View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1696_high_23 (Length: 292)

Name: NF1696_high_23
Description: NF1696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1696_high_23
NF1696_high_23
[»] chr4 (43 HSPs)
chr4 (8-278)||(37934641-37934897)
chr4 (74-177)||(21802114-21802215)
chr4 (74-174)||(17655600-17655699)
chr4 (74-177)||(22199429-22199530)
chr4 (74-177)||(46442014-46442115)
chr4 (74-176)||(36073519-36073619)
chr4 (75-177)||(10442581-10442682)
chr4 (74-177)||(36073121-36073222)
chr4 (74-177)||(44893007-44893108)
chr4 (74-177)||(49387681-49387782)
chr4 (74-177)||(53123201-53123302)
chr4 (74-176)||(44893596-44893696)
chr4 (74-147)||(30563379-30563452)
chr4 (74-174)||(9089040-9089138)
chr4 (74-174)||(24128409-24128507)
chr4 (74-177)||(2625007-2625108)
chr4 (8-177)||(4751555-4751718)
chr4 (74-177)||(47290236-47290337)
chr4 (74-176)||(33530479-33530579)
chr4 (77-177)||(11314045-11314144)
chr4 (74-177)||(7744906-7745007)
chr4 (74-177)||(31078613-31078714)
chr4 (74-177)||(50156373-50156473)
chr4 (76-176)||(42671840-42671939)
chr4 (74-158)||(23964276-23964359)
chr4 (74-177)||(37219801-37219903)
chr4 (82-176)||(36073256-36073349)
chr4 (121-176)||(25063369-25063423)
chr4 (84-174)||(24392854-24392942)
chr4 (8-58)||(36073056-36073106)
chr4 (98-152)||(36073731-36073785)
chr4 (8-58)||(53123140-53123190)
chr4 (8-58)||(7745018-7745068)
chr4 (8-58)||(9088979-9089029)
chr4 (8-58)||(24128348-24128398)
chr4 (8-58)||(30563318-30563368)
chr4 (110-152)||(33530688-33530730)
chr4 (8-58)||(47290175-47290225)
chr4 (8-58)||(50156484-50156534)
chr4 (13-58)||(2624951-2624996)
chr4 (8-57)||(10442696-10442745)
chr4 (8-49)||(21802237-21802278)
chr4 (82-139)||(44744610-44744667)
[»] chr7 (25 HSPs)
chr7 (74-177)||(45637881-45637982)
chr7 (74-177)||(15329444-15329545)
chr7 (74-177)||(35445567-35445668)
chr7 (74-177)||(48880721-48880822)
chr7 (74-176)||(24395141-24395241)
chr7 (77-177)||(15577641-15577739)
chr7 (74-177)||(3962148-3962249)
chr7 (74-176)||(34483008-34483108)
chr7 (74-177)||(42611981-42612082)
chr7 (74-176)||(30848739-30848839)
chr7 (74-174)||(4974532-4974630)
chr7 (77-153)||(20009915-20009991)
chr7 (74-158)||(29737314-29737398)
chr7 (74-176)||(35876414-35876514)
chr7 (90-176)||(25167651-25167735)
chr7 (84-175)||(37476876-37476965)
chr7 (82-153)||(42696261-42696332)
chr7 (84-177)||(15238564-15238655)
chr7 (108-150)||(36790296-36790338)
chr7 (84-177)||(18037157-18037248)
chr7 (8-58)||(45637821-45637871)
chr7 (110-152)||(15329296-15329338)
chr7 (8-58)||(25167756-25167806)
chr7 (8-58)||(48880833-48880883)
chr7 (110-152)||(48880927-48880969)
[»] chr3 (36 HSPs)
chr3 (74-177)||(22426139-22426240)
chr3 (74-176)||(19650695-19650795)
chr3 (74-177)||(3137208-3137309)
chr3 (74-177)||(3456234-3456335)
chr3 (74-177)||(33113964-33114065)
chr3 (74-177)||(34482682-34482783)
chr3 (82-177)||(36864826-36864920)
chr3 (74-177)||(37216847-37216948)
chr3 (74-176)||(3574321-3574421)
chr3 (74-176)||(30385570-30385670)
chr3 (74-175)||(8320378-8320477)
chr3 (84-177)||(40328011-40328103)
chr3 (74-158)||(33839705-33839789)
chr3 (74-177)||(6042047-6042148)
chr3 (74-176)||(3089589-3089689)
chr3 (74-176)||(47738281-47738382)
chr3 (74-174)||(33145882-33145980)
chr3 (74-177)||(48161076-48161177)
chr3 (74-176)||(2754889-2754989)
chr3 (74-176)||(37522223-37522323)
chr3 (84-177)||(8361833-8361924)
chr3 (84-176)||(9796824-9796914)
chr3 (74-174)||(42921295-42921394)
chr3 (74-153)||(26612916-26612995)
chr3 (75-176)||(24343720-24343820)
chr3 (84-177)||(41224414-41224505)
chr3 (74-175)||(46919064-46919164)
chr3 (74-134)||(42298032-42298092)
chr3 (8-58)||(3456173-3456223)
chr3 (85-153)||(41883038-41883106)
chr3 (110-152)||(6041907-6041949)
chr3 (8-58)||(22426250-22426300)
chr3 (8-58)||(30385120-30385170)
chr3 (8-58)||(33113902-33113952)
chr3 (8-58)||(37522162-37522212)
chr3 (8-58)||(42297973-42298023)
[»] chr8 (41 HSPs)
chr8 (8-176)||(10044452-10044618)
chr8 (74-176)||(6108028-6108128)
chr8 (74-177)||(26041907-26042008)
chr8 (74-177)||(32064916-32065017)
chr8 (8-177)||(37985850-37986011)
chr8 (74-177)||(40779923-40780024)
chr8 (74-176)||(17841645-17841745)
chr8 (74-176)||(25581034-25581134)
chr8 (74-176)||(30055686-30055786)
chr8 (74-175)||(14129029-14129128)
chr8 (74-174)||(24211169-24211267)
chr8 (75-174)||(38017103-38017201)
chr8 (74-177)||(1645758-1645859)
chr8 (74-177)||(15187730-15187831)
chr8 (75-174)||(37132477-37132575)
chr8 (80-177)||(1503637-1503732)
chr8 (74-174)||(20091598-20091696)
chr8 (74-174)||(34665551-34665649)
chr8 (86-177)||(31347570-31347659)
chr8 (74-176)||(3596836-3596936)
chr8 (74-176)||(42754837-42754937)
chr8 (82-147)||(41819590-41819655)
chr8 (74-158)||(39772614-39772697)
chr8 (74-136)||(8454003-8454065)
chr8 (84-177)||(7022159-7022250)
chr8 (74-158)||(32394027-32394109)
chr8 (74-158)||(35353211-35353294)
chr8 (82-173)||(3890412-3890502)
chr8 (94-177)||(30834849-30834931)
chr8 (13-58)||(1645871-1645916)
chr8 (74-153)||(24844677-24844756)
chr8 (124-158)||(1886633-1886667)
chr8 (8-58)||(6108139-6108189)
chr8 (8-58)||(17841756-17841806)
chr8 (8-58)||(24211459-24211509)
chr8 (110-152)||(26042116-26042158)
chr8 (8-58)||(40780035-40780085)
chr8 (13-58)||(8453948-8453993)
chr8 (110-147)||(15972877-15972914)
chr8 (110-151)||(27782117-27782158)
chr8 (13-58)||(38017048-38017093)
[»] chr5 (33 HSPs)
chr5 (74-177)||(14138837-14138938)
chr5 (74-176)||(8145543-8145643)
chr5 (74-177)||(4892372-4892473)
chr5 (74-176)||(33584124-33584224)
chr5 (74-177)||(3521801-3521902)
chr5 (74-177)||(12614531-12614633)
chr5 (74-177)||(25398408-25398509)
chr5 (74-177)||(37321587-37321688)
chr5 (74-176)||(6043307-6043407)
chr5 (74-176)||(38899520-38899621)
chr5 (74-175)||(3362949-3363048)
chr5 (74-173)||(12850972-12851069)
chr5 (84-176)||(22912852-22912942)
chr5 (74-176)||(2477806-2477906)
chr5 (74-153)||(11360948-11361026)
chr5 (98-176)||(27482017-27482095)
chr5 (74-132)||(4433845-4433903)
chr5 (84-177)||(17545476-17545567)
chr5 (110-151)||(12614733-12614774)
chr5 (8-58)||(3362887-3362937)
chr5 (8-58)||(36880229-36880279)
chr5 (81-137)||(13664736-13664792)
chr5 (8-58)||(4433913-4433963)
chr5 (8-58)||(4892311-4892361)
chr5 (8-58)||(11361037-11361087)
chr5 (8-58)||(12850910-12850960)
chr5 (8-58)||(14138777-14138827)
chr5 (8-58)||(25398347-25398397)
chr5 (8-58)||(31640846-31640896)
chr5 (8-58)||(33584235-33584285)
chr5 (8-58)||(37321699-37321749)
