View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16967_high_26 (Length: 313)
Name: NF16967_high_26
Description: NF16967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16967_high_26 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 37903374 - 37903667
Alignment:
| Q |
1 |
tattaccttgataaacaaacaactaaattatcattccaaagaagaaatgacagaaaattaaatgtgaacatattgtagcactgtgctacaaagagcaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
37903374 |
tattaccttgataaacaaacaactaaattatcattccaaagaagaaatgacagaaaattaaatgtgaacatattgtagtactgtgctgcaaagagcaaat |
37903473 |
T |
|
| Q |
101 |
gaacgtacttgagcgttgaaatgtccatcatgcagtttttgaaaaccaccagccttaattataaccgcaacattgtcctgtcatacaaagcagttatgtc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37903474 |
gaacgtacttgagcgttgaaatgtccatcatgcagtttttgaaaaccaccagccttaattataaccgcaacattgtcctgtcatacaaagcagttatgtc |
37903573 |
T |
|
| Q |
201 |
agaggcagcatatcaccaggcatcaatgattaataaagggccacatactatgctgaacgagtaaaaaacaaggaaactaacttcacctcattat |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37903574 |
agaggcagcatatcaccaggcatcaatgattaataaagggccacatactatgctgaacgagtaaaaaacaaggaaactaacttcacctcattat |
37903667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 37909885 - 37910178
Alignment:
| Q |
1 |
tattaccttgataaacaaacaactaaattatcattccaaagaagaaatgacagaaaattaaatgtgaacatattgtagcactgtgctacaaagagcaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
37909885 |
tattaccttgataaacaaacaactaaattatcattccaaagaagaaatgacagaaaattaaatgtgaacatattgtagtactgtgctgcaaagagcaaat |
37909984 |
T |
|
| Q |
101 |
gaacgtacttgagcgttgaaatgtccatcatgcagtttttgaaaaccaccagccttaattataaccgcaacattgtcctgtcatacaaagcagttatgtc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37909985 |
gaacgtacttgagcgttgaaatgtccatcatgcagtttttgaaaaccaccagccttaattataaccgcaacattgtcctgtcatacaaagcagttatgtc |
37910084 |
T |
|
| Q |
201 |
agaggcagcatatcaccaggcatcaatgattaataaagggccacatactatgctgaacgagtaaaaaacaaggaaactaacttcacctcattat |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37910085 |
agaggcagcatatcaccaggcatcaatgattaataaagggccacatactatgctgaacgagtaaaaaacaaggaaactaacttcacctcattat |
37910178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University