr4 (1-53)||(23750699-23750751)
chr4 (1-37)||(37435431-37435467)
chr4 (43-116)||(52704232-52704307)
[»] chr1 (94 HSPs)
chr1 (1-199)||(32785636-32785834)
chr1 (27-199)||(16234995-16235168)
chr1 (1-199)||(22599865-22600078)
chr1 (25-199)||(36134395-36134570)
chr1 (4-193)||(22427048-22427252)
chr1 (43-198)||(2268767-2268923)
chr1 (77-199)||(1900607-1900729)
chr1 (42-191)||(2267295-2267444)
chr1 (4-191)||(2834875-2835079)
chr1 (76-199)||(22154147-22154270)
chr1 (13-146)||(12284651-12284782)
chr1 (4-191)||(39200716-39200887)
chr1 (1-187)||(7310002-7310185)
chr1 (43-199)||(33256036-33256193)
chr1 (43-199)||(33276208-33276365)
chr1 (4-133)||(35040351-35040480)
chr1 (4-198)||(44821227-44821440)
chr1 (1-199)||(10757606-10757800)
chr1 (77-191)||(25448224-25448339)
chr1 (77-198)||(29216057-29216178)
chr1 (77-198)||(2327092-2327214)
chr1 (7-172)||(26701854-26702019)
chr1 (43-199)||(35402047-35402215)
chr1 (94-199)||(1578124-1578229)
chr1 (25-139)||(21029001-21029114)
chr1 (43-173)||(21191590-21191719)
chr1 (94-199)||(19717796-19717901)
chr1 (1-172)||(28492146-28492300)
chr1 (43-199)||(23036201-23036369)
chr1 (77-199)||(38282857-38282979)
chr1 (77-164)||(20954173-20954261)
chr1 (77-187)||(22464486-22464597)
chr1 (42-153)||(30893301-30893412)
chr1 (43-166)||(19170061-19170191)
chr1 (7-104)||(21120867-21120964)
chr1 (9-191)||(21984777-21984962)
chr1 (8-108)||(42284807-42284907)
chr1 (43-191)||(21204621-21204772)
chr1 (11-108)||(37642431-37642529)
chr1 (4-108)||(21544198-21544303)
chr1 (43-108)||(21703052-21703117)
chr1 (94-199)||(48704491-48704596)
chr1 (59-198)||(30572421-30572563)
chr1 (8-108)||(19215790-19215888)
chr1 (7-104)||(21134963-21135060)
chr1 (77-191)||(10251266-10251382)
chr1 (25-172)||(17024693-17024837)
chr1 (1-53)||(20954317-20954369)
chr1 (45-144)||(12613535-12613633)
chr1 (41-108)||(23024982-23025049)
chr1 (43-140)||(46089219-46089318)
chr1 (77-198)||(48569895-48570022)
chr1 (43-108)||(34255304-34255369)
chr1 (4-66)||(2327272-2327334)
chr1 (4-66)||(21702998-21703060)
chr1 (7-64)||(22464643-22464700)
chr1 (43-103)||(48570013-48570073)
chr1 (49-108)||(10251221-10251280)
chr1 (4-66)||(48570065-48570127)
chr1 (4-61)||(10251161-10251218)
chr1 (1-53)||(1900529-1900581)
chr1 (109-198)||(21703136-21703227)
chr1 (90-172)||(18896299-18896381)
chr1 (141-191)||(35040474-35040524)
chr1 (61-109)||(20954246-20954295)
chr1 (43-107)||(22464584-22464649)
chr1 (142-191)||(25448061-25448110)
chr1 (4-53)||(29215982-29216031)
chr1 (1-37)||(38282750-38282786)
chr1 (58-112)||(22201552-22201607)
chr1 (94-166)||(23025053-23025128)
chr1 (4-66)||(17371211-17371273)
chr1 (43-108)||(17371280-17371346)
chr1 (4-66)||(46089165-46089227)
chr1 (58-107)||(1900571-1900620)
chr1 (26-116)||(7507672-7507764)
chr1 (26-116)||(7518269-7518361)
chr1 (1-57)||(12284607-12284661)
chr1 (123-172)||(20109686-20109735)
chr1 (26-116)||(51628949-51629041)
chr1 (26-116)||(51656210-51656302)
chr1 (43-116)||(4167612-4167687)
chr1 (56-116)||(4178266-4178326)
chr1 (43-116)||(5639489-5639564)
chr1 (43-116)||(5650046-5650121)
chr1 (43-116)||(19179313-19179388)
chr1 (43-116)||(19188173-19188248)
chr1 (134-166)||(22019680-22019712)
chr1 (1-37)||(22154041-22154077)
chr1 (134-166)||(22655822-22655854)
chr1 (134-166)||(23065278-23065310)
chr1 (134-166)||(26547961-26547993)
chr1 (43-116)||(33084915-33084990)
chr1 (43-116)||(35013275-35013350)
[»] chr2 (107 HSPs)
chr2 (4-191)||(20151767-20151954)
chr2 (4-191)||(6573855-6574042)
chr2 (1-199)||(23235186-23235398)
chr2 (16-191)||(28711429-28711606)
chr2 (42-172)||(25829337-25829468)
chr2 (77-199)||(22317881-22318003)
chr2 (45-193)||(9015086-9015234)
chr2 (43-193)||(30667224-30667374)
chr2 (43-172)||(22260639-22260769)
chr2 (1-152)||(28140391-28140540)
chr2 (1-204)||(19540595-19540794)
chr2 (43-172)||(20568485-20568615)
chr2 (42-199)||(24576283-24576440)
chr2 (58-199)||(30621437-30621578)
chr2 (58-199)||(30624058-30624199)
chr2 (4-108)||(28550744-28550848)
chr2 (77-191)||(28700928-28701043)
chr2 (27-172)||(39037392-39037537)
chr2 (94-199)||(13963719-13963824)
chr2 (43-172)||(24850402-24850530)
chr2 (7-108)||(40332261-40332362)
chr2 (77-198)||(31800595-31800717)
chr2 (94-199)||(38781666-38781771)
chr2 (43-199)||(21536958-21537113)
chr2 (43-146)||(40782704-40782808)
chr2 (7-104)||(1586862-1586959)
chr2 (4-108)||(31967869-31967973)
chr2 (77-199)||(38631222-38631345)
chr2 (82-199)||(25036977-25037094)
chr2 (82-199)||(25041084-25041201)
chr2 (4-108)||(44840603-44840705)
chr2 (13-103)||(6392824-6392914)
chr2 (42-191)||(31327672-31327817)
chr2 (42-191)||(31334393-31334538)
chr2 (1-90)||(24377280-24377369)
chr2 (43-107)||(33074460-33074524)
chr2 (77-198)||(33074511-33074633)
chr2 (98-191)||(45086851-45086945)
chr2 (77-192)||(34321619-34321736)
chr2 (94-193)||(18376652-18376751)
chr2 (41-108)||(22776131-22776198)
chr2 (41-108)||(22781509-22781576)
chr2 (77-191)||(22802743-22802858)
chr2 (94-172)||(22187855-22187933)
chr2 (4-66)||(35743860-35743922)
chr2 (1-99)||(22317773-22317886)
chr2 (43-172)||(22454726-22454855)
chr2 (43-166)||(23392416-23392544)
chr2 (43-108)||(22785466-22785531)
chr2 (44-101)||(22802693-22802750)
chr2 (94-199)||(24377356-24377460)
chr2 (93-150)||(30557046-30557103)
chr2 (7-87)||(3277204-3277284)
chr2 (43-103)||(30557110-30557170)
chr2 (43-107)||(45086969-45087033)
chr2 (45-172)||(22272367-22272493)
chr2 (57-172)||(44881398-44881512)
chr2 (94-152)||(10009524-10009582)
chr2 (4-66)||(22785523-22785585)
chr2 (45-103)||(28701034-28701092)
chr2 (4-66)||(31327823-31327885)
chr2 (4-66)||(31334544-31334606)
chr2 (4-66)||(34321794-34321856)
chr2 (111-198)||(1586749-1586838)
chr2 (2-71)||(13963829-13963898)
chr2 (1-53)||(25037128-25037180)
chr2 (1-53)||(25041235-25041287)
chr2 (43-103)||(34321727-34321787)
chr2 (43-103)||(35743808-35743868)
chr2 (43-90)||(10009569-10009616)
chr2 (43-90)||(22187920-22187967)
chr2 (94-198)||(3277274-3277380)
chr2 (58-108)||(14581685-14581735)
chr2 (4-66)||(30557177-30557239)
chr2 (109-152)||(6392937-6392980)
chr2 (109-172)||(19115425-19115488)
chr2 (122-172)||(20569773-20569823)
chr2 (94-144)||(23184111-23184161)
chr2 (94-144)||(23595368-23595418)
chr2 (1-37)||(20568635-20568671)
chr2 (1-53)||(22187971-22188023)
chr2 (4-67)||(1084188-1084251)
chr2 (93-172)||(18430675-18430754)
chr2 (94-172)||(25189638-25189717)
chr2 (109-168)||(26618847-26618906)
chr2 (2-53)||(30621396-30621447)
chr2 (2-53)||(30624017-30624068)
chr2 (27-73)||(18376755-18376801)
chr2 (132-166)||(24793727-24793761)
chr2 (132-166)||(24814302-24814336)
chr2 (76-175)||(1084328-1084429)
chr2 (1-53)||(7609141-7609191)
chr2 (26-116)||(11394909-11395001)
chr2 (26-116)||(11405225-11405317)
chr2 (95-198)||(14581740-14581845)
chr2 (43-116)||(4210290-4210365)
chr2 (43-116)||(9897328-9897403)
chr2 (43-116)||(9907916-9907991)
chr2 (1-37)||(10009634-10009670)
chr2 (56-116)||(11388563-11388623)
chr2 (43-116)||(20070635-20070710)
chr2 (43-116)||(20236793-20236868)
chr2 (1-37)||(25829313-25829349)
chr2 (56-116)||(36251615-36251675)
chr2 (43-116)||(40222732-40222807)
chr2 (43-116)||(40251593-40251668)
chr2 (94-170)||(41121492-41121568)
[»] scaffold0005 (3 HSPs)
scaffold0005 (43-199)||(212594-212750)
scaffold0005 (4-108)||(246068-246172)
scaffold0005 (1-167)||(5948-6124)
[»] scaffold0022 (3 HSPs)
scaffold0022 (2-172)||(39611-39781)
scaffold0022 (2-172)||(137671-137841)
scaffold0022 (43-172)||(159310-159437)
[»] scaffold1359 (2 HSPs)
scaffold1359 (44-191)||(410-557)
scaffold1359 (4-198)||(1494-1690)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-183)||(27175-27355)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-199)||(143273-143487)
[»] scaffold0359 (1 HSPs)
scaffold0359 (43-199)||(5405-5562)
[»] scaffold0116 (1 HSPs)
scaffold0116 (43-192)||(20692-20841)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-172)||(32670-32842)
scaffold0084 (3-173)||(49519-49688)
scaffold0084 (4-68)||(205-269)
[»] scaffold0290 (1 HSPs)
scaffold0290 (43-193)||(18341-18491)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-199)||(4661-4873)
[»] scaffold0217 (5 HSPs)
scaffold0217 (1-193)||(19216-19425)
scaffold0217 (43-198)||(21830-21987)
scaffold0217 (4-108)||(9745-9849)
scaffold0217 (4-66)||(21994-22056)
scaffold0217 (109-192)||(9868-9953)
[»] scaffold0426 (1 HSPs)
scaffold0426 (8-172)||(13818-13981)
[»] scaffold0210 (1 HSPs)
scaffold0210 (39-192)||(1866-2020)
[»] scaffold0026 (4 HSPs)
scaffold0026 (42-199)||(8135-8293)
scaffold0026 (43-199)||(60255-60412)
scaffold0026 (43-172)||(115760-115889)
scaffold0026 (43-89)||(151714-151760)
[»] scaffold0334 (1 HSPs)
scaffold0334 (43-199)||(10034-10190)
[»] scaffold0065 (1 HSPs)
scaffold0065 (42-170)||(1943-2071)
[»] scaffold1331 (1 HSPs)
scaffold1331 (25-191)||(332-515)
[»] scaffold0247 (1 HSPs)
scaffold0247 (4-141)||(23350-23488)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-193)||(103757-103947)
[»] scaffold0771 (2 HSPs)
scaffold0771 (43-172)||(716-845)
scaffold0771 (1-53)||(660-712)
[»] scaffold0043 (1 HSPs)
scaffold0043 (5-191)||(78086-78290)
[»] scaffold0337 (1 HSPs)
scaffold0337 (42-172)||(14901-15031)
[»] scaffold0411 (2 HSPs)
scaffold0411 (43-199)||(12450-12607)
scaffold0411 (9-37)||(12402-12430)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-175)||(35403-35578)
[»] scaffold0035 (4 HSPs)
scaffold0035 (43-199)||(19188-19344)
scaffold0035 (77-192)||(98896-99013)
scaffold0035 (48-103)||(99004-99059)
scaffold0035 (11-66)||(99071-99126)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-193)||(5674-5865)
[»] scaffold0120 (2 HSPs)
scaffold0120 (43-199)||(36490-36645)
scaffold0120 (43-199)||(42360-42515)
[»] scaffold0146 (1 HSPs)
scaffold0146 (39-193)||(15323-15476)
[»] scaffold1434 (2 HSPs)
scaffold1434 (43-147)||(553-658)
scaffold1434 (1-37)||(676-712)
[»] scaffold0473 (1 HSPs)
scaffold0473 (4-191)||(2447-2637)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-199)||(60599-60795)
[»] scaffold0227 (2 HSPs)
scaffold0227 (94-199)||(22952-23057)
scaffold0227 (1-64)||(22861-22924)
[»] scaffold0485 (2 HSPs)
scaffold0485 (76-192)||(9098-9213)
scaffold0485 (1-53)||(9282-9332)
[»] scaffold0364 (1 HSPs)
scaffold0364 (7-172)||(6197-6359)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-193)||(9858-10033)
[»] scaffold0249 (1 HSPs)
scaffold0249 (8-108)||(17596-17696)
[»] scaffold0056 (3 HSPs)
scaffold0056 (4-108)||(34634-34738)
scaffold0056 (43-108)||(25480-25545)
scaffold0056 (43-87)||(36013-36057)
[»] scaffold0011 (4 HSPs)
scaffold0011 (4-108)||(65250-65354)
scaffold0011 (4-66)||(144337-144399)
scaffold0011 (94-198)||(135107-135213)
scaffold0011 (109-198)||(65140-65231)
[»] scaffold0452 (1 HSPs)
scaffold0452 (77-191)||(1589-1704)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-153)||(15980-16130)
[»] scaffold0015 (2 HSPs)
scaffold0015 (4-103)||(60989-61088)
scaffold0015 (109-198)||(61111-61202)
[»] scaffold0012 (3 HSPs)
scaffold0012 (77-191)||(215202-215317)
scaffold0012 (4-66)||(215360-215422)
scaffold0012 (43-81)||(215330-215368)
[»] scaffold0439 (2 HSPs)
scaffold0439 (77-198)||(6423-6545)
scaffold0439 (4-66)||(6603-6665)
[»] scaffold0004 (7 HSPs)
scaffold0004 (43-172)||(220478-220607)
scaffold0004 (94-198)||(377291-377395)
scaffold0004 (94-172)||(30612-30689)
scaffold0004 (48-172)||(243995-244118)
scaffold0004 (1-53)||(377433-377485)
scaffold0004 (46-103)||(211639-211696)
scaffold0004 (77-141)||(211687-211752)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-167)||(30409-30585)
[»] scaffold0176 (1 HSPs)
scaffold0176 (4-103)||(9340-9439)
[»] scaffold0479 (2 HSPs)
scaffold0479 (94-192)||(10228-10326)
scaffold0479 (1-90)||(10154-10241)
[»] scaffold0243 (1 HSPs)
scaffold0243 (94-172)||(4751-4829)
[»] scaffold0083 (2 HSPs)
scaffold0083 (94-172)||(25733-25811)
scaffold0083 (1-53)||(25849-25901)
[»] scaffold0422 (2 HSPs)
scaffold0422 (4-108)||(11931-12035)
scaffold0422 (109-165)||(12055-12112)
[»] scaffold0028 (3 HSPs)
scaffold0028 (77-191)||(5307-5422)
scaffold0028 (25-66)||(5462-5503)
scaffold0028 (43-116)||(14990-15065)
[»] scaffold0527 (4 HSPs)
scaffold0527 (7-108)||(57-158)
scaffold0527 (7-108)||(8120-8221)
scaffold0527 (109-198)||(177-267)
scaffold0527 (109-198)||(8240-8330)
[»] scaffold0471 (3 HSPs)
scaffold0471 (77-198)||(3610-3733)
scaffold0471 (4-66)||(3490-3552)
scaffold0471 (43-103)||(3559-3619)
[»] scaffold0414 (3 HSPs)
scaffold0414 (4-69)||(7016-7081)
scaffold0414 (77-198)||(6851-6976)
scaffold0414 (68-107)||(6963-7002)
[»] scaffold0275 (2 HSPs)
scaffold0275 (46-107)||(8511-8572)
scaffold0275 (77-141)||(8559-8624)
[»] scaffold0081 (1 HSPs)
scaffold0081 (43-172)||(40886-41014)
[»] scaffold0177 (1 HSPs)
scaffold0177 (8-108)||(20213-20314)
[»] scaffold0016 (1 HSPs)
scaffold0016 (43-108)||(938-1003)
[»] scaffold0395 (1 HSPs)
scaffold0395 (43-199)||(13248-13403)
[»] scaffold0064 (1 HSPs)
scaffold0064 (43-166)||(43652-43775)
[»] scaffold0607 (1 HSPs)
scaffold0607 (83-198)||(7195-7312)
[»] scaffold0151 (1 HSPs)
scaffold0151 (43-108)||(11616-11681)
[»] scaffold0045 (1 HSPs)
scaffold0045 (43-108)||(87417-87482)
[»] scaffold0488 (1 HSPs)
scaffold0488 (129-191)||(11325-11387)
[»] scaffold0352 (1 HSPs)
scaffold0352 (7-108)||(651-752)
[»] scaffold0040 (1 HSPs)
scaffold0040 (57-172)||(1246-1360)
[»] scaffold0069 (1 HSPs)
scaffold0069 (58-108)||(5169-5219)
[»] scaffold0025 (2 HSPs)
scaffold0025 (43-91)||(74821-74869)
scaffold0025 (94-172)||(74855-74933)
[»] scaffold0570 (1 HSPs)
scaffold0570 (4-66)||(1540-1603)
[»] scaffold0387 (2 HSPs)
scaffold0387 (7-66)||(7561-7620)
scaffold0387 (43-108)||(7612-7677)
[»] scaffold0324 (1 HSPs)
scaffold0324 (94-172)||(10229-10308)
[»] scaffold0132 (1 HSPs)
scaffold0132 (4-67)||(37946-38009)
[»] scaffold0908 (1 HSPs)
scaffold0908 (130-175)||(3608-3653)
[»] scaffold0655 (2 HSPs)
scaffold0655 (57-116)||(8655-8714)
scaffold0655 (134-166)||(5462-5494)
[»] scaffold0269 (1 HSPs)
scaffold0269 (109-175)||(7615-7682)
[»] scaffold0297 (1 HSPs)
scaffold0297 (130-164)||(17318-17352)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-166)||(6246-6280)
[»] scaffold0747 (1 HSPs)
scaffold0747 (43-104)||(3205-3268)
[»] scaffold0280 (1 HSPs)
scaffold0280 (134-166)||(17532-17564)
[»] scaffold0185 (1 HSPs)
scaffold0185 (134-166)||(9649-9681)
[»] scaffold0002 (1 HSPs)
scaffold0002 (134-166)||(156360-156392)


Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 109)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 33691689 - 33691491
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33691689 gtcttgcatctcctgatgaactagagcttctggtgattttcaacttctaatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 33691590  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33691589 agcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgtctatg 33691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 30026086 - 30026284
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||     
T  30026086 gtcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaga 30026185  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  30026186 agcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatg 30026284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2500219 - 2500418
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||  ||| |||||||||||||||  |||||||||||||||||||||| |||| |||||| ||||||| ||||||||| ||||||||    
T  2500219 gtcttgcatctcctgaaaaacaagagcttctggtgatcctcagcttctgatgaacttgcttatgatgacgtcatcacttcatgagcacttttgtcttcag 2500318  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  2500319 gagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatg 2500418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2913585 - 2913386
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||| |||| ||||||  |||||||||||||||| ||||||||    
T  2913585 gtcttgcatctcctgatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatgacgtcattacttcaggagcacttttgtcttcag 2913486  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  2913485 gagcacttctcttcatatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctactaaagatatcaaatttttgtctatg 2913386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 44 - 191
Target Start/End: Original strand, 14426752 - 14426899
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattc 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  14426752 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattc 14426851  T
Q  144 ctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  14426852 ctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 14426899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 16542996 - 16542810
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||    
T  16542996 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagc 16542897  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||    
T  16542896 agttttcttcagacg-cttaagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaaatttt 16542810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 16622666 - 16622852
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||    
T  16622666 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagc 16622765  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||    
T  16622766 agttttcttcagacg-cttaagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaaatttt 16622852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 13880341 - 13880497
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  13880341 gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactttgacttcagaagcacttctcttcagacgctttaagcttcctttttgttgatt 13880440  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||    
T  13880441 cctttgctctcttttgttcttccagaacctatttaagatgtcaaatttatgtctatg 13880497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 44467246 - 44467443
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||| |  |||||||    
T  44467246 gtcttgcatctcctgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatggcgtcatcacttcaggagcactata-cttcagg 44467344  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||| | || || ||||||||||||||||||| ||||||| | ||||||||||||||||| |||| ||||||||||||||| |||||    
T  44467345 agcacttctcttcagatgcttcaaacttcctttttgttgattccattgctctattttgttcttccagaacctatttatgatgtcaaatttttgtctatg 44467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 28622332 - 28622139
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccactt------caggagcactttgtcttc 97  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||      ||||||||||||||||||    
T  28622332 ttgcatctcctgatgaactgcagcttctggtgatttttagcttatgatgaacttgcttctgatgacgtcaccactttgtcttcaggagcactttgtcttc 28622233  T
Q  98 aggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | ||||| |  |||||| ||| |||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  28622232 atgagcagtattcttcatacgctttaagcttcatttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 28622139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 9709778 - 9709606
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||    
T  9709778 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatg---------------acgtcaccacttcaggagcactttgtcttcaggagc 9709694  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  9709693 agttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaaatttt 9709606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 30945312 - 30945163
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  30945312 cagcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgttttaagcttcctttttgttga 30945213  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
     || |||||||| | ||||||||| |  ||| ||||||||| |||||||||    
T  30945212 ctcatttgctcttttttgttcttcaaagacc-ttttaagatatcaaatttt 30945163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 48236878 - 48236707
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||            
T  48236878 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttcaggagtactttgtct-------- 48236787  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
            ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  48236786 --------tcagacgctttaagcttcctttttgttgattcctttactctttattgttcttccaagacctttttaagatgtcaaatttt 48236707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10883150 - 10882965
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg--------------aacttgcttctgataacgtcaccacttcaggagc 86  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||              |||||||||||||  |||||  ||||||||||||    
T  10883150 gtcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtcacttcaggagc 10883051  T
Q  87 actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10883050 actttgacttcagtagcacttctcttcagacgctttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 10882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 13648934 - 13649092
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||| ||| |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  13648934 agcttctgttgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttga 13649033  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| ||||||||| |||||||  | ||||| ||||||||||| |||||    
T  13649034 ttcctttgctctcttttgttcttctagaacctaataaagatatcaaatttttgtctatg 13649092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15088701 - 15088882
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||                 |||    
T  15088701 gtcttgcatctcctgatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatgacgtcatcacttc-----------------agg 15088783  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||    
T  15088784 agcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtaaaatttttgtctatg 15088882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 11319642 - 11319771
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||||||||| | || |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11319642 gcttctgatgaacttgcttttaatgacgtcatcacttcaggagcactttggcttcaggagcacttctcttcagacgctttaagcttcctttttgttgatt 11319741  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
     | ||||||||| |||||||||||||||||    
T  11319742 tcattgctctcttttgttcttccagaacct 11319771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 14193311 - 14193472
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||| || ||||||| |||||||||||    
T  14193311 gcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagacgcttcaagcttcatttttgttgat 14193410  T
Q  142 tc----ctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||     || ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14193411 tctttaattagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 14193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 13692577 - 13692707
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||  ||||    
T  13692577 gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttcctttttcctgat 13692676  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||| |||||||||||||||||    
T  13692677 tcctttgctctcttttgttcttccagaacct 13692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 33605868 - 33606072
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttg----------- 92  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| | | ||||||| |||||||||||| ||||||||||||               
T  33605868 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatgacgtcaccactttaggagcactttgtcttcatgagc 33605967  T
Q  93 ------tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 186  Q
          ||||||||| || || |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  33605968 gatttgtcttcaggaacagttttcttcagatgttttaagcttccttattgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33606067  T
Q  187 atttt 191  Q
    |||||    
T  33606068 atttt 33606072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 28409275 - 28409427
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    |||  |||||||||||||||||| || || |||||||||||| ||||    
T  28409275 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt----tcaatagcacttctcttcagacgcttcaaacttcctttttgtcgatt 28409370  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||    
T  28409371 catttgctctcttttgttcttacagaacctatttaagatgtcaaatttttgtctatg 28409427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 30944279 - 30944130
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    ||||||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||    
T  30944279 cagcttctgatgaacgtgcttctgatggcttcaccacttcaggagcactttgtcttcaggagcagttttcttcaaacgctttaagcttcctttttgttga 30944180  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||| |||||||| ||||||||||| |  ||| ||||||||| |||||||||    
T  30944179 ttcatttgctctttattgttcttcaaagacc-ttttaagatatcaaatttt 30944130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29935336 - 29935143
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||||||||||| ||  |||||||||||  | ||||||||| || ||| |||||||||||||||| | ||||||     
T  29935336 gtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagat-gcttctgatgacatcatcacttcaggagcactt-gacttcaga 29935241  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |  ||||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | | ||| ||||||||||| |||||    
T  29935240 aa-acttctcttgagacgatttaagcttcctttttgttgattccttagctctcttttgttcttccagaacctaataatgatatcaaatttttgtctatg 29935143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 4494725 - 4494866
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctat 156  Q
    |||||||||| |||||| ||||||||||||||| |  ||||||||||||||||||| ||| | || |||||||||||||||||||| | ||||||||| |    
T  4494725 tgcttctgatgacgtcatcacttcaggagcactata-cttcaggagcacttctctttagatgcttcaagcttcctttttgttgatttcattgctctcttt 4494823  T
Q  157 tgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
     ||||||||||||||| |||||||||||||||||||| |||||    
T  4494824 cgttcttccagaacctatttaagatgtcaaatttttgtctatg 4494866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 22577944 - 22577792
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgt--tttaagcttcctttttgttga 140  Q
    ||||||||||| ||||||||| || |||||| |||||||||||||||||  |||||||||||||||||||| |  |   || ||||||||||||||||||    
T  22577944 gcttctgatgaccttgcttctaatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttctggagcacttcaagcttcctttttgttga 22577845  T
Q  141 ttcctttgctctc-tattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||| ||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  22577844 ttcatttgctctccttttgttcttccagaacctatttaagatgtcaaattttt 22577792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 12366671 - 12366515
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||| ||||||| | |||| |||||||||||||||||   |||||||||||||||||| ||| | || ||||||||||||||||||||    
T  12366671 gcttttgatgaacttgattctgatgatgtcatcacttcaggagcactttaaattcaggagcacttctctttagatgcttcaagcttcctttttgttgatt 12366572  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||||||||| || ||||||||||||||  | ||||| ||||||||||| |||||    
T  12366571 ccattgctctctttttttcttccagaacctaataaagatatcaaatttttgtctatg 12366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13137872 - 13137689
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||| ||               ||||| |||||||||||||||||| |||||||    
T  13137872 gtcttgcatctccttatgaactagagcttctggtgatcttcagcttttgaaga---------------cgtcatcacttcaggagcactttgacttcagg 13137788  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||| | || ||||||||||||||||||||||||  |||||| |||||||||||||||||  | ||||  ||||||||||| |||||    
T  13137787 agcacttctcttcagatgcttcaagcttcctttttgttgattccttacctctcttttgttcttccagaacctaataaagagatcaaatttttgtctatg 13137689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 199
Target Start/End: Complemental strand, 48800524 - 48800406
Alignment:
Q  81 aggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaaga 180  Q
    |||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||||| |||||||||||||||||  | ||||    
T  48800524 aggagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctaataaaga 48800425  T
Q  181 tgtcaaatttttgcctatg 199  Q
    | ||||||||||| |||||    
T  48800424 tatcaaatttttgtctatg 48800406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 21381409 - 21381287
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||  |||||||||||||   |||||||||||||||| ||||||||| |||||| |||||||| ||||||||| ||| ||||||||||    
T  21381409 atctcctgatgaactgcagcttctggtgatacacagcttctgatgaactagcttctgatgacgtcatcacttcagaagcactttgactttaggagcactt 21381310  T
Q  108 ctcttcagacgttttaagcttcc 130  Q
     |||||||||| |||||||||||    
T  21381309 ttcttcagacgctttaagcttcc 21381287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 12174195 - 12174090
Alignment:
Q  93 tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||||||| |||||    
T  12174195 tcttcaggagtagttttcttcagacgttttaagcttcttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaatttttt 12174096  T
Q  193 gcctat 198  Q
    | ||||    
T  12174095 gtctat 12174090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 27871892 - 27872089
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggag 102  Q
    |||||| ||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||    |||||||||    
T  27871892 ttgcatttcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcattacttcaggagcacttcacacttcaggag 27871991  T
Q  103 cacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    || || |||||||||| ||||||||| |||||||||||||    ||||||| || |||||||||||  |||  |||||||| || |||||||| ||||    
T  27871992 cagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagaccaatttaagatatcgaatttttgtctat 27872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 13880828 - 13880958
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||  | ||||| |||||||| | || |||||||||| |||||||||    
T  13880828 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-ttgacttcataaccacttttcttcagatgcttcaagcttccttcttgttgatt 13880926  T
Q  143 cctttgctctctattgttcttccagaaccttt 174  Q
    || ||||||||  |||||||||||||||||||    
T  13880927 ccattgctctcatttgttcttccagaaccttt 13880958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 15469777 - 15469860
Alignment:
Q  116 acgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15469777 acgttttaagcttcgtatttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaatttttgtctatg 15469860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 14425619 - 14425815
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||    || ||| || |||||||||||||||| |||||| |||||||| |||||||||||||| | |||    
T  14425619 ttgcatctcctgatgaactntagcttctggtgaaacacancttttgntgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcngtagc 14425718  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    | || |||||||||  ||||||||| |||||||||||||    ||||||| || |||||||||||  |||  |||||||| ||||| ||||| ||||    
T  14425719 agttttcttcagacactttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagaccaatttaagatatcaaaattttgtctat 14425815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 19339231 - 19339131
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||    
T  19339231 atctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgaggacgtcatcacttcagaagcactttgtcttcaggagcactt 19339132  T
Q  108 c 108  Q
    |    
T  19339131 c 19339131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 1293183 - 1293250
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1293183 cagcttctgatgaacttgcttctgataacgtcatcacttcaggagcactttgtcttcaggagcacttc 1293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21695582 - 21695768
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||| |||| |||||| ||                 ||||| |    
T  21695582 gtcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatgacgtcatca-----------------cttcaag 21695664  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatgc 200  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||  |||||| |||||||||||||||||  | |||||  |||||||||| |||||     
T  21695665 agcacttctcttcaaacgattcaagcttcctttttgttgattccttaactctcttttgttcttccagaacctaataaagataccaaatttttgtctatgg 21695764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 35952542 - 35952443
Alignment:
Q  93 tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||| |||||    
T  35952542 tcttcaagagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaggcctttttaagatgtcaatttttt 35952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 23279879 - 23279805
Alignment:
Q  125 gcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  23279879 gcttcctttttgttgattcttttgctctctattgttcttccagaacctttttatgatgtcaaatttttgtctatg 23279805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 7339821 - 7339656
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc-----------------acttctcttcagacgttttaag 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||                 |||| |||||||||| ||||||    
T  7339821 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcactttttcttcatgaacacttttcttcagacgctttaag 7339722  T
Q  126 cttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | |||||||| || |||| |||||||| |||||||||||||  || ||||||||||| ||||||||    
T  7339721 catcctttttttttattcatttgctctttattgttcttccaagacatttttaagatgacaaatttt 7339656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 16111860 - 16111655
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtctt------- 96  Q
    |||||||  ||||| ||||  |||||||||||||||| | ||||| || |||||||||||||| |||||| ||||||| ||||||||||||||           
T  16111860 ttgcatcctctgatcaactgcagcttctggtgatttttatcttctaataaacttgcttctgatgacgtcatcacttcacgagcactttgtctttagaagc 16111761  T
Q  97 ----------caggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttcc-agaacctttttaagatgtca 185  Q
              |||||||| || |||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| ||| | ||||||||||||||    
T  16111760 gccttatcttcaggagcatttttcttcagacgctttaagcttcctttttgttgattccttttctctttattgttcttccaagaccttttttaagatgtca 16111661  T
Q  186 aatttt 191  Q
    | ||||    
T  16111660 attttt 16111655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 16316446 - 16316341
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||||| |||||||| ||||||||  | ||||| |||||||||||    
T  16316446 cttcaggagcacttctctttagacgcttcaagcttcctttttgttgattccttagctctcttttgttctttcagaacctaataaagatatcaaatttttg 16316347  T
Q  194 cctatg 199  Q
     |||||    
T  16316346 tctatg 16316341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 331830 - 331932
Alignment:
Q  6 gcatctcctgatgaactagagcttctggtgattttcagcttctgatgaac--ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  331830 gcatctcctgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatgacgtcatcactttaggagcagtttgtcttcaggagc 331929  T
Q  104 act 106  Q
    |||    
T  331930 act 331932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 9069746 - 9069966
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg---------------aacttgcttctgataacgtcaccacttcaggagcac 88  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||               |||||||||||||| ||||||||||||||| |||||    
T  9069746 ttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgataaacttgcttctgatgacgtcaccacttcagaagcac 9069845  T
Q  89 tttgtcttcaggagcac-----------------ttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacc 171  Q
    |||||||||||||||||                 ||||||| ||||| |||||||       ||||||||| | |||||||||||||||| |||||||||    
T  9069846 tttgtcttcaggagcactttgacttcaggagcagttctctttagacgctttaagc-------ttgttgatttcattgctctctattgttcatccagaacc 9069938  T
Q  172 tttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||||||||| |||||    
T  9069939 tttttaagatgtcaaatttttgtctatg 9069966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 13018469 - 13018289
Alignment:
Q  16 atgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcag 115  Q
    |||||||  ||||||||||||| ||| |||||||||||  | ||||||||  |||||| |||||||||||||||    |||||||||||||| |||||||    
T  13018469 atgaacttcagcttctggtgatcttctgcttctgatgaggt-gcttctgaagacgtcatcacttcaggagcactaaa-cttcaggagcacttttcttcag 13018372  T
Q  116 acgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||| || ||||||| |  ||||||||||| ||||||||| |||||||||| ||||||  | ||||| ||||||||||| |||||    
T  13018371 acgcttgaagcttcatccttgttgattccattgctctct-ttgttcttcccgaacctaataaagatatcaaatttttgtctatg 13018289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 5000764 - 5000667
Alignment:
Q  55 cttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctct 152  Q
    |||||||||||| || ||  |||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  5000764 cttgcttctgatgacatcgtcacttcaggagcactttgacttcaggatcacttctcttcagatgtttcaaacttcctttttgttgattccttagctct 5000667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 11793195 - 11793300
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||||||| |||||| | || |||||||||||||||||||||||| ||||||| |||||||||| ||||||  | ||||| |||||||||||    
T  11793195 cttcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccttcgctctcttttgttcttcctgaacctaataaagatatcaaatttttg 11793294  T
Q  194 cctatg 199  Q
     |||||    
T  11793295 tctatg 11793300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 13303109 - 13303214
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||| ||||||||||| |||||  | | ||| |||||||||||    
T  13303109 cttcaggagcacttctcttcagacgctttaaacttcttttttgttgatttctttgctctcttttgttcttccataacctaataatgatttcaaatttttg 13303208  T
Q  194 cctatg 199  Q
     |||||    
T  13303209 tctatg 13303214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 5826170 - 5826250
Alignment:
Q  28 ttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||  |||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||    
T  5826170 ttctggtgattcacagcttctgatgaacttgcttctgatgacttcattacttcaggagcactttgtcttcaggagcacttc 5826250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 2265420 - 2265302
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||| |||||||||||||   || ||||| || |||||||||||  ||||||    
T  2265420 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtattagctctttatttgttcttccaagaccttt 2265321  T
Q  175 ttaagatgtcaaatttttg 193  Q
    |||||||||||||||||||    
T  2265320 ttaagatgtcaaatttttg 2265302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 13730579 - 13730502
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13730579 cttcaggagcacttctcttc-gacgccttaagtttcctttttgttgattcctttgctctcttttgttcttccagaacct 13730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 32264700 - 32264598
Alignment:
Q  6 gcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcac 105  Q
    |||||||||||||||||  |||||||||||||   || ||| |||||| ||| |||||||| |||||| |||||||||||||||||||||||| ||||||    
T  32264700 gcatctcctgatgaactgcagcttctggtgatacacaacttttgatgatctttcttctgatgacgtcatcacttcaggagcactttgtcttcatgagcac 32264601  T
Q  106 ttc 108  Q
    |||    
T  32264600 ttc 32264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 13260546 - 13260389
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcac-tttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||| |||| ||||| ||||||||||||| | | | || ||||||||||| |||| ||    
T  13260546 gcttatgatgaacttgcttctgatgacatcatcacttcaggagcacttttgacttcatgagcacttctctttaaatgcttcaagcttcctttatgttaat 13260447  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||  |||||| ||||||||| | |||||  | | ||| |||||||||| ||||||    
T  13260446 tccttatctctcttttgttcttcaataacctaataatgatatcaaatttttacctatg 13260389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 13031998 - 13031852
Alignment:
Q  51 tgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgct 150  Q
    |||||||||||||||| ||||||  | | ||||||||||    |||||||||||||| |||||||||| || ||||||| |  ||||||||||| |||||    
T  13031998 tgaacttgcttctgatgacgtcattaatccaggagcactaaa-cttcaggagcacttttcttcagacgcttcaagcttcatccttgttgattccattgct 13031900  T
Q  151 ctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  13031899 ctct-ttgttcttccagaacctaataaagatatcaaatttttgtctatg 13031852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15468097 - 15468232
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgat--------------gaacttgcttctgataacgtcaccacttcaggagc 86  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||              ||||||||||||||| |||||| ||||||| ||||    
T  15468097 gtcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgatgagatgcatatgatgaacttgcttctgatgacgtcatcacttcaagagc 15468196  T
Q  87 actttgtcttcaggagcacttctcttcagacgtttt 122  Q
    |||||||||||| ||||| || ||||||||||||||    
T  15468197 actttgtcttcaagagcagttttcttcagacgtttt 15468232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 39284536 - 39284452
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    ||||| ||||||| ||  ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  39284536 catcttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagtacttt 39284452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 9098165 - 9098040
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| || ||| |||||||||||||| ||| |||||| | | ||| |||||||| | || |||||||| | |||||||||    
T  9098165 gcttctaatgaacttgcttctgatgacatcatcacttcaggagcac-ttgacttcagaacctcttttcttcagatgcttcaagcttccatcttgttgatt 9098067  T
Q  143 cctttgctctctattgttcttccagaa 169  Q
    || ||||||||  ||||||||||||||    
T  9098066 ccattgctctcatttgttcttccagaa 9098040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 8183165 - 8183230
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  8183165 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactttgtctttaggagcacttc 8183230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 16556669 - 16556609
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagca 87  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  16556669 cttctggtgattttcagcttcggatgtacttgcttctgatgacgtcaccacttcaggagca 16556609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 16608993 - 16609053
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagca 87  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  16608993 cttctggtgattttcagcttcggatgtacttgcttctgatgacgtcaccacttcaggagca 16609053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 4821709 - 4821862
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcac-ttctcttc---agacgttttaagcttcctttttgtt 138  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||| | || |||||   ||  |||||   |   |  ||| ||    
T  4821709 gcttctgatgaccttgcttttgatgacgtcatcacttcaggagcactttgtcttcaggagcgctttgtcttcaggagcagttttcttcagacgctttatt 4821808  T
Q  139 gattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  4821809 gattcctttgctctttattgttcttccaagacctatttaagatgtcaaattttt 4821862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 48062751 - 48062600
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttga 140  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||    ||||||||||| || |||||||||| ||||||||| |||||||||| |    
T  48062751 gcttctgatgaacttgcttctgatggcgtcatcacttcaggagcacttcacacttcaggagcaattttcttcagacgctttaagcttccctttttgttaa 48062652  T
Q  141 ttcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |    ||||||| || |||||||||||  |||  ||||| ||||||||||||    
T  48062651 tgtacttgctctttacttgttcttccaagaccaatttaaaatgtcaaatttt 48062600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 48805795 - 48805729
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  48805795 gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 48805729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 331955 - 332043
Alignment:
Q  110 cttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||| | ||||||||||||||| |||| |||||| ||||||| ||||||||||||||||  | |||||||||||||||||| |||||    
T  331955 cttcagatgctttaagcttcctttt-gttgtttccttagctctcttttgttcttccagaaccaatataagatgtcaaatttttgtctatg 332043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23279936 - 23279875
