View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16969_high_2 (Length: 561)

Name: NF16969_high_2
Description: NF16969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16969_high_2
NF16969_high_2
[»] chr5 (21 HSPs)
chr5 (10-263)||(13482913-13483162)
chr5 (290-407)||(13482767-13482884)
chr5 (456-561)||(13482611-13482716)
chr5 (50-134)||(28591131-28591215)
chr5 (43-126)||(16611758-16611841)
chr5 (50-148)||(546053-546151)
chr5 (50-124)||(8074483-8074557)
chr5 (63-151)||(18400194-18400283)
chr5 (50-134)||(8075850-8075934)
chr5 (38-106)||(9538054-9538122)
chr5 (50-134)||(25590453-25590536)
chr5 (50-129)||(4592888-4592967)
chr5 (43-104)||(2464721-2464782)
chr5 (38-95)||(18004699-18004756)
chr5 (50-134)||(2466791-2466875)
chr5 (50-126)||(19182980-19183056)
chr5 (78-133)||(9537046-9537101)
chr5 (50-117)||(19186237-19186304)
chr5 (56-105)||(544699-544748)
chr5 (51-96)||(13483174-13483219)
chr5 (43-104)||(16979044-16979105)
[»] chr4 (15 HSPs)
chr4 (43-151)||(53770337-53770446)
chr4 (50-151)||(53771066-53771168)
chr4 (43-124)||(4703227-4703308)
chr4 (50-148)||(31844729-31844828)
chr4 (50-134)||(47878501-47878585)
chr4 (44-95)||(19050299-19050350)
chr4 (50-137)||(44158523-44158610)
chr4 (50-117)||(48740037-48740104)
chr4 (50-104)||(26172959-26173013)
chr4 (50-124)||(47874596-47874670)
chr4 (55-95)||(19051253-19051293)
chr4 (50-133)||(54574448-54574531)
chr4 (43-134)||(39868944-39869033)
chr4 (50-117)||(42278088-42278155)
chr4 (50-104)||(54574822-54574876)
[»] chr1 (19 HSPs)
chr1 (50-147)||(7945571-7945669)
chr1 (44-151)||(22856684-22856792)
chr1 (43-148)||(5782421-5782527)
chr1 (50-126)||(5783126-5783202)
chr1 (54-124)||(7944187-7944257)
chr1 (43-117)||(9341035-9341109)
chr1 (43-105)||(10333196-10333258)
chr1 (50-148)||(32665787-32665886)
chr1 (59-134)||(51450023-51450098)
chr1 (45-123)||(52440571-52440649)
chr1 (50-106)||(25037928-25037984)
chr1 (50-106)||(25043140-25043196)
chr1 (50-105)||(3117700-3117755)
chr1 (50-105)||(6612470-6612525)
chr1 (54-105)||(6614000-6614051)
chr1 (54-148)||(10332993-10333088)
chr1 (54-105)||(44020037-44020088)
chr1 (50-115)||(9339687-9339752)
chr1 (50-95)||(34088486-34088531)
[»] chr7 (22 HSPs)
chr7 (50-134)||(10899090-10899174)
chr7 (45-151)||(8374918-8375025)
chr7 (43-126)||(48788682-48788765)
chr7 (52-134)||(44333161-44333243)
chr7 (50-124)||(48647460-48647534)
chr7 (50-134)||(35727721-35727805)
chr7 (43-126)||(48646079-48646162)
chr7 (50-126)||(13578337-13578413)
chr7 (45-126)||(12220053-12220134)
chr7 (50-126)||(7258305-7258381)
chr7 (50-134)||(8048801-8048885)
chr7 (50-106)||(46286553-46286609)
chr7 (54-117)||(8375604-8375667)
chr7 (50-148)||(43457464-43457563)
chr7 (43-117)||(30925018-30925092)
chr7 (56-105)||(34704960-34705009)
chr7 (50-103)||(44530628-44530681)
chr7 (50-123)||(45583717-45583790)
chr7 (54-105)||(33607644-33607695)
chr7 (50-124)||(48777288-48777362)
chr7 (50-134)||(39708125-39708209)
chr7 (54-134)||(42477403-42477482)
[»] chr3 (20 HSPs)
chr3 (50-134)||(17700540-17700624)
chr3 (50-148)||(45600956-45601054)
chr3 (50-151)||(47118068-47118170)
chr3 (50-134)||(48573007-48573091)
chr3 (50-124)||(11773068-11773142)
chr3 (50-151)||(33428452-33428554)
chr3 (50-106)||(48574476-48574532)
chr3 (41-143)||(19114545-19114648)
chr3 (63-134)||(52318347-52318418)
chr3 (50-118)||(36280334-36280402)
chr3 (50-117)||(2591666-2591733)
chr3 (50-105)||(3671089-3671144)
chr3 (50-137)||(20464088-20464175)
chr3 (54-117)||(36278991-36279054)
chr3 (50-124)||(17701936-17702010)
chr3 (57-126)||(47427890-47427959)
chr3 (50-134)||(34263827-34263911)
chr3 (43-117)||(49261547-49261618)
chr3 (50-133)||(55389486-55389569)
chr3 (50-124)||(2592024-2592098)
[»] chr6 (3 HSPs)
chr6 (50-148)||(30748006-30748105)
chr6 (50-134)||(31218977-31219061)
chr6 (43-151)||(31219170-31219279)
[»] chr2 (22 HSPs)
chr2 (43-134)||(31091537-31091628)
chr2 (53-134)||(5915012-5915093)
chr2 (45-134)||(17466840-17466929)
chr2 (43-124)||(24458092-24458173)
chr2 (50-134)||(32766256-32766340)
chr2 (50-134)||(40000351-40000435)
chr2 (43-134)||(15441981-15442072)
chr2 (50-117)||(17330247-17330314)
chr2 (50-124)||(2910132-2910206)
chr2 (50-106)||(14704056-14704112)
chr2 (50-126)||(38985006-38985082)
chr2 (54-134)||(39015027-39015107)
chr2 (50-105)||(31814361-31814416)
chr2 (50-105)||(32764989-32765044)
chr2 (56-148)||(31090171-31090264)
chr2 (50-134)||(24459463-24459547)
chr2 (50-113)||(17466084-17466147)
chr2 (50-151)||(5914309-5914410)
chr2 (50-95)||(7073700-7073745)
chr2 (50-95)||(21733788-21733833)
chr2 (43-105)||(39016393-39016451)
chr2 (50-102)||(34037690-34037742)
[»] chr8 (10 HSPs)
chr8 (43-106)||(5965452-5965515)
chr8 (50-105)||(5736893-5736948)
chr8 (50-148)||(32898462-32898561)
chr8 (50-124)||(35177427-35177501)
chr8 (43-100)||(45476218-45476275)
chr8 (50-148)||(41754812-41754910)
chr8 (50-106)||(35178821-35178877)
chr8 (44-95)||(28619050-28619101)
chr8 (53-107)||(1951991-1952045)
chr8 (57-131)||(41754023-41754097)
[»] scaffold0767 (1 HSPs)
scaffold0767 (43-105)||(5650-5712)
[»] scaffold0034 (1 HSPs)
scaffold0034 (50-124)||(116087-116161)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 263
Target Start/End: Complemental strand, 13483162 - 13482913
Alignment:
Q  10 ataattctattaagtgattgtggcacgcacataagagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaat 109  Q
    |||||||| |||||||||||||||||    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||     
T  13483162 ataattctgttaagtgattgtggcac----ataagagacaaaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtcaggaac 13483067  T
Q  110 ctatgtgaaagcgaggtacagagtcgggactaaaatgaccatgtcctgaatttatgtttattgaaatggtgacagtgtttcattcattgaattcacttta 209  Q
    |||| |||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13483066 ctatctgaatgcgagatacagagtcgggactaaagtgatcatttcctgaatttatgtttattgaaatggtgacagtgtttcattcattgaattcacttta 13482967  T