chr5 (110-151)||(10458421-10458462)
chr5 (110-147)||(31640763-31640800)
[»] chr1 (32 HSPs)
chr1 (74-177)||(18404618-18404719)
chr1 (74-176)||(37821629-37821729)
chr1 (74-177)||(20304924-20305025)
chr1 (74-177)||(44094867-44094968)
chr1 (74-177)||(51737675-51737776)
chr1 (74-176)||(25973577-25973677)
chr1 (74-175)||(40215158-40215257)
chr1 (74-177)||(19015574-19015675)
chr1 (8-177)||(36966502-36966664)
chr1 (74-177)||(41876236-41876337)
chr1 (74-176)||(3559787-3559887)
chr1 (74-176)||(25463846-25463946)
chr1 (74-176)||(6883657-6883757)
chr1 (84-177)||(33786425-33786516)
chr1 (84-176)||(32000061-32000151)
chr1 (74-176)||(9910086-9910186)
chr1 (77-153)||(44690838-44690914)
chr1 (84-174)||(40273888-40273976)
chr1 (98-176)||(19722894-19722970)
chr1 (113-175)||(52064373-52064434)
chr1 (74-177)||(10167569-10167671)
chr1 (110-149)||(33786635-33786674)
chr1 (8-58)||(44094807-44094857)
chr1 (8-58)||(6883596-6883646)
chr1 (8-58)||(18404551-18404601)
chr1 (8-58)||(19015513-19015563)
chr1 (8-58)||(25463785-25463835)
chr1 (8-58)||(40215097-40215147)
chr1 (8-58)||(44690935-44690985)
chr1 (110-151)||(27523255-27523296)
chr1 (8-56)||(9910201-9910249)
chr1 (112-152)||(32000269-32000309)
[»] chr2 (29 HSPs)
chr2 (74-176)||(9293370-9293470)
chr2 (74-176)||(10662058-10662158)
chr2 (74-177)||(13355018-13355119)
chr2 (74-173)||(31174633-31174730)
chr2 (74-176)||(33380377-33380477)
chr2 (74-176)||(35160929-35161029)
chr2 (74-172)||(3989246-3989342)
chr2 (74-176)||(7475303-7475403)
chr2 (74-177)||(22592880-22592984)
chr2 (8-176)||(23267857-23268018)
chr2 (74-146)||(16767285-16767357)
chr2 (84-177)||(43331092-43331183)
chr2 (74-147)||(21936252-21936325)
chr2 (84-153)||(37335824-37335893)
chr2 (84-176)||(9723586-9723677)
chr2 (84-174)||(21393483-21393570)
chr2 (84-135)||(34320991-34321042)
chr2 (8-58)||(3989185-3989235)
chr2 (110-152)||(27847655-27847697)
chr2 (74-134)||(14941199-14941259)
chr2 (8-58)||(7475414-7475464)
chr2 (8-58)||(9293482-9293532)
chr2 (110-152)||(9723428-9723470)
chr2 (110-152)||(14941366-14941408)
chr2 (8-58)||(16767378-16767428)
chr2 (8-58)||(31174740-31174790)
chr2 (8-58)||(33380316-33380366)
chr2 (8-58)||(35160866-35160916)
chr2 (99-143)||(37335745-37335789)
[»] scaffold0228 (3 HSPs)
scaffold0228 (74-177)||(26106-26207)
scaffold0228 (74-177)||(16154-16255)
scaffold0228 (74-106)||(8572-8604)
[»] chr6 (26 HSPs)
chr6 (74-177)||(28675318-28675419)
chr6 (74-177)||(32702375-32702476)
chr6 (74-177)||(33696867-33696968)
chr6 (74-176)||(17175816-17175916)
chr6 (74-177)||(17705263-17705363)
chr6 (74-177)||(23290875-23290976)
chr6 (74-176)||(2309218-2309318)
chr6 (74-176)||(18365369-18365469)
chr6 (74-176)||(18370633-18370733)
chr6 (74-147)||(18889466-18889539)
chr6 (74-176)||(33695121-33695221)
chr6 (77-158)||(6031552-6031632)
chr6 (74-133)||(6127447-6127506)
chr6 (74-177)||(29693615-29693717)
chr6 (84-174)||(11548386-11548474)
chr6 (110-175)||(34238883-34238946)
chr6 (8-58)||(25987039-25987089)
chr6 (8-58)||(8515632-8515682)
chr6 (8-58)||(17175927-17175977)
chr6 (8-58)||(17705371-17705421)
chr6 (8-58)||(29693547-29693597)
chr6 (8-58)||(33695233-33695283)
chr6 (8-58)||(33696805-33696855)
chr6 (110-147)||(29693478-29693515)
chr6 (104-152)||(8515719-8515767)
chr6 (74-106)||(9752109-9752141)
[»] scaffold0085 (2 HSPs)
scaffold0085 (74-176)||(48019-48119)
scaffold0085 (8-58)||(47959-48009)
[»] scaffold0471 (2 HSPs)
scaffold0471 (74-174)||(13012-13110)
scaffold0471 (8-58)||(12951-13001)
[»] scaffold0204 (1 HSPs)
scaffold0204 (74-176)||(4566-4666)
[»] scaffold0178 (2 HSPs)
scaffold0178 (74-176)||(11791-11891)
scaffold0178 (110-152)||(11644-11686)
[»] scaffold0096 (2 HSPs)
scaffold0096 (74-176)||(41180-41280)
scaffold0096 (8-58)||(41120-41170)


Alignment Details
Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 37934897 - 37934641
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||               ||||||| ||||||||||||| ||||||||||      
T  37934897 ccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtattttttttt------atgaaaggttaataaatgagattgaaatctaagg 37934804  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcctctgacaaagagcaaacactctggattcgca 207  Q
    | |||||||||||||| ||||| ||||||||||||| ||||||||| ||  ||||||||| |||||||||||||||      ||||||||||||||||||    
T  37934803 gtgattattgtgtcatatcattattgaatctttcttaataaaatcagtc-ataatatctaacattttcctctgaca------aaacactctggattcgca 37934711  T
Q  208 ttagaaaagaaatgcaagannnnnnnnnnatgtcaggaaaatatatgtagaataatcatatattctaagtg 278  Q
    |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  37934710 ttagaaaagaaatgcaaga-tttttttttatgtcaggaaaatatatgtagaataatcatatattctaagtg 37934641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 21802118  T
Q  174 tcct 177  Q
    ||||    
T  21802117 tcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||| |  |||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattc-ttaatatctagcattt 17655698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 22199429 - 22199530
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 22199526  T
Q  174 tcct 177  Q
    ||||    
T  22199527 tcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 46442014 - 46442115
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 46442111  T
Q  174 tcct 177  Q
    ||||    
T  46442112 tcct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 36073519 - 36073619
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 36073616  T
Q  174 tcc 176  Q
    |||    
T  36073617 tcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 10442682 - 10442581
Alignment:
Q  75 tgaaagattaa-taaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 10442585  T
Q  174 tcct 177  Q
    ||||    
T  10442584 tcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 36073121 - 36073222
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||| |||||| |||||||| || ||| |||||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatc-atttttgatatctagcattt 36073218  T
Q  174 tcct 177  Q
    ||||    
T  36073219 tcct 36073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 44893108 - 44893007
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 44893011  T
Q  174 tcct 177  Q
    ||||    
T  44893010 tcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 49387782 - 49387681
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| |||||||| ||| || ||||||| |||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatc-atccttgatatctaacattt 49387685  T