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttc 62  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||    
T  23279936 gtcttgcatctcctgatgaactacaacttctggtgattttcaccttctgacgaacttgcttc 23279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 4821659 - 4821717
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  4821659 atctccggatgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgat 4821717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 24788381 - 24788450
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttctt 163  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||| |||||||||| ||| ||||    
T  24788381 cttcaggagcacttctcttcagatgcttcaagcttccattttgttgattcatttgctctcttttggtctt 24788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 8183111 - 8183170
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttct 63  Q
    |||||||||||||||||||  ||||||||||||||  |||||| ||||||||||||||||    
T  8183111 ttgcatctcctgatgaactgcagcttctggtgattcacagcttttgatgaacttgcttct 8183170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 12174316 - 12174254
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  |||||||||||||||| |||||||||| ||||||||||||||    
T  12174316 ttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgat 12174254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 2265495 - 2265446
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  2265495 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11793088 - 11793140
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| || ||||||||||||    
T  11793088 gtcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgatga 11793140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 19236931 - 19236804
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||| ||| |||||  | ||||  |||||||| | || | ||||||||||||||||||||    
T  19236931 ttctgacgaacttgcttctgatgacgtcatcacttcagaagcac-ttgacttcaaaatcactattcttcagatgcttcaggcttcctttttgttgattcc 19236833  T
Q  145 tttgctctcta-ttgttcttccagaacct 172  Q
     |  ||||  | |||||||||||||||||    
T  19236832 ataactcttaatttgttcttccagaacct 19236804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 41842177 - 41842077
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||||||| |||||||| |  | |||||||||||||||||||||| |  ||||| | |||||||| ||||||||  | ||||| ||||||||||    
T  41842177 cttcaggagcacttttcttcagatgcatcaagcttcctttttgttgattccataactctcaatttgttctttcagaacctaataaagatatcaaattttt 41842078  T
Q  193 g 193  Q
    |    
T  41842077 g 41842077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 24788343 - 24788394
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  24788343 ttcagcttctggtgatcttgcttctgatgacgtcatcacttcaggagcactt 24788394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14193255 - 14193305
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgat 51  Q
    |||||||||||| |||||||||||||||| ||||||| ||| |||||||||    
T  14193255 gtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgat 14193305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35952663 - 35952601
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  | |||||||||||||| |||||||||| ||||||||||||||    
T  35952663 ttgcatcctctgatgaactgcaacttctggtgatttttagcttctgataaacttgcttctgat 35952601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 48062805 - 48062743
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||| |||||||||  |||||||||||||   |||||||||||| |||||||||||||    
T  48062805 ttgcatctcttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttctgat 48062743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 2265456 - 2265411
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||    
T  2265456 gcttctgatgacgtcatcacttcaggagcactttatcttcaggagc 2265411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 16609043 - 16609086
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgt 137  Q
    ||||||||||| || |||||||||| ||||||||||||||||||    
T  16609043 cttcaggagcagttttcttcagacgctttaagcttcctttttgt 16609086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 19710987 - 19710924
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||| ||||||||||| || |||||||||| | ||| |||||||||| | ||||||||||    
T  19710987 ttgcatcttctgatgaactacagtttctggtgatatacagtttctgatgaaatagcttctgata 19710924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4429059 - 4429001
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||| ||||||||  |||||||||||||   |||||||||||||| |||||||||||    
T  4429059 atctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctgat 4429001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 8183234 - 8183340
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || | |||||||| ||||||||| |||||||||||||   |||||| | || |||||||||||  |||  ||||||||||||||| ||    
T  8183234 cttcaggagcagttttattcagacgctttaagcttccctttttgttgatgtatttgctatttatttgttcttccaagaccaatttaagatgtcaaatatt 8183333  T
Q  192 tgcctat 198  Q
    || ||||    
T  8183334 tgtctat 8183340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 12174262 - 12174216
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcact 89  Q
    |||||||||||||| |||| |||| |||||| |||||||||||||||    
T  12174262 gcttctgatgaactcgcttttgatgacgtcatcacttcaggagcact 12174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13302991 - 13303033
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcag 43  Q
    |||||||||||||| |||||||| ||||||||||||| |||||    
T  13302991 gtcttgcatctcctaatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 35952609 - 35952559
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgt 93  Q
    |||||||||||| |||||||||||  ||||| |||||||||| ||||||||    
T  35952609 gcttctgatgaatttgcttctgatgtcgtcatcacttcaggaacactttgt 35952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 5826280 - 5826353
Alignment:
Q  120 tttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| |||||||||||   |||||||| |||| |||||||||  ||| |||||||||||||||||||    
T  5826280 tttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaatttt 5826353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 11005594 - 11005686
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  11005594 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11005686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24735162 - 24735254
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  24735162 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 24735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24745109 - 24745201
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  24745109 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 24745201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 26389970 - 26389878
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  26389970 gcttctgatgactttctgcttctgatgacgttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 26389878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 26400612 - 26400520
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  26400612 gcttctgatgactttctgcttctgatgacgttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 26400520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4212420 - 4212495
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  4212420 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 4212495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4223019 - 4223094
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  4223019 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 4223094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 4428994 - 4428938
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttca 98  Q
    ||||||||||||||| ||||||||| | |||| |||||||| |||| ||||||||||    
T  4428994 gcttctgatgaactttgcttctgatgatgtcatcacttcagaagcattttgtcttca 4428938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 5685926 - 5685986
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  5685926 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5685986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 6867116 - 6867041
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  6867116 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 6867041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 6877748 - 6877673
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  6877748 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 6877673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 8998708 - 8998676
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  8998708 ttgttgattcctttgctctcttttgttcttcca 8998676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 9433673 - 9433748
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  9433673 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 9433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 11086834 - 11086802
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  11086834 ttgttgattcctttgctctcttttgttcttcca 11086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13260600 - 13260564
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  13260600 gtcttgcatctcctgatgaactttagcttctggtgat 13260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 14745560 - 14745485
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  14745560 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 14745485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 19710833 - 19710797
Alignment:
Q  130 ctttttgttgattcctttgctctctattgttcttcca 166  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19710833 ctttttgttgattcatttgctctcttttgttcttcca 19710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 20990062 - 20990137
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  20990062 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 20990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 21002899 - 21002824
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  21002899 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 21002824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22577998 - 22577962
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  22577998 gtcttgcatctcctgatgaacttcagcttctggtgat 22577962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 23264482 - 23264407
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  23264482 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 23264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 24930494 - 24930419
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  24930494 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 24930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 37344609 - 37344684
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  37344609 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 37344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 89980 - 89793
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  89980 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggaac 89881  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  89880 aattttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgtcaaatttt 89793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 131)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2561372 - 2561576
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  2561372 gtcttgcatctcctgatgaactagagcttctggtgattctcagcttctgatgaacttgcttctgatgatgtcaccacttcaagagcactttgtcttcagg 2561471  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgatt------cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgc 194  Q
    |||| ||||||||||||| |||||||||||||||||||||||      | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  2561472 agcagttctcttcagacgctttaagcttcctttttgttgattcatttgcatttgctctctattgttcttccagaacctttttaagatgtcaaatttttgt 2561571  T
Q  195 ctatg 199  Q
    |||||    
T  2561572 ctatg 2561576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28582290 - 28582503
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagctt---------------ctgatgaacttgcttctgataacgtcaccacttcaggag 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||               |||||||||||||||||||| ||||||||||||||||||    
T  28582290 gtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatgaacttgcttctgatgacgtcaccacttcaggag 28582389  T
Q  86 cactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  28582390 cactttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgatttctttactctctattgttcttccagaacctttttaagatttca 28582489  T
Q  186 aatttttgcctatg 199  Q
    |||||||| |||||    
T  28582490 aatttttgtctatg 28582503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 11223752 - 11223935
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||   |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  11223752 atctcctgatgaactgctgcttctggtgattttcagattctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagtt 11223851  T
Q  108 ctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||    
T  11223852 ctcttcagatgctttaaacttcctttttgttgattcctttgctctttattattcttccaagacctttttaagatgtcaaatttt 11223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 52920645 - 52920801
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||| | || ||||||||||||||||||||    
T  52920645 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgatt 52920744  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  52920745 ccttagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 52920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 14969511 - 14969710
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcac-tttgtcttcag 99  Q
    ||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||||||| |||| |||||| |||||||||||||| |||||||| ||    
T  14969511 gtcttgcatatcctcatgaactagagcttctggtgatcttcagcatctgatgaacttgcttatgatgacgtcatcacttcaggagcacttttgtcttaag 14969610  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||  ||||||||||| | || ||| ||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||| |||||    
T  14969611 gagcgattctcttcagatgcttcaagattcctttttgttgattcatttgctctcgtttgttcttccataacctttttaagatgtcaaatttttgtctatg 14969710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 18121540 - 18121384
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||    
T  18121540 gcttttgatgaacttgcttctgatgatgtcaccacgtcaggagcactttgtcttcaggagcagttctcttcagacgctttaagcttcatttttgttgctt 18121441  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  18121440 catttgctctctattgttcttccagaacctttttaagatgtcaaacttttgtctatg 18121384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 31303626 - 31303785
Alignment:
Q  43 gcttctgatgaacttgcttctgataa---cgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttg 139  Q
    |||||||||||||||||||||||| |   ||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  31303626 gcttctgatgaacttgcttctgatgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttg 31303725  T
Q  140 attcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| |||||||||| |||||||||||||| || |||||||||||||||||||| |||||    
T  31303726 attcttttgctctcttttgttcttccagaaactatttaagatgtcaaatttttgtctatg 31303785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12963060 - 12962891
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||| | ||||||||||| ||  |||||||||||||||||||||||| |||||| ||||||| |||||||||| |||||      
T  12963060 gtcttgcatctcctgatgaactacaacttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactttgacttcaat 12962963  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |  |||| |||||||||||||||||    
T  12962962 agcacttctcttcagacgcttcaagcttcctttttgttgattccttagtcctcttttgttcttccagaacct 12962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 47207892 - 47208098
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttc-----------------agga 84  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||                 ||||    
T  47207892 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaagttcagcttctgatgacgtcaccacttcaagagcaccttgtcttcagga 47207991  T
Q  85 gcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtc 184  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  47207992 gcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaatacctttttaagatgtc 47208091  T
Q  185 aaatttt 191  Q
    |||||||    
T  47208092 aaatttt 47208098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 15903441 - 15903595
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||||| ||| ||||||||||||||||||| | || ||||||||||||||||||||||    
T  15903441 ttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgacttaaggagcacttctcttcagatgcttcaagcttcctttttgttgattcc 15903540  T
Q  145 tttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
     ||||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  15903541 attgctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatg 15903595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 41495214 - 41495343
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| || ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||||||||||||||||||    
T  41495214 gcttctgatgaacttgcttctgatgacatcatcacttcatgagcactttgacttcagaagcacttctcttcagatgctttaagcttcctttttgttgatt 41495313  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| |||||||||||||||||    
T  41495314 cctttgctctcttttgttcttccagaacct 41495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 6090972 - 6091128
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||||||||||| ||||||  |||||| |||||||||  ||||||||||||||||||||||| | || ||||||| ||||||||||||    
T  6090972 gcttttgatgaacttgcttctgatgacgtcataacttcatgagcactttaacttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatt 6091071  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
     | ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  6091072 tcattgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatg 6091128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 191
Target Start/End: Complemental strand, 53056642 - 53056498
Alignment:
Q  48 tgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctt 146  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||||| ||||||||||||||||||    
T  53056642 tgatgaactaacttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctt 53056543  T
Q  147 tgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||| | |||||||||||||  |||||||||||||||||||||||    
T  53056542 tgctttttattgttcttccaagacctttttaagatgtcaaatttt 53056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 20646395 - 20646524
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| ||||||| || ||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  20646395 gcttctgatgaacttgcttctgatgacgtcatcacttcatgaacactttgacttcaggagcacttctcttcaaacgctttaagcttccattttgttgatt 20646494  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| ||||||||| |||||||    
T  20646495 cctttgctctcttttgttcttctagaacct 20646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 14392925 - 14392769
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| |||||| |||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||| | || ||||||||||| ||||||||    
T  14392925 gcttatgatgatcttgcttctgatgacgtcatcacttcaggagcactttaacttcaggagcacttctcttcagatgcttcaagcttcctttctgttgatt 14392826  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  14392825 ccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatg 14392769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 13824272 - 13824429
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcag--acgttttaagcttcctttttgttga 140  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||   |  || ||||||||||||||||||    
T  13824272 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttcaggagcacttcaagcttcctttttgttga 13824371  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||||| |||||||||||||||| |||||||||  |||||||||| |||||    
T  13824372 ttccattgctctcttttgttcttccagaacc-ttttaagataacaaatttttgtctatg 13824429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 13948576 - 13948705
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| |||||||||||||| |||||| ||||||| ||||| |||| ||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  13948576 gcttctgataaacttgcttctgatgacgtcatcacttcatgagcattttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgatt 13948675  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| ||||| |||||||||||    
T  13948676 cctttgctctcttttgtttttccagaacct 13948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 47405356 - 47405221
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctat 156  Q
    ||||||||| ||||||  |||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  47405356 gcttctgatgacgtcattacttcaggagcacttttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctctat 47405257  T
Q  157 tgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||||||||  || |||||||||||| || |||||    
T  47405256 tgttcttccaagacgtttttaagatgttaatttttt 47405221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 17238876 - 17238723
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgtt 138  Q
    |||| |||||| ||| |||||||||||| |||||| |||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||    
T  17238876 ttcatcttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt-gacttcaggagcacttctcttcagacgctttaagcttcctttttgtt 17238778  T
Q  139 gattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||| ||||||| ||||||||  |||||||  | ||||| |||| ||||||    
T  17238777 gattccttagctctcttttgttcttaaagaacctaataaagatatcaagtttttg 17238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 50300492 - 50300606
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||| | || |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  50300492 cttcaggagcgccttatcttcaggagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaaaccttttt 50300591  T
Q  177 aagatgtcaaatttt 191  Q
    |||||||||||||||    
T  50300592 aagatgtcaaatttt 50300606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 37467542 - 37467698
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||| ||| |||||||||||| |||||| |||||||||||| ||||| |||||||||||||| |||||||| | || ||||||||||||||||||||    
T  37467542 gcttctggtgatcttgcttctgatgacgtcatcacttcaggagctctttgacttcaggagcacttatcttcagatgcttcaagcttcctttttgttgatt 37467641  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||| ||||| |||||||| ||||||||  | ||||| ||| ||||||| |||||    
T  37467642 ccattgttctcttttgttctttcagaacctaataaagatatcacatttttgtctatg 37467698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 11869360 - 11869474
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    ||||| |||| || |||||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  11869360 cttcatgagcgctctgtcttcaggagcagttttctttagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagaccttttt 11869459  T
Q  177 aagatgtcaaatttt 191  Q
    |||||||||||||||    
T  11869460 aagatgtcaaatttt 11869474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 22804019 - 22803871
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||| |||||||||| |||| |||||| ||||| ||||||||||   ||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  22804019 gcttctgaggaacttgcttttgatgacgtcatcactttaggagcacttaa-cttcaggagcacttctcttcaaatgtttcaagcttcctttttgttgatt 22803921  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    || ||||||||| ||||||||| |||||||  | ||||| ||||||||||    
T  22803920 ccattgctctcttttgttcttctagaacctaataaagatatcaaattttt 22803871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 40800117 - 40800214
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||    
T  40800117 cttcaggagcacttttcttcagacgctttaagcttcctttttgttgatttctttgctctctattattcttccaagacctttttaagatgtcaaatttt 40800214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 30054200 - 30054096
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  || |||||||||||  |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  30054200 ttgcatctcctgatgaactgaagtttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgtcttcaggagc 30054101  T
Q  104 acttc 108  Q
    |||||    
T  30054100 acttc 30054096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 46796351 - 46796248
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||| ||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  46796351 ttgcatctcctgatgaactgcagcttcttgtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactctgtcttcaggagc 46796252  T
Q  104 actt 107  Q
    ||||    
T  46796251 actt 46796248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 33583536 - 33583657
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||||| || |||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  33583536 cttcaggagcgccttatcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagaccttttt 33583635  T
Q  177 aagatgtcaaatttttgcctat 198  Q
    |||||||||| |||||| ||||    
T  33583636 aagatgtcaattttttgtctat 33583657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 33598156 - 33598277
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||||| || |||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  33598156 cttcaggagcgccttatcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagaccttttt 33598255  T
Q  177 aagatgtcaaatttttgcctat 198  Q
    |||||||||| |||||| ||||    
T  33598256 aagatgtcaattttttgtctat 33598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 40851147 - 40851248
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  |||||||||||||   || ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  40851147 catctcctgatgaactgtagcttctggtgatacacaacttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcact 40851246  T
Q  107 tc 108  Q
    ||    
T  40851247 tc 40851248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 11869253 - 11869352
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||  ||||||||    
T  11869253 ttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatgacatcaccacttcaggagcactttgttgtcaggagc 11869352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 29855700 - 29855815
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||  |||||||    
T  29855700 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacctttt 29855799  T
Q  176 taagatgtcaaatttt 191  Q
    ||||||||| ||||||    
T  29855800 taagatgtcgaatttt 29855815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 49553372 - 49553251
Alignment:
Q  79 tcaggagcactttgtcttcaggagcacttct-cttcagacgttttaagcttcctttttgttgattcctttgctctc-tattgttcttccagaaccttttt 176  Q
    ||||||||||||  ||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||| | ||||||||||||||| | |||    
T  49553372 tcaggagcactta-tcttcaggagcacttctacttcagacgcttcaagcttcctttttgttgattcatttgctctcctgttgttcttccagaacttattt 49553274  T
Q  177 aagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||| |||||    
T  49553273 aagatgtcaaatttttgtctatg 49553251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 20627347 - 20627250
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||| |||| || | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  20627347 cttcagaagcagttttgttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgttaaatttt 20627250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 38177558 - 38177453
Alignment:
Q  93 tcttcaggagcacttctc-ttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||||| |    
T  38177558 tcttcaggagcacttctcattcagatgtttcaagcttcctttttgttgattcatttgctctttttt-ttcttccagaacctttttaagatgtcaaattat 38177460  T
Q  192 tgcctat 198  Q
    || ||||    
T  38177459 tgtctat 38177453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 16199730 - 16199602
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| |||||| || ||||||||||||| | |||||||||||||| |||||||| | || ||||||| || |||||||||    
T  16199730 gcttcttatgaacttgcttctgatgacgtcatcagttcaggagcactt-gacttcaggagcacttttcttcagatgcttcaagcttctttcttgttgatt 16199632  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    || ||||||||  |||||| ||||||||||    
T  16199631 ccattgctctcatttgttcctccagaacct 16199602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 18142703 - 18142619
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagc 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||| ||| |||||||    
T  18142703 agcttctgatgaacttgcttctgatgacgtcaccacttcaggaacactttgtcttcaggagcagttttcttcaaacgctttaagc 18142619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 14955732 - 14955847
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| ||| |||||||| || |||||||||| ||||||||||| |||||||| ||| ||||||||| |||||||||||||  |||||||    
T  14955732 cttcaggagcgctttatctgcaggagcagttttcttcagacgctttaagcttccctttttgttaatttctttgctctttattgttcttccaagacctttt 14955831  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  14955832 taagatatcaaatttt 14955847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 49642647 - 49642569
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  49642647 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 49642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 15833573 - 15833678
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggag 102  Q
    |||||||| ||||||||||  |||||||||||||   ||||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||    
T  15833573 ttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggag 15833672  T
Q  103 cacttc 108  Q
    ||||||    
T  15833673 cacttc 15833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 24775380 - 24775268
Alignment:
Q  83 gagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctct--ctattgttcttccagaacctttttaag 179  Q
    |||| |||| |||||||||||| || |||||| ||| ||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||||||    
T  24775380 gagcgctttatcttcaggagcatttttcttcaaacgctttaagcttccatttttgttgattcctttgctcttacttttgttcttccagtacctttttaag 24775281  T
Q  180 atgtcaaattttt 192  Q
    || ||||||||||    
T  24775280 atatcaaattttt 24775268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 29951357 - 29951229
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||  |||||| |||||||||||||| ||| |||||| ||||||  ||| |||| | || |||||||||||||||||| |    
T  29951357 gcttctgatgaacttgcttctgaagacgtcatcacttcaggagcac-ttgacttcagtagcactattctacagatgcttcaagcttcctttttgttgact 29951259  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
     ||| ||||||| |||||||||||| ||||    
T  29951258 tcttagctctcttttgttcttccaggacct 29951229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 30000511 - 30000383
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||  |||||| |||||||||||||| ||| |||||| ||||||  ||| |||| | || |||||||||||||||||| |    
T  30000511 gcttctgatgaacttgcttctgaagacgtcatcacttcaggagcac-ttgacttcagtagcactattctacagatgcttcaagcttcctttttgttgact 30000413  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
     ||| ||||||| |||||||||||| ||||    
T  30000412 tcttagctctcttttgttcttccaggacct 30000383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 46349764 - 46349598
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca------cttc-----------tcttcagacgttttaag 125  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||      ||||           |||||| | | ||||||    
T  46349764 gcttctgatgaactcgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcattttgccttcatgggtagttttcttcatatgctttaag 46349665  T
Q  126 ctt-cctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||| |||||||||||||||||||||||| |||||||||||||  ||||||||| ||||| |||||||    
T  46349664 cttccctttttgttgattcctttgctctttattgttcttccaagacctttttaggatgttaaatttt 46349598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 49666335 - 49666270
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  49666335 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc 49666270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 5216261 - 5216384
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctatt-gttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||| | ||||||||| |||||||||||||   |||||||| |||| |||||||||  ||||||    
T  5216261 cttcaggagcgctttatcttcaggagcagttttcttcagaagctttaagctttcctttttgttgatgtatttgctctttatttgttcttccaagaccttt 5216360  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  5216361 ttaagatgtcaaatttttgtctat 5216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 16658551 - 16658434
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttccttt-----ttgttgattcctttgctc 151  Q
    ||||||||| |||||| ||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||||||     || || ||||||||||||    
T  16658551 gcttctgatgacgtcatcacttcatgagcatttttgtcttcaggagcacttctcttcagacgctttaagcttcctttattttttttttattcctttgctc 16658452  T
Q  152 tctattgttcttccagaa 169  Q
    | | ||||||||||||||    
T  16658451 tattttgttcttccagaa 16658434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 1727945 - 1727858
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc 130  Q
    |||| ||||||||| ||||||||| |||||| ||||| || |||||||||||||||||||||||| |||||||||  |||||||||||    
T  1727945 gcttttgatgaactagcttctgatgacgtcatcactttagaagcactttgtcttcaggagcacttttcttcagacactttaagcttcc 1727858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 10529513 - 10529616
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggag 102  Q
    |||||||| ||||||| ||  |||||||||||||   ||||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||    
T  10529513 ttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggag 10529612  T
Q  103 cact 106  Q
    ||||    
T  10529613 cact 10529616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 22141017 - 22141132
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| ||||  ||||||||||| || |||||||||  ||||||||||| ||||||||||||||||||||||  ||||||||||||  || ||||    
T  22141017 cttcaggagcgctttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctcttaattgttcttccaagacttttt 22141116  T
Q  176 taagatgtcaaatttt 191  Q
     ||||| |||||||||    
T  22141117 caagatatcaaatttt 22141132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 12726131 - 12726033
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||||||||| ||||||| |||   || ||||||||||||| ||||||| || | ||||| ||||||||||||||||| |||||||||||||||||||    
T  12726131 cttcaggagcaattctctttagatccttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaattttt 12726033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 25398194 - 25398026
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagc-----------ttcc 130  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||| | ||||||||||| |||||||||| | | || ||||           || |    
T  25398194 gcttctgatgaacttgcttctgatgacgtcgtcacttcaggagcacttgtatcttcaggagcgcttctcttcaaatgcttcaagctttctttttgttttc 25398095  T
Q  131 tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||  ||| ||| | ||||||||||||||||||||||||||  |||||||||| |||||    
T  25398094 tttttgttgattcgattgttctattttgttcttccagaacctttttaagattacaaatttttgtctatg 25398026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 9700015 - 9699934
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||| |||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||    
T  9700015 cttctgatgatctgcagcttctggtgaacttgcttctgatgacgtcaacacttcagaagcactttgtcttcagaagcacttc 9699934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 2785370 - 2785486
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaaccttt 174  Q
    ||||| |||| |||| ||||||||| || || |||||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  ||||||    
T  2785370 cttcatgagcgctttatcttcaggaacagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccttt 2785469  T
Q  175 ttaagatgtcaaatttt 191  Q
    |||||||||||||||||    
T  2785470 ttaagatgtcaaatttt 2785486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 50300441 - 50300501
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  50300441 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgtcttcaggagc 50300501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 16032771 - 16032876
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||||| |||||||| | || ||||||| ||||||||||||||  |||||||| |||||||||| ||||||  | |||||  ||||||||||    
T  16032771 cttcaggagcacttttcttcagatgcttcaagcttcatttttgttgattccaatgctctcttttgttcttccggaacctaataaagataccaaatttttg 16032870  T
Q  194 cctatg 199  Q
     |||||    
T  16032871 tctatg 16032876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 21636599 - 21636538
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  21636599 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcacgagca 21636538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 13977939 - 13978007
Alignment:
Q  41 cagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  13977939 cagcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttc 13978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 14955681 - 14955741
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  14955681 gcttctgatgaccttgcttctgatgacgtcattacttcaggagcactttgtcttcaggagc 14955741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 29855649 - 29855709
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||||||    
T  29855649 gcttctgatgaactcgcttctgatgacgtaaccacttcagaagcactttgtcttcaggagc 29855709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 33583485 - 33583545
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  33583485 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 33583545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 33598105 - 33598165
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  33598105 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 33598165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 19249318 - 19249203
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctat 156  Q
    |||||||||| |||||| ||||||||||||| ||   |||||| | ||||| |||||||| | || ||||||| || |||||||||||  |||||||  |    
T  19249318 tgcttctgatgacgtcatcacttcaggagcatttgaacttcagaaccacttttcttcagatgcttcaagcttcattcttgttgattccagtgctctcatt 19249219  T
Q  157 tgttcttccagaacct 172  Q
    ||||||||||||||||    
T  19249218 tgttcttccagaacct 19249203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2785250 - 2785312
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| | |||||||||||| ||||||||| || ||||||||||||||    
T  2785250 ttgcatctcctgatgaactacaacttctggtgattctcagcttctaataaacttgcttctgat 2785312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 21605583 - 21605518
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| |||||| |||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  21605583 gcttatgatgaccttgcttctgatgacgtcatcacttcctgagcactttgtcttcaggagcacttc 21605518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16658593 - 16658541
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  16658593 gtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20646339 - 20646391
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  20646339 gtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 20646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 52920589 - 52920641
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  52920589 gtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatga 52920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 14955615 - 14955674
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||  | |||||||||||| |||||||||||| ||||||||||||||    
T  14955615 catctcctgatgaactgcaacttctggtgattctcagcttctgataaacttgcttctgat 14955674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 2028576 - 2028682
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||||    ||||||| || |||||||||||  |||  ||||||||||||||||||    
T  2028576 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagaccaatttaagatgtcaaatttt 2028675  T
Q  192 tgcctat 198  Q
    || ||||    
T  2028676 tgtctat 2028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 21605514 - 21605406
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcc---tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatt 189  Q
    ||||||||||| || |||||||||| ||||||||| |   |||||||||||   |||||||| |||| |||| ||||  |||||||||||||||||||||    
T  21605514 cttcaggagcagttttcttcagacgctttaagctttcctttttttgttgatgtatttgctctttatttgttcatccaagacctttttaagatgtcaaatt 21605415  T
Q  190 tttgcctat 198  Q
    |||| ||||    
T  21605414 tttgtctat 21605406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 21606325 - 21606431
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||||    ||||||| || ||||| |||||  ||| |||||||||||||||||||    
T  21606325 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttattccaagaccattttaagatgtcaaatttt 21606424  T
Q  192 tgcctat 198  Q
    | |||||    
T  21606425 ttcctat 21606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 9380467 - 9380375
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| |||||||| |||||||||||  ||  ||||||||| |||||| |||||||||||||||||  |||||| |||| || ||||||||    
T  9380467 gcttctgatgattttctgcttctgatgactttctgcttctgatgacgtcatcacttcaggagcactttagcttcagaagcagttttcttcaga 9380375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 15851163 - 15851224
Alignment:
Q  48 tgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  15851163 tgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttc 15851224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 20627405 - 20627356
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||    
T  20627405 ttgcatctcctgatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 21641051 - 21641108
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgctt 61  Q
    |||||||||||||||||||  | ||||||||||||  |||||||||||||||||||||    
T  21641051 ttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 21641113 - 21641170
Alignment:
Q  51 tgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||| | |||| ||||| | ||||||||||||||||||||||||||    
T  21641113 tgaacttgcttctgatgatgtcatcactttatgagcactttgtcttcaggagcacttc 21641170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 47405395 - 47405346
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  47405395 ttgcatctcgtgatgaactgcagcttctggtgattttcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 2785319 - 2785379
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||||||||| |||||| ||||    
T  2785319 gcttctgatgaccttgcttcagatgacgtcatcacttcaggagcactttatcttcatgagc 2785379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6090916 - 6090968
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  6090916 gtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatga 6090968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 12388777 - 12388729
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  12388777 gcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 12388729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13948520 - 13948572
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  13948520 gtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatga 13948572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19888919 - 19888842
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttc 80  Q
    |||||||||||| |||||||||  ||||||| ||||| ||  |||||||||||||||||||||||| | |||| ||||||    
T  19888919 gtcttgcatctcttgatgaactttagcttctagtgatctt--gcttctgatgaacttgcttctgatgatgtcatcacttc 19888842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 37412859 - 37412911
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  37412859 ttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttc 37412911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 40800060 - 40800108
Alignment:
Q  5 tgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||    
T  40800060 tgcatctcttgatgaactgcagcttctggtgattttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49642737 - 49642685
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||| ||||    
T  49642737 gtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctaatga 49642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 11908819 - 11908752
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||  |||||||    