Q  210 caccagcactttttcagacagcaccaaatcacactacactgcaacaatacaata 263  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13482966 caccagcactttttcagacagcaccaaatcacactaccctgcaacaatacaata 13482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 290 - 407
Target Start/End: Complemental strand, 13482884 - 13482767
Alignment:
Q  290 cagttagcagggctaaggcttgatatagtgcagggctaataagagggcaagcagcgaaagctacggccacccactgcgtgttttgtgttcttctagtatt 389  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13482884 cagttagcagggctaaagcttgatatagtgcagggctaataagagggcaagcagcgaaagctacggccacccactgcgtgttttgtgttcttctagtatt 13482785  T
Q  390 gcatttcctcagttttct 407  Q
    ||||||||||||||||||    
T  13482784 gcatttcctcagttttct 13482767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 456 - 561
Target Start/End: Complemental strand, 13482716 - 13482611
Alignment:
Q  456 agctttgtatatttatcaatcaactcagcataaaacaaatctaagatattacattcatcgtgtttcatttaaatccacaacagtccaaaaatatcccttc 555  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13482716 agctttgtatatttatcaatcaactcagcataaaacaaatctaagatattacattcattgtgtttcatttcaatccacaacagtccaaaaatatcccttc 13482617  T
Q  556 acagat 561  Q
    ||||||    
T  13482616 acagat 13482611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 28591131 - 28591215
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||| | ||||||||||| || || || |||||||||||| |||||||||| | |||||||| |||||||| |||||||    
T  28591131 aaagtgataaaggaagtgcagagtcagggatttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtc 28591215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 16611841 - 16611758
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||| |||||||||||| ||||||| | | |||| |||||||||||||||| |||||||||  | |||||||| ||||||||    
T  16611841 agagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtgacagcgaggt 16611758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 546053 - 546151
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtcgggactaaaatgac 148  Q
    |||||||||||| ||||||||||| |  ||||| | |||||||||| |||||||||| | |||||||| |||||| | || | ||||||||||| ||||    
T  546053 aaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacctatgtgacagcgagctgcaaaatcgggactaaagtgac 546151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 8074557 - 8074483
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| |  ||||||| ||||||    
T  8074557 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacttatgtgacagcgag 8074483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 18400283 - 18400194
Alignment:
Q  63 aagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgaccat 151  Q
    ||||||||||| || ||||||||| |||||||| |||||||| | | |||||||| || ||||| ||||||| ||||||||| |||||||    
T  18400283 aagtgcagagtcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtgaccat 18400194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 8075850 - 8075934
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||  ||| ||||| |||||| | | |||||||| |||||||    
T  8075850 aaagtgataacgaaagtgcagaatcagatacttttttgtatttaatcttgaatcagggatctatctaacagcgaggtgcagagtc 8075934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 9538054 - 9538122
Alignment:
Q  38 acataagagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||| |||||| ||| |||||||| ||||||| | | ||||||||||||||||||||| ||||||||||    
T  9538054 acatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagg 9538122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 25590536 - 25590453
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||  ||||||||| | |||||||| ||||||||||| || |||||||| | |||||||| |||||||| |||||||    
T  25590536 aaagtgataacagaagtgcagaatcagagacttatttgtatttaa-tccgagtcagggacctatgtgacagcgaggtgcagagtc 25590453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 4592967 - 4592888
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtaca 129  Q
    |||||||||||| ||||||||||| || ||||| ||||||||||||  ||||||||| |  ||||||| |||||| ||||    
T  4592967 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacttatgtgacagcgagctaca 4592888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 2464782 - 2464721
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtca 104  Q
    |||||| |||||||||||| ||||||||||| || ||||| ||||||||||||  |||||||    
T  2464782 agagactaaagtgataacgtaagtgcagagttagggacttatttgtatttaatcatgagtca 2464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 18004756 - 18004699
Alignment:
Q  38 acataagagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    |||| |||||| |||||||||||| ||||||||||| | |||| ||||||||||||||    
T  18004756 acatcagagactaaagtgataacggaagtgcagagtcatagacctctttgtatttaat 18004699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 2466791 - 2466875
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| || ||||| ||| |||||||| |||| |||   | |||||||| |||||||| |||||||    
T  2466791 aaagtgataacggaagtgcagagttagggacttatttttatttaatcctgaatcaatgacctatgtgatagcgaggtgcagagtc 2466875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 19183056 - 19182980
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||||||||| ||||| ||||| ||  |||| |||||||||||| |||||||||  | |||||||| ||||||||    
T  19183056 aaagtgataacggaagtgtagagtcaggaacttatttgtatttaatcctgagtcagagacctatgtgacagcgaggt 19182980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 9537101 - 9537046
Alignment:
Q  78 gacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagt 133  Q
    ||||||||||||||||||||| ||||||  | |||||||| |||||||| ||||||    
T  9537101 gacttctttgtatttaattctaagtcagagacctatgtgacagcgaggtgcagagt 9537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 19186237 - 19186304
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||||||| || || ||||| |||||||| |||||||||||| || ||||||| | ||||||||    
T  19186237 aaagtgataacggaaatgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtga 19186304  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 544748 - 544699
Alignment:
Q  56 ataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||| ||||||||||| || ||||| |||||||||||| |||||||||    