Q  174 tcct 177  Q
    ||||    
T  49387684 tcct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 53123201 - 53123302
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 53123298  T
Q  174 tcct 177  Q
    ||||    
T  53123299 tcct 53123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 44893596 - 44893696
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 44893693  T
Q  174 tcc 176  Q
    |||    
T  44893694 tcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 30563379 - 30563452
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 9089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 24128409 - 24128507
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 24128506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 2625007 - 2625108
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  |||||||| ||||||||||||| ||||||||| || || ||||||| |||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttctt-ataaaatcattc-ttgatatctaacattt 2625104  T
Q  174 tcct 177  Q
    ||||    
T  2625105 tcct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 4751555 - 4751718
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||||               |||||||||||||||||||||||||||||||||     
T  4751555 ccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttctttttt----atgaaagattaataaatgagactgaaatctaaag 4751650  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    | | |||||||| |||||||||||| ||| |||||| ||||||| | || || |||||||||||||||||    
T  4751651 gtggttattgtgccatgtcattcttaaatttttctt-ataaaattattc-ttgatatctagcattttcct 4751718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 47290236 - 47290337
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||| |||||||||||||||||||||||| | |||||||||  |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 47290333  T
Q  174 tcct 177  Q
    ||||    
T  47290334 tcct 47290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||| |||||| || ||||||||| || || |||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattc-ttgatatctagcattt 33530482  T
Q  174 tcc 176  Q
    |||    
T  33530481 tcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 11314144 - 11314045
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    |||| ||||||||| |||||  |||||||  | |||||||||||||||||||||||| ||||||||||||||||||| || || ||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattc-ttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 7745007 - 7744906
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||| |||||||||||||| ||||||||||| | ||||||||||  |||||||||||||||||||||| ||||||||| || || ||||||| |||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctaacattt 7744910  T
Q  174 tcct 177  Q
    ||||    
T  7744909 tcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 31078714 - 31078613
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||| ||| || ||||||||| || || |||||||||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaat-tttttttataaaatcattc-ttgatatctagcattt 31078617  T
Q  174 tcct 177  Q
    ||||    
T  31078616 tcct 31078613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 50156473 - 50156373
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||| |||||| ||||||||| || || ||||||| |||||    
T  50156473 atgaaagattaataaatgagactgaaatct-aaggtgattattatgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctaacattt 50156377  T
Q  174 tcct 177  Q
    ||||    
T  50156376 tcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  76 gaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttc 175  Q
    ||||| |||| |||||||||| ||||||||    ||||||| |||||||||||||||||||||||||||||||||||| || || ||||||| |||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattc-ttgatatctaacattttc 42671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 23964359 - 23964276
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    ||||||||||||||||||||| |||||||||||   ||||||| || |||||||||||| |||||||||| ||||||||| ||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattctt 23964276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 37219801 - 37219903
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||| ||| ||||||||||    ||||||| || |||||||||||| |||||||||||||||||||| || || ||||||| |||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattc-ttgatatctaacattt 37219899  T
Q  174 tcct 177  Q
    ||||    
T  37219900 tcct 37219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||| ||||||||||||||  |  |||||| || ||| |||||||| ||||||||||||||||||| || |||| |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatc-atttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 25063423 - 25063369
Alignment:
Q  121 catgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||||||||||||||||||||||||||| || || ||||||||||||||||    
T  25063423 catgtcattcttgaatctttcttgataaaatcattc-ttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    ||||||||||||||||||||||    ||||||||||  ||||||||||| ||| ||||||||| |||||| || || ||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattc-ttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36073056 - 36073106
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  36073056 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 36073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 36073731 - 36073785
Alignment:
Q  98 aaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||||| | ||||||| ||||||||||||||| |||||||||| ||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatc 36073785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 53123140 - 53123190
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  53123140 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 53123190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7745068 - 7745018
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  7745068 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7745018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 9088979 - 9089029
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9088979 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9089029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 24128348 - 24128398
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  24128348 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 24128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30563318 - 30563368