T  11908819 tcttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacctttt 11908752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 18121596 - 18121561
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  18121596 tcttgcatctcctgatgaactagagcttctggtgat 18121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 21636515 - 21636422
Alignment:
Q  109 tcttcagacgttttaagcttcc---tttttgttgattcctttgctctctat-tgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| |||||||||||   |||||||||||   |||||||| ||| |||||||| |  ||||||||||||||||||||||||| ||||    
T  21636515 tcttcagacgctttaagcttccctttttttgttgatgtatttgctctttatatgttcttctaagacctttttaagatgtcaaatttttgtctat 21636422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 49666251 - 49666160
Alignment:
Q  109 tcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| ||||||||||| |||||||||||    ||||||| |||| |||||||||  ||| ||||||||||||||||||||| ||||    
T  49666251 tcttcagacgctttaagcttccctttttgttgatgtaattgctctttatttgttcttccaagaccattttaagatgtcaaatttttgtctat 49666160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 49666389 - 49666327
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  || ||| ||||||| |||||||||||    
T  49666389 ttgcatctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttctgat 49666327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38177618 - 38177566
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||||||||| || |||||||||||||| |||| ||| |||||||||||    
T  38177618 gtcttgcatctcctaataaactagagcttctgatgatcttctgcttctgatga 38177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 512501 - 512540
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctg 64  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  512501 agcttctggtgatcttcagcttatgatgaacttgcttctg 512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 12388743 - 12388685
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctc 153  Q
    |||||||||||||| |||||||| | || |||||||||| ||||||||||| ||||||||    
T  12388743 cttcaggagcactt-tcttcagatgcttcaagcttccttcttgttgattccattgctctc 12388685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 12752455 - 12752388
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| |||||||||||||| |||||||||| |||||||||||  |||||||    
T  12752455 tcttcagatgctttaggcttctctttttgttgattcttttgctctcttttgttcttccaagacctttt 12752388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 14073004 - 14073051
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaac 170  Q
    ||||||||||||||| |||||| ||||||||  |||||||||||||||    
T  14073004 aagcttcctttttgtagattccattgctctcatttgttcttccagaac 14073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 51341189 - 51341252
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||| ||||||||||| || |||| ||||| | |||||||||||||| | ||||||||||    
T  51341189 ttgcatcttctgatgaactacagtttctagtgatatacagcttctgatgaaatagcttctgata 51341252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 18142726 - 18142696
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctg 32  Q
    |||||||||||||||||||||||||||||||    
T  18142726 tcttgcatctcctgatgaactagagcttctg 18142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 33583416 - 33583478
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  33583416 ttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgat 33583478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 33598036 - 33598098
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  33598036 ttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgat 33598098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 5579444 - 5579352
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  5579444 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 5579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 5627828 - 5627736
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  5627828 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 5627736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 5865523 - 5865431
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  5865523 gcttctgatgactttctgcttctgatgacgttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 5865431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 5876105 - 5876013
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  5876105 gcttctgatgactttctgcttctgatgacgttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 5876013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 8728865 - 8728816
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  8728865 aagcttcctttttgtaaattccattgctctcatttgttcttccagaacct 8728816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 8739820 - 8739787
Alignment:
Q  139 gattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||||||||||||| |||||    
T  8739820 gattcctttgctctctattgttcttccaaaacct 8739787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 9080752 - 9080703
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  9080752 aagcttcctttttgtaaattccattgctctcatttgttcttccagaacct 9080703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 9092058 - 9092025
Alignment:
Q  139 gattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||||||||||||| |||||    
T  9092058 gattcctttgctctctattgttcttccaaaacct 9092025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 18484470 - 18484562
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  18484470 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 18484562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24660325 - 24660417
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  24660325 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 24660417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24670905 - 24670997
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  24670905 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 24670997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 24775508 - 24775444
Alignment:
Q  4 ttgcatctcctgatgaactag--agcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||    |||||||||||||| ||||||| |||| |||||| |||||||    
T  24775508 ttgcatctcctgatgaactgcgcagcttctggtgattctcagcttgtgataaacttggttctgat 24775444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 28314042 - 28313950
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  28314042 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 28313950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 28324658 - 28324566
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  28324658 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 28324566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 35187802 - 35187894
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  35187802 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 35187894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 40800098 - 40800131
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcacttt 91  Q
    ||||||||| ||||||||||||||||||||||||    
T  40800098 gcttctgatgacgtcaccacttcaggagcacttt 40800131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 4174566 - 4174491
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  4174566 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 4174491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4744162 - 4744237
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  4744162 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 4744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4754747 - 4754822
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  4754747 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 4754822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 11167897 - 11167980
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaact--tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||| ||| |||| ||||||||||| ||  |||||||||| |||||| |||||||| |||||||   |||||| |||||||    
T  11167897 gcttctgatgactttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaagcactt 11167980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 13148610 - 13148642
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  13148610 ttgttgattcctttgctctcttttgttcttcca 13148642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 13557999 - 13558074
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  13557999 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 13558074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16476703 - 16476778
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  16476703 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 16476778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16493462 - 16493537
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  16493462 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 16493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 20673006 - 20672931
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  20673006 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 20672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 20683591 - 20683516
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  20683591 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 20683516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 21636647 - 21636591
Alignment:
Q  10 ctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||    |||||||||||   ||||||||||||||||||||||||||    
T  21636647 ctcctgatgaactgccacttctggtgatacacagcttctgatgaacttgcttctgat 21636591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 23757723 - 23757798
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  23757723 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 23757798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 37866870 - 37866945
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  37866870 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 37866945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 37886001 - 37886061
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  37886001 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 37886061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 46349818 - 46349774
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttct 48  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||    
T  46349818 ttgcttctcctgatgaactgcaacttctggtgattttcagcttct 46349774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 51988835 - 51988803
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  51988835 ttgttgattcctttgctctcttttgttcttcca 51988803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7888 - 8086
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | || |||||||||| || |||||||||||||||||||    
T  7888 gtcttgcatctcctgatgaaatagagcttctggtgatcttcagcttctgatgaacttgcttttaatgacgtcaccacctcgggagcactttgtcttcagg 7987  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| || |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  7988 agcaattttcttcagacgctttaagctttctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaagttttgtctatg 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 106)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17441782 - 17441585
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |  | ||||||||| |||||| |||||||||||||||||| |||||||    
T  17441782 gtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgattagat-gcttctgatgacgtcatcacttcaggagcactttgacttcagg 17441684  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  17441683 agcacttctcttcagacgctttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatg 17441585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 23185199 - 23185012
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||    
T  23185199 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacatcactacttcaggagcactttgtcttcaagagc 23185100  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |  | |||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  23185099 aaatttcttcagacgctttaagcttcctttttgttagttcatttgctctctattgttcttccaaaatctttttaagatgtcaaatttt 23185012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 18121083 - 18120886
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||  | |||||||||  ||||| ||||||||||||||||||||||||||    
T  18121083 gtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagat-gcttctgatggcgtcatcacttcaggagcactttgtcttcagg 18120985  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| || | ||| ||||||||||| |||||    
T  18120984 agcagttctcttcaaacgctttaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctattgatgatctcaaatttttgtctatg 18120886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 19156374 - 19156544
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagga 101  Q
    ||||||||||| |||||||||| | ||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||    
T  19156374 tcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactttgacttcagga 19156473  T
Q  102 gcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  19156474 gcacttctcttcagacgctttaagcttcctttttgttgatccctttgctctcttttgttcttctagaacct 19156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21933060 - 21933290
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata---------------acgtcaccacttcaggag 85  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||    
T  21933060 gtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgataaacttccttctgatgacgtcaccacttcaggag 21933159  T
Q  86 cactttgt-----------------cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccaga 168  Q
    ||||||||                 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21933160 cactttgtcttcaagagcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaga 21933259  T
Q  169 acctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||||||||||| |||||    
T  21933260 acctttttaagatgtcaaatttttgtctatg 21933290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 20382314 - 20382158
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  20382314 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgatt 20382215  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || || |||||| |||||||| ||||||||  | ||||||||||||||||| |||||    
T  20382214 ccattactctcttttgttctttcagaacctaataaagatgtcaaatttttgtctatg 20382158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 45538412 - 45538224
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||| | |||||||||  ||||||||||||||||  |||| |||| |||| ||||||||| ||||||||||||||||||| |||| |||||||||||    
T  45538412 ttgcatcccatgatgaactgcagcttctggtgatttttggcttatgataaactcgcttctgatgacgtcaccacttcaggagcgctttatcttcaggagc 45538313  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||  ||||||||||| |||||||||||    
T  45538312 agttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagttgtcaaatttt 45538224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 602694 - 602497
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||| ||||||||||||  ||||||| ||||| || ||||| ||||||||||||||||||| |||||| |||||||||||||| | | ||||||     
T  602694 gtcttgcatttcctgatgaactttagcttcttgtgatctttagcttttgatgaacttgcttctgatgacgtcatcacttcaggagcac-tagacttcagc 602596  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | | |||||||| ||||| || || ||||||||||||||||||||| ||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  602595 aacgcttctctttagacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatg 602497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 20255485 - 20255357
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattc 143  Q
    |||||||||||||| ||| |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  20255485 cttctgatgaacttccttatgatgacgtcatcacttcaggagcactttgacttcaggagcagttctcttcagacgctttaaacttcctttttgttgattc 20255386  T
Q  144 ctttgctctctattgttcttccagaacct 172  Q
    ||||||||||| ||||| |||||||||||    
T  20255385 ctttgctctcttttgttgttccagaacct 20255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 17267704 - 17267833
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||||||| |||||||  |||||||||||||| | || ||||||||||||||||||||    
T  17267704 gcttttgatgaacttgcttctaataacgtcatcacttcagaagcactttgacttcaggcacacttctcttcagatgcttcaagcttcctttttgttgatt 17267803  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| |||||||||||||||||    
T  17267804 cctttgctctcttttgttcttccagaacct 17267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 29693548 - 29693671
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt--gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  29693548 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaagagcacttctcttcagatgctttaagcttcctttttgttga 29693647  T
Q  141 ttcctttgctctctattgttcttc 164  Q
    ||||| |||||||| |||||||||    
T  29693648 ttcctctgctctcttttgttcttc 29693671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 16681223 - 16681095
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16681223 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcatttttgttgat 16681124  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    || |||||| ||  |||||||||||||||||    
T  16681123 tcatttgctatc--ttgttcttccagaacct 16681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 16189265 - 16189382
Alignment:
Q  76 acttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||| ||||||| || ||||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||    
T  16189265 acttcaagagcactgtgacttcaagagcacttctcttcagacgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatt 16189364  T
Q  176 taagatgtcaaatttttg 193  Q
    ||||||||||||||||||    
T  16189365 taagatgtcaaatttttg 16189382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 18679992 - 18680140
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||| |||||||| |  ||||||| ||||| ||  |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  18679992 gtcttgcatcttctgatgaaatgaagcttctagtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcagg 18680089  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctct 152  Q
    ||||| |||||||||| | || |||||||||||||||||||||||| |||||    
T  18680090 agcac-tctcttcagatgcttaaagcttcctttttgttgattccttagctct 18680140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 39693768 - 39693924
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||| ||||||| |||||| ||||||||| |||||||| |||||| ||||||||||||| || | |||||||||| ||||||||||||    
T  39693768 gcttttgatgaacttgtttctgatgacgtcatcacttcaggtgcactttgacttcagaagcacttctcttcggatgctttaagcttcttttttgttgatt 39693867  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | |||||||||| | |||||||||||||||  | ||||| ||||||||||| |||||    
T  39693868 catttgctctctttcgttcttccagaacctaataaagatatcaaatttttgtctatg 39693924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 30421322 - 30421212
Alignment:
Q  81 aggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaaga 180  Q
    ||||||| |||||||||||||||| || | |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  30421322 aggagcagtttgtcttcaggagcagttttgttcagacgctttaagcttcctttttgttaattcctttgctctctattgttcttccaagacctttttaaga 30421223  T
Q  181 tgtcaaatttt 191  Q
    |||||||||||    
T  30421222 tgtcaaatttt 30421212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 191
Target Start/End: Original strand, 17797654 - 17797804
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc---tttttgttg 139  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| || | |||||| | |||||||||||   |||||||||    
T  17797654 gcttctgatgaatttgcttctgatgacgtcaccatttcaggagcactttgtcttcaggagcagtt-ttttcagatgctttaagcttccttttttttgttg 17797752  T
Q  140 attcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| | |||| ||||||||  | |||||||||||||||||||||    
T  17797753 attcctttgctatttattattcttccaagatctttttaagatgtcaaatttt 17797804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 17914692 - 17914821
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||||||||||| || ||||||  |||||| |||||||||| ||| ||||||||||||||||||| | || ||||||||||| ||||||||    
T  17914692 gcttctgatgaacttgcttctaatgacgtcattacttcaagagcactttgactttaggagcacttctcttcagatgcttcaagcttcctttctgttgatt 17914791  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| || ||||||||||||||    
T  17914792 cctttgctctcttttattcttccagaacct 17914821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 24646571 - 24646719
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||| |  ||||||||||||||||||  ||| | || ||||||||||||||||||||    
T  24646571 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactata-cttcaggagcacttctctctagatgcttcaagcttcctttttgttgatt 24646669  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    || ||| | ||| ||||||||||| ||||| |||||||||||||||||||    
T  24646670 ccattggtatcttttgttcttccaaaacctatttaagatgtcaaattttt 24646719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 22745754 - 22745858
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  22745754 cttcatgagcacttctcttcagacactttaagcttcctttttgttgattcctttgctcttttttgttcttccagaacctatttaagatgtcaaatttttg 22745853  T
Q  194 cctat 198  Q
     ||||    
T  22745854 tctat 22745858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 19943470 - 19943626
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttg-ttgat 141  Q
    |||||||||||||||||||| |||  ||||| ||||||||||||||| |  ||||||||||||||||||||||| | || ||||||| |||||| |||||    
T  19943470 gcttctgatgaacttgcttccgatgtcgtcatcacttcaggagcactata-cttcaggagcacttctcttcagatgcttcaagcttcttttttggttgat 19943568  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||| || |||||| ||||||||| ||||||| ||||||||||||| |||||| |||||    
T  19943569 tccattactctcttttgttcttctagaacctatttaagatgtcaagtttttgtctatg 19943626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 24833029 - 24832824
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttca----- 98  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||| || |||||||||||||| |||||| ||||||||||||||||||||||||         
T  24833029 ttgcatcctctgatgaactgcagcttctggtgatttttagcttctaataaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaagagc 24832930  T
Q  99 ------------ggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
                |||||| || |||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||  ||||||||||||| |||    
T  24832929 gttttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagatatca 24832830  T
Q  186 aatttt 191  Q
    ||||||    
T  24832829 aatttt 24832824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 6407894 - 6407997
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  || |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  6407894 ttgcatctcctgatgaactgcagcttctggtgattcacaacttctgatgaacttgcttttgatgacgtcatcacttcaggagcactttgtcttcaggagc 6407993  T
Q  104 actt 107  Q
    ||||    
T  6407994 actt 6407997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 14989433 - 14989330
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||||||||| |  ||||||||||||||  |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  14989433 ttgcatctcctgatgaattgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcactttaggagcactttgtcttcaggagc 14989334  T
Q  104 actt 107  Q
    ||||    
T  14989333 actt 14989330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 1237935 - 1238057
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||| ||||| || |||||||| | ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  1237935 cttcaggagcgctttatcttcatgagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 1238034  T
Q  176 taagatgtcaaatttttgcctat 198  Q
    |||||||||||||||||| ||||    
T  1238035 taagatgtcaaatttttgtctat 1238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 13430606 - 13430505
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  13430606 catctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgtcttcaggagcact 13430507  T
Q  107 tc 108  Q
    ||    
T  13430506 tc 13430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 18151638 - 18151535
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||  | ||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  18151638 ttgcatcttctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaagagc 18151539  T
Q  104 actt 107  Q
    ||||    
T  18151538 actt 18151535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 15335926 - 15335811
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| ||||  ||||||||||| || |||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  15335926 cttcaggagcgctttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 15335827  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  15335826 taagatatcaaatttt 15335811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 15424991 - 15424876
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| ||||  ||||||||||| || |||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  15424991 cttcaggagcgctttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 15424892  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  15424891 taagatatcaaatttt 15424876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 15516295 - 15516180
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| ||||  ||||||||||| || |||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  15516295 cttcaggagcgctttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 15516196  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  15516195 taagatatcaaatttt 15516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 9320853 - 9320963
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||| | || |||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  9320853 cttcaggagcgctttatcttcaggagtagttttcttcagacgctttaatcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 9320952  T
Q  176 taagatgtcaa 186  Q
    |||||||||||    
T  9320953 taagatgtcaa 9320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 12757737 - 12757640
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttca 98  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||| || || | |||||||||| |||||    
T  12757737 gtcttgcatctcctgatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatgacgtcatcattttatgagcactttgacttca 12757640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 1745332 - 1745431
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    |||||| |||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||    
T  1745332 catctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcact 1745431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 2811053 - 2811209
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    ||||||||||| |||  ||||||||| |||||| |||||||||||| || |||||||| || |||||||||||||| | ||||||||||| |||||||||    
T  2811053 gcttctgatgagcttcagcttctgatgacgtcatcacttcaggagcgctatgtcttcatgaacacttctcttcagatgctttaagcttcc-ttttgttga 2811151  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||||||||| | || ||| | || ||||| |||||||||| ||||||||| |||||    
T  2811152 tttctttgctcttttttattcattcataacctatttaagatgt-aaatttttgtctatg 2811209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 33083088 - 33083219
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    ||||| |||||||||| |||| || |||||| ||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  33083088 gcttcagatgaacttgtttctaatgacgtcatcacttcaagagcacttttgacttcaagagcacttctcttcagacgctttaagcttcttttttgttgat 33083187  T
Q  142 tcctttgctctctatt-gttcttccagaacct 172  Q
    ||| | |||||| ||| ||||||||| |||||    
T  33083188 tccatagctctcaattcgttcttccaaaacct 33083219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 40845256 - 40845133
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||    
T  40845256 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccttt 40845157  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  40845156 ttaagatgtcaaatttttgtctat 40845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 17525648 - 17525523
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcac-cacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||| ||||||||||||||| | ||||  |||||||||||||||| |||||||||||||||||| |||||| | || || |||| |||||||||||    
T  17525648 gcttctgacgaacttgcttctgatgatgtcaatcacttcaggagcactt-gtcttcaggagcacttcttttcagatgcttcaatcttcatttttgttgat 17525550  T
Q  142 tcctttgctctctattgttcttccaga 168  Q
    | ||||||||||| |||||||| ||||    
T  17525549 ttctttgctctcttttgttctttcaga 17525523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 19707736 - 19707864
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| | |||| ||||||||||||||||   |||||||||||||| ||||||||   || ||||||||||||||||||||    
T  19707736 gcttctaatgaacttgcttctgatgatgtcatcacttcaggagcacttaa-cttcaggagcacttttcttcagattcttcaagcttcctttttgttgatt 19707834  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    || |||| |||  ||||||||||| |||||    
T  19707835 ccattgccctcatttgttcttccataacct 19707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21288579 - 21288676
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||  ||||| |||||||   |||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||    
T  21288579 tcctgatgaactgcagcttgtggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttttcttcaggagcacttc 21288676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 43639990 - 43640071
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||| |||||||  |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  43639990 agcttctgatgatttt--gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgtcttcaggagcacttc 43640071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 36105493 - 36105616
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||||  ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||    
T  36105493 cttcaggagcgctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccttt 36105592  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  36105593 ttaagatgtcaaatttttgtctat 36105616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 23263531 - 23263438
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga--cgttttaagcttcctttt 134  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||  |||||||||||||||||||||||  |  |||||||||||||||    
T  23263531 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcgcttttacttcaggagcacttctcttcagaagcactttaagcttcctttt 23263438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 36105373 - 36105435
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36105373 ttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgat 36105435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21301198 - 21301295
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||| | |||| ||||| |  |||||||||||||||||||||||||    
T  21301198 tcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgatgtcatcactttaaaagcactttgtcttcaggagcacttc 21301295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 16207555 - 16207631
Alignment:
Q  110 cttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 186  Q
    ||||||| | || ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  16207555 cttcagatgcttcaagattcctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaa 16207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15336061 - 15335999
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  15336061 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgat 15335999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15425126 - 15425064
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  15425126 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgat 15425064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 15516430 - 15516368
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  15516430 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgat 15516368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 17701994 - 17702115
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    ||||||||||| |||| |||||| |||||||||||||||| | || |||||||||||||||||||||| |  |||||| ||||| |||||||||||  |     
T  17701994 cttcaggagca-tttgacttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattccataactctcttttgttattccagaacctaata 17702092  T
Q  177 aagatgtcaaatttttgcctatg 199  Q
    |||||  |||||||||| |||||    
T  17702093 aagataccaaatttttgtctatg 17702115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17797600 - 17797662
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  17797600 ttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgat 17797662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 19927335 - 19927429
Alignment:
Q  100 gagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||| || |||| ||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  19927335 gagcagttttctttagacgctttaagcttccctttttgttggttcctttgctctttattgttcttccaagacctttttaagatatcaaatttttg 19927429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 18321058 - 18320953
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||||||| | || ||||||| |||||||||||||| | ||| ||| ||||||||||||||| |  | ||||| |||||||||||    
T  18321058 cttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattccatagctatcttttgttcttccagaacgtaataaagatatcaaatttttg 18320959  T
Q  194 cctatg 199  Q
     |||||    
T  18320958 tctatg 18320953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 1237884 - 1237944
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  1237884 gcttctgatgaacttgtttcagatgacgtcaccacttcaggagcactttgtcttcaggagc 1237944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 18719202 - 18719308
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||| ||| |||||||||||| |||||| |||||||| |   ||||| ||||||||||||| ||||||||| | || |||||||||||||||||||    
T  18719202 agcttctggtgatcttgcttctgatgacgtcatcacttcagaa---ctttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgat 18719297  T
Q  142 tcctttgctct 152  Q
    ||||| |||||    
T  18719298 tccttagctct 18719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22745664 - 22745716
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22745664 gtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 22745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 36105442 - 36105502
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  36105442 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 36105502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 3598319 - 3598257
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||    
T  3598319 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgat 3598257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18321133 - 18321045
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||||||||||||||  ||||||||||||| |||  ||||||||| |  |||||||||| |||||| ||||||||||||||||    
T  18321133 gtcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgatg-agatgcttctgatgacgtcatcacttcaggagcactt 18321045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 3598198 - 3598098
Alignment:
Q  93 tcttcaggagcacttctcttcagacgttttaagcttcctt-tttgttgattcctttgctctctattgttcttcc-agaacctttttaagatgtcaaattt 190  Q
    |||||||||||| || |||||||||| |||||| |||| | |||||||||||||||| ||| |||||||||||| ||| | ||||||| |||||||||||    
T  3598198 tcttcaggagcagttttcttcagacgctttaagtttccctctttgttgattcctttgttctgtattgttcttccaagatcttttttaaaatgtcaaattt 3598099  T
Q  191 t 191  Q
    |    
T  3598098 t 3598098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 9320802 - 9320862
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  9320802 gcttctgatgaactcgcttctgatgacgtcaccactacagaagcactttgtcttcaggagc 9320862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 22674010 - 22674070
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  22674010 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactatttcttcaggagc 22674070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 24551521 - 24551581
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  24551521 gcttatgatgaactcgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 24551581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 22461482 - 22461419
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||| ||||||||    
T  22461482 tcttcagacgtttcaagcttccttcttgttgattccattgctctcttttgttcttacagaacct 22461419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22673956 - 22674018
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||| ||||||||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  22673956 ttgcatctccggatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgat 22674018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 43774100 - 43774166
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||| |||||||||||    
T  43774100 gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtctttaggagcacttc 43774166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 18730894 - 18730766
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| |||||||||||||| |||||| || |||| ||| |||| | |||||  | ||||| |||||| ||| || |||||| |||||||||||||    
T  18730894 gcttctgatcaacttgcttctgatgacgtcatcatttcatgagaactt-gacttcataatcacttttcttcatacgcttcaagctttctttttgttgatt 18730796  T
Q  143 cctttgctctcta-ttgttcttccagaacc 171  Q
    || |||||||  | ||||||||||||||||    
T  18730795 ccattgctcttaatttgttcttccagaacc 18730766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 24646516 - 24646565
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgat 51  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24646516 tcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgat 24646565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 40845360 - 40845299
Alignment:
Q  5 tgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||||| |||||||||||| | | |||||||||| ||||||||||||||    
T  40845360 tgcatctcctgatgaactatagcttctggtgagtcttagcttctgataaacttgcttctgat 40845299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 3598265 - 3598205
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| |||||| |||||||||||  |||||| |||||||||||||||||||||||||||||    
T  3598265 gcttatgatgaccttgcttctgacgacgtcatcacttcaggagcactttgtcttcaggagc 3598205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16207483 - 16207535
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  16207483 gtcttgcatctcctgatgaactagagcttctggtgatctttagcttctaatga 16207535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 18685328 - 18685201
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattc 143  Q
    |||||||| |||||||||||||| |||||| || |||| ||| |||| | |||||  | ||||| |||||| ||| || |||||| ||||||||||||||    
T  18685328 cttctgatcaacttgcttctgatgacgtcatcatttcatgagaactt-gacttcataatcacttttcttcatacgcttcaagctttctttttgttgattc 18685230  T
Q  144 ctttgctctcta-ttgttcttccagaacc 171  Q
    | |||||||  | ||||||||||||||||    
T  18685229 cattgctcttaatttgttcttccagaacc 18685201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 6408016 - 6408107
Alignment:
Q  109 tcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||| ||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||||||||||||||||||||| ||||    
T  6408016 tcttcaaacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttttgtctat 6408107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 19956256 - 19956142
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc-tttgctctct 154  Q
    ||||||||||| |||||| |||||||||||||| |||||||||| |   ||| | |||||||| || ||| |||||| |||||||||||  ||||||||     
T  19956256 ttgcttctgatgacgtcatcacttcaggagcac-ttgtcttcagaacatctttttttcagacgcttcaagtttccttcttgttgattccaattgctctca 19956158  T
Q  155 attgttcttccagaac 170  Q
     |||||||||||||||    
T  19956157 tttgttcttccagaac 19956142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 9320748 - 9320810
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  |||||||||||||||| |||||||||| ||||||||||||||    
T  9320748 ttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgat 9320810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 22663366 - 22663423
Alignment:
Q  46 tctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||| | |||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  22663366 tctgattaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcaagagc 22663423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 22674061 - 22674187
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc----ctttttgttgattcctttgctctcta-ttgttcttccagaacc 171  Q
    |||||||||| ||||  ||||||||||| || |||||||||| ||||||||||     |||||||||||    ||||||| || |||||||||||  |||    
T  22674061 cttcaggagcgctttaacttcaggagcagttttcttcagacgctttaagcttcacttttttttgttgatgtaattgctctttatttgttcttccaagacc 22674160  T
Q  172 tttttaagatgtcaaatttttgcctat 198  Q
    |||||||||||||||||| ||| ||||    
T  22674161 tttttaagatgtcaaattcttgtctat 22674187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39693712 - 39693764
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||||||||||||    
T  39693712 gtcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgatga 39693764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 21541287 - 21541354
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||  |||||||    
T  21541287 tcttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacctttt 21541354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 24551572 - 24551680
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||||| ||  ||||| ||| |||||| ||||||||||||||      |||||| |||| ||||||||  ||||||||    
T  24551572 cttcaggagcgccttatcttcaggagcagtttgcttcaaacgctttaagtttcctttttgttga------tgctctttattattcttccaagaccttttt 24551665  T
Q  177 aagatgtcaaatttt 191  Q
    |||||||||| ||||    
T  24551666 aagatgtcaattttt 24551680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 43774053 - 43774108
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgat 43774108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 18722549 - 18722420
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| ||||||||||| || |||| | || |||| ||| |||| | |||||  | ||||| |||||| ||| || |||||| |||||||||||||    
T  18722549 gcttctgatcaacttgcttctaatgacgtgatcatttcatgagaactt-gacttcataatcacttttcttcatacgcttcaagctttctttttgttgatt 18722451  T
Q  143 cctttgctctcta-ttgttcttccagaacct 172  Q
    || |||||||  | |||||||||||||||||    
T  18722450 ccattgctcttaatttgttcttccagaacct 18722420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21541125 - 21541175
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaa 54  Q
    |||||||||||||||||||| || |||||||||| | ||||||||||||||    
T  21541125 ttgcatctcctgatgaactatagtttctggtgatatacagcttctgatgaa 21541175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22663294 - 22663356
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||| |||||||| | ||||| ||||| |||||||||| || ||||||||||||||    
T  22663294 ttgcatctcctaatgaactacaacttctagtgatcttcagcttctaataaacttgcttctgat 22663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 30421401 - 30421352
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||| ||||||||||  |||||||||||||||| ||||||||||||    
T  30421401 ttgcatcttctgatgaactgcagcttctggtgattttgagcttctgatga 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 23457148 - 23457081
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcacttt 91  Q
    ||||||| ||||||||  |||||||||| |||  |||||||||||||||| |||||||| ||||||||    
T  23457148 gcttctgatgattttctacttctgatgagcttctgcttctgataacgtcatcacttcagaagcacttt 23457081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 6318381 - 6318304
Alignment:
Q  42 agcttctgatgaa---cttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    |||||||||||||   |||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  6318381 agcttctgatgaaaaccttgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 6318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 14989310 - 14989220
Alignment:
Q  109 tcttcagacgttttaagcttcc-tttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| ||||||||||| |||||||||||   |||||||| || |||||||| || |  ||||||||||||||||||||||| ||||    