T  544748 ataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtcag 544699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 13483174 - 13483219
Alignment:
Q  51 aagtgataacgaaagtgcagagtaagagacttctttgtatttaatt 96  Q
    ||||||||||| ||||||| ||| |||||||| |||||||||||||    
T  13483174 aagtgataacggaagtgcaaagtcagagacttgtttgtatttaatt 13483219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 16979105 - 16979044
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtca 104  Q
    |||||| ||| |||||||| |||| |||||| || ||||| |||| ||||||||||||||||    
T  16979105 agagactaaaatgataacgtaagtacagagttagggacttatttgcatttaattctgagtca 16979044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 53770446 - 53770337
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggacta 141  Q
    |||||| | |||||||| | ||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| | |||||    
T  53770446 agagactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatgtgaatgcgaggtgcagagtcagagacta 53770347  T
Q  142 aaatgaccat 151  Q
    || |||||||    
T  53770346 aagtgaccat 53770337  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 53771066 - 53771168
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||| ||||||||||| || | ||||||||||||||||||||||||||| | |||||||| | |||||| ||||||| ||||||||| ||||    
T  53771066 aaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaagtgac 53771165  T
Q  149 cat 151  Q
    |||    
T  53771166 cat 53771168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 4703227 - 4703308
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||| |||||||||||| ||||| | ||| | |||||||||||||||||||||||||| ||| | |||||||| ||||||    
T  4703227 agagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggacctatgtgacagcgag 4703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 31844828 - 31844729
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagag-tcgggactaaaatgac 148  Q
    |||||||||| | ||||| ||||| || ||||| |||||||||||| |||||||||| | |||||||| |||||||| ||||| | ||||||||| ||||    
T  31844828 aaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagctagggactaaagtgac 31844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 47878501 - 47878585
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||| ||||| || ||||| |||||||||||| | |||||||| | |||||| | |||||||| |||||||    
T  47878501 aaagtgataacggaagtgtagagtcagggacttatttgtatttaatccagagtcagggacctatgtaacagcgaggtgcagagtc 47878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 19050350 - 19050299
Alignment:
Q  44 gagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    ||||| |||||||||||| |||||||||||  ||||||||||||||||||||    
T  19050350 gagactaaagtgataacggaagtgcagagtccgagacttctttgtatttaat 19050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 44158610 - 44158523
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtcggg 137  Q
    ||||| ||||| |||||  ||||| || |||||||||||||||||| |||||||||||| || ||| | | |||||| ||||||||||    
T  44158610 aaagtaataacaaaagtatagagtcagggacttctttgtatttaatcctgagtcaggaacctctgtaacaacgaggtgcagagtcggg 44158523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 48740037 - 48740104
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||||||  |||||||||||  | ||||||||||||||||||| ||||||||| ||||| ||||    
T  48740037 aaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagggatctacgtga 48740104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 26172959 - 26173013
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtca 104  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||  |||||||    
T  26172959 aaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtca 26173013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 47874670 - 47874596
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||||| | || ||||| ||||||||||||  ||||||||| | |||||||| ||||||    
T  47874670 aaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtcagggacctatgtgatagcgag 47874596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 19051253 - 19051293
Alignment:
Q  55 gataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  19051253 gataacgaaagtgtagagtcagagacttctttgtatttaat 19051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 54574531 - 54574448
Alignment:
Q  50 aaagtgataacgaaagtgcagagt-aagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagt 133  Q
    |||||||||||| ||||||||||| |||| |||| |||||||||||| |||||||||  | |||||||| |||||| | ||||||    
T  54574531 aaagtgataacggaagtgcagagttaaga-acttatttgtatttaatcctgagtcagagacctatgtgacagcgagatgcagagt 54574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 39869033 - 39868944
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||| |||||||||||| |||||||||||  || |||| ||||||||||||| ||||||||| | || ||| | |||||||| |||||||    
T  39869033 agagactaaagtgataacggaagtgcagagtc-ga-acttgtttgtatttaattatgagtcagggacctttgtaacagcgaggtgcagagtc 39868944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 42278155 - 42278088
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||||||| ||||||||||| ||  |||| |||||||||||| | |||||||| | ||||||||    
T  42278155 aaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtcagggacctatgtga 42278088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 54574822 - 54574876
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtca 104  Q
    |||||||||||  ||||||||||| ||||| || |||||||||||| ||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctgagtca 54574876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 7945571 - 7945669
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatga 147  Q
    |||||||||||| ||||||| ||| |||||||| |||||||||||| |||||||||||| |||||||| |||||||| ||||||| ||||| |||||||    
T  7945571 aaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatgtgacagcgaggtgcagagtcagggaccaaaatga 7945669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 22856792 - 22856684
Alignment:
