View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16965_low_4 (Length: 514)
Name: NF16965_low_4
Description: NF16965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16965_low_4 |
 | |
|
| [»] scaffold1079 (2 HSPs) |
| | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 482; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 7 - 504
Target Start/End: Original strand, 16899113 - 16899610
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16899113 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcctttac |
16899212 |
T |
|
| Q |
107 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttagt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16899213 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttatt |
16899312 |
T |
|
| Q |
207 |
taagttcttttctaagaggtggaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899313 |
taagttcttttctaagaggtagaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
16899412 |
T |
|
| Q |
307 |
accctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
406 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899413 |
accatttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
16899512 |
T |
|
| Q |
407 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttccctatg |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899513 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttccctatg |
16899610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 7 - 504
Target Start/End: Original strand, 18347628 - 18348125
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
18347628 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcctttac |
18347727 |
T |
|
| Q |
107 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttagt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18347728 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttatt |
18347827 |
T |
|
| Q |
207 |
taagttcttttctaagaggtggaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347828 |
taagttcttttctaagaggtagaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
18347927 |
T |
|
| Q |
307 |
accctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347928 |
accctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
18348027 |
T |
|
| Q |
407 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttccctatg |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
18348028 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcattttttattccattcataaatctattttcttccctatg |
18348125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 51701385 - 51701450
Alignment:
| Q |
68 |
gccctgcggtaatgattcctctggcattacggcccttaccacaatgatgctgtccataaatcaaac |
133 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||| ||||||| | |||||||||||||||| |
|
|
| T |
51701385 |
gccctgcggtaaagattcctctggcattacggcctttaacacaatgtcgttgtccataaatcaaac |
51701450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 51701179 - 51701232
Alignment:
| Q |
22 |
cgaaaatcaattttacggtatagacgcttatgacct-ccccctctatgccctgc |
74 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| || ||||||||||||||||| |
|
|
| T |
51701179 |
cgaaaatcaattttacagtatagacacttatgatctcccccctctatgccctgc |
51701232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 7 - 504
Target Start/End: Complemental strand, 13236863 - 13236366
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13236863 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcctttac |
13236764 |
T |
|
| Q |
107 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttagt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13236763 |
cacaatgatgctgtccataaatcaaacgatttcgtgtgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttatt |
13236664 |
T |
|
| Q |
207 |
taagttcttttctaagaggtggaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236663 |
taagttcttttctaagaggtagaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttct |
13236564 |
T |
|
| Q |
307 |
accctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236563 |
accctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcg |
13236464 |
T |
|
| Q |
407 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttccctatg |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236463 |
acattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcattttttattccattcataaatctattttcttccctatg |
13236366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1079 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: scaffold1079
Description:
Target: scaffold1079; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 143 - 504
Target Start/End: Original strand, 254 - 617
Alignment:
| Q |
143 |
tgcgggtgctcgggatagaagttttgtataaatgtatcgccatgctattaagtgtatttttagttaagttcttttc----taagaggtggaatagaataa |
238 |
Q |
| |
|
|||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||| |
|
|
| T |
254 |
tgcgtgtgcccggggtagaagttttgtataaatgtatcgccatgctattaagt--attttgatttaagttcttttcgttgtaagaggtggaatagaataa |
351 |
T |
|
| Q |
239 |
cccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttctaccctttattgggagtcgatgactattcatag |
338 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
352 |
cccggttgaagcgtaatgatcatacgcctgtaatgcattgtatgtcccataataggtcccattcttctaccctttcgggggagtcgatgactattcatag |
451 |
T |
|
| Q |
339 |
ctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcgacattaaaagtatattgattttttcccaataa |
438 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
|
|
| T |
452 |
ctattaccttgacaccaaagaagagttcgacccaatgctttatttctgtcctagttgatcctgattcgacattagaagtatattgatttttcaccactaa |
551 |
T |
|
| Q |
439 |
ccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttccctatg |
504 |
Q |
| |
|
|||||||||||||||||||| || | |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
552 |
ccgaatacttttgtctgtaactactatatatttgattccatccataaatctattttcttccctatg |
617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1079; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 85 - 220
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||| |
|
|
| T |
85 |
tctttttcatttcgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccttgcggtaatgattcctctggcattacgacctttac |
184 |
T |
|
| Q |
107 |
cacaatgatgctgtccataaatcaaacgatttcgtg |
142 |
Q |
| |
|
||||| ||||||||||||| |||||| |||||||| |
|