T  14989310 tcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagatgtcaaatttttgtctat 14989220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 24551452 - 24551511
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttct 63  Q
    ||||||| | |||||||||  ||||||||||||||||  ||||||||| |||||||||||    
T  24551452 ttgcatcccatgatgaactgcagcttctggtgatttttggcttctgataaacttgcttct 24551511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 30421362 - 30421324
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtctt 96  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  30421362 gcttctgatgacgtcactacttcaggagcactttgtctt 30421324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 3348471 - 3348379
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  3348471 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 3348379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 3359068 - 3358976
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  3359068 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 3358976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 6161461 - 6161536
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  6161461 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 6161536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 15780539 - 15780479
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  15780539 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 15780479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 15791143 - 15791068
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  15791143 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 15791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 17518872 - 17518840
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  17518872 ttgttgattcctttgctctcttttgttcttcca 17518840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17525702 - 17525666
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||| || ||||||||||    
T  17525702 gtcttgcatctcctgatgaactacagtttctggtgat 17525666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 19129166 - 19129241
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19129166 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19129241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 19139716 - 19139791
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19139716 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19139791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 26111668 - 26111743
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  26111668 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 26111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 26121346 - 26121421
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  26121346 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 26121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 28903676 - 28903760
Alignment:
Q  26 gcttctggtgattttc-agcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||| |||||||  ||||||||||||| || ||||||||| || ||| ||||||||  || ||| |||||||||||||||||    
T  28903676 gcttctgatgattttatagcttctgatgaattttgcttctgatgacatcatcacttcagaggcccttggtcttcaggagcacttc 28903760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 28903806 - 28903838
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  28903806 ttgttgattcctttgctctcttttgttcttcca 28903838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33083034 - 33083070
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  33083034 gtcttgcatctcctgatgaacttcagcttctggtgat 33083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 33560167 - 33560119
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||| |||||| |||||||  | |||||||||||||||||||||    
T  33560167 gcttctgatgacgtcatcacttcataaacactttgtcttcaggagcact 33560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 40003532 - 40003564
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  40003532 ttgttgattcctttgctctcttttgttcttcca 40003564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 43248753 - 43248828
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  43248753 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 43248828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 84)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 21235299 - 21235486
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  21235299 ttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttctgatgacgtcgctacttcaggagcactttgtcttcaggagc 21235398  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21235399 agttttcttcagacgctttaagcttcctttttgtagattcctttgctctctattgttcttccaagacctttttaagatgtcaaatttt 21235486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 22802327 - 22802514
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  22802327 ttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatgacgtcactacttcaggagcactttgtcttcaggagc 22802426  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | ||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  22802427 agtttatttcagacgttttaagcttcctttttgttgattcctttcctctctattgttcttccaagacctttttaagatgtcaaatttt 22802514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 20730664 - 20730480
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |    
T  20730664 catctcctgatgaactgcagcttctagtgattttcagcttatgatgaacttgcttctgatgacgtcactacttcaggagcactttgtcttcatgagcagt 20730565  T
Q  107 tctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  20730564 tttcttcagacgcttaaagcttcctttttgttgatttctttgctctctattgttcttccaagacctttttaagatgtcaaatttt 20730480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 16265113 - 16264926
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  16265113 ttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcgccacttcaggagcactttgtcttcaggagc 16265014  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||| | |||| | ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  16265013 agttttcttcagatgctttaggattcctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaaatttt 16264926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32544450 - 32544665
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagc-------------- 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||                  
T  32544450 gtcttgcatctcctgatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatgacatcaccacttcaggagcactttgtcttcaag 32544549  T
Q  87 ---actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 183  Q
       |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32544550 agcactttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgt 32544649  T
Q  184 caaatttttgcctatg 199  Q
    |||||||||| |||||    
T  32544650 caaatttttgtctatg 32544665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 34451632 - 34451442
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    |||||||||||||||||||||||||||||||||||||   || ||||| ||||||||||||||||| |||||| |||||||| |||||||| ||||||||    
T  34451632 gtcttgcatctcctgatgaactagagcttctggtgat---caacttctaatgaacttgcttctgatgacgtcatcacttcagaagcacttttgtcttcag 34451536  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||| |||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34451535 gagcgcttctcttcagatgcttcaagcttcctttttgctgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaatttttg 34451442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 15954889 - 15955078
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||| |||||||||| |||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15954889 ttgcatctcttgatgaactacagcttctggtaattctcagcttctgataaacttgcttctgatgacgtcaccacttcaggagcactttgtcttaaggagc 15954988  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    | || | |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  15954989 agtttttttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaattttt 15955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 29918201 - 29918399
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccactt-caggagcactttgtcttcag 99  Q
    ||||||||||||||||||||||| |||||||| |||  ||  |||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||    
T  29918201 gtcttgcatctcctgatgaactacagcttctgatgaactt--gcttctgatggacttgcttctaatgacgtcaccactttcaggagcactttgtcttcag 29918298  T
Q  100 gagcacttctcttcagacgttttaagcttcctt--tttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgccta 197  Q
     |||| || |||||| ||| |||||||||||||  ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| |||    
T  29918299 aagcagttttcttcatacgctttaagcttccttgatttgttgattcctttgctctctattattcttccaagacctttttaagatgtcaaatttttgtcta 29918398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 13435773 - 13435929
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||  ||| ||||||||||||||||||| | || ||||||||||||||||||||    
T  13435773 gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcacttttactttaggagcacttctcttcagatgcttcaagcttcctttttgttgatt 13435872  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||||||||| |||||||| |||||||| |||||||||||||||||||| |||||    
T  13435873 ccattgctctcttttgttctttcagaacctatttaagatgtcaaatttttgtctatg 13435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 19624166 - 19624359
Alignment:
Q  3 cttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggag 102  Q
    ||||||||||||||||||||  ||||||||||||| ||  | |||||||| |  |||||||||| |||||| ||||| |||||||||||| |||||||||    
T  19624166 cttgcatctcctgatgaacttcagcttctggtgatctt--gtttctgatg-agatgcttctgatgacgtcatcactttaggagcactttgacttcaggag 19624262  T
Q  103 cacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| | || |||||||||||||||||||||||| ||||||| |||||||||||||||||  | | ||| ||||||||||| |||||    
T  19624263 cacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctaataatgatatcaaatttttgtctatg 19624359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 24117069 - 24117198
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  24117069 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttgatt 24117168  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||| ||||||| ||||||||||| |||||    
T  24117169 ccttagctctcttttgttcttccataacct 24117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9718028 - 9718213
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg--------------aacttgcttctgataacgtcaccacttcaggagc 86  Q
    ||||||||||||||||||||||||||||||| ||||| || | |||||||||              |||||||||||||| |||||| ||||||| ||||    
T  9718028 gtcttgcatctcctgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgataaacttgcttctgatgacgtcatcacttcaagagc 9718127  T
Q  87 actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9718128 actttgtcttcaggagtagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 9718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 12715383 - 12715219
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||||||| | ||||| ||||| ||  ||||||||||||||| |||||||| |||||| |||||| ||| |||||| ||||||||    
T  12715383 gtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatgaacttccttctgatgacgtcatcacttc-ggaacacttttgtcttcag 12715287  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccag 167  Q
    ||||||||||||||||| | || |||||||||||||||||||| ||||||||||| ||||||||||||    
T  12715286 gagcacttctcttcagatgcttcaagcttcctttttgttgatttctttgctctcttttgttcttccag 12715219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 26972084 - 26971968
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||| ||||||||| |||||| |||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26972084 cttcagtagcactttgacttcagaagcagttctcttcagacgctttaagattcctttttgttgattcctttgctctccattgttcttccagaaccttttt 26971985  T
Q  177 aagatgtcaaatttttg 193  Q
    |||||||||||||||||    
T  26971984 aagatgtcaaatttttg 26971968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19086333 - 19086547
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccactt-----------------cagg 83  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||                 ||||    
T  19086333 gtcttgcatctcctgatgaacttcagcttctggtgatcttcagct-ctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcagg 19086431  T
Q  84 agcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 183  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||||  | | ||| |    
T  19086432 agcactttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctaataatgatat 19086531  T
Q  184 caaatttttgcctatg 199  Q
    |||||||||| |||||    
T  19086532 caaatttttgtctatg 19086547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 15531532 - 15531382
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||| | |||| |||||||||| |||||| |||| ||||||| |||||||||||| | ||||||||| ||||||||||||    
T  15531532 gcttctgatgaacttgcttctgattatgtcatcacttcaggatcacttttgtctacaggagcgcttctcttcagatgctttaagctttctttttgttgat 15531433  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    || |||||||| | ||||| ||||||||| |||||||||||||||||||||    
T  15531432 tcatttgctcttttttgttattccagaacttttttaagatgtcaaattttt 15531382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20112663 - 20112466
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||| |||||||||  |||||| |||||| || ||||||||| ||||||||||||||| |||||| ||||||| || ||||| | ||| |||    
T  20112663 gtcttgcatctcttgatgaacttcagcttcaggtgatctttagcttctgaagaacttgcttctgatgacgtcatcacttcatgaacactt-gactttagg 20112565  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||| ||| | || |||||||||||||||||||||| | || |||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  20112564 agcacttctctttagatgcttcaagcttcctttttgttgattccatagccctctcttgttcttccagaacctaataaagatatcaaatttttgtctatg 20112466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 33351892 - 33351702
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||| |||||| |  || |||||||||||  |||||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||    
T  33351892 ttgcatctcccgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatgacatcatcacttcaagagcactttgtcttcaggagc 33351793  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaattttt 192  Q
    | || |||||||||| ||||||||| |||||||||||||    |||||||||| |||||||||||  |||  |||||||||||||||||||    
T  33351792 agttttcttcagacgctttaagcttccctttttgttgatgtacttgctctctatttgttcttccaagaccactttaagatgtcaaattttt 33351702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 18435850 - 18435971
Alignment:
Q  78 ttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttta 177  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||    
T  18435850 ttcaggagcactttgtcttcaggagcagttctcttcagatgctttaagcttcctttttgttgattccttttctctctattgttcttccaatacattttta 18435949  T
Q  178 agatgtcaaatttttgcctatg 199  Q
    ||||| |||||||||| |||||    
T  18435950 agatgacaaatttttgtctatg 18435971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 21625339 - 21625495
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||| |||||||||||| ||||||  ||||| ||||||||||||||||| |||||||| ||| |||||||||||| | || ||||||||| |||||||||    
T  21625339 gcttatgatgaacttgcctctgatg-cgtcatcacttcaggagcacttttgtcttcagaagcgcttctcttcagatgcttcaagcttcctatttgttgat 21625437  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||| |||||| ||||||||| ||||||||| |||||||||||||||||| |||||    
T  21625438 tcattttctctcttttgttcttcgagaacctttctaagatgtcaaatttttgtctatg 21625495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 15302409 - 15302541
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt--gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttg 139  Q
    ||||| || ||| |||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||  ||||| |||| ||||||||    
T  15302409 agcttttggtgatcttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaggagcacttctcttcagacgccttaagtttccattttgttg 15302508  T
Q  140 attcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||| || |||||| |||||||    
T  15302509 attcctttgctctctttttttcttctagaacct 15302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 19065987 - 19065886
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  19065987 catctcctgatgaactgcagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcact 19065888  T
Q  107 tc 108  Q
    ||    
T  19065887 tc 19065886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 19689008 - 19689113
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||| |||||||||||| || || |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  19689008 cttcaggagcacatctcttcagacgcttcaaacttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 19689107  T
Q  194 cctatg 199  Q
     |||||    
T  19689108 tctatg 19689113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 14100383 - 14100225
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgtt 138  Q
    |||||||||||||||  | ||||||||| |||||| |||||||| |||||| |  ||||||||| |||||||| |||| | || ||||||||||||||||    
T  14100383 ttcagcttctgatgagat-gcttctgatgacgtcatcacttcagaagcactata-cttcaggagtacttctctccagatgcttcaagcttcctttttgtt 14100286  T
Q  139 gattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||| ||||||||| ||||||||||||||||| ||||| || ||||||||||| |||||    
T  14100285 gattccattgctctcttttgttcttccagaacctatttaatatatcaaatttttgtctatg 14100225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 17608286 - 17608182
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  17608286 ttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagc 17608187  T
Q  104 acttc 108  Q
    |||||    
T  17608186 acttc 17608182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 23284805 - 23284930
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| || ||| |||||||| ||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  23284805 gcttctaatgaacttgcttctgatgacatcatcacttcagaagcactt-gacttcaggagcacttctcttcagatgtttcaagcttcctttttgttgatt 23284903  T
Q  143 cctttgctctctattgttcttccagaa 169  Q
    || | | ||||| ||||||||||||||    
T  23284904 ccatagttctcttttgttcttccagaa 23284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 17381705 - 17381821
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||  |||||||    
T  17381705 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctatgctctttattgttcttccaagacctttt 17381804  T
Q  176 taagatgtcaaattttt 192  Q
    |||||||| ||||||||    
T  17381805 taagatgtaaaattttt 17381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 20487775 - 20487661
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    ||||| |||||| || |||||||||||| || |||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||  ||||||||    
T  20487775 cttcaagagcaccttatcttcaggagcagttttcttcagacgctttaagcttcttttttgttgattcctttgctttttattgttcttccaagaccttttt 20487676  T
Q  177 aagatgtcaaatttt 191  Q
    |||||||||| ||||    
T  20487675 aagatgtcaattttt 20487661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 16877399 - 16877604
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttca----- 98  Q
    |||||||||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||| ||||||  ||||||| ||||||  |||||||         
T  16877399 ttgcatctcctgatgaactacaacttttggtgattcacagcttctgatgaacttgcttctgatgacgtcattacttcagaagcactaagtcttcatgagc 16877498  T
Q  99 ------------ggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
                |||||| || |||||||||| ||||||| ||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||    
T  16877499 gctttaacttcaggagcagttttcttcagacgctttaagcctccctttttgttaattcctttgctctttattgttcttccaggacctttttaagatatca 16877598  T
Q  186 aatttt 191  Q
    ||||||    
T  16877599 aatttt 16877604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 21618430 - 21618633
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataa-----cgtc--accacttcaggagcactttgtctt 96  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |     | ||  |  || ||| |||| |||| ||||    
T  21618430 ttgcatcttctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcaagagcgctttatctt 21618529  T
Q  97 caggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgc 194  Q
    |||||||| || |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||||||||||||||| |||||     
T  21618530 caggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaacttttgt 21618629  T
Q  195 ctat 198  Q
    ||||    
T  21618630 ctat 21618633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 19832875 - 19832760
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||||   |||||||| || |||||||||||  |||||||    
T  19832875 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttt 19832776  T
Q  176 taagatgtcaaatttt 191  Q
    ||||||||||||||||    
T  19832775 taagatgtcaaatttt 19832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 13602447 - 13602525
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  13602447 cttcaggagcacttctcttcaaacggtttaagcttcctttttgttgattccttttctctcttttgttcttccagaacct 13602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 139241 - 139136
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||||| || |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |  ||||||||    
T  139241 cttcaggagcgccttatcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagaccttttt 139142  T
Q  177 aagatg 182  Q
    ||||||    
T  139141 aagatg 139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 147262 - 147157
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| | || |||||||||||| || |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |  ||||||||    
T  147262 cttcaggagcgccttatcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagaccttttt 147163  T
Q  177 aagatg 182  Q
    ||||||    
T  147162 aagatg 147157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 18378545 - 18378617
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18378545 cttcaggagcacttctcttaagacgttttaagcttcctttttgttgattcctttactctcttttgttcttcca 18378617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26972192 - 26972125
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataa 68  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26972192 gtcttgcatctcctgatgaaatagagcttctggtgattttctgcttctgatgaacttgcttctaataa 26972125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18435741 - 18435803
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttct 63  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  18435741 gtcttgcatctcctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttct 18435803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 22058439 - 22058338
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  |||||||||||||||||||||||    
T  22058439 cttcaggagcaattctcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 22058340  T
Q  192 tg 193  Q
    ||    
T  22058339 tg 22058338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 17381654 - 17381714
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17381654 gcttttgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagc 17381714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 10640344 - 10640222
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||| | | ||| |||||| | | || |||||||||| |||||||||    
T  10640344 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-ttgacttcagaacctcttttcttcatatgcttcaagcttccttcttgttgatt 10640246  T
Q  143 cctttgctctctattgttcttcca 166  Q
     | ||||||||  |||||||||||    
T  10640245 tcattgctctcatttgttcttcca 10640222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 12423497 - 12423620
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgattcctttgctctctatt-gttcttccagaaccttt 174  Q
    |||||||||| |||   ||||||||||| || |||||||||| |||||||||| ||||||||||||   |||||||| |||| |||||||||  ||||||    
T  12423497 cttcaggagcgcttaaacttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagaccttt 12423596  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  12423597 ttaagatgtcaaatttttgtctat 12423620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 25597754 - 25597832
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||| || |||||| |||||||    
T  25597754 cttcaggagcacttctcttcagatgcttttagcttcctttttgttgattccattgctctcttttattcttctagaacct 25597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 12349254 - 12349355
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  |||||||||||||||||||||||    
T  12349254 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 12349353  T
Q  192 tg 193  Q
    ||    
T  12349354 tg 12349355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 16336429 - 16336551
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||| | |||| |||||||||||| || |||||||||| |||||||||| ||||||||||||   |||||||| || |||||||||||  ||| ||    
T  16336429 cttcaggaacgctttatcttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacc-tt 16336527  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  16336528 ttaagatgtcaaatttttgtctat 16336551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 12423428 - 12423506
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||| |||||||  || ||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  12423428 agcttttggtgatcctcggcttctgataaacttgcttctgatgacgtcatcacttcaagagcactttgtcttcaggagc 12423506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 22076370 - 22076308
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||||||||    
T  22076370 ttgcatctcctgatgaactacatcttctggtgattcacagcttctgatgaacttgcttctgat 22076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 15987488 - 15987585
Alignment:
Q  96 tcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||| |||||||| | || |||||||||||||||||||||||| ||||||| ||||| || ||||||||  | | ||| |||||||||||    
T  15987488 tcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacctaataacgatatcaaatttttg 15987585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 19482994 - 19483059
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||| |||||||||||| || |||||| |||||||| |||||||||||||||||||||||||    
T  19482994 gcttctgacgaacttgcttctaatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 19483059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 26589848 - 26589909
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    |||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||    
T  26589848 gcttctgatgaacttgcttctgatgacgtcattacttcagaagcactttgtcttcaggagca 26589909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 20635947 - 20636013
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  20635947 gcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttc 20636013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 16336384 - 16336436
Alignment:
Q  49 gatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagga 101  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  16336384 gatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 16336436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 18383956 - 18384008
Alignment:
Q  120 tttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  18383956 tttaaacttcttttttgttgattcctttgctctcttttgttcttccagaacct 18384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 19470908 - 19470971
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||    
T  19470908 gcttctgatgaacttgcttctgatgacgtcatcactttaggagcac-ttgacttcaggagcactt 19470971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 13602413 - 13602460
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  13602413 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13602460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 3680738 - 3680835
Alignment:
Q  63 tgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttc 161  Q
    |||| |||||| |||||||| ||||||| | |||||| | ||||| |||||||| | ||||||||||||| |||| |||| ||||||||||| ||||||    
T  3680738 tgatgacgtcatcacttcagcagcactt-gacttcagaaccacttttcttcagatgctttaagcttccttcttgtagatttctttgctctcttttgttc 3680835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 12349200 - 12349250
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  12349200 gcttctgatgatgtcatcacttcaggagcactttgtcttcaggagcacttc 12349250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 22387026 - 22387092
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||| ||||||||| |||||| |||||||   ||||||||||||||||||||||||    
T  22387026 gcttctgatgaactttgcttctgatgacgtcatcacttcaaaggcactttgtcttcaggagcacttc 22387092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 19832995 - 19832938
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgctt 61  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||| | |||||||    
T  19832995 ttgcatctcctgatgaactacatcttctggtgattctcagcttctgataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 26943803 - 26943851
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  26943803 gcttctgacgaacttgcttctgatgacgtcatcacttcaggagcacttt 26943851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 25597720 - 25597767
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  25597720 gcttctgatgaacttgcttcagatgacgtcatcacttcaggagcactt 25597767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 21128396 - 21128458
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||| ||||||||||  ||||||||||||| |  ||||||||||||||| |||||||||    
T  21128396 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttctgat 21128458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22386972 - 22387034
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||| ||||||||||  |||||||||||||   |||||| |||||||||||||||||||    
T  22386972 ttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgat 22387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 16336313 - 16336366
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt 57  Q
    |||||||||||||||| ||| | |||||||||||| |||||||||||| |||||    
T  16336313 ttgcatctcctgatgatctacaacttctggtgattctcagcttctgataaactt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 17316493 - 17316415
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgat-aacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||| |||| | ||||||||| |||||||||||||||| ||| |    ||||||| |||||||||||||||||||||||||    
T  17316493 cttctgatgatctgcagcttctggtgaacttgcttctgatgaactt----acttcagaagcactttgtcttcaggagcacttc 17316415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13602357 - 13602409
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| ||||||| ||||| ||| |||| ||||||    
T  13602357 gtcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgatga 13602409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25597664 - 25597716
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||| ||||||||||||| | ||||||||||| |||||||| ||||||    
T  25597664 gtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatga 25597716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 17608162 - 17608095
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| |||||||||||||| |||||||||| |||||||||||  |||||||    
T  17608162 tcttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttccaagacctttt 17608095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 25592839 - 25592886
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaac 170  Q
    ||||||||||||||| |||||| ||||||||  |||||||||||||||    
T  25592839 aagcttcctttttgtagattccattgctctcatttgttcttccagaac 25592886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 139307 - 139269
Alignment:
Q  28 ttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  139307 ttctggtgatttttagcttctgataaacttgcttctgat 139269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 147328 - 147290
Alignment:
Q  28 ttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  147328 ttctggtgatttttagcttctgataaacttgcttctgat 147290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 19482930 - 19482972
Alignment:
Q  24 gagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||| | |||||||| |||||||||||||||||    
T  19482930 gagcttctggtgatctgcagcttctaatgaacttgcttctgat 19482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 20487880 - 20487818
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  | ||||| |||||||| |||||||||| ||||||||||||||    
T  20487880 ttgcatcctctgatgaactgcaacttctagtgatttttagcttctgataaacttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 31982447 - 31982355
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  31982447 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 31982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9112316 - 9112241
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  9112316 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 9112241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9122953 - 9122878
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  9122953 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 9122878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 12855396 - 12855471
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  12855396 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 12855471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 12865922 - 12865997
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  12865922 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 12865997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 14069962 - 14069903
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||| ||||||||||||| ||||||     ||||| ||||||||| |||||||||||||    
T  14069962 gcttctgatggacttgcttctgatgacgtca-----tcaggtgcactttgttttcaggagcactt 14069903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 18726629 - 18726704
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  18726629 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 18726704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 21128564 - 21128596
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  21128564 ttgttgattcctttgctctcttttgttcttcca 21128596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 26875787 - 26875862
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  26875787 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 26875862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 32961750 - 32961675
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  32961750 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 32961675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 32972369 - 32972294
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  32972369 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 32972294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 33199702 - 33199777
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  33199702 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 33199777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 86)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 5430066 - 5430253
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5430066 ttgcatctcctgatgaactgcagcttctggtgatttttaccttctgatgaacttgcttctgatgacgtcaccacttcagaagcactttgtcttcaggagc 5430165  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  5430166 acttttcttcggacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 5430253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 33022846 - 33023033
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  33022846 ttgcatctcctgatgaactgcaaattctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttcaaaagcactttgtcttcaggagc 33022945  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  33022946 agtttttttcagacgttttaagcttcctttttgttgattcctttgctctcgattgttcttccaagacctttttaagatgtcaagtttt 33023033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 26784536 - 26784699
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcagg 100  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||| ||||||||| |||||||||    
T  26784536 tcttgcatctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatgacttcatgagcacttttgtcttcagg 26784635  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttc 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  26784636 agcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttc 26784699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 31118060 - 31118245
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  |||||||| |||  ||  ||||||  || |||||||| |||| ||||||||||||||||||||||||||||||| |||     
T  31118060 ttgcatctcctgatgaactgcagcttctgatgaactt--gcttctagtggacttgcttatgatgacgtcaccacttcaggagcactttgtcttcatgagt 31118157  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  31118158 agttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 31118245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 14086492 - 14086305
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||  ||||||||||  |||||||||| ||||| ||||| |||| |||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  14086492 ttgcatcctctgatgaactgcagcttctggtaatttttagcttttgataaacttgcttctgatgacatcatcacttcaggagcactttgtcttcaggagc 14086393  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |   |||||||||||| |||||||||    
T  14086392 agttttcttcatacgctttaagcttcctttttgttgattcctttgctctttattgttcttcgaaggcctttttaagatatcaaatttt 14086305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 41566390 - 41566243
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||    
T  41566390 gtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatgacgacatcacttcaggaacactttgtcttcagg 41566291  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttg 148  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  41566290 agcagttctcttcagacgttttaaccttcatttttgttgattcctttg 41566243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 4887204 - 4887392
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||| || |||||||||  |||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||| |||| |||| |    
T  4887204 ttgcatatcttgatgaactgcagcttctggtgattctcagcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactttatctttaggaac 4887303  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||| |||  ||||||||    
T  4887304 agttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaagatctttttatgataccaaatttt 4887392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 17815203 - 17815333
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17815203 gcttctgatgaacttgctactgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagatgttttaagcttcctttttgttgat 17815302  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    |||||| |||||| |||||||||||||||||    
T  17815303 tcctttactctcttttgttcttccagaacct 17815333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21072197 - 21072001
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||||  | ||||||||| || ||| |||||||||||||||   | |||| |    
T  21072197 gtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagat-gcttctgatgacctcatcacttcaggagcactaaat-ttcatg 21072100  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||||| | |||||||| ||||||||  | ||||| ||||||||||| |||||    
T  21072099 agcacttctcttcagacgcttcaagcttcctttttgttgattccttagctcttttttgttctttcagaacctaataaagatatcaaatttttgtctatg 21072001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 30115831 - 30115638
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggag 102  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||| || |||||| ||||||||||||||||    |||||||||    
T  30115831 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtcatcacttcaggagcacttcaaacttcaggag 30115732  T
Q  103 cacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgc 194  Q
    || || |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||| ||||||||||||||||||||||    
T  30115731 cagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccattttaagatgtcaaatttttgc 30115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 89352 - 89197
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattc 143  Q
    |||||| ||| |||||||||||| |||||| |||||||| ||||||||| |||||| |||||||||||||||||  || |||||||||||||||||||||    
T  89352 cttctggtgatcttgcttctgatgacgtcatcacttcagtagcactttgacttcagaagcacttctcttcagacacttcaagcttcctttttgttgattc 89253  T
Q  144 ctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||| ||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  89252 cttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatg 89197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 21910761 - 21910892
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||| ||| |||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21910761 agcttctggtgatcttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttga 21910860  T
Q  141 ttcctttgctctctattgttcttccagaacct 172  Q
    ||| |||||||||| ||||||||| |||||||    
T  21910861 ttcatttgctctcttttgttcttctagaacct 21910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 29138309 - 29138159
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgat 141  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| || || |||||||||| ||||||||||| |||||||||||    
T  29138309 gcttctgatgaacttgcttctgatgacgtcatcactacaggagcactttgtcttcaggaacagttttcttcagacgctttaagcttccatttttgttgat 29138210  T
Q  142 tcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
       |||||||| || |||||||||||  |||||||||||||||||||||||    
T  29138209 gtatttgctctttacttgttcttccaagacctttttaagatgtcaaatttt 29138159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 7745530 - 7745402
Alignment:
Q  76 acttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||||||| || ||| ||||||||||||||||||||| || ||||||||||||||||||| | |||||||||| |||||||| |||||||| ||    
T  7745530 acttcaggagcactatgactttaggagcacttctcttcagacgcttcaagcttcctttttgttgatccatttgctctcttttgttctttcagaacctatt 7745431  T
Q  176 taagatgtcaaatttttgcctatgcttct 204  Q
    |||||||||||||||||| ||||| ||||    
T  7745430 taagatgtcaaatttttgtctatggttct 7745402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 28139809 - 28139965
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgatt 142  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||| |||||||||||| || |||||||| | ||||||||| |||| ||||||||     
T  28139809 cttctgatgaacttggttctgatgacgtcatcacttcaggagcagtttatcttcaggagcagttttcttcagatgctttaagcttcccttgttgttgatg 28139908  T
Q  143 cctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
      |||||||| || |||||||||||  ||||||||||||||||||||||||| ||||    
T  28139909 tatttgctctttatttgttcttccaatacctttttaagatgtcaaatttttgtctat 28139965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 28464300 - 28464200
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28464300 atctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcactt 28464201  T
Q  108 c 108  Q
    |    
T  28464200 c 28464200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 20551149 - 20551255
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttt-tgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  20551149 cttcaggagcacttctcttcagatgcttcaagcttccttttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaattttt 20551248  T
Q  193 gcctatg 199  Q
    | |||||    
T  20551249 gtctatg 20551255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 3245397 - 3245183
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||| || |||||| ||||| || |||||||||||||||| |||    
T  3245397 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtcatcactttagaagcactttgtcttcagaagc 3245298  T
Q  104 acttc------------------tcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgt 183  Q
    |||||                  |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||| |||||||||||    
T  3245297 acttcaaacttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgt 3245198  T
Q  184 caaatttttgcctat 198  Q
    |||||||||||||||    
T  3245197 caaatttttgcctat 3245183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23412930 - 23412751
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||||||||||| ||  |||||||||||||||||||||||| |||||| |||||||||||||                 
T  23412930 gtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca------------- 23412846  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