Q  44 gagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaa 142  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||| ||| | | || ||| ||||||| | ||||||    
T  22856792 gagactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatctttgtaacaacgtggtgcagagtcagtgactaa 22856693  T
Q  143 aatgaccat 151  Q
    | |||||||    
T  22856692 agtgaccat 22856684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 5782527 - 5782421
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggacta 141  Q
    |||||| |||||||||| | ||||||| | | |||||||||||||||||||||  ||||||||  | |||||||| |||||||| ||||||| |||||||    
T  5782527 agagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtgacagcgaggtgcagagtcagggacta 5782428  T
Q  142 aaatgac 148  Q
    |||||||    
T  5782427 aaatgac 5782421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 5783126 - 5783202
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||||||||| ||||||||||| |  ||||||||||||||||||||||||||  | |||||||||| ||||||||    
T  5783126 aaagtgataacggaagtgcagagtcatggacttctttgtatttaattctgagtcgaggatctatgtgacagcgaggt 5783202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 7944257 - 7944187
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||||||||||| |  ||||| ||||||||||||| ||||||||| | |||||||| ||||||    
T  7944257 tgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtcagggacctatgtgacagcgag 7944187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 9341035 - 9341109
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||| |||||||||||  ||||||| ||| |||||||| |||||||||||| |||||||||| | ||||||||    
T  9341035 agagactaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggacctatgtga 9341109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 10333196 - 10333258
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||||||||||||  ||||||||    
T  10333196 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcag 10333258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 32665787 - 32665886
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||| ||||||||||| | |||||| ||||||||||||  ||||||||  | |||||||| |||||| | |||| || ||||||||| ||||    
T  32665787 aaagtgataacggaagtgcagagtcaaagacttatttgtatttaatcatgagtcagagacctatgtgacagcgagctgcagaatcagggactaaagtgac 32665886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 51450098 - 51450023
Alignment:
Q  59 acgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    ||||||||||||||| ||| ||||||||| |||||||| ||||| ||||| || |||||  ||||||| |||||||    
T  51450098 acgaaagtgcagagtcagaaacttctttgcatttaattatgagttaggaacctttgtgacggcgaggtgcagagtc 51450023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 52440571 - 52440649
Alignment:
Q  45 agacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcga 123  Q
    |||| |||||||||| | ||||||||||| |||||||| ||| |||||||| |||| ||||| | |||||||| |||||    
T  52440571 agactaaagtgataatggaagtgcagagtcagagacttatttatatttaatcctgactcagggacctatgtgacagcga 52440649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 25037984 - 25037928
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||| |||| |||||| || ||||||||||||||||||  |||||||||    
T  25037984 aaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcagg 25037928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 25043196 - 25043140
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||| |||| |||||| || ||||||||||||||||||  |||||||||    
T  25043196 aaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcagg 25043140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 3117755 - 3117700
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||||| ||||| ||||| ||||| |||||||||||||||  ||||||||    
T  3117755 aaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtcag 3117700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 6612525 - 6612470
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||| | ||||||||||| |||||||| ||||||||||||  ||||||||    
T  6612525 aaagtgataatggaagtgcagagtcagagacttgtttgtatttaatcatgagtcag 6612470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 6614000 - 6614051
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||  ||||||||||| |||||||| |||||||||||| |||||||||    
T  6614000 tgataactgaagtgcagagtcagagacttatttgtatttaatcctgagtcag 6614051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 10333088 - 10332993
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||| |||||||||||||| ||||| ||| |||||||| |||| ||| | | |||||||| | |||||| || |||| ||||||||| ||||    
T  10333088 tgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaagtgac 10332993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 44020088 - 44020037
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||| ||||||||||| |||||||||||| ||||||||  ||||||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatcttgagtcag 44020037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 9339752 - 9339687
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgt 115  Q
    |||||||||||| |||||||||||  | || || |||||||||||| |||||||||| | ||||||    
T  9339752 aaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcagggacctatgt 9339687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 34088486 - 34088531
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    |||||||||  | ||||||||||| |||||||||||||||||||||    
T  34088486 aaagtgatagtggaagtgcagagtcagagacttctttgtatttaat 34088531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 10899090 - 10899174
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| ||| |||| | |||||||||| |||||||| |||||||    
T  10899090 aaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaaggatctatgtgacagcgaggtgcagagtc 10899174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 8375025 - 8374918
Alignment:
Q  45 agacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaa 143  Q
    |||| |||||||||||| ||||||| | | ||| |||| ||||||||||||||||||||||  | |||||||| |||||||| ||||||| |||||||||    
