View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16967_low_37 (Length: 266)
Name: NF16967_low_37
Description: NF16967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16967_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 11333810 - 11333574
Alignment:
| Q |
18 |
gttggtgaggaaagcaatgaggaggaagaggaatgatgaagagagtgaagagagatgggtgagttattcagaagttgttgaagagaccaagaaggaaatt |
117 |
Q |
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| T |
11333810 |
gttggtgaggaaagcaatgaggaggaagaggaatgatgaagagagtgaagagagatgggtgagttattcagaagttgttgaagaaacgaagaaggaaatt |
11333711 |
T |
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| Q |
118 |
atggaggaagttaatagtacttgttttggatttgaaacgacgtcgttttttgggtctttgagtttgaagttggatcatgatgggatattgaatgcttggt |
217 |
Q |
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| T |
11333710 |
atggaggaagttaatagtacttgttttggatttgaaacgacgtcgttttttgggtctttgagtttgaagttggatcatgatgggatattgaatgcttggt |
11333611 |
T |
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| Q |
218 |
ctgataaaggttctctttatgttgatggttgtgatga |
254 |
Q |
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| T |
11333610 |
ctgataaaggttctctttatgttgatggttgtgatga |
11333574 |
T |
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