        |||||||||||| | || |||||||||||||||||||||| ||||||||| ||| |||||||||||||  | ||||| ||||||||||| |||||    
T  23412845 ----cttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgctcttccagaacctaataaagatatcaaatttttgtctatg 23412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 33933577 - 33933688
Alignment:
Q  81 aggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttttaag 179  Q
    |||| |||||| |||||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  33933577 aggaacactttttcttcaggagcagttttcttcagacgatttaagcttctctttttgttgattcctttgctctctattgttcttccaagacctttttaag 33933676  T
Q  180 atgtcaaatttt 191  Q
    || ||| |||||    
T  33933677 atatcatatttt 33933688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 19536202 - 19536093
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||||||| ||| | || |||||| |||||||||||||    
T  19536202 gcttctgatgaacttacttctgatgacgtcatcacttcaggagcactttgtgttcaggagaacttctctttagatgcttcaagctttctttttgttgatt 19536103  T
Q  143 cctttgctct 152  Q
    |||| |||||    
T  19536102 ccttagctct 19536093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 9398695 - 9398559
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||| ||||||||||  | ||||||||||| || ||||||||||||||||| |  |||| |||||| |||||||||||||| ||| |||||| ||||||    
T  9398695 catcttctgatgaacttcaacttctggtgatcttgagcttctgatgaacttgatgttgatgacgtcatcacttcaggagcac-ttgacttcagcagcact 9398597  T
Q  107 tctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||| | | || ||||||||||||||||||||||    
T  9398596 tctcttcaaatgcttcaagcttcctttttgttgattcc 9398559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 10848946 - 10849050
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||| |||||||||  |||||||||||||   |||||| |||||||||||||| |||| | |||| |||||||||||||||||||||||||||||    
T  10848946 ttgcatctcatgatgaactgcagcttctggtgatacacagcttatgatgaacttgcttttgatgatgtcatcacttcaggagcactttgtcttcaggagc 10849045  T
Q  104 acttc 108  Q
    |||||    
T  10849046 acttc 10849050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 15517151 - 15517250
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||| | |||||||||||| ||| |||||||| |||||||||||||| | |||| ||||||||||||||||| |||||||||||    
T  15517151 ttgcatcttctgatgaactacaacttctggtgattctcaacttctgataaacttgcttctgatgatgtcatcacttcaggagcactttatcttcaggagc 15517250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 42243968 - 42244083
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||  || |||||| ||| ||||||||||| |||||||||||| ||||||||| |||||||||||||  |||||||    
T  42243968 cttcaggagcgctttatcttcaggagctgttttcttcatacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaatacctttt 42244067  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  42244068 taagatatcaaatttt 42244083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 642608 - 642499
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||| ||| |||||||| ||||| |||||||||| || ||||||||||||||| ||||    
T  642608 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-ttgacttcaggatcacttttcttcagacgcttcaagcttcctttttgtcgatt 642510  T
Q  143 cctttgctctc 153  Q
    || | ||||||    
T  642509 ccatagctctc 642499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 11994185 - 11994299
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| ||||  ||||||||||| || |||||||| | ||||||||||| ||||||||||||||||||||||  ||||||||||||  |||||||    
T  11994185 cttcaggagcgctttaacttcaggagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctcttaattgttcttccaagacctttt 11994284  T
Q  176 taagatgtcaaattt 190  Q
    |||||| ||||||||    
T  11994285 taagatatcaaattt 11994299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 21099605 - 21099476
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| ||| ||||| |||||||| |||||||||| || |||| |||||||||||||||    
T  21099605 gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcac-ttgacttcatgagcacttttcttcagacgcttcaagcctcctttttgttgatt 21099507  T
Q  143 cctttgctctcta-ttgttcttccagaacct 172  Q
    || | |||||  | ||||||||||| |||||    
T  21099506 ccatggctcttaatttgttcttccaaaacct 21099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 23881303 - 23881452
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||| |||||||||||| | |||| ||||||||||||| |  | ||||| |||||||| |||||||||| || ||||||| || |||||||||    
T  23881303 gcttctgatgaccttgcttctgatgatgtcatcacttcaggagcagta-gacttcaagagcacttttcttcagacgcttcaagcttcattcttgttgatt 23881401  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    || ||||| ||| ||||||||| |||||||  | ||||| |||||||||||    
T  23881402 ccattgctatcttttgttcttctagaacctaataaagatatcaaatttttg 23881452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 26759451 - 26759556
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||||   |||||||| || |||||||||||  |||||||    
T  26759451 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttt 26759550  T
Q  176 taagat 181  Q
    ||||||    
T  26759551 taagat 26759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 30743283 - 30743404
Alignment:
Q  78 ttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    ||||||||| |||| |||||||||| | || |||||||||| ||||||||| |||||||| ||| | ||||||||| |||||||||||||  ||||||||    
T  30743283 ttcaggagcgctttatcttcaggagtagttttcttcagacgctttaagctttcctttttgctgagttctttgctctttattgttcttccaagaccttttt 30743382  T
Q  177 aagatgtcaaatttttgcctat 198  Q
    |||||| ||| |||||| ||||    
T  30743383 aagatgacaattttttgtctat 30743404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 9089199 - 9089305
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  |||||||||||||||||||||||    
T  9089199 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 9089298  T
Q  192 tgcctat 198  Q
    || ||||    
T  9089299 tgtctat 9089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 23391530 - 23391465
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  23391530 gcttatgatgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 23391465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6512387 - 6512306
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcagga 84  Q
    ||||||||||||||||||||||| | ||||| ||||| ||  |||||||||||||||||||||||| |||||| ||||||||||    
T  6512387 gtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcagga 6512306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 11994070 - 11994132
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||    
T  11994070 ttgcatctcctgatgaactacagcttctggtgattcacagcttctgataaacttgcttctgat 11994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 35931959 - 35931865
Alignment:
Q  14 tgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||  | |||||||||||   || ||||||||||||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||    
T  35931959 tgatgaactgtaccttctggtgatacacaacttctgatgaactagcttctgatgacgtcatcacttcagaagcactttgtcttcaggatcacttc 35931865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12352684 - 12352608
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaa 169  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||| | |||||| | ||||||||||||||    
T  12352684 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccatagctctcaatttgttcttccagaa 12352608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 21660438 - 21660505
Alignment:
Q  42 agcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  21660438 agcttctgatgaactttgcttctgatgacgtcatcacttcagatgcactttgtcttcaggagcacttc 21660505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 6512301 - 6512235
Alignment:
Q  106 ttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||  ||||||||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  6512301 ttctcttcagacgccttaagcttcctttttgttgattcatttgctatcttttgttcttcaagaacct 6512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 26759331 - 26759393
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||| || |||||||||||    
T  26759331 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaatttgcttctgat 26759393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 23478536 - 23478596
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctg 64  Q
    |||||||| ||||||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  23478536 ttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctg 23478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 25096709 - 25096661
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25096709 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 25154679 - 25154631
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25154679 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 26759400 - 26759460
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| ||||| |||||| |||||| || ||||||||||||||||||||||||||    
T  26759400 gcttctgatgaccttgcctctgatgacgtcatcagttcaggagcactttgtcttcaggagc 26759460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 42243917 - 42243977
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| ||||| |||||| |||||| ||||||||||||| |||||||||||||||    
T  42243917 gcttctgatgaccttgcatctgatgacgtcatcacttcaggagcattttgtcttcaggagc 42243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20551076 - 20551162
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||||||||||||||  |||||||| |||  |   |||||| |||| |||||||||||| |||||| ||||||||||||||||    
T  20551076 gtcttgcatctcctgatgaacttcagcttctgatgagat---gcttctaatgagcttgcttctgatgacgtcatcacttcaggagcactt 20551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 35986142 - 35986083
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggag 102  Q
    |||||||||||| | ||||||||| |||||| |||||||| |||||||||||||||||||    
T  35986142 gcttctgatgaattagcttctgatgacgtcatcacttcagaagcactttgtcttcaggag 35986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 15517273 - 15517359
Alignment:
Q  109 tcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||| ||  |||||||||||||||||||||||||    
T  15517273 tcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagacctttttaagatgtcaaatttttg 15517359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 23478590 - 23478656
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||| ||||||| |||||||||||||||| ||||||||   |||||||||||||||||||||||    
T  23478590 gcttctgttgaactttgcttctgataacgtcatcacttcagagacactttgtcttcaggagcacttc 23478656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35986192 - 35986134
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||  | ||||||||||||  ||||||||||||||||||||||||||    
T  35986192 atctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgat 35986134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 6499433 - 6499607
Alignment:
Q  16 atgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcag 115  Q
    |||||||  ||||||||||||| ||| |||||||||||  |  ||||| || |||||| ||||||| |||||||| | |||||| | ||||||| |||||    
T  6499433 atgaacttcagcttctggtgatcttctgcttctgatgaggta-cttct-atgacgtcatcacttcatgagcactt-gacttcagaaacacttcttttcag 6499529  T
Q  116 acgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaattttt 192  Q
    | | || |||||||||||||||||||| | | |||||| | |||||||| || |||||  | ||||| ||||||||||    
T  6499530 atgcttcaagcttcctttttgttgatttcatagctctcaatttgttctttcaaaacctaataaagatatcaaattttt 6499607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 33933523 - 33933575
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtctt 96  Q
    ||||||||||||||||||||||| |||| | ||||| ||||||||||||||||    
T  33933523 cttctgatgaacttgcttctgatgacgttatcacttgaggagcactttgtctt 33933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 23478676 - 23478743
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||  |||||||    
T  23478676 tcttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacctttt 23478743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 29138363 - 29138316
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgat 51  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  29138363 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgat 29138316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 32160949 - 32161011
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||| ||||||||||| || |||||||||| | |||||||||||  |||||||||||||    
T  32160949 ttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagacttgcttctgat 32161011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9089141 - 9089190
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  9089141 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 21099654 - 21099609
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||    
T  21099654 atcttctgatgaactttagcttctggtgattttcagcttctgatga 21099609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 25930081 - 25930032
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||| | |||||| |||||||| ||||||||||||||||||||||||    
T  25930081 gcttctggtgacgtcatcacttcagaagcactttgtcttcaggagcactt 25930032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 25930045 - 25929922
Alignment:
Q  77 cttcaggagcactttgt-cttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctcta-ttgttcttccagaacctt 173  Q
    |||||||||||||||   ||||| ||||| || |||||||||| ||||| ||||| |||||||||||   |||||||| || |||||||| ||  || ||    
T  25930045 cttcaggagcacttttaacttcaagagcagttttcttcagacgctttaaccttccatttttgttgatgtatttgctctttacttgttctttcaagac-tt 25929947  T
Q  174 tttaagatgtcaaatttttgcctat 198  Q
    |||||||||||||||||||| ||||    
T  25929946 tttaagatgtcaaatttttgtctat 25929922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 39362244 - 39362169
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| ||||||||  ||||||||||| || ||||||||    
T  39362244 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcactttagcttcaggagcagttttcttcaga 39362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 25111839 - 25111776
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||| ||||||||||  || |||||||||| | |||||||||||||| | ||||||||||    
T  25111839 ttgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaatagcttctgata 25111776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 25170930 - 25170867
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||| ||||||||||  || |||||||||| | |||||||||||||| | ||||||||||    
T  25170930 ttgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaatagcttctgata 25170867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 30743231 - 30743281
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgt 93  Q
    ||||||||||| ||| ||| |||| |||||| |||||||||||||||||||    
T  30743231 gcttctgatgaccttacttttgatgacgtcatcacttcaggagcactttgt 30743281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 33933453 - 33933515
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  | ||| |||||||| |||||||||||| ||||||||||||||    
T  33933453 ttgcatcctctgatgaactgcaacttatggtgattctcagcttctgataaacttgcttctgat 33933515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 42243863 - 42243897
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgatt 38  Q
    |||||||||||||||||||| ||||||||||||||    
T  42243863 ttgcatctcctgatgaactacagcttctggtgatt 42243897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 10849069 - 10849154
Alignment:
Q  109 tcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||| ||||||||| |||||||||||||    ||||||| || |||||||||||  |||  |||||||||||||||||||    
T  10849069 tcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagaccaatttaagatgtcaaattttt 10849154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 21198955 - 21198877
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagca 87  Q
    ||||| ||||||||||  |||| |||||||| ||  |||||||||||  ||||||||||| |||||| | |||||||||||    
T  21198955 catcttctgatgaacttcagctcctggtgatatt--gcttctgatgagtttgcttctgatgacgtcatcgcttcaggagca 21198877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 22676046 - 22675954
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  22676046 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 22675954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 22685937 - 22685845
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  22685937 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 22685845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 24983750 - 24983834
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||| |||  ||| ||||||||||| |||  ||||||||| |||||| ||||||||  |||||||  |||||||||||||||    
T  24983750 gcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttagcttcaggagcacttc 24983834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27042542 - 27042634
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  27042542 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 27042634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27053167 - 27053259
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  27053167 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 27053259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 35226019 - 35225927
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  35226019 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 35225927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 39502451 - 39502543
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  39502451 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 39502543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 1915740 - 1915772
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  1915740 ttgttgattcctttgctctcttttgttcttcca 1915772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 5301480 - 5301540
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  5301480 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5301540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 7032458 - 7032533
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  7032458 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 7032533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 13545476 - 13545448
Alignment:
Q  1 gtcttgcatctcctgatgaactagagctt 29  Q
    |||||||||||||||||||||||||||||    
T  13545476 gtcttgcatctcctgatgaactagagctt 13545448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 17447025 - 17447092
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaact--tgcttctgataacgtcaccacttcaggagcacttt 91  Q
    ||||||| |||  ||| ||||||||||||||  |||||||||| |||||| |||||||| ||||||||    
T  17447025 gcttctgatgaccttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaagcacttt 17447092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21910737 - 21910773
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  21910737 gtcttgcatctcctgatgaactttagcttctggtgat 21910773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 24926469 - 24926536
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||| |||  ||||||||| |||||| ||||||||  |||||||  |||||||||||||||    
T  24926469 gcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttagcttcaggagcacttc 24926536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 27203725 - 27203665
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  27203725 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 27203665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34771842 - 34771767
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  34771842 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 34771767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34782787 - 34782712
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  34782787 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 34782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 40032566 - 40032534
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  40032566 ttgttgattcctttgctctcttttgttcttcca 40032534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 40228999 - 40229031
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  40228999 ttgttgattcctttgctctcttttgttcttcca 40229031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 10073113 - 10073307
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttca 98  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||| |||  ||  ||||||||| || ||||||||||||||||||||||||||||    
T  10073113 gtcttgcatctcctgatgaactactgcttctggtaattttcagcttctggtgattttcagcttctgatgacatcaccacttcaggagcactttgtcttca 10073212  T
Q  99 ggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10073213 ggagcacttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaatttttg 10073307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 19884880 - 19885080
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccac-ttcaggagcactttgtcttcag 99  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||    
T  19884880 gtcttgcatctcctgatgaactacagcttctggtgattgtcagcttctgatgaacttgcttctgatgacgtcgccactttcaagagcactttgtcttcag 19884979  T
Q  100 gagcacttctcttcagacgttttaagcttcctt--tttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgccta 197  Q
    ||||| || |||||||||| |||||||||||||  |||||||||||| |||||||||||| ||||||||  ||| ||||||||||||||||||||| |||    
T  19884980 gagcagttttcttcagacgctttaagcttccttggtttgttgattccattgctctctattattcttccaagaccattttaagatgtcaaatttttgtcta 19885079  T
Q  198 t 198  Q
    |    
T  19885080 t 19885080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 14604784 - 14604628
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14604784 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgatt 14604685  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14604684 ccttagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 14604628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 56034753 - 56034949
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||| ||||||||||  ||||||||||||| ||  |||||||||||||||||||||||| |||||| |||||||| ||||||||  |||||||    
T  56034753 gtcttgcatcttctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgattacgtcatcacttcagaagcacttttacttcagg 56034850  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | ||||| |||||||||| || |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  56034851 atcacttttcttcagacgcttcaagctttctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 56034949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 13576045 - 13575873
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||    
T  13576045 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatg---------------acgtcaccacttcaggagcactttgtcttcaggagc 13575961  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  13575960 agttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaaatttt 13575873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 37435398 - 37435242
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||| |  ||||||||||||||||||||||| | || ||||||||||||||||||||    
T  37435398 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactattacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgatt 37435299  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  37435298 catttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatg 37435242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 29680476 - 29680306
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||||||||  | ||||||||| |||||| |||||||||||||||||| |||||||    
T  29680476 gtcttgcatctcctggtaaactagagcttctggtgatcttcagcttctgatgagat-gcttctgatgacgtcatcacttcaggagcactttgacttcagg 29680378  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    | ||||||||||||||   || |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29680377 aacacttctcttcagatacttcaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 29680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 45833573 - 45833786
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga--------------acttgcttctgataacgtcaccacttcaggagc 86  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||              ||||||||||||| |||||| ||||||| ||||    
T  45833573 gtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgataaacttgcttctgatgacgtcatcacttcaagagc 45833672  T
Q  87 acttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
    ||||| |||||||||||| ||||| |||||| | || ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  45833673 acttttgtcttcaggagcgcttcttttcagatgcttcaagcttcctttttgttgattcgtttgctctcttttgttcttccaaaacctttttaagatgtca 45833772  T
Q  186 aatttttgcctatg 199  Q
    |||||||| |||||    
T  45833773 aatttttgtctatg 45833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 54680147 - 54680280
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctatt 157  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  54680147 gcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcaattttcttcagacgctttaagcttcctttttgttgattcctttgctctttatt 54680246  T
Q  158 gttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||  |||||||||||||| ||||||||    
T  54680247 gttcttccaagacctttttaagatgacaaatttt 54680280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 191
Target Start/End: Original strand, 29121608 - 29121757
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgat 141  Q
    |||||||||||||||||| ||||| ||| || ||||||| |||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||    
T  29121608 gcttctgatgaacttgctactgatgacgccatcacttcaagagcactttgtcttcaggtgcagttttcttcagacgttttaagcttccctttttgttgat 29121707  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  29121708 tcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 29121757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 19620972 - 19620813
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgtt 138  Q
    |||||||||||||||  | ||||||||| |||||| |||||||||| ||||||| |||||||||||| |||||||||| | |||||||||||||||||||    
T  19620972 ttcagcttctgatgagat-gcttctgatgacgtcatcacttcaggatcactttgacttcaggagcacgtctcttcagatgctttaagcttcctttttgtt 19620874  T
Q  139 gattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||| |||||||||||||||||  | ||||| ||||||||||| |||||    
T  19620873 gattcctttgctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatg 19620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 9141096 - 9141226
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||| |||||||| |||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9141096 gcttctgaagaacttgcatctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttcctttttgttgat 9141195  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||| ||||||||||| |||||    
T  9141196 tcctttgctctcttttgttcttccataacct 9141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 22675414 - 22675279
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta 155  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||| | || |||||||||| |||||| |||  ||||||||||||||||||||||||    
T  22675414 ttgcttctgatgacgtcactacttcaggagcactttgtctttaggagaagttttcttcagacgctttaagattcaattttgttgattcctttgctctcta 22675315  T
Q  156 ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||  |||| ||||||||||||||||||    
T  22675314 ttgttcttccaagacctctttaagatgtcaaatttt 22675279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 10693031 - 10693237
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcag---- 99  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||        
T  10693031 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagcagc 10693130  T
Q  100 -------------gagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttcc-agaacctttttaagatgtc 184  Q
                 ||||  || |||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||    
T  10693131 gctatatcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtc 10693230  T
Q  185 aaatttt 191  Q
    |||||||    
T  10693231 aaatttt 10693237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 10906797 - 10907003
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcag---- 99  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||        
T  10906797 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagcagc 10906896  T
Q  100 -------------gagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttcc-agaacctttttaagatgtc 184  Q
                 ||||  || |||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||    
T  10906897 gctatatcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtc 10906996  T
Q  185 aaatttt 191  Q
    |||||||    
T  10906997 aaatttt 10907003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 14571204 - 14571308
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  | ||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  14571204 ttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 14571303  T
Q  104 acttc 108  Q
    |||||    
T  14571304 acttc 14571308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 3105331 - 3105172
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttg 139  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| || |||||||||  ||||||||| |||||||||||    
T  3105331 cagcttctgatgaacttgcttttgatgacgtcatcacttcaggagcaccttgtcttcaggagcagttttcttcagacactttaagcttccctttttgttg 3105232  T
Q  140 attcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    ||    ||||||| || ||||||||||| ||||  |||||||||||||||||||| ||||    
T  3105231 atgtacttgctctttatttgttcttccaaaaccaatttaagatgtcaaatttttgtctat 3105172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 3395894 - 3395989
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3395894 cttcatgagcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 3395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 3793303 - 3793473
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||                 ||||||    
T  3793303 ttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatgacgtcaccacttc-----------------aggagc 3793385  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  3793386 agttttcttcagacactttaagctttctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 3793473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 16632673 - 16632823
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||| |||||| ||||||||||||   |||| |||||||| ||||||||| ||| ||||||||||||||||||| | || ||||||||||||||||||||    
T  16632673 gcttttgatgaccttgcttctgatggtgtcatcacttcagaagcactttgactttaggagcacttctcttcagatgcttcaagcttcctttttgttgatt 16632772  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    || ||||||||| ||||| |||||||||||  | ||||| |||||||||||    
T  16632773 ccattgctctcttttgtttttccagaacctaataaagatatcaaatttttg 16632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 3497931 - 3498016
Alignment:
Q  106 ttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3497931 ttctcttcagacgctttaagcttcctttttgttgattcctttgctctatattgttcttccaaaacctttttaagatgtcaaatttt 3498016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 16940184 - 16940352
Alignment:
Q  31 tggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc 130  Q
    |||||||| |||||||||||| |||||||||||||| |||||| ||||||| |||||||||  ||||||||||| || |||||||||| |||||||||||    
T  16940184 tggtgattctcagcttctgataaacttgcttctgattacgtcatcacttcaagagcactttaacttcaggagcagttttcttcagacgctttaagcttcc 16940283  T
Q  131 ttttt-----gttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||     ||||||   |||||||| |||| |||||||||  |||||||||||||||||||| ||||    
T  16940284 ttttttttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatatttg 16940352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 413186 - 413281
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||    
T  413186 atctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcactacttcatgaacactttgtcttcaggagc 413281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 12601334 - 12601464
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||| |||||  ||||| |||| || ||| ||||||||||||||||| ||||| |||| |||||||||||||| |  |||||||||||||||||||||    
T  12601334 gcttcttatgaaaatgcttttgatgacatcatcacttcaggagcacttttgtcttaaggaacacttctcttcagatgccttaagcttcctttttgttgat 12601433  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||| |||||||||||||||||    
T  12601434 tcctttgctctcttttgttcttccagaacct 12601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 55732063 - 55732177
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||  ||||||||    
T  55732063 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttcccttttgttgatttctttgctctttattgttcttccaagaccttttt 55732162  T
Q  177 aagatgtcaaatttt 191  Q
    ||||| |||||||||    
T  55732163 aagatatcaaatttt 55732177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 198
Target Start/End: Original strand, 6517665 - 6517879
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||| | |||||||||||    
T  6517665 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactatatcttcaggagc 6517764  T
Q  104 acttc------------------tcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgt 183  Q
     |||                   |||||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  |||||||||||||||    
T  6517765 gctttatcttcaggagcagtttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgt 6517864  T
Q  184 caaatttttgcctat 198  Q
    |||||||||| ||||    
T  6517865 caaatttttgtctat 6517879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 14833575 - 14833751
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg---------aacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||||||| || | ||||||| ||| ||||||||||||||         ||| |||||||||| || | | |||||||||||||||||    
T  14833575 gtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatgcttcttatgaacctgcttctgatgactttatcacttcaggagcacttt 14833674  T
Q  92 -gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccag 167  Q
     ||||||||||||||||| ||||||| | || ||| || ||||||||||||| ||||||||||| ||||||||||||    
T  14833675 tgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 14833751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 6641916 - 6642044
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| ||| |||||| ||||| | |||||||| | || |||||||||| ||||||| |    
T  6641916 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac-ttgacttcagaagcacatttcttcagatgcttcaagcttccttcttgttgact 6642014  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    || ||||||||  |||||||||||||||||    
T  6642015 ccattgctctcatttgttcttccagaacct 6642044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 12811020 - 12810915
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||| |||||||||  ||||| | |  |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12811020 cttcagaagcacttctgctcagatgctacaagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 12810921  T
Q  194 cctatg 199  Q
     |||||    
T  12810920 tctatg 12810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 14904216 - 14904040
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctctt----------------cagacgtttt 122  Q
    |||||||||||||||||||||||||||  |||||| |||||||  |||||||||||||||||||||||||||||                |||||| |||    
T  14904216 ttcagcttctgatgaacttgcttctgaagacgtcatcacttcaatagcactttgtcttcaggagcacttctcttcagaaggagttctcttcagacgcttt 14904117  T
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||| |||||||| |||| |||||||||| |||||||||||||||||  | | ||| ||||||||||| |||||    
T  14904116 aagcttcttttttgtttattcatttgctctcttttgttcttccagaacctaatgatgatctcaaatttttgtctatg 14904040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 22191028 - 22191122
Alignment:
Q  14 tgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||    
T  22191028 tgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgtctttaggagcacttc 22191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 16853765 - 16853862
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |  ||||||||||||| |||||||||    
T  16853765 cttcaggagcagatttcttcagacgctttaagcttcctttttgttgattcctttgctcttaattgttcttcaaagacctttttaagatatcaaatttt 16853862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 39419668 - 39419571
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||  |||||||||||||   || ||||||||||||| ||||||||| |||||| |||||||| ||||||||||||| |||||||||||    
T  39419668 tcctgatgaactgcagcttctggtgatacacaacttctgatgaactagcttctgatgacgtcatcacttcagaagcactttgtctttaggagcacttc 39419571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 55380528 - 55380605
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacc 171  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||| || |||||||    
T  55380528 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 8105939 - 8106023
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgtt 160  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  8105939 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgtt 8106023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 17247528 - 17247644
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||| |||| ||||||||||||||||| || |||  ||||  ||||||||| |||||||||||||||||||||||| | |||||||||||  |||||||    
T  17247528 cttcaagagcgctttgtcttcaggagcagttttctggagacactttaagctttcctttttgttgattcctttgctctttgttgttcttccaagacctttt 17247627  T
Q  176 taagatgtcaaattttt 192  Q
    || ||||||||| ||||    
T  17247628 taggatgtcaaaatttt 17247644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 20977632 - 20977712
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||| |||| | ||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  20977632 cttctgatgatctgcagcttctggtgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcactt 20977712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 17247426 - 17247485
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  17247426 catctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgat 17247485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 25650984 - 25650861
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| | |||||||||| || |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  |||||     
T  25650984 cttcaggagcgctttattttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccttc 25650885  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  25650884 ttaagatgtcaaatttttgtctat 25650861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 9751477 - 9751375
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcac 105  Q
    |||||| |||||||||  |||||||||||||    |||||||||||||||| ||||||||| |||||| |||||||  ||||||||||||||||||||||    
T  9751477 catctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttgcttctgatgacgtcatcacttcataagcactttgtcttcaggagcac 9751378  T
Q  106 ttc 108  Q
    |||    
T  9751377 ttc 9751375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 15475076 - 15474978
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||  |||||||||||||   |||||| |||||||||| ||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  15475076 tcctgatgaactgtagcttctggtgatacacagcttttgatgaactttgcttctgatgacgtcatcacttcataagcactttgtcttcaggagcacttc 15474978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 17398615 - 17398529
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||||||||||   ||||||||||||||   ||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  17398615 ttgcatctcctgatgaaccgcagcttctggtgattcatagcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactt 17398529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 27188574 - 27188493
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||| |||| | ||||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||    
T  27188574 cttctgatgatctgcagcttctggtgaacttgcttctgatgacgtcaacacttcagaagcactttgtcttcagaagcacttc 27188493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 8105889 - 8105948
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  8105889 cttctgatgaacttgcttctgatgacatcatcacttcaggagcactttgtcttcaggagc 8105948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3395769 - 3395834
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||||||||| ||||||| ||||| |||| |||||||| ||||||||||||||    
T  3395769 gtcttgcatctcctgatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgat 3395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 3499540 - 3499475
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||| |||||||    
T  3499540 gcttctgatgaacttgcttctgatgacatcatcacttcagaagcactttgtcttcaggtgcacttc 3499475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 17700688 - 17700623
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||| |||||||||||||| |||||| ||||| || |||||||||||||||||||||||||    
T  17700688 gcttctgataaacttgcttctgatgacgtcatcactttagaagcactttgtcttcaggagcacttc 17700623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 40860892 - 40860957
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| ||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  40860892 gcttatgatgaactagcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 40860957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3483900 - 3483963
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctg 64  Q
    |||||||||||| | |||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  3483900 gtcttgcatctcttaatgaactataacttctggtgatcttcagcttctgatgaacttgcttctg 3483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 38514053 - 38514155
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttg-cttctgataacgtcaccacttcaggagcactttgtcttcaggagcac 105  Q
    |||||| |||||||||  ||||||| |||||    ||||||||||||||| | |||||||| || ||| |||||||| ||||||||||||||||||||||    
T  38514053 catctcttgatgaactgcagcttctagtgatacatagcttctgatgaactaggcttctgatgacatcatcacttcagaagcactttgtcttcaggagcac 38514152  T
Q  106 ttc 108  Q
    |||    
T  38514153 ttc 38514155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 54680108 - 54680157
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  54680108 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 413332 - 413391
Alignment:
Q  131 tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  413332 tttttgttgattcctttgctctttattgttcttccaagacctttttaa-atgtcaaatttt 413391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 25651047 - 25650975
Alignment:
Q  31 tggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| | |||||||||||||||||||| |||| | |||| |||||||||| |||||| |||||||||||    
T  25651047 tggtgattcttagcttctgatgaacttgcttatgatgatgtcatcacttcaggaacactttatcttcaggagc 25650975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 3486351 - 3486398
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3486351 tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagca 3486398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 40846368 - 40846467
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||||||| |||||||| | || |||||||||||||||||||||| |  ||||| | |||||||| ||||||||  | ||||| ||||||||||    
T  40846368 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccataactctcaatttgttctttcagaacctaataaagatatcaaattttt 40846467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 55380490 - 55380541
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  55380490 ttcagcttctgatgatcttgcttctgatgacgtcatcacttcaggagcactt 55380541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 17540700 - 17540782
Alignment:
Q  90 ttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||| | | ||| |||||||| | || |||||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  17540700 ttgtcttcagaacctcttttcttcagatgcttcaagcttccttcttgttgattccattgctctcatttgttcttccagaacct 17540782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 17247477 - 17247525
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||    
T  17247477 gcttctgatgaactcgcttctgatgacatcaccacttcaggagcacttt 17247525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19911812 - 19911760
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | |||||| |||| |||||||||||||||    
T  19911812 gtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23123610 - 23123662
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  23123610 gtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatga 23123662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 40846334 - 40846382