T  8375025 agactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatgtgacagcgaggtgcagagtcagggactaaa 8374926  T
Q  144 atgaccat 151  Q
    || |||||    
T  8374925 atcaccat 8374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 48788682 - 48788765
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||| ||||||||| ||||||||| | |||||||| ||||||||    
T  48788682 agagactaaagtgataacggaagtgcagagtcagagacttatttatatttaattatgagtcagggacctatgtgacagcgaggt 48788765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 44333243 - 44333161
Alignment:
Q  52 agtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||  ||||||||| | |||||||| |||||||| |||||||    
T  44333243 agtgataacggaagtgcagagtcagagacttatttgtatttaatcatgagtcagggacctatgtgacagcgaggtgcagagtc 44333161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 48647460 - 48647534
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||| | |||||||| ||||||    
T  48647460 aaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacctatgtgatagcgag 48647534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 35727805 - 35727721
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| | ||||||||| |||||||| ||| |||||||| |||||||||| | |||||||| |||||||| |||||||    
T  35727805 aaagtgataacggatgtgcagagtcagagacttatttatatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtc 35727721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 48646162 - 48646079
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||| |||||||||||| ||||| ||||| || ||||| |||||||||||| |||||||||| | |||||||| ||||||||    
T  48646162 agagactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgaggt 48646079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 13578337 - 13578413
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||  |||| | ||| ||||||||    
T  13578337 aaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctgagtcagtgatctttatgacagcgaggt 13578413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 12220134 - 12220053
Alignment:
Q  45 agacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||| ||||||||| |  ||||||||||| |||||||||||| ||||||||  |||||||||||||| ||||| | ||||||    
T  12220134 agactaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtcaggaatctttgtgacaacgaggt 12220053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 7258381 - 7258305
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||||||||  ||||||||||| |||||||| |||||||||||| |||||| ||| | |||||||| | ||||||    
T  7258381 aaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggacctatgtgacaacgaggt 7258305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 8048801 - 8048885
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||  ||||||||  | || ||||  |||||||| |||||||    
T  8048801 aaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcagagacctttgtgtcagcgaggtgcagagtc 8048885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 46286609 - 46286553
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||  ||||||||||| |||||||| |||||||||||| ||||||||||    
T  46286609 aaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 46286553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 8375604 - 8375667
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||| ||||||||||| ||| |||||||||||||||||  ||||||||| | ||||||||    
T  8375604 tgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatgtga 8375667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 43457563 - 43457464
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||| |||||||||||  | ||||| |||||||||||| |||||||||| | ||||| || |||||| | |||| || ||||||||| ||||    
T  43457563 aaagtgataacggaagtgcagagtcggggacttatttgtatttaatcctgagtcagggacctatgcgacagcgagctgcagaatcagggactaaagtgac 43457464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 30925018 - 30925092
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||| ||||| |||||| ||||||| ||| |||||||| |||||||||||| |||||||| | | ||||||||    
T  30925018 agagactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggacctatgtga 30925092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 34705009 - 34704960
Alignment:
Q  56 ataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    ||||||||||| || ||| ||||||||||||||||||||| |||||||||    
T  34705009 ataacgaaagtacacagtcagagacttctttgtatttaatcctgagtcag 34704960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 44530628 - 44530681
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtc 103  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||| |||||||    
T  44530628 aaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtc 44530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 45583790 - 45583717
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcga 123  Q
    |||||||||||| ||||||||| | ||  |||| | ||||||||||||||||||||| | |||||||| |||||    
T  45583790 aaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatgtgatagcga 45583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 33607644 - 33607695
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||| ||||||||| | ||||||||||||||||||||| |||| ||||    
T  33607644 tgataacggaagtgcagaatcagagacttctttgtatttaatcctgaatcag 33607695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 48777362 - 48777288
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||||||| || || || ||||||||||||  ||||||||| |  ||||||| ||||||    
T  48777362 aaagtgataacggaagtgcagagtcagggaattatttgtatttaatcatgagtcagggacttatgtgacagcgag 48777288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 39708209 - 39708125
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||| |||  | |||||||||||||| |||  ||||||| | | || |||||  |||||||||||||||    
T  39708209 aaagtgataacggaagtgcaaagtcggtgacttctttgtattcaatcttgagtcatggacctttgtgacggcgaggtacagagtc 39708125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 42477482 - 42477403
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||| ||||||||||| || ||||| |||||||||||| |||||||||  | ||||| || | |||||| |||||||    