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  30563318 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 33530688 - 33530730
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| || |||||||||||||||| |||||||||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatc 33530730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 47290175 - 47290225
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  47290175 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 47290225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 50156534 - 50156484
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  50156534 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 50156484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 2624951 - 2624996
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgta 2624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10442745 - 10442696
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgt 57  Q
    |||| |||||||||| |||| ||||||| |||||||||||| ||||||||    
T  10442745 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 21802278 - 21802237
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggt 49  Q
    |||| ||||||||||||||| ||||||| |||||||||||||    
T  21802278 ccaataaaatctcagtctggccggaaatcatggggtggtggt 21802237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 44744610 - 44744667
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctt 139  Q
    ||||||||| ||||||||||||||     ||||||| |||||||||||||||||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatctt 44744667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 9e-33; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 45637881 - 45637982
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttaatatctagcattt 45637978  T
Q  174 tcct 177  Q
    ||||    
T  45637979 tcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 15329444 - 15329545
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| ||||| |||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttt-atatctagcattt 15329541  T
Q  174 tcct 177  Q
    ||||    
T  15329542 tcct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| |||||| ||||||||| || || |||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 35445664  T
Q  174 tcct 177  Q
    ||||    
T  35445665 tcct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 48880822 - 48880721
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 48880725  T
Q  174 tcct 177  Q
    ||||    
T  48880724 tcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 24395141 - 24395241
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| || ||||||||| || || |||||||||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattc-ttgatatctagcattt 24395238  T
Q  174 tcc 176  Q
    |||    
T  24395239 tcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 15577739 - 15577641
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || ||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 3962148 - 3962249
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| || |||||| ||||||||| || || |||||||||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttctt-ataaaatcattc-ttgatatctagcattt 3962245  T
Q  174 tcct 177  Q
    ||||    
T  3962246 tcct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || ||||||| |||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctaacattt 34483105  T
Q  174 tcc 176  Q
    |||    
T  34483106 tcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 42611981 - 42612082
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||  ||||||||| ||||||||| || || |||||||||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattc-ttgatatctagcattt 42612078  T
Q  174 tcct 177  Q
    ||||    
T  42612079 tcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| |||||| |||||| || || || |||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaagcattc-ttgatatctagcattt 30848836  T
Q  174 tcc 176  Q
    |||    
T  30848837 tcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||| || ||||||||| || || |||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttt-tttataaaatcattc-ttgatatctagcattt 4974533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 20009991 - 20009915
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    |||| ||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatca 20009915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 29737314 - 29737398
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| ||||| |||||| |||||||||||||||||||| ||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattctt 29737398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| ||  || |||||| ||||||||| || || |||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattc-ttgatatctagcattt 35876511  T
Q  174 tcc 176  Q
    |||    
T  35876512 tcc 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  90 tgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || ||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttc 175  Q
    ||||||||||||||||||||||  | |||||||||| ||||||||| || ||||||||||||| |||||| || || |||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattc-ttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 42696261 - 42696332
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    ||||||||||||||||||||||||  | |||||||||  |||||||||||||||| ||| ||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatca 42696332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||| ||||| |||||| || || |||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattc-ttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 36790338 - 36790296
Alignment:
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaa 150  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  36790338 gagattattgtgtcatgtcattcttgaatctttgttgataaaa 36790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 18037157 - 18037248
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    |||||||| |||||||||||||  | |||||||||  |||||||||||| |||||||||||||||| ||| | || | ||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaa-tcattgttga-tatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 45637821 - 45637871
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  45637821 ccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgta 45637871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 15329338 - 15329296