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  40846334 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcacttt 40846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 14153824 - 14153699
Alignment:
Q  77 cttcaggagcacttt-gtcttcaggagcacttc-tcttcaga--cgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||  || ||||||||||| ||| |||| |||||| ||||||| |||| |   ||||||||    
T  14153824 cttcaggagcgcttttgtcttcaggagcagttcttcttcagaagcgctttaagcttcc-tttcgttgtttccttagctctcttttgtccaatcagaacct 14153726  T
Q  173 ttttaagatgtcaaatttttgcctatg 199  Q
     |||||||||| ||||||||| |||||    
T  14153725 ctttaagatgttaaatttttgtctatg 14153699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 14153912 - 14153874
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttct 63  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14153912 agcttctggtgatcttcagcttctgatgaacttgcttct 14153874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 15139463 - 15139592
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||| ||  || ||| ||||||  |||||||| | ||| |||||||||| ||||||   | || ||||||||||||||||||||    
T  15139463 gcttctaatgaacttgcttccgaagacatcatcacttctagagcactt-gacttaaggagcacttttcttcaattgcttaaagcttcctttttgttgatt 15139561  T
Q  143 cctttgctctcta-ttgttcttccagaacct 172  Q
    || | |||||  | |||||||||||||||||    
T  15139562 ccatagctcttaatttgttcttccagaacct 15139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12811110 - 12811070
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttc 41  Q
    |||||||||||||| |||||||||||||||||||||| |||    
T  12811110 gtcttgcatctcctaatgaactagagcttctggtgatcttc 12811070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14904288 - 14904236
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| ||||| || ||||||    
T  14904288 gtcttgcatctcctgatgaactacaacttctggtgatcttcagattttgatga 14904236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 33378757 - 33378793
Alignment:
Q  130 ctttttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33378757 ctttttgttgattcctttgctctcttttgttcttcca 33378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 1672641 - 1672702
Alignment:
Q  46 tctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||||||||||||||||| ||||||  ||| ||| ||||||  | ||||||||||||||    
T  1672641 tctgatgaacttgcttctgatgacgtcataactacagaagcactaagacttcaggagcactt 1672702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 1675116 - 1675177
Alignment:
Q  46 tctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||||||||||||||||| ||||||  ||| ||| ||||||  | ||||||||||||||    
T  1675116 tctgatgaacttgcttctgatgacgtcataactacagaagcactaagacttcaggagcactt 1675177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 10750984 - 10750892
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  10750984 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 10750892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 10964753 - 10964661
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  10964753 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 10964661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 11901530 - 11901579
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||| ||||| ||| ||||  |||||||||||||||||    
T  11901530 aagcttcctttttgttaattccattgttctcatttgttcttccagaacct 11901579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 16853663 - 16853732
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtca 73  Q
    ||||||||  |||| ||||| | ||| ||||||||  ||||||||||| |||||||||||||| ||||||    
T  16853663 ttgcatcttttgatcaactacaacttatggtgattcacagcttctgataaacttgcttctgatgacgtca 16853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 17276417 - 17276509
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  17276417 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 17276509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 19944143 - 19944051
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| |||  ||| ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19944143 gcttctgatgaccttctgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19944051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 23750757 - 23750829
Alignment:
Q  120 tttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||| ||||||||||| ||||| | ||||||||| |||||||  | || || |||||||||||    
T  23750757 tttaagcttcctttt-gttgattccttagctcttttttgttcttctagaacctaataaatatatcaaatttttg 23750829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 25089150 - 25089242
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  25089150 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 25089242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 36029333 - 36029425
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  36029333 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 36029425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 49518579 - 49518671
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  49518579 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 49518671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4948779 - 4948854
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  4948779 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 4948854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16256313 - 16256388
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  16256313 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 16256388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 16266906 - 16266981
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  16266906 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 16266981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 19954778 - 19954703
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19954778 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19954703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 20648450 - 20648375
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  20648450 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcaga 20648375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23750699 - 23750751
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  |||||||||| || || | ||||||||||    
T  23750699 gtcttgcatctcctgatgaacttcagcttctggttatctttaacttctgatga 23750751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37435467 - 37435431
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  37435467 gtcttgcatctcctgatgaacttcagcttctggtgat 37435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 52704232 - 52704307
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  52704232 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 52704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32785834 - 32785636
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||| |||||||||| | ||||| |||||||||||||||| |||||||||||||| || |||| ||||||||||| |||||||| |||||||    
T  32785834 gtcttgcatctcatgatgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatgacgttaccacttcaggggcactttgccttcagg 32785735  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| || |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  32785734 agcagttttcttcagacgctttaagcttcctttttgttgattcatttgctttctattgttcttccagaacctttttaagatgtcaaatttttgtctatg 32785636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 16235168 - 16234995
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaag 125  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||| |||||| | || |||    
T  16235168 cttctggtgatcttcagcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttgtgtcttcaggagcacttcttttcagatgcttcaag 16235069  T
Q  126 cttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||    
T  16235068 cttcctttttgttgattccattgctctcttttgttcttccagaacctttttaatatgacaaatttttgtctatg 16234995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22600078 - 22599865
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga--------------acttgcttctgataacgtcaccacttcaggagc 86  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||              ||||||||||||| | |||| ||||||||||||    
T  22600078 gtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgataaacttgcttctgatgatgtcatcacttcaggagc 22599979  T
Q  87 acttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
    ||||| |||||||||||| |||||||||||| | || ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  22599978 acttttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccaaaacctttttaagatgtca 22599879  T
Q  186 aatttttgcctatg 199  Q
    |||||||| |||||    
T  22599878 aatttttgtctatg 22599865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 36134395 - 36134570
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgtttta 123  Q
    ||||||||||||| ||||||||||| || |  |||||||||| || |||   ||||||||||||||| |||||||||||| |||||||||||| | || |    
T  36134395 agcttctggtgatcttcagcttctggtggagatgcttctgatgacatcattgcttcaggagcacttttgtcttcaggagcgcttctcttcagatgcttca 36134494  T
Q  124 agcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  36134495 agcttcctttttgttgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 36134570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 22427252 - 22427048
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata---------------acgtcaccacttcaggagcac 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||               || ||||||||||||||||||    
T  22427252 ttgcatctcctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttctggtagacttgcttctgatgacatcaccacttcaggagcac 22427153  T
Q  89 tttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaat 188  Q
    || |||||| |||||| || |||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22427152 ttggtcttcgggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaaat 22427053  T
Q  189 ttttg 193  Q
    |||||    
T  22427052 ttttg 22427048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 2268767 - 2268923
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||| | |  || ||||||||||| ||||    
T  2268767 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagatgctacaaacttcctttttgatgat 2268866  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2268867 tcatttgctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctat 2268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 1900607 - 1900729
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |     
T  1900607 cttcaggagcactttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaatg 1900706  T
Q  177 aagatgtcaaatttttgcctatg 199  Q
    | ||| ||||||||||| |||||    
T  1900707 atgatctcaaatttttgtctatg 1900729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 191
Target Start/End: Original strand, 2267295 - 2267444
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| |||| || |||||| | | ||||||||||||||||||||||    
T  2267295 agcttctgatgaacttgcttctaatgacgtcactacttcaggagcactatgtcttcagaagcagttttcttcatatgctttaagcttcctttttgttgat 2267394  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | |||| ||||||||||||||||||  |||||||||| ||||||||||||    
T  2267395 ttctttactctctattgttcttccaagacctttttaaaatgtcaaatttt 2267444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 2834875 - 2835079
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2834875 ttgcatctcccgatgaactgcagcttctggtgattttcagcttctaatga-cttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagc 2834973  T
Q  104 acttc-----------------tcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtca 185  Q
     |||                  |||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  2834974 gctttgtcttcaggagcaattttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtca 2835073  T
Q  186 aatttt 191  Q
    ||||||    
T  2835074 aatttt 2835079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 22154147 - 22154270
Alignment:
Q  76 acttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||||||| || ||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||    
T  22154147 acttcaggagcactgtgacttcaggagcacttctcttcagacgcttcaagcttcatttttgttgattcatttgctctcttttgttcttccagaacctatt 22154246  T
Q  176 taagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||||| |||||    
T  22154247 taagatgtcaaatttttgtctatg 22154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 12284651 - 12284782
Alignment:
Q  13 ctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctctt 112  Q
    ||||||||||  ||||||||||||| ||  |||||||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||||||||||||    
T  12284651 ctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgacttcaggagcacttctctt 12284748  T
Q  113 cagacgttttaagcttcctttttgttgattcctt 146  Q
    |||| |||| ||||||||||||||||||||||||    
T  12284749 cagatgtttcaagcttcctttttgttgattcctt 12284782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 39200887 - 39200716
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| |||||||  ||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||         
T  39200887 ttgcatctcctaatgaactgcagcttttggtgattttcagcttttgatgaacttgcttttgatgacgtcaccacttcaggagcactttgtcttcat---- 39200792  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
                ||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  39200791 ------------acgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 39200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 7310002 - 7310185
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||| ||  ||||| ||||||| |||||||||||||||  | | ||||||| |||||| |||||||| |||||||| ||||||||    
T  7310002 gtcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgatgagat-gtttctgatgacgtcatcacttcagaagcacttttgtcttcag 7310100  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaa 187  Q
    ||||||||||||||||| | | ||||||||||    |||||||| || ||||||| ||||||||||||||||| ||||||||||||||    
T  7310101 gagcacttctcttcagatgctataagcttccta---gttgattctttagctctcttttgttcttccagaacctatttaagatgtcaaa 7310185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 33256193 - 33256036
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||||| |||  ||||||||| |||||||||||    
T  33256193 gcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgat 33256094  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||  |||||||| | |||||  | | ||| ||||||||||| |||||    
T  33256093 tcctttgctctcttctgttcttctataacctaataatgatttcaaatttttgtctatg 33256036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 33276365 - 33276208
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||||| |||  ||||||||| |||||||||||    
T  33276365 gcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgat 33276266  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||  |||||||| | |||||  | | ||| ||||||||||| |||||    
T  33276265 tcctttgctctcttctgttcttctataacctaataatgatttcaaatttttgtctatg 33276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 35040351 - 35040480
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||| | ||||||| |  ||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  35040351 ttgcatcccatgatgaattgcagcttctggtgatttttggcttctgataaacttgcttctgatgacgtcaccacttcatgagcactttgtcttcaggagc 35040450  T
Q  104 acttctcttcagacgttttaagcttccttt 133  Q
    | || |||||||||| ||||||||||||||    
T  35040451 agttttcttcagacgctttaagcttccttt 35040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 44821440 - 44821227
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttg----------- 92  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||||||               
T  44821440 ttgcatctcctgatgaactacagcttatggtgattctcagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtgttcaggagc 44821341  T
Q  93 ------tcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtc 184  Q
          |||||||||||| || |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||||||||||||    
T  44821340 gctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtc 44821241  T
Q  185 aaatttttgcctat 198  Q
    ||||||||| ||||    
T  44821240 aaatttttgtctat 44821227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10757606 - 10757800
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||| || |||| ||  |||||||||||||||||| ||||| |||||| ||||| |||||||||    ||||| |    
T  10757606 gtcttgcatctcctgatgaacttcagcttttgatgatctt--gcttctgatgaacttgctcctgatgacgtcatcactttaggagcactaaa-cttcaag 10757702  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| ||| || |||||||||||| ||||||||||| ||||||| |||||||| ||||||||  | ||||| ||||||||||| |||||    
T  10757703 agcacttctcttcaaacgcttcaagcttcctttt-gttgattccttagctctcttttgttctttcagaacctaataaagatatcaaatttttgtctatg 10757800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 25448339 - 25448224
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  25448339 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaagacctttt 25448240  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  25448239 taagatatcaaatttt 25448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 29216057 - 29216178
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    ||||||| ||| ||||||||||||| || || |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||    
T  29216057 cttcaggggcattttgtcttcaggaacagttttcttcagacgctttaagcttcctttttgttgattcttttgatctctattgttcttccaagaccttttt 29216156  T
Q  177 aagatgtcaaatttttgcctat 198  Q
    | ||||||||||||||| ||||    
T  29216157 aggatgtcaaatttttgtctat 29216178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 2327214 - 2327092
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| | || |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  2327214 cttcaggagcgccttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 2327115  T
Q  176 taagatgtcaaatttttgcctat 198  Q
    ||||||||||| |||||| ||||    
T  2327114 taagatgtcaattttttgtctat 2327092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 26702019 - 26701854
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||| ||||||||||  ||||||||||||| ||||| |||||||||||||||||||||| | |||| ||||||| |||||| ||| |||||||||||||    
T  26702019 catcttctgatgaactttagcttctggtgatcttcagtttctgatgaacttgcttctgatgatgtcatcacttcatgagcac-ttgacttcaggagcact 26701921  T
Q  107 tctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacct 172  Q
    | |||||| ||| || |||||||| || |||||||||| | |||||  | |||||||||||||||||    
T  26701920 tttcttcatacgcttcaagcttcccttatgttgattccatagctcttaatttgttcttccagaacct 26701854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 35402047 - 35402215
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagcttc-----------c 130  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||| |||||||||| | | || |||||||           |    
T  35402047 gcttctgatgaacttgcttctgatgaggtcatcacttcaggagcacttgtgtcttcaggagcgcttctcttcatatgcttcaagcttcctttttgttttc 35402146  T
Q  131 tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||    
T  35402147 tttttgttgattccattgctctcttttgttcttccataacctttttaagatgacaaatttttgtctatg 35402215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 1578124 - 1578229
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||||  | ||||| |||||||||||    
T  1578124 cttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttctttcagaacctaataaagatatcaaatttttg 1578223  T
Q  194 cctatg 199  Q
     |||||    
T  1578224 tctatg 1578229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 21029001 - 21029114
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaa 124  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||| ||| ||| |||||||||| |||||| | | |||||    
T  21029001 agcttctggtgatcttcagcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-ttgacttgaggagcacttttcttcatatgctttaa 21029099  T
Q  125 gcttcctttttgttg 139  Q
    |||||||||||||||    
T  21029100 gcttcctttttgttg 21029114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 21191719 - 21191590
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| |||| | |||||||||||||| |||||||| | || |||||||||| |||||||||    
T  21191719 gcttcagatgaacttgcttctgatgacgtcatcacttcaggaggactt-gacttcaggagcacttttcttcagatgcttcaagcttccttcttgttgatt 21191621  T
Q  143 cctttgctctctattgttcttccagaacctt 173  Q
    ||  |||||||  ||||||||||||||||||    
T  21191620 ccaatgctctcgtttgttcttccagaacctt 21191590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 19717796 - 19717901
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||  | | ||| |||||||||||    
T  19717796 cttcaggagcacttctcttcagacgctttaagcttcctttttattgattcctttgccctcttttgttcttccagaacctaatgatgatttcaaatttttg 19717895  T
Q  194 cctatg 199  Q
     |||||    
T  19717896 tctatg 19717901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 28492300 - 28492146
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||| | ||||||  ||| |||||||||||||||||||||||||||| |||||| ||                 ||| |||    
T  28492300 gtcttgcatctcctgatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatgacgtcatca-----------------cttgagg 28492218  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||| || ||||||||||||||    
T  28492217 agcacttctcttcagacgctttaagcttcctttttgttgattcatttgttctcttttattcttccagaacct 28492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 23036369 - 23036201
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagcttc-----------c 130  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||| |||||| | || |||||||           |    
T  23036369 gcttctgatgaaattgcttctgatgatgtcatcacttcaggagcacttgtgtcttcaggagcgcttctattcagatgcttcaagcttcctttttgttttc 23036270  T
Q  131 tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||||||||| |||||||||| |||||    
T  23036269 tttttgttgattccattgctcttttttgttcttccagaacgtttttaagatgacaaatttttgtctatg 23036201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 38282857 - 38282979
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||||| |||||||  |     
T  38282857 cttcaggaacattttgtcttcaggagcagttctcttcagacgctttaagcttcctttttattgattcatttgctctattttgttcttctagaacctaatg 38282956  T
Q  177 aagatgtcaaatttttgcctatg 199  Q
    | ||| ||||||||||| |||||    
T  38282957 atgatctcaaatttttgtctatg 38282979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 20954261 - 20954173
Alignment:
Q  77 cttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttc 164  Q
    |||||||||||||| ||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||    
T  20954261 cttcaggagcacttctgttttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttc 20954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 22464597 - 22464486
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttcc-agaacctttt 175  Q
    |||||||| ||||||||||||||||||| || |||||| |   ||||||||||||||||||||||||||||||||| |||||||||||| |||   ||||    
T  22464597 cttcaggaacactttgtcttcaggagcagttttcttcatatactttaagcttcctttttgttgattcctttgctctatattgttcttccaagactttttt 22464498  T
Q  176 taagatgtcaaa 187  Q
    ||||||||||||    
T  22464497 taagatgtcaaa 22464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 30893301 - 30893412
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    ||||| || ||| |||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||| | || ||| ||||| |||||||||    
T  30893301 agcttttggtgatcttgcttctgatgacgtcatcacttcaggagtactttgacttcaggagcacttctcttcagatgcttcaagtttcctctttgttgat 30893400  T
Q  142 tcctttgctctc 153  Q
    ||||| ||||||    
T  30893401 tccttagctctc 30893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 19170191 - 19170061
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc---tcttcagacgttttaa-gcttc-cttttt 135  Q
    |||||||||||||||  ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    ||||||| | ||||| ||||| ||||||    
T  19170191 gcttctgatgaacttttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcaaaacttcagatgctttaaggcttctcttttt 19170092  T
Q  136 gttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||| |||||||||||    
T  19170091 gttgattcctttgctctcttttgttcttcca 19170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 21120964 - 21120867
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    ||||||||||||||||  |||||||||||||   |||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||| |||||    
T  21120964 catctcctgatgaactgcagcttctggtgatacacagcttctgatgaatttgcttctgatgacgtcatcacttcagaagcactttgtcttcaagagca 21120867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 21984777 - 21984962
Alignment:
Q  9 tctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcactt 107  Q
    ||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||| |||||||| |||| ||    ||||||||||| ||    
T  21984777 tctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcaattcaaacttcaggagcagtt 21984876  T
Q  108 ctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
     |||||||||| || |||||| |||||||||||||    ||||||| || |||||||| ||  |||  ||||||||||||||||||    
T  21984877 ttcttcagacgcttaaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaatttt 21984962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 42284807 - 42284907
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||| ||||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||| ||||||    
T  42284807 atcttctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgtctttaggcgcactt 42284906  T
Q  108 c 108  Q
    |    
T  42284907 c 42284907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 21204772 - 21204621
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttga 140  Q
    |||||||| |||||| ||||||||| |||||| |||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||| ||||||||||||    
T  21204772 gcttctgacgaactttgcttctgatgacgtcatcacttcagaagcacgttgtcttcaggagcacttttctttagacgctttaagcttccctttttgttga 21204673  T
Q  141 ttcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |    ||||||| || |||||||| ||  |||  ||||||||||||||||||    
T  21204672 tgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaatttt 21204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 37642431 - 37642529
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||  ||||||||||||| |  |||||||||||||||| |||||| || |||||| |||||||| |||||||||||||||||||||||||    
T  37642431 tcctgatgaactgcagcttctggtgatatatagcttctgatgaactttgcttctaatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 37642529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 21544198 - 21544303
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggag 102  Q
    |||||||| ||||||||||  |||||||||||||   ||||||||||||||||| ||||||||| | |||| ||||||||  ||||||||||||||||||    
T  21544198 ttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgatgtcatcacttcagaggcactttgtcttcaggag 21544297  T
Q  103 cacttc 108  Q
    ||||||    
T  21544298 cacttc 21544303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 21703052 - 21703117
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  21703052 gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactttgtcttcaggagcacttc 21703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 48704491 - 48704596
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||| ||| | || ||||||| |||||||||||| | ||||||||| |||||||||||||||||  | ||||| |||||||||||    
T  48704491 cttcaggagcacttctctttagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacctaataaagatatcaaatttttg 48704590  T
Q  194 cctatg 199  Q
     |||||    
T  48704591 tctatg 48704596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 30572421 - 30572563
Alignment:
Q  59 cttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta- 155  Q
    |||||||| |||||| |||||||||||||||||   ||||||||||| || |||||||||| ||||| ||| |||||||||||||   |||||||| ||     
T  30572421 cttctgatgacgtcatcacttcaggagcactttaaacttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttat 30572520  T
Q  156 ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    || ||||||||  ||| ||||||||||||||||||||| ||||    
T  30572521 ttattcttccaagaccattttaagatgtcaaatttttgtctat 30572563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 19215790 - 19215888
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||| ||||||| ||  |||||||||||| |||  |||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||    
T  19215790 atcttctgatgatctgcagcttctggtgaattt--gcttctgatgaatttgcttctgatgacgacatcacttcagaagcactttgtcttcaggagcactt 19215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 21135060 - 21134963
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    ||||||||||||||||  | |||||||||||   || ||||||||||||||||||||||| |||||| || ||||| ||||||||||||||| |||||    
T  21135060 catctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttctgatgacgtcatcatttcagaagcactttgtcttcaagagca 21134963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 10251266 - 10251382
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    ||||||||||||||   ||||||||||| || |||||||||| ||||||||||| |||||||||||   |||||||| || |||||||||||  ||||||    
T  10251266 cttcaggagcacttcaacttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttatttgttcttccaagaccttt 10251365  T
Q  175 ttaagatgtcaaatttt 191  Q
    ||||||||||| |||||    
T  10251366 ttaagatgtcatatttt 10251382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 17024837 - 17024693
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaa 124  Q
    ||||||||||||| ||  |||||||||||||||||||||||| |||| | |||||||| ||||| ||  ||| || | | ||| |||||||| | || ||    
T  17024837 agcttctggtgatgtt--gcttctgatgaacttgcttctgatgacgttatcacttcagaagcac-ttaactttagaacctcttttcttcagatgcttcaa 17024741  T
Q  125 gcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||| ||||||||||| ||| ||||  |||||||||||||||||    
T  17024740 gcttccttcttgttgattccattgatctcatttgttcttccagaacct 17024693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20954369 - 20954317
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20954369 gtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 20954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 12613633 - 12613535
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||| ||||||||||||||||| |||||| |||||||||||||| ||| |||||| | ||||  |||||||| | || ||||||||||||||||||||||    
T  12613633 ttctaatgaacttgcttctgatgacgtcatcacttcaggagcac-ttgacttcagaatcactattcttcagatgcttcaagcttcctttttgttgattcc 12613535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 23024982 - 23025049
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  23024982 cagcttttgatgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggaggacttc 23025049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 46089219 - 46089318
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttga 140  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||  | ||||| ||||| || |||||||||  ||||||||| ||||||||||||    
T  46089219 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcatgagcagttttcttcagacactttaagcttccctttttgttga 46089318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 48570022 - 48569895
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-----tttttgttgattcctttgctctctatt-gttcttccagaac 170  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||      |||||||||||   |||||||| |||| |||||||||  ||    
T  48570022 cttcaggagcgctttatcttcaggagcagttttcttcagacgatttaagcttcactttttttttgttgatgtatttgctctttatttgttcttccaagac 48569923  T
Q  171 ctttttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||||||| ||||    
T  48569922 ctttttaagatgtcaaatttttgtctat 48569895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 34255369 - 34255304
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||||||||||| ||||||  |||||||  ||||||||||||||||||||||||    
T  34255369 gcttctgatgaacttgcttctgatgacgtcattacttcagaggcactttgtcttcaggagcacttc 34255304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 2327334 - 2327272
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||    
T  2327334 ttgcatctcctgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctgat 2327272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 21702998 - 21703060
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  |||||||||||| |||||||||||||    
T  21702998 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgtacttgcttctgat 21703060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 22464700 - 22464643
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctg 64  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||    
T  22464700 catctcctgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 48570073 - 48570013
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||    
T  48570073 gcttatgatgaacttgtttctgatgacgtcatcatttcaggagcactttgtcttcaggagc 48570013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 10251221 - 10251280
Alignment:
Q  49 gatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||||||    
T  10251221 gatgaacttgcttttgatgacgtcatcacttcatgagcattttgtcttcaggagcacttc 10251280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 48570127 - 48570065
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||| || |||||| ||||    
T  48570127 ttgcatctcctgatgaattacagcttctggtgattctcagcttctgataaaattgcttatgat 48570065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10251161 - 10251218
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgctt 61  Q
    |||||||||||||||||||  ||||||||||||||   ||||||||||||||||||||    
T  10251161 ttgcatctcctgatgaactgcagcttctggtgattcatagcttctgatgaacttgctt 10251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1900529 - 1900581
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  1900529 gtcttgcatctcctgatgaactagatcttctggcgatctttagcttctgatga 1900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 21703136 - 21703227
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| |||||||||| ||||| ||||||   |||||||| |||| |||||||||  ||| ||||||||||||||||||||| ||||    
T  21703136 tcttcagacgctttaagcttctcttttggttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaatttttgtctat 21703227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 18896381 - 18896299
Alignment:
Q  90 ttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||| | | ||| |||||||| | || | |||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  18896381 ttgtcttcagaacctcttttcttcagatgcttcatgcttccttcttgttgattccattgctctcatttgttcttccagaacct 18896299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 35040474 - 35040524
Alignment:
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  35040474 ttcctttgctctttattgttcttctaagacctttttaagatgtcaaatttt 35040524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 20954295 - 20954246
Alignment:
Q  61 tctgataacgtcaccacttcaggagcac-tttgtcttcaggagcacttct 109  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  20954295 tctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttct 20954246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 22464649 - 22464584
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcacc-acttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||| || ||||||||||||| |||||||| | |||| ||||||||||||||||||| |||||    
T  22464649 gcttctggtggacttgcttctgatgacgtcacctaattcatgagcactttgtcttcaggaacactt 22464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 25448110 - 25448061
Alignment:
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||| |||||||||||||||  |||||||||||||||||| ||||    
T  25448110 tcctttgctttctattgttcttccaagacctttttaagatgtcaattttt 25448061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 29215982 - 29216031
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  29215982 ttgcatctcctgatgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38282750 - 38282786
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38282750 gtcttgcatctcctgatgaactagagcttttggtgat 38282786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 22201607 - 22201552
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcac-tttgtcttcaggagcacttctctt 112  Q
    ||||||||| | |||| |||||||||||||| |||||||||||| |||||||||||    
T  22201607 gcttctgatgaagtcatcacttcaggagcacttttgtcttcaggggcacttctctt 22201552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 23025053 - 23025128
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagctt-cctttttgttgat-tcctttgctctcta-ttgttcttcca 166  Q
    ||||||||||| || |||||||||| ||||||||| ||||||||||||| | ||||||||| || |||||||||||    
T  23025053 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtactttgctctttatttgttcttcca 23025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17371211 - 17371273
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||  |||||||||  ||||||||||||| | |||||||||||  |||||||||||||    
T  17371211 ttgcatcttttgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttctgat 17371273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 17371280 - 17371346
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||| |||||| || |||||| |||||||    |||||||||||||||||||||||    
T  17371280 gcttctgatgaactttgcttctaatgacgtcatcacttcaaagacactttgtcttcaggagcacttc 17371346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 46089165 - 46089227
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||| |||||||||  |||||||||||||   || ||| |||||||||||||||||||    
T  46089165 ttgcatctcatgatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgat 46089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 1900571 - 1900620
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||||| | ||||  ||||||||| ||||||||||||||||||||||    
T  1900571 gcttctgatgatgtcattacttcaggaacactttgtcttcaggagcactt 1900620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 7507672 - 7507764
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  7507672 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 7507764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 7518269 - 7518361
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  7518269 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 7518361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12284607 - 12284661
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaactt 57  Q
    ||||||||||| ||||||||||  ||||||||||||| ||  |||||||||||||||    
T  12284607 gtcttgcatcttctgatgaacttcagcttctggtgatctt--gcttctgatgaactt 12284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 20109735 - 20109686
Alignment:
Q  123 aagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||| |||||| ||| ||||  |||||||||||||||||    
T  20109735 aagcttcctttttgtagattccattgttctcatttgttcttccagaacct 20109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 51629041 - 51628949
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  51629041 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 51628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 51656302 - 51656210
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  51656302 gcttctgatgactttctgcttctgatgactttctgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 51656210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4167612 - 4167687
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  4167612 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 4167687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 4178266 - 4178326
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  4178266 ttgcttctgatgacgtcatcacttcagaagcacttccgcttcaggagcagttttcttcaga 4178326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5639564 - 5639489
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  5639564 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 5650121 - 5650046
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  5650121 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5650046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 19179313 - 19179388
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19179313 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19179388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 19188173 - 19188248
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  19188173 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 19188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 22019680 - 22019712
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  22019680 ttgttgattcctttgctctcttttgttcttcca 22019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22154041 - 22154077
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  22154041 gtcttgcatctcctgatgaacttcagcttctggtgat 22154077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 22655822 - 22655854
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  22655822 ttgttgattcctttgctctcttttgttcttcca 22655854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 23065278 - 23065310
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  23065278 ttgttgattcctttgctctcttttgttcttcca 23065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 26547993 - 26547961
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  26547993 ttgttgattcctttgctctcttttgttcttcca 26547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 33084915 - 33084990
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  33084915 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 33084990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 35013275 - 35013350
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  35013275 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 35013350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 9e-69; HSPs: 107)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 20151954 - 20151767
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||    
T  20151954 ttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaacttgtttctgatgacgtcactatttcaggagcactttgtcttcaggagc 20151855  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  20151854 agttttcttcagacgctttaagcttcctttttgttaattactttgctctctattgttcttccaagacctttttaagatgtcaaatttt 20151767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 6574042 - 6573855
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||  | ||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |||    
T  6574042 ttgcatcttctgatgaactgcaacttctagtgattttcagcttctgatgaacttgcttctgatgacgtcactactttaggagcactttgtcttcagaagc 6573943  T
Q  104 acttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | || |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||| |||||    
T  6573942 atttttcttcagatgttttaagcttcctttttgttaattcctttgctccctattgttcttccaagatctttttaagatgtcagatttt 6573855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23235186 - 23235398
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagctt--------------ctgatgaacttgcttctgataacgtcaccacttcaggagc 86  Q
    |||||||||||| |||||||||||||||||||||||||||||||||              |||||||||||||||||||| |||||| ||||||||||||    
T  23235186 gtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagc 23235285  T
Q  87 actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 186  Q
    |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||| ||||||||| ||||||| |||||||||||||    
T  23235286 actttgacttcaagagcacttctcttcagacgctttaagcttactttttgttgattcaattgctctcttttgttcttctagaacctatttaagatgtcaa 23235385  T
Q  187 atttttgcctatg 199  Q
    ||||||| |||||    
T  23235386 atttttgtctatg 23235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 28711606 - 28711429
Alignment:
Q  16 atgaactagagcttctggtgattttcag-cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttca 114  Q
    |||||||  ||||||||||||||||  | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  28711606 atgaactgcagcttctggtgattttttggcttctgataaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttca 28711507  T
Q  115 gacgttttaagcttcct-ttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
     ||| |||||||||||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  28711506 aacgctttaagcttccttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 28711429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 25829337 - 25829468
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||| ||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25829337 agcttctggtgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttga 25829436  T
Q  141 ttcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||| |||||||||||||||||    