T  42477482 tgataacggaagtgcagagtcag-gacttatttgtatttaatcctgagtcagagacctatgcgacaacgaggtgcagagtc 42477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 17700624 - 17700540
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||||| |||||||| | |||||| |||||||    
T  17700624 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagtc 17700540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 45600956 - 45601054
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||| ||||||||||| || |||||||||||||||||| |||| ||||| | |||||||| ||||||| |||||||| ||||||||| ||||    
T  45600956 aaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatgtgacagcgagggacagagtcagggactaaagtgac 45601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 47118068 - 47118170
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| || |  ||| ||| | |||||| ||||||| ||||||||| ||||    
T  47118068 aaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctgagtcggggacttatatgacaacgaggtgcagagtcagggactaaagtgac 47118167  T
Q  149 cat 151  Q
    |||    
T  47118168 cat 47118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 48573091 - 48573007
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| |||| ||| |||||||||||| |||||||||| | |||||||| | |||||| |||||||    
T  48573091 aaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtc 48573007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 11773068 - 11773142
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||| | |||||||| ||||||    
T  11773068 aaagtgataacggaagtgtagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 11773142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 33428452 - 33428554
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    ||||||| |||| || |||||||| |  ||||||||||||||||||||||||||||| | |||||||| | |||||| ||||||| ||||| ||| ||||    
T  33428452 aaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaagtgac 33428551  T
Q  149 cat 151  Q
    |||    
T  33428552 cat 33428554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 48574476 - 48574532
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||    
T  48574476 aaagtgataacgaaagtgcagagtcagggacttatttgtatttaatcctgagtcagg 48574532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 19114648 - 19114545
Alignment:
Q  41 taagagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggac 139  Q
    |||||||| |||||||||||| ||||||| ||| || ||||||||||||||||||  ||||||||| | || ||||| | ||| || ||||||| |||||    
T  19114648 taagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaacgaagtgcagagtcagggac 19114549  T
Q  140 taaa 143  Q
    ||||    
T  19114548 taaa 19114545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 52318347 - 52318418
Alignment:
Q  63 aagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    ||||||||||| || ||||| |||||||||||| |||||||||| |||||||||| ||||| || |||||||    
T  52318347 aagtgcagagtcagggacttatttgtatttaatcctgagtcagggatctatgtgacagcgaagtgcagagtc 52318418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 36280334 - 36280402
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaa 118  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||| |||||||||  | |||||||||    
T  36280334 aaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcagagacctatgtgaa 36280402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 2591733 - 2591666
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||| | | ||||||||||| |||||||| |||||||||||| |||||||||| | ||||||||    
T  2591733 aaagtgatcatggaagtgcagagtcagagacttgtttgtatttaatcctgagtcagggacctatgtga 2591666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 3671144 - 3671089
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||||| ||||| ||||| | |||||| ||||||||||||||||||||||    
T  3671144 aaagtgataacggaagtggagagtcatagacttatttgtatttaattctgagtcag 3671089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 20464175 - 20464088
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtcggg 137  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||  |||| |||| | || ||||| | |||||| ||||||||||    
T  20464175 aaagtgataacagaagtgcagagtcagggacttctttgtatttaatcatgagccagggacctttgtgacaacgaggtgcagagtcggg 20464088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 36279054 - 36278991
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||| ||||||||||| |||||||| |||||||||||| |||| ||||| | ||||||||    
T  36279054 tgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggacctatgtga 36278991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 17701936 - 17702010
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||||||| || ||||| ||||||||||||  ||||||||| | |||| ||| ||||||    
T  17701936 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctatatgacagcgag 17702010  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 47427959 - 47427890
Alignment:
Q  57 taacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    ||||| ||||||| ||| || ||||||||||||||||||| ||||||| | | |||||||| ||||||||    
T  47427959 taacgtaagtgcacagtcagggacttctttgtatttaattttgagtcaaggacctatgtgacagcgaggt 47427890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 34263911 - 34263827
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||| | ||||| ||||| |||||||| |||||||||||| |||| ||| | | || ||||| |||||||| |||||||    
T  34263911 aaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtc 34263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 49261547 - 49261618
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||| |||||||||||| || |||||||| |||||   ||||||||||||| |||||||||| | ||||||||    
T  49261547 agagactaaagtgataacggaaatgcagagttagaga---ctttgtatttaatcctgagtcagggacctatgtga 49261618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 55389486 - 55389569
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagt 133  Q
    |||||||||||| ||||| ||||| || |||||  |||||||||||| |||||||   | |||||||| |||||||| ||||||    
T  55389486 aaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagt 55389569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 2592024 - 2592098