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatc 15329296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 25167806 - 25167756
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  25167806 ccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 48880883 - 48880833
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  48880883 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48880833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 48880927 - 48880969
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatc 48880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 22426240 - 22426139
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 22426143  T
Q  174 tcct 177  Q
    ||||    
T  22426142 tcct 22426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 19650795 - 19650695
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 19650698  T
Q  174 tcc 176  Q
    |||    
T  19650697 tcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 3137309 - 3137208
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 3137212  T
Q  174 tcct 177  Q
    ||||    
T  3137211 tcct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 3456234 - 3456335
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 3456331  T
Q  174 tcct 177  Q
    ||||    
T  3456332 tcct 3456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 33113964 - 33114065
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 33114061  T
Q  174 tcct 177  Q
    ||||    
T  33114062 tcct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 34482783 - 34482682
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 34482686  T
Q  174 tcct 177  Q
    ||||    
T  34482685 tcct 34482682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 36864920 - 36864826
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||| || || |||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattc-ttgatatctagcattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 37216948 - 37216847
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 37216851  T
Q  174 tcct 177  Q
    ||||    
T  37216850 tcct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 3574324  T
Q  174 tcc 176  Q
    |||    
T  3574323 tcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30385570 - 30385670
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||| ||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatttagcattt 30385667  T
Q  174 tcc 176  Q
    |||    
T  30385668 tcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||| ||  || |||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatc-attattgatatctagcattt 8320380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 40328011 - 40328103
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattc-ttgatatctagcattttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 33839705 - 33839789
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    ||||||| |||||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattctt 33839789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 6042047 - 6042148
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 6042144  T
Q  174 tcct 177  Q
    ||||    
T  6042145 tcct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||  ||||||||| ||||||||| || || |||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattc-ttgatatctagcattt 3089686  T
Q  174 tcc 176  Q
    |||    
T  3089687 tcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||||| || || ||||||| |||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattc-ttgatatctaacattt 47738379  T
Q  174 tcc 176  Q
    |||    
T  47738380 tcc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 33145979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 48161076 - 48161177
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||||| || |||||| ||||||||| || || |||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattc-ttgatatctagcattt 48161173  T
Q  174 tcct 177  Q
    ||||    
T  48161174 tcct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||| |||||||||| ||||||| | || || |||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatgattc-ttgatatctagcattt 2754986  T
Q  174 tcc 176  Q
    |||    
T  2754987 tcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||| || |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 37522320  T
Q  174 tcc 176  Q
    |||    
T  37522321 tcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 8361924 - 8361833
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||| || || |||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattc-ttgatatctagcattttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||||| || || ||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| |||||||||||||||||||| |||  | |||| ||||| |||||||||||| ||| |||||||||||||||| || ||||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattc-ttaatatctagcattt 42921393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 26612916 - 26612995
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| ||||| ||||||||||||||||| |||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatca 26612995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    |||||| ||||||||| ||||||||||||||  | ||||||  | ||||||||||||||||||||| |||||||||||| || || ||||||| ||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattc-ttgatatctaacatttt 24343818  T
Q  175 cc 176  Q
    ||    
T  24343819 cc 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||| |||||| |||  | |||||||||| |||||||||||||||| ||||||||| |||||| || || |||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattc-ttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||| |||||||||||| |||| |||||||| | | ||||||| || ||||||||| |||||||||| |||||||||||| || || ||||||| |||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattc-ttgatatctaacattt 46919162  T
Q  174 tc 175  Q
    ||    
T  46919163 tc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 42298032 - 42298092
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttga 134  Q
    ||||||| ||||||||||||||||||||||||  | | |||||||||||||||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3456173 - 3456223
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3456173 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3456223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 41883106 - 41883038
Alignment:
Q  85 ataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    |||||| ||||||||||| |||   ||||||| |  ||||||||||||||||||||||| |||||||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatca 41883038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 6041949 - 6041907
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatc 6041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 22426300 - 22426250
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||| ||||||| |||||||||||| |||||||||    
T  22426300 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 22426250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30385120 - 30385170
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  30385120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33113902 - 33113952
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||| ||||||| |||||||||||| |||||||||    
T  33113902 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 33113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 37522162 - 37522212
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||  |||| |||||||||||||||||||| |||||||||    
T  37522162 ccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgta 37522212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 42297973 - 42298023
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||| | |||||||||    
T  42297973 ccaataaaatctcagtctggccggaaatcatggggtggtagatgttatgta 42298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 10044452 - 10044618
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||| ||||||||||||| |||| |||||||||||||||||               ||||||||||||||||||||| |||||||||||     
T  10044452 ccaataaaatctcaatctggtcggaaatcatggagtggtggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaag 10044551  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    | |||||||||| ||||||||||||||||||||||| ||||||||| || || ||||||||||||||||    
T  10044552 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattttcc 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 6108031  T
Q  174 tcc 176  Q
    |||    
T  6108030 tcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 26042008 - 26041907
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 26041911  T
Q  174 tcct 177  Q
    ||||    
T  26041910 tcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 32064916 - 32065017
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 32065013  T
Q  174 tcct 177  Q
    ||||    
T  32065014 tcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 37986011 - 37985850
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               |||||||||||||||||| ||||||||||||||     
T  37986011 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta------tttttttttatgaaagattaataaatgggactgaaatctaaag 37985918  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||||||    
T  37985917 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 40780024 - 40779923
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 40779927  T
Q  174 tcct 177  Q
    ||||    
T  40779926 tcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 17841745 - 17841645
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 17841648  T
Q  174 tcc 176  Q
    |||    
T  17841647 tcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 25581037  T
Q  174 tcc 176  Q
    |||    
T  25581036 tcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttaatatctagcattt 30055783  T
Q  174 tcc 176  Q
    |||    
T  30055784 tcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattc-ttgatatctagcattt 14129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 24211170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaatg-agattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 38017200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 1645859 - 1645758
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||  |||||||| ||||||||| || || |||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattc-ttgatatctagcattt 1645762  T
Q  174 tcct 177  Q
    ||||    
T  1645761 tcct 1645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 15187730 - 15187831
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 15187827  T
Q  174 tcct 177  Q
    ||||    
T  15187828 tcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  75 tgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    |||||| ||||||||| ||||||||||||||  | ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattc-ttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  80 gattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 20091599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 34665648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  86 taaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| |||||| || || |||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcct 31347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 3596839  T
Q  174 tcc 176  Q
    |||    
T  3596838 tcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 42754840  T
Q  174 tcc 176  Q
    |||    
T  42754839 tcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 41819655 - 41819590
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 39772697 - 39772614
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    |||||||||||||||| || ||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattctt 39772614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 8454003 - 8454065
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaat 136  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 8454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 7022159 - 7022250
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||  | |||||||||| | ||||||||||||||||||||||||||| ||| | || | ||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaa-tcattgttga-tatctagcattttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 32394027 - 32394109
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| ||| || ||||||||| ||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattt-tttataaaatcattctt 32394109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 35353211 - 35353294
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    ||||||||||||||||||||| | |||| |||| | |||||||||| |||||||||||||||| |||||| ||||||||| ||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattctt 35353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  82 ttaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||| ||| | ||||||||  | ||||||| || ||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattc-ttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 30834931 - 30834849