T  25829437 ttcctttgctctcttttgttcttccagaacct 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 22317881 - 22318003
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaaccttttt 176  Q
    |||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22317881 cttcagtagcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttctagaaccttttt 22317980  T
Q  177 aagatgtcaaatttttgcctatg 199  Q
    ||||||||||||||||| |||||    
T  22317981 aagatgtcaaatttttgtctatg 22318003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 9015234 - 9015086
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||  ||||| ||||||||||||||||| | || |||||||| |||||||||||||    
T  9015234 ttctgatgaacttgcttctgatgacgtcatcacttcaggatcacttttacttcaagagcacttctcttcagatgcttcaagcttccattttgttgattcc 9015135  T
Q  145 tttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  9015134 tttgctctcttttgttcttccagaacctatttaagatttcaaatttttg 9015086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 30667224 - 30667374
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||||| | || ||||||||||||||||||||    
T  30667224 gcttctgacgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcgggagcacttctcttcagatgcttcaagcttcctttttgttgatt 30667323  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |  |||||||||||||||||||||||||||  | ||||| |||||||||||    
T  30667324 caattgctctctattgttcttccagaacctaataaagatatcaaatttttg 30667374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 22260639 - 22260769
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  22260639 gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcatttttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgat 22260738  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||| ||||||||| |||||||    
T  22260739 tcctttgctctcttttgttcttctagaacct 22260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 28140540 - 28140391
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||| ||||||||  |||||||| |||  |   ||||||||||||||||||| |||| |||||| ||||||||||||||||| | ||||||    
T  28140540 gtcttgcatctcccgatgaacttcagcttctgatgagat---gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcacttttgacttcag 28140444  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctct 152  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28140443 gagcacttctcttcagacgttctaagcttcctttttgttgattccttagctct 28140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 19540595 - 19540794
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||| |||||||||  ||||||||||||| ||  |||||||||||  | ||||||||| |||||| |||||||||||||||  | |||||||    
T  19540595 gtcttgcatctcatgatgaacttcagcttctggtgatctt--gcttctgatgaggt-gcttctgatgacgtcatcacttcaggagcacta-gacttcagg 19540690  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatgc 200  Q
    | ||||| |||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||  | || || ||||||||||| |||||     
T  19540691 aacacttttcttcagacgctttaagctttctttttgttgattccttagctctcttttgttcttccaaaacctaataaatatatcaaatttttgtctatgg 19540790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 20568615 - 20568485
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    ||||||||||||||||||||  || |||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  20568615 gcttctgatgaacttgcttcaaatgacgtcatcacctcatgagcacttttgtcttcaggagcacttatcttcagacgtcttaagcttcctttttgttgat 20568516  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    |||||| |||||| ||||||||| |||||||    
T  20568515 tcctttactctcttttgttcttcaagaacct 20568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 24576283 - 24576440
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||| |||||||||||| |||||| |||||||| ||||||||| ||||| || ||||| |||||| | |||| |||||||||||||||||||    
T  24576283 agcttctgatgaccttgcttctgatgacgtcatcacttcagaagcactttgacttcatgaacacttatcttcatatgtttcaagcttcctttttgttgat 24576382  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||| |||||| || || ||||||||||||||  | ||||| ||||||||||| |||||    
T  24576383 tccattgctccctttttttcttccagaacctaataaagatatcaaatttttgtctatg 24576440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 30621437 - 30621578
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctatt 157  Q
    ||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||| ||| | || |||||||||||||||||||||| ||||||||||||    
T  30621437 gcttctgatgacgtcatcacttcaggagcactttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctatt 30621536  T
Q  158 gttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||  | ||||| |||||||| || |||||    
T  30621537 gttcttccagaacctaataaagatatcaaatttatgtctatg 30621578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 30624058 - 30624199
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctatt 157  Q
    ||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||| ||| | || |||||||||||||||||||||| ||||||||||||    
T  30624058 gcttctgatgacgtcatcacttcaggagcactttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctatt 30624157  T
Q  158 gttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||  | ||||| |||||||| || |||||    
T  30624158 gttcttccagaacctaataaagatatcaaatttatgtctatg 30624199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 28550848 - 28550744
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  28550848 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatgacgtcatcacttcaggagcactttgtcttcaggagc 28550749  T
Q  104 acttc 108  Q
    |||||    
T  28550748 acttc 28550744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 28701043 - 28700928
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  28701043 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 28700944  T
Q  176 taagatgtcaaatttt 191  Q
    ||||||||||||||||    
T  28700943 taagatgtcaaatttt 28700928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 39037537 - 39037392
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagc 126  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||| ||  |||||| |||||||||||||||| | || ||||    
T  39037537 cttccggtgatcttcagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-ttaacttcagtagcacttctcttcagatgcttcaagc 39037439  T
Q  127 ttcctttttgttgattcctttgctctcta-ttgttcttccagaacct 172  Q
    |||||||||||||||||| | |||||| | |||||||||||||||||    
T  39037438 ttcctttttgttgattccatagctctcaatttgttcttccagaacct 39037392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 13963824 - 13963719
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||||||| |||||| |||| || | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13963824 cttcaggagcacttcttttcagatgtttcaaacgtcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 13963725  T
Q  194 cctatg 199  Q
     |||||    
T  13963724 tctatg 13963719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 24850530 - 24850402
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||  ||||||  ||||||||||||||| | |||||||||||||| |||||||| | || ||||||||||||||||||||    
T  24850530 gcttctgatgaacttgcttctgacgacgtcattacttcaggagcactt-gacttcaggagcacttttcttcagatgcttcaagcttcctttttgttgatt 24850432  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||| ||||||| ||||||||| |||||||    
T  24850431 ccttagctctcttttgttcttcgagaacct 24850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 40332261 - 40332362
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  40332261 catctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatgacgtcatcacttcaggagcactttgtcttcaggagcact 40332360  T
Q  107 tc 108  Q
    ||    
T  40332361 tc 40332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 31800717 - 31800595
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||||||||||||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||  || ||||    
T  31800717 cttcaggagcactttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacatttt 31800618  T
Q  176 taagatgtcaaatttttgcctat 198  Q
    ||| |||||||||||||| ||||    
T  31800617 taatatgtcaaatttttgtctat 31800595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 38781666 - 38781771
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||| |||||||||||| | || |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  38781666 cttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcaattgctctcttttgttcttccagaacctttttaagatgacaaatttttg 38781765  T
Q  194 cctatg 199  Q
     |||||    
T  38781766 tctatg 38781771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 21537113 - 21536958
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||| ||| |||||||||||| ||||||  ||||||||||||||  | |||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  21537113 gcttctggtgagcttgcttctgatgacgtcattacttcaggagcacta-gacttcaggagcacttctcttcagatattttaagtttcctttttgttgatt 21537015  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
     | | ||||||| ||||||||||| |||||  | ||||| ||||||||||| |||||    
T  21537014 tcatagctctcttttgttcttccaaaacctaataaagatatcaaatttttgtctatg 21536958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 40782704 - 40782808
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtctt-caggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||| | || |||||||||||||||||||    
T  40782704 gcttctggtgaacttgcttctgatgacgtcatcacttcaggagcactttgactttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 40782803  T
Q  142 tcctt 146  Q
    |||||    
T  40782804 tcctt 40782808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 1586959 - 1586862
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||| ||||||||| ||||||||||||    
T  1586959 catctcctgatgaactccagcttctggtgattctcagcttctgatgaacttgtttctgatgacgtcatcacttcatgagcactttatcttcaggagca 1586862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 31967973 - 31967869
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||  ||||||||||||||  || ||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  31967973 ttgcatcttctgatgaactgcagcttctggtgattcacaacttcttatgaacttgcttctgatgatgtcatcacttcaggagcactttgtcttcaggagc 31967874  T
Q  104 acttc 108  Q
    |||||    
T  31967873 acttc 31967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 38631222 - 38631345
Alignment:
Q  77 cttcaggagcactt-tgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||||||| |||||||||||||||||||||||||| | || ||||||| |||||||||||| ||||||||||| ||||| |||||||||||  |    
T  38631222 cttcaggagcacttctgtcttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttctttgctctcttttgtttttccagaacctaat 38631321  T
Q  176 taagatgtcaaatttttgcctatg 199  Q
     | ||| ||||||||||| |||||    
T  38631322 aatgatttcaaatttttgtctatg 38631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 25037094 - 25036977
Alignment:
Q  82 ggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagat 181  Q
    |||||| |||| ||||| ||||||||||||||||| | |||||||||| |||||||||||||||||||||||| || ||||||||||||||  | |||||    
T  25037094 ggagcattttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagat 25036995  T
Q  182 gtcaaatttttgcctatg 199  Q
     |||||||| || |||||    
T  25036994 atcaaatttctgtctatg 25036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 25041201 - 25041084
Alignment:
Q  82 ggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagat 181  Q
    |||||| |||| ||||| ||||||||||||||||| | |||||||||| |||||||||||||||||||||||| || ||||||||||||||  | |||||    
T  25041201 ggagcattttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagat 25041102  T
Q  182 gtcaaatttttgcctatg 199  Q
     |||||||| || |||||    
T  25041101 atcaaatttctgtctatg 25041084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 44840603 - 44840705
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||| |||||||||  |||||||| ||| |||  ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  44840603 ttgcatctcttgatgaactgcagcttctgatgaattt--gcttctgatgatcttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 44840700  T
Q  104 acttc 108  Q
    |||||    
T  44840701 acttc 44840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 6392824 - 6392914
Alignment:
Q  13 ctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||  | ||| |||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  6392824 ctgatgaactgcaacttatggtgatttttagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 6392914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 31327817 - 31327672
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttga 140  Q
    ||||| |||||||||||||| |||| ||||||     |||||||| ||||  ||||||||||| || ||||||| ||  ||||||||| |||||||||||    
T  31327817 agcttatgatgaacttgcttatgatgacgtca-----tcaggagcgctttaacttcaggagcagttttcttcaggcgcgttaagcttctctttttgttga 31327723  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | |||||||||| |||||||||||||| ||||||||||||| |||| ||||    
T  31327722 tgcctttgctctttattgttcttccaggacctttttaagatatcaagtttt 31327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 31334538 - 31334393
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttga 140  Q
    ||||| |||||||||||||| |||| ||||||     |||||||| ||||  ||||||||||| || ||||||| ||  ||||||||| |||||||||||    
T  31334538 agcttatgatgaacttgcttatgatgacgtca-----tcaggagcgctttaacttcaggagcagttttcttcaggcgcgttaagcttctctttttgttga 31334444  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    | |||||||||| |||||||||||||| ||||||||||||| |||| ||||    
T  31334443 tgcctttgctctttattgttcttccaggacctttttaagatatcaagtttt 31334393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24377280 - 24377369
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    |||||||||||| |||||||||  ||||||||||||| || |||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  24377280 gtcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatgacgtcatcacttcaggagcactt 24377369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 33074460 - 33074524
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  33074460 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcactt 33074524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 33074511 - 33074633
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||   |||||||| ||||  | |||||  ||||||     
T  33074511 cttcaggagcactttatcttcaggagcaattttcttcagacgttttaagcttccctttttgttgatgtatttgctctttatttgttttccaagaccttta 33074610  T
Q  176 taagatgtcaaatttttgcctat 198  Q
    |||||||| ||||||||| ||||    
T  33074611 taagatgttaaatttttgtctat 33074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 45086945 - 45086851
Alignment:
Q  98 aggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||| || |||||||||| ||||||||||| |||||||||| | ||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  45086945 aggagcagttttcttcagacgctttaagcttccctttttgttgacttctttgctctttattgttcttccaaaacctttttaagatatcaaatttt 45086851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 34321736 - 34321619
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||| ||| |||||||||||||   |||||||| || |||||||||||  ||||||    
T  34321736 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttatttgttcttccaagaccttt 34321637  T
Q  175 ttaagatgtcaaattttt 192  Q
    ||||||||||||||||||    
T  34321636 ttaagatgtcaaattttt 34321619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 18376751 - 18376652
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||| || |||||||| | || |||||||||||||||||||||||| ||||||| |||||||||||||||||  | | ||| |||||||||||    
T  18376751 cttcaggagcatttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctaataacgatatcaaatttttg 18376652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 22776198 - 22776131
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| |||||    
T  22776198 cagcttctgatgaacttgcttctaatgacgtcatcacttcaggagcactttgtcttcaggagtacttc 22776131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 22781576 - 22781509
Alignment:
Q  41 cagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| |||||    
T  22781576 cagcttctgatgaacttgcttctaatgacgtcatcacttcaggagcactttgtcttcaggagtacttc 22781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 22802743 - 22802858
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| |||||| ||||| || |||||||||| ||||||||||| |||||||||||| | || |||| |||||||||||||  |||||||    
T  22802743 cttcaggatcgctttatcttcatgagcaattttcttcagacgctttaagcttccctttttgttgatttcattactctttattgttcttccaagacctttt 22802842  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  22802843 taagatatcaaatttt 22802858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 22187933 - 22187855
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||||||||| | || |||||||||||||| ||||||||||||||| | ||||||||||| |||||    
T  22187933 cttcaggagcacttctcttcagatgcttcaagcttcctttttgctgattcctttgctctattttgttcttccataacct 22187855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35743922 - 35743860
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  35743922 ttgcatctcctgatgaactacagcttctggtgattttcagcttccgataaacttgcttctgat 35743860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22317773 - 22317886
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttc---------------tgatgaacttgcttctgataacgtcaccacttcaggag 85  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||               |||||||||||||| |||| ||||||||||||||||||    
T  22317773 gtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatgatgacgtcaccacttcaggag 22317872  T
Q  86 cactttgtcttcag 99  Q
    ||||||||||||||    
T  22317873 cactttgtcttcag 22317886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 22454855 - 22454726
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||| |||||||||||  |||| | ||||||| |||||||  | |||||||||||||| |||||||| | || ||||||||||||||||||||    
T  22454855 gcttctgatgagcttgcttctgacgacgttatcacttcaagagcacta-gacttcaggagcacttttcttcagatgcttcaagcttcctttttgttgatt 22454757  T
Q  143 cctttgctctcta-ttgttcttccagaacct 172  Q
     | | |||||  | |||||||||||||||||    
T  22454756 tcatagctcttaatttgttcttccagaacct 22454726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 23392544 - 23392416
Alignment:
Q  43 gcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc---tcttcagacgttttaagcttc-ctttttgt 137  Q
    |||||||||||| || ||||||||| |||||| ||||| ||  ||||||||||||||||||||||||    ||||||| | |||| ||||| | ||||||    
T  23392544 gcttctgatgaattttgcttctgatgacgtcatcactttagaggcactttgtcttcaggagcacttcataacttcagatgatttaggcttctccttttgt 23392445  T
Q  138 tgattcctttgctctctattgttcttcca 166  Q
    |||||| |||||||||| |||||||||||    
T  23392444 tgattcttttgctctcttttgttcttcca 23392416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 22785531 - 22785466
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| ||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||    
T  22785531 gcttttgatgaacttgcttctgatgatgtcatcacttcaagagcactttgtcttcaggagcacttc 22785466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 22802693 - 22802750
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagga 101  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  22802693 cttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 22802750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 24377356 - 24377460
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||||  ||||||||| |||||||| | ||||||  | ||||| |||||||||||    
T  24377356 cttcaggagcacttctcttcagatgcttctagcttcctttttgttgattctattgctctcttttgttctt-ctgaacctaataaagatatcaaatttttg 24377454  T
Q  194 cctatg 199  Q
     |||||    
T  24377455 tctatg 24377460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 30557103 - 30557046
Alignment:
Q  93 tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgct 150  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  30557103 tcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgct 30557046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 3277204 - 3277284
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagca 87  Q
    |||||||| |||||||  ||||||| ||||||  ||||||||||||||||||||||| || |||||| |||||||||||||    
T  3277204 catctcctaatgaactccagcttctagtgattcccagcttctgatgaacttgcttctaatgacgtcatcacttcaggagca 3277284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 30557170 - 30557110
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  30557170 gcttttgatgaacttgcttctgatgacgtcatcaattcaggagcactttgtcttcaggagc 30557110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 45087033 - 45086969
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||| ||| |||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  45087033 gcttctggtgaccttgtttctgatgacgtcatcacttcaggagcactttgtcttcaggagcactt 45086969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 22272367 - 22272493
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||||||||| |||| || |||||| ||||||||||| | |||| |||||| | | ||| |||||||  | || || ||||||| |||||||||||    
T  22272367 ttctgatgaacttgtttctaatgacgtcatcacttcaggagta-tttgacttcagaaactcttttcttcagttgcttcaaccttccttcttgttgattcc 22272465  T
Q  145 tttgctctctattgttcttccagaacct 172  Q
     ||||||||  |||||||||||||||||    
T  22272466 attgctctcatttgttcttccagaacct 22272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 44881398 - 44881512
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctat 156  Q
    |||||||||| |||||| |||||||||||||||| | |||||  | | ||| |||||||| | || |||||||||| ||||||||| | ||||||||  |    
T  44881398 tgcttctgatgacgtcagcacttcaggagcactt-gacttcaaaatctcttttcttcagatgcttcaagcttccttcttgttgatttcattgctctcatt 44881496  T
Q  157 tgttcttccagaacct 172  Q
    ||||||||||||||||    
T  44881497 tgttcttccagaacct 44881512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 10009582 - 10009524
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctct 152  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||    
T  10009582 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctct 10009524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 22785585 - 22785523
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| ||||    
T  22785585 ttgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgat 22785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 28701092 - 28701034
Alignment:
Q  45 ttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||    
T  28701092 ttctgatgaactcacttctgatgatgtcaccacttcaggagcactttgtcttcaggagc 28701034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 31327885 - 31327823
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||||||||||    
T  31327885 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgat 31327823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 31334606 - 31334544
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||||||||||    
T  31334606 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgat 31334544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 34321856 - 34321794
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||||||||||    
T  34321856 ttgcatctcctgatgaattacagcttctagtgattctcagcttctgataaacttgcttctgat 34321794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 1586838 - 1586749
Alignment:
Q  111 ttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||| ||||||||||| |||||||||||   |||||||| |||| |||||||||  ||||||||||||||||||||||||| ||||    
T  1586838 ttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttttgtctat 1586749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 13963898 - 13963829
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgt 71  Q
    |||||||||| ||||||||||||||||||| ||||| || | ||||||| ||||||||||||||| ||||    
T  13963898 tcttgcatctactgatgaactagagcttctagtgatctttaacttctgaggaacttgcttctgatgacgt 13963829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25037180 - 25037128
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  25037180 gtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 25037128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25041287 - 25041235
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  25041287 gtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 25041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 34321787 - 34321727
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||| |||||| || ||||||||| |||||| |||||||||||||||||||||||||||||    
T  34321787 gcttatgatgatctcgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 34321727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 35743868 - 35743808
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||||||| || ||| ||||| | |||||||||||||||||||||    
T  35743868 gcttctgatgaacttgcttctgatgacatcatcactttaagagcactttgtcttcaggagc 35743808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 10009616 - 10009569
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  10009616 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 22187967 - 22187920
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  22187967 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 22187920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 3277274 - 3277380
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||| | | ||||||||||| |||||||||||   |||||||| |||| |||||||||  ||||||||||||||| |||||||    
T  3277274 cttcaggagcagttttcttcataagctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtaaaatttt 3277373  T
Q  192 tgcctat 198  Q
    || ||||    
T  3277374 tgtctat 3277380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 14581685 - 14581735
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  14581685 gcttctgatgacgtcatcacttcaggagcactttgtctttaggagcacttc 14581735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 30557239 - 30557177
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||  ||||||||||  ||||||||||||| || |||||||||||||||||||||||||    
T  30557239 ttgcatcctctgatgaactgcagcttctggtgatatttagcttctgatgaacttgcttctgat 30557177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 6392937 - 6392980
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctct 152  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  6392937 tcttcagacgctttaagcttcctttgtgttgattcctttgctct 6392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 19115425 - 19115488
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||| || ||||||||||  |||||||||| ||||||||  |||||||||||||||||    
T  19115425 tcttcagacgcttcaagcttccttcctgttgattccattgctctcatttgttcttccagaacct 19115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 20569773 - 20569823
Alignment:
Q  122 taagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||| |||||| ||||||||  |||||||||||||||||    
T  20569773 taagcttcctttttgtagattccattgctctcatttgttcttccagaacct 20569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 23184161 - 23184111
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||||||||| |||||||| | || ||||||||||||||||||||||    
T  23184161 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattcc 23184111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 23595418 - 23595368
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcc 144  Q
    |||||||||||||| |||||||| | || ||||||||||||||||||||||    
T  23595418 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattcc 23595368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20568671 - 20568635
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20568671 gtcttgcatctcctgatgaactacagcttctggtgat 20568635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22188023 - 22187971
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||| ||||||||||||  | ||||||||||| |||||||||||||||    
T  22188023 gtcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgatga 22187971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 1084188 - 1084251
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||| ||||||||||| || |||||||||| | |||||||||||||| | |||| |||||    
T  1084188 ttgcatcttctgatgaactacagtttctggtgatatacagcttctgatgaaatagcttttgata 1084251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 18430754 - 18430675
Alignment:
Q  93 tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||| | ||| |||||| ||| || |||||||||| |||||||||   ||||||||  |||||||||||||||||    
T  18430754 tcttcaggacctcttgtcttcatacgcttcaagcttccttcttgttgattatattgctctcatttgttcttccagaacct 18430675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 25189638 - 25189717
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacct 172  Q
    |||||||||||||| | |||||| | || ||||||||||||||| |||||| | |||||  | |||||||||||||||||    
T  25189638 cttcaggagcacttttgttcagatgcttcaagcttcctttttgtcgattccatagctcttaatttgttcttccagaacct 25189717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 26618906 - 26618847
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccaga 168  Q
    |||||||||  || |||||||||| ||||||||||| ||||||||  |||||||||||||    
T  26618906 tcttcagactcttcaagcttccttcttgttgattccattgctctcatttgttcttccaga 26618847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 30621396 - 30621447
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||| |||| | ||||| ||||| |||||||||||||||    
T  30621396 tcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30621447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 30624017 - 30624068
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||| |||| | ||||| ||||| |||||||||||||||    
T  30624017 tcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 18376801 - 18376755
Alignment:
Q  27 cttctggtgattttcagcttctgatgaacttgcttctgataacgtca 73  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  18376801 cttctggtgatcttctgcttctgatgaacttacttctgatgacgtca 18376755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 24793761 - 24793727
Alignment:
Q  132 ttttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||||| |||||||||||    
T  24793761 ttttgttgattcctttgctctcttttgttcttcca 24793727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 24814336 - 24814302
Alignment:
Q  132 ttttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||||| |||||||||||    
T  24814336 ttttgttgattcctttgctctcttttgttcttcca 24814302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 1084328 - 1084429
Alignment:
Q  76 acttcaggagca-ctttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctt 173  Q
    |||||||||||| ||||  ||||||  ||| || |||||||| | |||| ||||| ||| ||| ||||||||||||||||| |||||||||||  |||||    
T  1084328 acttcaggagcatctttaacttcagaggcaattttcttcagatgctttaggcttctcttcttgctgattcctttgctctcttttgttcttccaagacctt 1084427  T
Q  174 tt 175  Q
    ||    
T  1084428 tt 1084429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7609141 - 7609191
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| ||  |||||||||||    
T  7609141 gtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatga 7609191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 11395001 - 11394909
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  11395001 gcttctgatgactttctgcttctgatgactttttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 11405317 - 11405225
Alignment:
Q  26 gcttctggtgattttcagcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||| ||| |||| |||||||||||  ||  ||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  11405317 gcttctgatgactttctgcttctgatgactttttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11405225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 14581740 - 14581845
Alignment:
Q  95 ttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||||||||| || |||| ||||  ||||||||||| |||||||||||    ||||||| |||| ||||| ||| ||||  |||||||||||||||||||    
T  14581740 ttcaggagcaattttcttgagacactttaagcttccctttttgttgatgtacttgctctttatttgttctcccaaaaccaatttaagatgtcaaattttt 14581839  T
Q  193 gcctat 198  Q
    | ||||    
T  14581840 gtctat 14581845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 4210290 - 4210365
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| | ||||||||||||||   ||||||||||| || ||||||||    
T  4210290 gcttctgatgaccttctgcttctgatgacgtcatctcttcaggagcacttcagcttcaggagcagttttcttcaga 4210365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9897403 - 9897328
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  9897403 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 9897328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 9907991 - 9907916
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  9907991 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 9907916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10009670 - 10009634
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  10009670 gtcttgcatctcctgatgaacttcagcttctggtgat 10009634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 11388623 - 11388563
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| | ||||||||||| |||  ||||||||||| || ||||||||    
T  11388623 ttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11388563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 20070710 - 20070635
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  20070710 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 20070635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 20236793 - 20236868
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  20236793 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 20236868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25829313 - 25829349
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  25829313 gtcttgcatctcctgatgaactttagcttctggtgat 25829349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 36251675 - 36251615
Alignment:
Q  56 ttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  36251675 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 36251615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 40222732 - 40222807
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  40222732 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 40222807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 40251593 - 40251668
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  40251593 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 40251668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 41121568 - 41121492
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaac 170  Q
    |||||||||||| | |||||||| | || |||||||||| ||||| ||||| ||||| ||  ||||||||| |||||    
T  41121568 cttcaggagcacctttcttcagatgcttcaagcttccttcttgtttattccattgctttcatttgttcttcgagaac 41121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 125; Significance: 1e-64; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 212594 - 212750
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  212594 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgatt 212693  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  212694 ccttagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatg 212750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 246172 - 246068
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  | ||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  246172 ttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 246073  T
Q  104 acttc 108  Q
    |||||    
T  246072 acttc 246068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6124 - 5948
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg---------aacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||||||| || | ||||||| ||| ||||||||||||||         ||| |||||||||| || | | |||||||||||||||||    
T  6124 gtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatgcttcttatgaacctgcttctgatgactttatcacttcaggagcacttt 6025  T
Q  92 -gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccag 167  Q
     ||||||||||||||||| ||||||| | || ||| || ||||||||||||| ||||||||||| ||||||||||||    
T  6024 tgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 5948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 123; Significance: 2e-63; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 39611 - 39781
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagga 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |  |||||| |||||||||| ||||||||    
T  39611 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtcgttatgacttcaagagcactttgacttcagga 39710  T
Q  102 gcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39711 gcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 39781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 137671 - 137841
Alignment:
Q  2 tcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagga 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |  |||||| |||||||||| ||||||||    
T  137671 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtcgttatgacttcaagagcactttgacttcagga 137770  T
Q  102 gcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  137771 gcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 137841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 159310 - 159437
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |   | ||| ||||||||| ||||||| | || ||||||| || |||||||||    
T  159310 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-taaacatcatgagcacttc-cttcagatgcttcaagcttctttcttgttgatt 159407  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    || ||||||||  |||||||||||||||||    
T  159408 ccattgctctcatttgttcttccagaacct 159437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 120; Significance: 1e-61; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 44 - 191
Target Start/End: Complemental strand, 557 - 410
Alignment:
Q  44 cttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattc 143  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  557 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattc 458  T
Q  144 ctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  457 ctttgctctttattgttcttccaagacctttttaagatgtcaaatttt 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 1690 - 1494
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||    |||||| || |||||||||||||||| |||||| |||||||| |||||||||||||| | |||    
T  1690 ttgcatctcctgatgaactgtagcttctggtgaaacacagcttttggtgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttctgtagc 1591  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    | || |||||||||  ||||||||| |||||||||||||    ||||||| || |||||||||||  |||  |||||||| ||||| ||||| ||||    
T  1590 agttttcttcagacactttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagaccaatttaagatatcaaaattttgtctat 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 27355 - 27175
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||| ||||||||| ||  |||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||     
T  27355 gtcttgcatctcctgatgaacttcagcatctggtgatctt--gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactttgccttcaga 27258  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 183  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||    
T  27257 agcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttatttcagaacctatttaagatgt 27175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 143273 - 143487
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttc----------------agga 84  Q
    |||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||| | |||| ||||||                ||||    
T  143273 gtcttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatgaacttgcttctgatgatgtcagcacttcaggagcactttgcttcagga 143372  T
Q  85 gcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtc 184  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  143373 gcactttgtcttcaagagcagttttcttcagacgctttaagcttcctttttcttgattcctttgctctctattgttcttccagaacctttttaatatgtc 143472  T
Q  185 aaatttttgcctatg 199  Q
    ||||||||| |||||    
T  143473 aaatttttgtctatg 143487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 5562 - 5405
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||| || ||| |||||||| |||||||    
T  5562 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttcagacgcttcaaggttccttttagttgatt 5463  T
Q  143 cctttgctctc-tattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | ||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  5462 catttgctctcattttgttcttccagaacctatttaagatgtcaaatttttgtctatg 5405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 20841 - 20692
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||| |  ||||||||||||||||||||||||| || || |||||||||||||||||    
T  20841 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactattacttcaggagcacttctcttcagacgcttcaaacttcctttttgttgatt 20742  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  20741 ccttagctctcttttgttcttccagaacctatttaagatgtcaaattttt 20692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32670 - 32842
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||||||| |  || ||||||| || |||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||    
T  32670 gtcttgcatctcctgatgaactacaagttgtggtgatctttagcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttttgtcttcag 32769  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
     ||||||| ||||||||||  ||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  32770 aagcacttttcttcagacgccttaagcttcctttttgttgattcctttactctcttttgttcttctagaacct 32842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 49519 - 49688
Alignment:
Q  3 cttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcagga 101  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||  | ||||||||| | |||| ||||||||||||||||| ||||||| ||    
T  49519 cttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaagtcatcacttcaggagcacttttgtcttcaaga 49617  T
Q  102 gcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctt 173  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49618 gcacttctcttc-gacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagcacctt 49688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 269 - 205
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataa 68  Q
    |||||||| |||||||| || || |||||||||| | |||||||||||  |||||||||||||||    
T  269 ttgcatcttctgatgaagtacagtttctggtgatatacagcttctgatagacttgcttctgataa 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 18491 - 18341
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||||    
T  18491 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgatt 18392  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||| ||||||||||| |||||  | ||||| |||||||||||    
T  18391 cctttgctctcttttgttcttccaaaacctaataaagatatcaaatttttg 18341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 4873 - 4661
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagctt--------------ctgatgaacttgcttctgataacgtcaccacttcaggagc 86  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||              |||||||||||||||||||| || ||| ||||||||||||    
T  4873 gtcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcaggagc 4774  T
Q  87 actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 186  Q
    |||||| ||||||||||||||||||||||| | || || ||||||||||||||||||||||||||||| |||||||||||||||||| | | |||  |||    
T  4773 actttgacttcaggagcacttctcttcagatgcttcaaacttcctttttgttgattcctttgctctcttttgttcttccagaaccttataatgattccaa 4674  T
Q  187 atttttgcctatg 199  Q
    ||||||| |||||    
T  4673 atttttgtctatg 4661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 98; Significance: 2e-48; HSPs: 5)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 19216 - 19425
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagc-------------- 86  Q
    |||||| ||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||||| ||| ||| |||||||||||                  
T  19216 gtcttgtatcacctgatgaaatagagcttctggtgatcttcaacttctgataaacttgcttctgatgacgacacaacttcaggagcactttgtcttctag 19315  T
Q  87 ---actttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 183  Q
       ||||||| |||||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19316 agcactttgtgttcaggagcagttttcttcagatgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgt 19415  T
Q  184 caaatttttg 193  Q
    ||||||||||    
T  19416 caaatttttg 19425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 21987 - 21830
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgat 141  Q