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||   |||| || ||||| |||||||||||| |||||||||| | |||||||| ||||||    
T  2592024 aaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 2592098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 30748105 - 30748006
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||| || ||||||| | |||||||| |||||||| |||| || ||||||||| ||||    
T  30748105 aaagtgataacgaaagtgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgacagcgaggtgcagaatcagggactaaagtgac 30748006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 31219061 - 31218977
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| ||  ||||||||||||||||| |||||| | | | |||||||| |||||||| |||||||    
T  31219061 aaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtc 31218977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 31219170 - 31219279
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggacta 141  Q
    |||||| |||||||||||| |||||  |||| ||  ||||||||||||||||| |||||| |   | |||||||| |||||||| ||||||| |||| ||    
T  31219170 agagactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatgtgacagcgaggtgcagagtcagggatta 31219269  T
Q  142 aaatgaccat 151  Q
    || |||||||    
T  31219270 aagtgaccat 31219279  T

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Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 31091537 - 31091628
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||| |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| | |||||||| ||| |||| |||||||    
T  31091537 agagactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtc 31091628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 5915012 - 5915093
Alignment:
Q  53 gtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||||   | |||| |||||||||||| |||||||    
T  5915012 gtgataacggaagtgcagagttagtgacttctttgtatttaattctgagtcaaagacctatttgaaagcgaggtgcagagtc 5915093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 17466840 - 17466929
Alignment:
Q  45 agacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||     ||||||| |||||||| |||||||    
T  17466840 agactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtcagcggcttatgtgacagcgaggtgcagagtc 17466929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 24458173 - 24458092
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||| |||||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||||| | |||||||| ||||||    
T  24458173 agagactaaagtgataacgaaagtgtagagtcagaaacttatttgtatttaattttgagtcagggacctatgtgatagcgag 24458092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 32766256 - 32766340
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| | |||||||| | |||||| |||||||    
T  32766256 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtc 32766340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 40000351 - 40000435
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||||||||| |||||||| || |||||||| |||||||||||| || | ||||| |||||||| | |||||||| |||||||    
T  40000351 aaagtgataacggaagtgcagggttagagacttatttgtatttaatcctcaatcagggatctatgtaacagcgaggtgcagagtc 40000435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 15441981 - 15442072
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||| ||||||||||  |||||||| | | |  |||| ||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  15441981 agagactaaagtgataataaaagtgcacattcaaggactactttgtatttaatcctgagtcaggaatctttgtgacagcgaggaacagagtc 15442072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 17330247 - 17330314
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtga 117  Q
    |||||||||||| || |||||||| |||||||| |||||||||||| |||||||||| | ||||||||    
T  17330247 aaagtgataacggaaatgcagagtcagagacttatttgtatttaatcctgagtcagggacctatgtga 17330314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 2910206 - 2910132
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    ||||||| || | ||||||||||| |||||||| |||||||||||| | |||||||| |||||||||| ||||||    
T  2910206 aaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcagggatctatgtgacagcgag 2910132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 14704112 - 14704056
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||||    
T  14704112 aaagtgataacggaagtgcagagtgagggacttatttgtatttaatcctgagtcagg 14704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 38985006 - 38985082
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggt 126  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||| ||||||  ||||| ||||| || |||||    
T  38985006 aaagtgataacggaagtgcagagtcaaggacttctttgtatttaattccgagtcataaatctttgtgacagtgaggt 38985082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 39015107 - 39015027
Alignment:
Q  54 tgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    |||||| ||||||||||||| | |||| | |||||||||||| |||||||| | |||||||||  |||||||| |||||||    
T  39015107 tgataatgaaagtgcagagtcaaagacgtatttgtatttaatcctgagtcaaggatctatgtggcagcgaggtgcagagtc 39015027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 31814361 - 31814416
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||||| ||||||||||| | | |||||||| ||||||||||||||||||    
T  31814361 aaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctgagtcag 31814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 32765044 - 32764989
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||    
T  32765044 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcag 32764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 31090264 - 31090171
Alignment:
Q  56 ataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||| ||||||||||| |||||||| ||| |||||||| |||||||| | | |||||||| |||||| | |||| || ||||||||| ||||    
T  31090264 ataacggaagtgcagagtcagagacttatttatatttaatcctgagtcaaggacctatgtgacagcgagctgcagaatcagggactaaattgac 31090171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 24459463 - 24459547