Alignment:
Q  94 actgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||  | | ||||| ||||||||||||||| |||||||||||||||||||| || || ||||||| |||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattc-ttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 1645916 - 1645871
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgta 1645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 24844756 - 24844677
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    ||||||| ||||||| | ||| | ||||||||  | ||||||| || |||| ||||||| ||||||||||||||||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatca 24844677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 158
Target Start/End: Original strand, 1886633 - 1886667
Alignment:
Q  124 gtcattcttgaatctttcttgataaaatcaatctt 158  Q
    |||||||||||||||||||||||||||||| ||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattctt 1886667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 6108189 - 6108139
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  6108189 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17841806 - 17841756
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  17841806 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24211509 - 24211459
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  24211509 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 26042116 - 26042158
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatc 26042158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 40780085 - 40780035
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  40780085 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 40780035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 8453948 - 8453993
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||| |||||||||||| ||||||| |||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgta 8453993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 15972877 - 15972914
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  15972877 gattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 27782117 - 27782158
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaat 151  Q
    ||||||| || ||||||||| |||||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaat 27782158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 38017048 - 38017093
Alignment:
Q  13 aaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 38017093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 14138837 - 14138938
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttaatatctagcattt 14138934  T
Q  174 tcct 177  Q
    ||||    
T  14138935 tcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 8145640  T
Q  174 tcc 176  Q
    |||    
T  8145641 tcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 4892372 - 4892473
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 4892469  T
Q  174 tcct 177  Q
    ||||    
T  4892470 tcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 33584127  T
Q  174 tcc 176  Q
    |||    
T  33584126 tcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 3521902 - 3521801
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 3521805  T
Q  174 tcct 177  Q
    ||||    
T  3521804 tcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||| ||||||||||| ||  || |||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatc-atacttgatatctagcattt 12614535  T
Q  174 tcct 177  Q
    ||||    
T  12614534 tcct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 25398408 - 25398509
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||| |||||| ||||||||| || || |||||||||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttctt-ataaaatcattc-ttgatatctagcattt 25398505  T
Q  174 tcct 177  Q
    ||||    
T  25398506 tcct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 37321688 - 37321587
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||||||| |||||| ||||||||| || || |||||||||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttctt-ataaaatcattc-ttgatatctagcattt 37321591  T
Q  174 tcct 177  Q
    ||||    
T  37321590 tcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 6043310  T
Q  174 tcc 176  Q
    |||    
T  6043309 tcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||| ||| || ||||||||| || || |||||||||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattc-ttgatatctagcattt 38899523  T
Q  174 tcc 176  Q
    |||    
T  38899522 tcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 3363046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||||| || || ||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||| ||||||||||||||| | ||| |||||| ||||||||||||  ||||||||| ||||||||| || || |||||||||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttctt-ataaaatcattc-ttgatatctagcattt 2477903  T
Q  174 tcc 176  Q
    |||    
T  2477904 tcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 11361026 - 11360948
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    ||||||||||||||||| ||| |||||||||||   |||||||||| ||||||||||||||||||||||| |||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttctt-ataaaatca 11360948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 27482017 - 27482095
Alignment:
Q  98 aaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||| | ||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattctt 132  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||| ||||| |||||| || || |||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattc-ttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 12614733 - 12614774
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaat 151  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaat 12614774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3362887 - 3362937
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3362887 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 36880279 - 36880229
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  36880279 ccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgta 36880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  81 attaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatc 137  Q
    |||||||||| ||||||||||||||  | ||||||| | ||||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 4433963 - 4433913