    ||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||| |  ||||||||| ||||||||||| ||||||||||||    
T  21987 gcttctgatgaccttgcttctgatgacgtcatcacttcaggtgcactttgtcttcaggagcagtattcttcagacattttaagcttcactttttgttgat 21888  T
Q  142 tcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
       |||||||| || |||||||||||  ||||||||||||||||||||||||| ||||    
T  21887 gtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttttgtctat 21830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 9745 - 9849
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  |||||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||    
T  9745 ttgcatctcctgatgaactgcagcttctggtgattcacagcttatgatgaacttgcttctgatgacatcatcacttcatgagcactttgtcttcaggagc 9844  T
Q  104 acttc 108  Q
    |||||    
T  9845 acttc 9849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 22056 - 21994
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||| || |||||||| | ||||||||||||  ||||||||||| ||||||||||||||    
T  22056 ttgcatcttctaatgaactacaacttctggtgattcacagcttctgataaacttgcttctgat 21994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 9868 - 9953
Alignment:
Q  109 tcttcagacgttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||| |||| ||||||||||| |||||||||||    ||||||| |||| |||||||||  ||||||||||||||||||||||||    
T  9868 tcttctgacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagacctttttaagatgtcaaattttt 9953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 13818 - 13981
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcact 106  Q
    |||||||||||| ||  ||||||||||||| ||  |||||||||||||||||||||||| || |||  |||||||||||||||| |||||||||||||||    
T  13818 atctcctgatgagctttagcttctggtgatctt--gcttctgatgaacttgcttctgatgacatcattacttcaggagcacttttgtcttcaggagcact 13915  T
Q  107 tctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  13916 tctcttctgacgcattaagcttccttttcgttgattcctttgctctcttttgttcttccagaacct 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 192
Target Start/End: Original strand, 1866 - 2020
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgt 137  Q
    ||||||||||| ||| |||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||||||||| |    
T  1866 ttcagcttctggtgatcttgcttctgatgacgtcatcacttcaggagcattttagtcttcaggagcacttctctgcagatgctttaagcttcctttttat 1965  T
Q  138 tgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||||||||||||||| |||||||||||| |||| |||||| || |||||||||    
T  1966 tgattcctttgctctcttttgttcttccaggacctatttaagttgccaaattttt 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 8135 - 8293
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttga 140  Q
    |||||||| | | |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||    
T  8135 agcttctggttatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttactttttgttga 8234  T
Q  141 ttcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||| |||||||||||||||||  | | ||| ||||||||||| |||||    
T  8235 ttcctttgctctcttttgttcttccagaacctaataatgatatcaaatttttgtctatg 8293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 60255 - 60412
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||| |||||||||| |||||| |||||| ||| ||||||||||||| ||||||| ||||| |||||||||||||  ||||||||| |||||||||||    
T  60255 gcttctaatgaacttgcatctgatgacgtcatcacatcaggagcacttttgtcttcaagagcatttctcttcagacgccttaagcttcatttttgttgat 60354  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||||||||||| |||||||||||||||||  | | ||||||||||||||| |||||    
T  60355 tcctttgctctcttttgttcttccagaacctaataatgatgtcaaatttttgtctatg 60412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 115760 - 115889
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| ||||||||| |||| |||||| |||||||||||||||||| ||||||||| || |||||| |||   ||  |||||||||||||||||||    
T  115760 gcttctgataaacttgcttttgatgacgtcatcacttcaggagcactttgacttcaggagaacatctctttagattcttctagcttcctttttgttgatt 115859  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    | |  ||||||| || |||||| |||||||    
T  115860 cgtcagctctcttttattcttcgagaacct 115889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 151760 - 151714
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcact 89  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  151760 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 10034 - 10190
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||||| |||||| |||| ||||||||||| | || ||||||||||||||||||||    
T  10034 gcttctgattaacttgcttctgatgacgtcatcacttcaggagcactttgacttcagaagcatttctcttcagatgcttcaagcttcctttttgttgatt 10133  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || || |||||| |||||||| |||||||| || ||||| ||||||||||| |||||    
T  10134 ccattcctctcttttgttctttcagaacctattgaagatatcaaatttttgtctatg 10190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 1943 - 2071
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||| |||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  1943 agcttctgatgaccttgcttctgatgacgtcatcacttcatgagcactttgacttcaggagcacttctcttcagacactttaagcttcatttttgttgat 2042  T
Q  142 tcctttgctctctattgttcttccagaac 170  Q
    ||||| ||||||| |||||||||||||||    
T  2043 tccttcgctctcttttgttcttccagaac 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 515 - 332
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc---------------- 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||                     
T  515 agcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttaaggagcactttgtcttcagaagcactttgccttcaggagcagtt 416  T
Q  109 -tcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
     |||||||||| |||||||||||||||| ||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||    
T  415 ttcttcagacgctttaagcttcctttttattgattcatttgctctttgttgttcttccaaaacctttttaagatgtcaaatttt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 23488 - 23350
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||    
T  23488 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttttgatgacgttatcacttcaggagcactttgtcttcaggagc 23389  T
Q  104 acttctcttcagacgttttaagctt-cctttttgttgat 141  Q
    | || |||||||||| ||||||||| |||||||||||||    
T  23388 agttttcttcagacgctttaagcttccctttttgttgat 23350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 103757 - 103947
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||||||  |||||||||||   ||  |||||||||||  |  |||||||| |||||| ||||| || |||||||| ||||||||    
T  103757 gtcttgcatctcctgatgaacttcagcttctggtgtcctt--gcttctgatgagata-cttctgatgacgtcatcactttagtagcacttttgtcttcag 103853  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||| |||||||||||| | || ||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  103854 gagcgcttctcttcagatgcttcaagcttcctatttgttgattcatttgctctcttttgttctttcagaacctttttaagatgtcaaatttttg 103947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 716 - 845
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||| |||||||||||||| |||||| ||||||| ||||| |||| ||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  716 gcttctgataaacttgcttctgatgacgtcatcacttcatgagcattttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgatt 815  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    |||||||||||| ||||| |||||||||||    
T  816 cctttgctctcttttgtttttccagaacct 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 660 - 712
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  660 gtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatga 712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 78290 - 78086
Alignment:
Q  5 tgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    |||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  78290 tgcatctcatgatgaactacagcttctggtgattctcagattctgatgaacttgcttctgatgacatcatcacttcaggagcactttgtcttcaggagca 78191  T
Q  105 c-----------------ttctcttcagacgttttaagc-ttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 186  Q
    |                 || |||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||  | ||||||||||||||||    
T  78190 ctatatcttcaggagcagttttcttcagacgctttaatctttcctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaa 78091  T
Q  187 atttt 191  Q
    |||||    
T  78090 atttt 78086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 14901 - 15031
Alignment:
Q  42 agcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||| |||||||||||| |||||  ||||||| |||||||||| ||| ||||||||||||||||||||  |||||||||| |||||||||||    
T  14901 agcttctgatgaccttgcttctgatgacgtcgtcacttcatgagcactttgacttaaggagcacttctcttcagacactttaagcttcatttttgttgat 15000  T
Q  142 tcctttgctctctattgttcttccagaacct 172  Q
    ||||| ||||||| |||||||||||||||||    
T  15001 tccttcgctctcttttgttcttccagaacct 15031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 82; Significance: 6e-39; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 12450 - 12607
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttg-tcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||||||  |||||||||| |||| | |||| | | || |||||||||||||||||||    
T  12450 gcttctgatgaacttgcttctgatgacgtcatcagctcaggagcacttttatcttcaggagaacttttattcaaatgcttcaagcttcctttttgttgat 12549  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||| || |||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  12550 tccattactctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatg 12607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 12402 - 12430
Alignment:
Q  9 tctcctgatgaactagagcttctggtgat 37  Q
    |||||||||||||||||||||||||||||    
T  12402 tctcctgatgaactagagcttctggtgat 12430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 35403 - 35578
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| |||||||| |  ||||||| ||||| | |||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  35403 ttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagc 35502  T
Q  104 acttc---tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||    ||||||| | |||| ||||| ||||||||||||||||||||||||| |||||||||||  |||||||    
T  35503 acttcaaaacttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacctttt 35578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 82; Significance: 6e-39; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 19344 - 19188
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgat 141  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| ||| ||||||||||||||||||||||||| || |||||||| ||||||||||     
T  19344 gcttctgatgaacttgcttctgatgacgttatcacttcaggagcac-ttgacttcaggagcacttctcttcagacgcttcaagcttccttttttgttgac 19246  T
Q  142 tcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    ||||| ||||||| ||||||||||| |||||  | ||||| ||||||||||| |||||    
T  19245 tccttagctctcttttgttcttccataacctaataaagatatcaaatttttgtctatg 19188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 99013 - 98896
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttc-ctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| ||||  ||| ||||||| || |||||||| | |||||||||| |||||||| |||   |||||||| || |||||||||||  ||||||    
T  99013 cttcaggagcgctttaactttaggagcagttttcttcagaagctttaagcttcactttttgtcgatgtatttgctctttacttgttcttccaagaccttt 98914  T
Q  175 ttaagatgtcaaattttt 192  Q
    ||||||||||||||||||    
T  98913 ttaagatgtcaaattttt 98896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 99059 - 99004
Alignment:
Q  48 tgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  99059 tgatgaccttgcttctgatgacgtcattacttcaggagcactttgtcttcaggagc 99004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 99126 - 99071
Alignment:
Q  11 tcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    ||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  99126 tcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgat 99071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 5865 - 5674
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    |||||||||||||| |||||||  ||||||||||||| || |||||||||||||||| |||||||  ||||||  |||| || |||||||   ||||| |    
T  5865 gtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatgaacttacttctgaagacgtcattactttagaagcacttca-cttcatg 5767  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||| |||||||| | || || ||||||||||||||||||||| ||||||| |||||||||||||||||  | ||||| |||||||||||    
T  5766 agcacttttcttcagatgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttg 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 36645 - 36490
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||| |  ||| |||| |||||||||||||| | || ||||||||||||  ||||||    
T  36645 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactata-ctttaggatcacttctcttcagatgcttcaagcttccttttatttgatt 36547  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  36546 ccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatg 36490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 199
Target Start/End: Original strand, 42360 - 42515
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||| |  ||| |||| |||||||||||||| | || ||||||||||||  ||||||    
T  42360 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactata-ctttaggatcacttctcttcagatgcttcaagcttccttttatttgatt 42458  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    || ||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  42459 ccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatg 42515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 15323 - 15476
Alignment:
Q  39 ttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgtt 138  Q
    |||| |||||| ||| |||||||||||| |||||| |||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||    
T  15323 ttcatcttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt-gacttcaggagcacttctcttcagacgctttaagcttcctttttgtt 15421  T
Q  139 gattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||| ||||||| ||||||||  |||||||  | ||||| |||| ||||||    
T  15422 gattccttagctctcttttgttcttaaagaacctaataaagatatcaagtttttg 15476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 658 - 553
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgat 141  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  658 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacactttaagcttcctttttgttgat 559  T
Q  142 tccttt 147  Q
    ||||||    
T  558 tccttt 553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 712 - 676
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgat 37  Q
    ||||||||||||||||||||||  |||||||||||||    
T  712 gtcttgcatctcctgatgaactttagcttctggtgat 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 2637 - 2447
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt-tgtcttcaggag 102  Q
    |||||| ||||||||||||  || |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||  | |||||| ||    
T  2637 ttgcatttcctgatgaactgcagtttctggtgatttacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcagaag 2538  T
Q  103 cacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    || || |||||||||| ||||| ||| |||||||||||||    ||||||| || |||||||||||  |||  ||||||||||||||||||    
T  2537 cagttttcttcagacgctttaatcttccctttttgttgatgtacttgctctatatttgttcttccaagaccaatttaagatgtcaaatttt 2447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 60795 - 60599
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||| ||||||||||  ||||| ||||||| |||||||||| ||||  | ||||||||| |||||  |||||||||||||||    |||||||    
T  60795 gtcttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatgagat-gcttctgatgacgtcctcacttcaggagcactaaa-cttcagg 60698  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||  || || ||||| ||||||||  | ||||| ||||||||||| |||||    
T  60697 agcacttctcttcagacgcttcaagcttcctttttgttgattccttagcttcctttttttctttcagaacctaataaagatatcaaatttttgtctatg 60599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 22952 - 23057
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||| | ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22952 cttcaggagtagttctcttcagacgctttaagcttcatttttgttgattcttttgctctctattgttcttccaagacctttttaagatgtcaaatttttg 23051  T
Q  194 cctatg 199  Q
     |||||    
T  23052 tctatg 23057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22861 - 22924
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctg 64  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  22861 gtcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 9213 - 9098
Alignment:
Q  76 acttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||| ||||||| || |||||||| |||||||||||||||| || |||||||||||| |||||||| |||||||||| ||||||||||||||||| ||    
T  9213 acttcaagagcactgtgacttcaggatcacttctcttcagacgcttcaagcttcctttt-gttgattcatttgctctcttttgttcttccagaacctatt 9115  T
Q  176 taagatgtcaaattttt 192  Q
    |||||||||||||||||    
T  9114 taagatgtcaaattttt 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9332 - 9282
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||  ||||||||||||| ||  |||||||||||    
T  9332 gtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatga 9282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 6197 - 6359
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||| ||||||||||  | ||||| ||||| ||  |||||||||||||||||||||||| |||||| |||||||||| ||||| | |||||||||||||    
T  6197 catcttctgatgaacttcaacttctagtgatatt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggaacactt-gacttcaggagcact 6293  T
Q  107 tctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    | |||||||| | || |||||||||| ||||||||||| ||||||||  ||||||||| |||||||    
T  6294 tttcttcagatgcttcaagcttccttcttgttgattccattgctctcatttgttcttctagaacct 6359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 10033 - 9858
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcagg 100  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||               ||||| ||||||||||||||| |  |||||||    
T  10033 gtcttgcatctcctgatgaacttcagcttctggtgattttcagtttctgatga---------------cgtcatcacttcaggagcactata-cttcagg 9950  T
Q  101 agcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    |||||||||||||| |   || |||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  9949 agcacttctcttcatattcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaa-ctatttaagatgtcaaatttttg 9858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 17696 - 17596
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||||||||| |  ||||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  17696 atctcctgatgaattgaagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggatcactttgtcttcaggagcactt 17597  T
Q  108 c 108  Q
    |    
T  17596 c 17596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 34738 - 34634
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||||| |||||  ||||||| |||||   |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  34738 ttgcatctcctgaagaactgcagcttctagtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 34639  T
Q  104 acttc 108  Q
    |||||    
T  34638 acttc 34634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 25545 - 25480
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  25545 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc 25480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 36057 - 36013
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagca 87  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||    
T  36057 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagca 36013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 65354 - 65250
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| || ||| ||||||| |||||| ||||||||||||||    
T  65354 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacatcatcacttcaagagcacgttgtcttcaggagc 65255  T
Q  104 acttc 108  Q
    |||||    
T  65254 acttc 65250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 144399 - 144337
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  144399 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgat 144337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 135213 - 135107
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttt 191  Q
    ||||||||||| || |||||||||||||||||||| ||||||| |||||   |||||||| || |||||||||||  ||| ||| |||||| ||||||||    
T  135213 cttcaggagcagttttcttcagacgttttaagcttccctttttcttgatgtatttgctctttatttgttcttccaataccatttcaagatgccaaatttt 135114  T
Q  192 tgcctat 198  Q
    || ||||    
T  135113 tgtctat 135107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 65231 - 65140
Alignment:
Q  109 tcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| ||||||||| |||||||||||||   |||||||| || |||||||||||  ||| ||| |||||| |||||||||| ||||    
T  65231 tcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccatttcaagatgccaaatttttgtctat 65140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 1704 - 1589
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |  |||||||    
T  1704 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttctaagacctttt 1605  T
Q  176 taagatgtcaaatttt 191  Q
    |||||| |||||||||    
T  1604 taagatatcaaatttt 1589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 15980 - 16130
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt-gtcttcag 99  Q
    ||||||||||||||||||||||  |||||||| |||  |   | |||||||||||||||||||||| | |||| ||||||| ||||||||| | ||||||    
T  15980 gtcttgcatctcctgatgaactttagcttctgatgagat---ggttctgatgaacttgcttctgatgatgtcatcacttcatgagcacttttgacttcag 16076  T
Q  100 gagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctc 153  Q
    |||||| |||||||||| | || |||||||||||||||||||||||| ||||||    
T  16077 gagcacatctcttcagatgcttcaagcttcctttttgttgattccttagctctc 16130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 60989 - 61088
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||| | |||||||||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  60989 ttgcatctcctgatgaactacaacttctggtgattctcaacttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtctttaggagc 61088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 61111 - 61202
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctatt-gttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||| | |||||||| | ||||||||||||   |||||||| |||| |||||||||  ||||||||||||||||||||||||| ||||    
T  61111 tcttcagatgctttaagctccactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttttgtctat 61202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 1e-30; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 215317 - 215202
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||||  |||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||  | |||||    
T  215317 cttcaggagtgctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagatctttt 215218  T
Q  176 taagatgtcaaatttt 191  Q
    ||||||||||||||||    
T  215217 taagatgtcaaatttt 215202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 215422 - 215360
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||| ||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  215422 ttgcatctcctgataaactgcagcttctggtgattttcggcttctgataaacttgcttctgat 215360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 215368 - 215330
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttca 81  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  215368 gcttctgatgaacttgcttctgatgacgtctccacttca 215330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 6545 - 6423
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||||||||  |||  ||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  6545 cttcaggagcgttttaacttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 6446  T
Q  176 taagatgtcaaatttttgcctat 198  Q
    |||||| ||||||||||| ||||    
T  6445 taagatatcaaatttttgtctat 6423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 6665 - 6603
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  6665 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgat 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 6e-30; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 220478 - 220607
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| ||| |||||||||||||| |||||||||| || ||| ||||||||||||||||    
T  220478 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-ttgacttcaggagcacttttcttcagacgcttcaaggttcctttttgttgatt 220576  T
Q  143 cctttgctctcta-ttgttcttccagaacct 172  Q
    || | |||||| | |||||||| ||||||||    
T  220577 ccatagctctcaatttgttctttcagaacct 220607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 377395 - 377291
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttg 193  Q
    ||||||||||||| ||||||||||  ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||  | ||||| |||||||||||    
T  377395 cttcaggagcactactcttcagacactttaagcttccttttagttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttg 377296  T
Q  194 cctat 198  Q
     ||||    
T  377295 tctat 377291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 30689 - 30612
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  30689 cttcaggagcaatt-tcttcagacgtcttaagcttccattttgttgattcctttgctctcttttgttcttccagaacct 30612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 244118 - 243995
Alignment:
Q  48 tgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattccttt 147  Q
    |||||||||||||| |||| |||||| ||||||| |||||||| | |||||| | | ||| |||||||| | || |||||||||| ||||||||||| ||    
T  244118 tgatgaacttgcttttgatgacgtcatcacttcatgagcactt-gacttcagaacctcttttcttcagatgcttcaagcttccttcttgttgattccatt 244020  T
Q  148 gctctctattgttcttccagaacct 172  Q
    |||||   |||||||||||||||||    
T  244019 gctctaatttgttcttccagaacct 243995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 377485 - 377433
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  377485 gtcttgcatctcctgatgaactataacttctggtgatcttcagcttctgatga 377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 211639 - 211696
Alignment:
Q  46 tctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||| || ||||||||| || |||||| |||||||||||||||||||||||||||||    
T  211639 tctgaggaccttgcttctaatgacgtcatcacttcaggagcactttgtcttcaggagc 211696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 211687 - 211752
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgat 141  Q
    |||||||||| |||| |||||| ||||| || |||||||||  ||||||||| |||||||||||||    
T  211687 cttcaggagcgctttatcttcaagagcagttttcttcagactctttaagcttccctttttgttgat 211752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 30409 - 30585
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatg---------aacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||||||||||||||||||| || | ||||||| ||| ||||||||||||||         ||| |||||||||| || | | |||||||||||||||||    
T  30409 gtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatgcttcttatgaacctgcttctgatgactttatcacttcaggagcacttt 30508  T
Q  92 -gtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccag 167  Q
     ||||||||||||||||| ||||||| | || ||| || ||||||||||||| ||||||||||| ||||||||||||    
T  30509 tgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 30585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 9340 - 9439
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||  |||||  ||||||||||||||||||||||| ||||    
T  9340 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatggcgtcattacttcaggagcactttgtcttcatgagc 9439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 10228 - 10326
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaattttt 192  Q
    ||||||||||||||||||||||| | || ||||||||||||| ||||||| || | ||||| ||||||||||||||||| |||||||||||||||||||    
T  10228 cttcaggagcacttctcttcagatgcttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaattttt 10326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10154 - 10241
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactt 90  Q
    ||||||||||||||||||||||  | ||||| ||||| ||  |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  10154 gtcttgcatctcctgatgaacttcaacttcttgtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 4829 - 4751
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  4829 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctcccttttgttcttctagaacct 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 25811 - 25733
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  25811 cttcaggagcacttctcttcagacgccttaatcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25901 - 25849
Alignment:
Q  1 gtcttgcatctcctgatgaactagagcttctggtgattttcagcttctgatga 53  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  25901 gtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatga 25849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 11931 - 12035
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    |||||||| ||||||||||  ||||||||||||| | || ||| ||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  11931 ttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagc 12030  T
Q  104 acttc 108  Q
    |||||    
T  12031 acttc 12035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 12055 - 12112
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttcc 165  Q
    |||||||| | |||| ||||| |||||||||||||||||| |||||| ||||||||||    
T  12055 tcttcagatgctttaggcttctctttttgttgattcctttcctctcttttgttcttcc 12112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 5422 - 5307
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcc-tttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||| |||| |||| |||||||||||| || |||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||    
T  5422 cttcatgagcgctttatcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttt 5323  T
Q  176 taagatgtcaaatttt 191  Q
    ||| || |||||||||    
T  5322 taaaatatcaaatttt 5307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 5503 - 5462
Alignment:
Q  25 agcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||| |||||||||||| ||||||||||||||    
T  5503 agcttctggtgattctcagcttctgataaacttgcttctgat 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 14990 - 15065
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    ||||||||||| |||  ||||||||| |||||| |||||||| |||||||   ||||||||||| || ||||||||    
T  14990 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 15065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 58; Significance: 1e-24; HSPs: 4)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 57 - 158
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||| ||||||||||  ||||||||||||||  ||||  |||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  57 catcttctgatgaactgcagcttctggtgattcacagccactgatgtacgtgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcact 156  T
Q  107 tc 108  Q
    ||    
T  157 tc 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 8120 - 8221
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||| ||||||||||  ||||||||||||||  ||||  |||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  8120 catcttctgatgaactgcagcttctggtgattcacagccactgatgtacgtgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcact 8219  T
Q  107 tc 108  Q
    ||    
T  8220 tc 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 177 - 267
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| ||||||||||| ||||||||||   |||||||| || |||||||||||  ||| ||||||| ||||||||||||| ||||    
T  177 tcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaatttttgtctat 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 8240 - 8330
Alignment:
Q  109 tcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacctttttaagatgtcaaatttttgcctat 198  Q
    |||||||||| ||||||||||| ||||||||||   |||||||| || |||||||||||  ||| ||||||| ||||||||||||| ||||    
T  8240 tcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaatttttgtctat 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 3610 - 3733
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgattcctttgctctcta-ttgttcttccagaaccttt 174  Q
    |||||||||| |||| |||||||||||| || |||||||||  ||||||||| |||||||||||||   |||||||| || |||||||||||  ||||||    
T  3610 cttcaggagcgctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccttt 3709  T
Q  175 ttaagatgtcaaatttttgcctat 198  Q
    ||||||||||||||||||| ||||    
T  3710 ttaagatgtcaaatttttgtctat 3733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 3490 - 3552
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  3490 ttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgat 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 3559 - 3619
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagc 103  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  3559 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagc 3619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 7081 - 7016
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataac 69  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  7081 ttgcatctcctgatgaactacagcttctggtgattcacagcttctgatgaacttgcttctgataac 7016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 6976 - 6851
Alignment:
Q  77 cttcaggagcactttgt-cttcaggagcacttctcttcagacg-ttttaagcttcc-tttttgttgattcctttgctctctatt-gttcttccagaacct 172  Q
    |||||||||||||||   ||||||||||| || |||||||||| |||||||||||| |||||||||||   |||||||| |||| |||||||||  ||||    
T  6976 cttcaggagcacttttaacttcaggagcagttttcttcagacgcttttaagcttccctttttgttgatgtgtttgctctttatttgttcttccaagacct 6877  T
Q  173 ttttaagatgtcaaatttttgcctat 198  Q
    |||||||||||||||| |||| ||||    
T  6876 ttttaagatgtcaaatatttgtctat 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 7002 - 6963
Alignment:
Q  68 acgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  7002 acgtcatcacttcaggagcactttgtcttcaggagcactt 6963  T

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Target: scaffold0275 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 8511 - 8572
Alignment:
Q  46 tctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcactt 107  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  8511 tctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcactt 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 8559 - 8624
Alignment:
Q  77 cttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagctt-cctttttgttgat 141  Q
    |||||||||||||||  ||||||||||| || |||||||||  ||||||||| |||||||||||||    
T  8559 cttcaggagcactttaacttcaggagcagttttcttcagacactttaagcttccctttttgttgat 8624  T

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Target: scaffold0081 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 40886 - 41014
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||| ||| |||||||| || |||||||||||||||| ||| |  ||||| | ||||| |||||||| | || || |||||||||||||||||    
T  40886 gcttctgatgatcttacttctgatgacatcaccacttcaggagccctt-gagttcagaaccacttttcttcagatggttcaaacttcctttttgttgatt 40984  T
Q  143 cctttgctctctattgttcttccagaacct 172  Q
    || ||||||||  |||||||||||||||||    
T  40985 ccattgctctcatttgttcttccagaacct 41014  T

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Target: scaffold0177 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 20314 - 20213
Alignment:
Q  8 atctcctgatgaactagagcttctggtgattttcagcttctgatgaactt-gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    |||| ||||||||||  |||||||||||||   ||||||||||||||||| ||||||||| ||||||  |||||||  ||||||||||||||||||||||    
T  20314 atcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcattacttcagaggcactttgtcttcaggagcact 20215  T
Q  107 tc 108  Q
    ||    
T  20214 tc 20213  T

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Target: scaffold0016 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 938 - 1003
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  938 gcttatgatgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 1003  T

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Target: scaffold0395 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 13403 - 13248
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    ||||||||||||| ||||| | || || ||| |||||||||||||||   | |||||||||||||||||||||| | || ||||||| ||||||||||||    
T  13403 gcttctgatgaacatgcttttaatgacatcatcacttcaggagcactaaat-ttcaggagcacttctcttcagatgcttcaagcttcttttttgttgatt 13305  T
Q  143 cctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgcctatg 199  Q
    | || ||| ||| ||| | || ||||||||  | ||||| ||||||||||| |||||    
T  13304 ctttagctttcttttggtttttcagaacctaataaagatatcaaatttttgtctatg 13248  T

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Target: scaffold0064 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 43775 - 43652
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgatt 142  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||   |||||| | | ||| |||||||| | || |||||||||| ||| |||||    
T  43775 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagcacttgaacttcagaacctcttttcttcagatgcttcaagcttccttcttgctgatt 43676  T
Q  143 cctttgctctctattgttcttcca 166  Q
    || |||||||   |||||||||||    
T  43675 ccattgctctaatttgttcttcca 43652  T

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Target: scaffold0607 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 7195 - 7312
Alignment:
Q  83 gagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttg-ttgattcctttgctctctatt-gttcttccagaacctttttaaga 180  Q
    ||||||||||||||||| |||| || |||||||| | ||||||||||| ||||| |||||   |||||||  |||| |||||||||  ||||||||||||    
T  7195 gagcactttgtcttcagtagcagttttcttcagatgctttaagcttcccttttggttgatgtatttgctccttatttgttcttccaagacctttttaaga 7294  T
Q  181 tgtcaaatttttgcctat 198  Q
    ||||||||||||| ||||    
T  7295 tgtcaaatttttgtctat 7312  T

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Target: scaffold0151 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 11616 - 11681
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  11616 gcttctgatgaactagcttctgatgacgtcattacttcagaagcactttgtcttcaggagcacttc 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 87482 - 87417
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    |||| ||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  87482 gcttatgatgaactagcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 87417  T

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Target: scaffold0488 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 11387 - 11325
Alignment:
Q  129 cctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttt 191  Q
    |||||||||||||| ||||||||| |||||||||||||  ||||||||||||| |||||||||    
T  11387 cctttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaatttt 11325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 752 - 651
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcact 106  Q
    ||||||||||||||||  || |||||||||    ||||||||||||||||||||||| || |||||| |||| ||| |||  ||||||||| ||||||||    
T  752 catctcctgatgaactgcagtttctggtgaaacacagcttctgatgaacttgcttctaatgacgtcatcactacagaagccatttgtcttccggagcact 653  T
Q  107 tc 108  Q
    ||    
T  652 tc 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 1360 - 1246
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctat 156  Q
    |||||||||| || ||| ||||| |||||||||| |||||||| | | ||| |||||||| | || |||||||||| |||||||||   ||||||||  |    
T  1360 tgcttctgatgacatcaacacttaaggagcactt-gtcttcagaacctcttttcttcagatgcttcaagcttccttcttgttgattatgttgctctcatt 1262  T
Q  157 tgttcttccagaacct 172  Q
    ||||||||||||||||    
T  1261 tgttcttccagaacct 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 5219 - 5169
Alignment:
Q  58 gcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  5219 gcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc 5169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 74821 - 74869
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcacttt 91  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  74821 gcttatgatgaacttgcttctgatgacgtcaacacttcaggagcacttt 74869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 74855 - 74933
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 172  Q
    |||||||||||||| |||||||| | || || ||| ||| |||||||||||  |||||||  |||||||||||||||||    
T  74855 cttcaggagcacttttcttcagatgcttcaacctttcttcttgttgattccactgctctcgtttgttcttccagaacct 74933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 1603 - 1540
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaac-ttgcttctgat 66  Q
    |||||||| ||||||||||| |||||||||||||   ||||||||||||||| |||||||||||    
T  1603 ttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgat 1540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 7561 - 7620
Alignment:
Q  7 catctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgat 66  Q
    |||||| |||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  7561 catctcttgatgaactaaagcttctggtgatacatagcttctgatgaacttgcttctgat 7620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 7612 - 7677
Alignment:
Q  43 gcttctgatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttc 108  Q
    ||||||||||||||  |||||||||||||||  ||||| |  |||||||||||||| |||||||||    
T  7612 gcttctgatgaactaacttctgataacgtcattacttcggaggcactttgtcttcaagagcacttc 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 10229 - 10308
Alignment:
Q  94 cttcaggagcacttctcttcagacgttttaagcttcctttttgttgattcctttgctctcta-ttgttcttccagaacct 172  Q
    |||||||||||||| |||||||||| || |||||||||||||||| ||||| | |||||  | || ||||||||||||||    
T  10229 cttcaggagcacttttcttcagacgcttcaagcttcctttttgtttattccatagctcttaattttttcttccagaacct 10308  T

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Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 38009 - 37946
Alignment:
Q  4 ttgcatctcctgatgaactagagcttctggtgattttcagcttctgatgaacttgcttctgata 67  Q
    |||||||||||||||||||| || |||||||||| | ||||||| |||||| | ||||||||||    
T  38009 ttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaaatagcttctgata 37946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 3653 - 3608
Alignment:
Q  130 ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||    
T  3653 ctttttgttgattcctttgctctcttttgttcttccaagacctttt 3608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 8714 - 8655
Alignment:
Q  57 tgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcacttctcttcaga 116  Q
    |||||||||| |||||| | ||||||||||| |||| ||||||||||| || ||||||||    
T  8714 tgcttctgatgacgtcatctcttcaggagcagtttggcttcaggagcagttttcttcaga 8655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 5462 - 5494
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  5462 ttgttgattcctttgctctcttttgttcttcca 5494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 7615 - 7682
Alignment:
Q  109 tcttcagacgttttaagcttc-ctttttgttgattcctttgctctctattgttcttccagaacctttt 175  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||| || ||||||||  |||||||    
T  7615 tcttcagatgctttaggcttctctttttgttgattcctttgctctctttttttcttccaagacctttt 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 17318 - 17352
Alignment:
Q  130 ctttttgttgattcctttgctctctattgttcttc 164  Q
    ||||||||||||||||||||||||| |||||||||    
T  17318 ctttttgttgattcctttgctctcttttgttcttc 17352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 6280 - 6246
Alignment:
Q  132 ttttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||||| |||||||||||    
T  6280 ttttgttgattcctttgctctcttttgttcttcca 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 3205 - 3268
Alignment:
Q  43 gcttctgatgaactt--gcttctgataacgtcaccacttcaggagcactttgtcttcaggagca 104  Q
    |||||||||||||||  ||||||||| |||||| |||||||| |||||||   |||||||||||    
T  3205 gcttctgatgaacttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 3268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 17564 - 17532
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  17564 ttgttgattcctttgctctcttttgttcttcca 17532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 9649 - 9681
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  9649 ttgttgattcctttgctctcttttgttcttcca 9681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 156392 - 156360
Alignment:
Q  134 ttgttgattcctttgctctctattgttcttcca 166  Q
    ||||||||||||||||||||| |||||||||||    
T  156392 ttgttgattcctttgctctcttttgttcttcca 156360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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