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc 134  Q
    ||||||||||   |||||||| || |||||||| |||||||||||| |||| ||||| | |||||||| |||||| | |||||||    
T  24459463 aaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatgtgacagcgagatgcagagtc 24459547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 17466147 - 17466084
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctat 113  Q
    ||||||| |||| ||||||||||| |||||  |||||||||||||| |||||||| ||| ||||    
T  17466147 aaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctgagtcaagaacctat 17466084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 5914410 - 5914309
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtcgggactaaaatgacc 149  Q
    ||||||||||||  |||||| ||| |  ||||||||||||||||||| ||||||||  | |||| | | | |||||| || |||| | ||||||||||||    
T  5914410 aaagtgataacgggagtgcaaagtcactgacttctttgtatttaattgtgagtcagagacctatatcacaacgaggtgcaaagtcagaactaaaatgacc 5914311  T
Q  150 at 151  Q
    ||    
T  5914310 at 5914309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 7073745 - 7073700
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    |||||||||||| ||||||||| | |||||||| ||||||||||||    
T  7073745 aaagtgataacggaagtgcagaatcagagacttatttgtatttaat 7073700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 21733788 - 21733833
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    |||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  21733788 aaagtgatgacggaagtgcagagtcagagacttatttgtatttaat 21733833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 39016393 - 39016451
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||| |||||||||||| |||||||||||    ||||| |||||||||||| |||||||||    
T  39016393 agagactaaagtgataacggaagtgcagagt----gacttatttgtatttaatcctgagtcag 39016451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 34037690 - 34037742
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagt 102  Q
    |||||||||||  ||||||||||| | |||||| |||||||||||| ||||||    
T  34037690 aaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagt 34037742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 5965452 - 5965515
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||||||||||| ||||||||||    
T  5965452 agagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagg 5965515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 5736948 - 5736893
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  5736948 aaagtgataacgaaagtgtagagttagagatttctttgtatttaattctgaatcag 5736893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 32898462 - 32898561
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtc-gggactaaaatgac 148  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| || ||||||| | |||||||| || ||| | ||||||| ||||||||| ||||    
T  32898462 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctaagtcagggacctatgtgacagtgagttgcagagtcagggactaaagtgac 32898561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 35177501 - 35177427
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||||||| || ||||| |||||||||||| | |||||||| | |||||||| ||||||    
T  35177501 aaagtgataacggaagtgcagagtcagggacttatttgtatttaatccggagtcagggacctatgtgacagcgag 35177427  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 45476275 - 45476218
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctga 100  Q
    |||||| |||||||||||  ||||||||||| |||||||| |||||||||||||||||    
T  45476275 agagactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctga 45476218  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 41754812 - 41754910
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacagagtcgggactaaaatgac 148  Q
    ||||| |||||| ||||| ||||| ||  |||| |||||||||||| |||||||||  |||||||||| |||||||| |||| || ||| |||| ||||    
T  41754812 aaagtaataacggaagtgtagagtcaggaacttgtttgtatttaatcctgagtcagagatctatgtgacagcgaggtgcagaatcaggattaaagtgac 41754910  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 35178821 - 35178877
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagg 106  Q
    |||||||||||| ||||||||| | || ||||| |||||||||||| ||||||||||    
T  35178821 aaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagg 35178877  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 28619101 - 28619050
Alignment:
Q  44 gagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaat 95  Q
    ||||| |||||||||||||||||||||||| |  || |||||||||||||||    
T  28619101 gagactaaagtgataacgaaagtgcagagtcaatgatttctttgtatttaat 28619050  T

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Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 1952045 - 1951991
Alignment:
Q  53 gtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcagga 107  Q
    ||||||| |||| |||||||| ||| |||| |||||||||||| |||||||||||    
T  1952045 gtgataatgaaaatgcagagtcagaaacttatttgtatttaatcctgagtcagga 1951991  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 41754097 - 41754023
Alignment:
Q  57 taacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgaggtacaga 131  Q
    ||||||||||| ||||| || ||||| ||| |||||||| |||||||||| | |||||||| ||| |||| ||||    
T  41754097 taacgaaagtgtagagtcagggacttgtttatatttaatcctgagtcagggacctatgtgacagcaaggtgcaga 41754023  T

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Target: scaffold0767 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 5712 - 5650
Alignment:
Q  43 agagacgaaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcag 105  Q
    |||||| |||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||    
T  5712 agagactaaagtgataacggaagtgtagagtcagggacttctttgtatttaattctgagtcag 5650  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 116161 - 116087
Alignment:
Q  50 aaagtgataacgaaagtgcagagtaagagacttctttgtatttaattctgagtcaggaatctatgtgaaagcgag 124  Q
    |||||||||||| ||||||| ||| || ||||| |||||||||||| |||||||||| | |||||||| ||||||    
T  116161 aaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 116087  T

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