|
| T |
185 |
cacaacgatgctgtccatagatcaaattatttcgtg |
220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 168; Significance: 8e-90; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 304 - 504
Target Start/End: Original strand, 10403965 - 10404169
Alignment:
| Q |
304 |
tctaccctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctg-- |
401 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10403965 |
tctaccctttattgggagtcgatgactattcatagctattaccttgacaccaaataagagttcgacccaatgttttatttctgtcctagttgatactgat |
10404064 |
T |
|
| Q |
402 |
--attcgacattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttcc |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10404065 |
taattcgacattaaaagtatattgattttttcccaataaccgaatacttttgtttgtaaatattatatattttattccattcataaatctattttcttcc |
10404164 |
T |
|
| Q |
500 |
ctatg |
504 |
Q |
| |
|
||||| |
|
|
| T |
10404165 |
ctatg |
10404169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 379 - 504
Target Start/End: Complemental strand, 6352464 - 6352341
Alignment:
| Q |
379 |
tatttctgtcctagttgatcctgattcgacattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattcca |
478 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6352464 |
tatttctgtcctagttgatcct-attcgacattaaaagtatattgattttttcccaataat-gaatacttttgtctgtaaatattacatattttattcca |
6352367 |
T |
|
| Q |
479 |
ttcataaatctattttcttccctatg |
504 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
6352366 |
ttcataaatctattttcttccctatg |
6352341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 299 - 504
Target Start/End: Complemental strand, 42203482 - 42203278
Alignment:
| Q |
299 |
attcttctaccctttattgggagtcgatgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatc |
398 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
42203482 |
attcttttatcctttattgggagtcgatgactattcatagctattaccttgacatcaaagaagagttcgacccaatgttttatttctatcctagttgatc |
42203383 |
T |
|
| Q |
399 |
ctgattcgacattaaaagtatattgattttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatctattttcttc |
498 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
42203382 |
ctgattcgacattaaaagtatattgaattttt-acaataaccgaacacttttgtctgtaaatattgcatatattattccattcataaatctatttttttc |
42203284 |
T |
|
| Q |
499 |
cctatg |
504 |
Q |
| |
|
| |||| |
|
|
| T |
42203283 |
catatg |
42203278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 23053569 - 23053450
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| |
|
|
| T |
23053569 |
tctttttcattccgtagaaaatcaattttacggtatagacgcttatgacctctccctctatgccctgtggtaacgattcctctggcattacagcctttac |
23053470 |
T |
|
| Q |
107 |
cacaatgatgctgtccataa |
126 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
23053469 |
cacagtgatgctgtccataa |
23053450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 225 - 488
Target Start/End: Complemental strand, 198128 - 197865
Alignment:
| Q |
225 |
gtggaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttctaccctttattgggagtcg |
324 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |||||||| | |||| |||| |||||||| ||||||||||| ||| || ||||| |
|
|
| T |
198128 |
gtggaatagaataacccggttgaagggtaatgatcatacgtctgtaatgcattgtatggcccagaataggtcctattcttctaccttttccaggtagtcg |
198029 |
T |
|
| Q |
325 |
atgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcgacattaaaagtatattga |
424 |
Q |
| |
|
||| ||||||| ||||| ||||| |||||||| ||||||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||| |
|
|
| T |
198028 |
atggctattcacagctaccaccttaacaccaaagaagagttcgacccaatgctttatttctgtcttagtgaatcccgattcgacattaaaagtatattga |
197929 |
T |
|
| Q |
425 |
ttttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccattcataaatc |
488 |
Q |
| |
|
|| ||||||||||| |||| |||||| |||||||||| ||| ||||| ||||||| |||||||| |
|
|
| T |
197928 |
ttctttcccaataaacgaagacttttttctgtaaatactgcgtatttgattccatccataaatc |
197865 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 480
Target Start/End: Complemental strand, 256562 - 256308
Alignment:
| Q |
225 |
gtggaatagaataacccggttgaagcgtaatgatcatacgtttgtaatgcggtctatgtcccataataggtcgcattcttctaccctttattgggagtcg |
324 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |||||||| | || | |||| |||||||| ||||||||||| ||| || ||||| |
|
|
| T |
256562 |
gtggaatagaataacccggttgaagggtaatgatcatacgtctgtaatgcattgtacggcccagaataggtcctattcttctaccttttccaggtagtcg |
256463 |
T |
|
| Q |
325 |
atgactattcatagctattaccttgacaccaaaaaagagttcgacccaatgttttatttctgtcctagttgatcctgattcgacattaaaagtatattga |
424 |
Q |
| |
|
||| ||||||| ||||| ||||| | ||||| ||||||| || |||||| |||||||||||| |||| |||| |||||||||||||||||||||||| |
|
|
| T |
256462 |
atggctattcacagctaccaccttaat-ccaaagaagagtttgaaccaatgctttatttctgtcttagtgaatcccgattcgacattaaaagtatattga |
256364 |
T |
|
| Q |
425 |
ttttttcccaataaccgaatacttttgtctgtaaatattgcatattttattccatt |
480 |
Q |
| |
|
|| ||||||||||| |||| |||||| |||||||||| ||| ||||| |||||||| |
|
|
| T |
256363 |
ttctttcccaataaacgaagacttttttctgtaaatactgcgtatttgattccatt |
256308 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 198381 - 198246
Alignment:
| Q |
7 |
tctttttcattacgtcgaaaatcaattttacggtatagacgcttatgacctccccctctatgccctgcggtaatgattcctctggcattacggcccttac |
106 |
Q |
| |
|
||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||| |
|
|
| T |
198381 |
tctttttgattccgtcgaaaatctattttacggtataggcgcttatgacctccccctctatgccatgcggtaatgattcctctggaattacgacctttac |
198282 |
T |
|
| Q |
107 |
cacaatgatgctgtccataaatcaaacgatttcgtg |
142 |
Q |
| |
|
||||| | ||| |||||| |||||| |||||||| |
|
|
| T |
198281 |
cacaacggtgccgtccatggatcaaattatttcgtg |
198246 |
T |
|
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Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 40231035 - 40230933
Alignment:
| Q |
400 |
tgattcgacattaaaagtatattgatttttt-cccaataaccgaatacttttgtctgt-aaatattgcatattttattccattcataaatctattttctt |
497 |
Q |
| |
|
||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||| | ||||| ||||||| ||| | ||| |||||||||||||| |
|
|
| T |
40231035 |
tgattcgacgttaaaagtgtattgatttttttcccaataaccaaatacttttgtctataaaataccacatatttcattgaactcacaaatctattttctt |
40230936 |
T |
|
| Q |
498 |
ccc |
500 |
Q |
| |
|
||| |
|
|
| T |
40230935 |
ccc |
40230933 |
T |
|
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