View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16968_low_6 (Length: 228)
Name: NF16968_low_6
Description: NF16968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16968_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 11438695 - 11438845
Alignment:
| Q |
69 |
tcggcagacatgctacgaatccttaacccaatcagccaagggatccacacgacccaccgacccaaaaccaggaaccagatcgaacaacatcctcaagaga |
168 |
Q |
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| T |
11438695 |
tcggcagacatgctacgaatccttaacccaaccagccaagggatccacacgatccaccgacccaaaaccaggaactagatcgaacaacatcctcaagaga |
11438794 |
T |
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| Q |
169 |
tcaacaacatgctgaaacaagaagaagaagttacaacatttctctgctcct |
219 |
Q |
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||||||||||| |||||||||||||||||||||||||| |||||||||||| |
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| T |
11438795 |
tcaacaacatgttgaaacaagaagaagaagttacaacacttctctgctcct |
11438845 |
T |
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