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  4433963 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 4433913  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 4892311 - 4892361
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  4892311 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 4892361  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 11361087 - 11361037
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  11361087 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 11361037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 12850910 - 12850960
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  12850910 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 12850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 14138777 - 14138827
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  14138777 ccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgta 14138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25398347 - 25398397
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  25398347 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31640896 - 31640846
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  31640896 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 31640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33584285 - 33584235
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33584285 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33584235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 37321749 - 37321699
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||| | ||||||| |||||||||||| |||||||||    
T  37321749 ccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgta 37321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 10458462 - 10458421
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaat 151  Q
    ||||||| || |||||||||||||||| ||||||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaat 10458421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 31640800 - 31640763
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||| || |||||||||||||||||||||||||||    
T  31640800 gattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 18404618 - 18404719
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||| || || |||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattc-ttgatatctagcattt 18404715  T
Q  174 tcct 177  Q
    ||||    
T  18404716 tcct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 37821632  T
Q  174 tcc 176  Q
    |||    
T  37821631 tcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 20305025 - 20304924
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 20304928  T
Q  174 tcct 177  Q
    ||||    
T  20304927 tcct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 44094867 - 44094968
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||| |||  || |||||||||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaat-aattcttgatatctagcattt 44094964  T
Q  174 tcct 177  Q
    ||||    
T  44094965 tcct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 51737675 - 51737776
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 51737772  T
Q  174 tcct 177  Q
    ||||    
T  51737773 tcct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 25973674  T
Q  174 tcc 176  Q
    |||    
T  25973675 tcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 40215255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 19015574 - 19015675
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||| ||||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatgtagcattt 19015671  T
Q  174 tcct 177  Q
    ||||    
T  19015672 tcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 36966664 - 36966502
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               |||||||||||||||||||||||||||||||||     
T  36966664 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-----tcttttttttatgaaagattaataaatgagactgaaatctaaag 36966570  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    | |||||||||| ||||| |||||||||| |||||| ||||||||| || || |||||||||||||||||    
T  36966569 gtgattattgtgccatgttattcttgaatttttctt-ataaaatcattc-ttgatatctagcattttcct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 41876337 - 41876236
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 41876240  T
Q  174 tcct 177  Q
    ||||    
T  41876239 tcct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 3559884  T
Q  174 tcc 176  Q
    |||    
T  3559885 tcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 25463943  T
Q  174 tcc 176  Q
    |||    
T  25463944 tcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | || |||| || |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 6883754  T
Q  174 tcc 176  Q
    |||    
T  6883755 tcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 33786516 - 33786425
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||||| || || |||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcct 33786425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||| |||||| || || ||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||| || |||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || ||||||| |||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctaacattt 9910089  T
Q  174 tcc 176  Q
    |||    
T  9910088 tcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 44690914 - 44690838
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    |||||||||||||| |||||| |||||||  | ||||||| || |||||||||||||||||||||||||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatca 44690838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||| ||||||||| |||||| || || ||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattc-ttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  98 aaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| || || ||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 52064434 - 52064373
Alignment:
Q  113 tattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttc 175  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatc-atttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 10167569 - 10167671
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||| |||||||||| ||||||||||||||| | ||||||||| |||| | |||||| ||| ||| || ||||||||| || ||||||| || |||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattc-ttaatatgtaacattt 10167667  T
Q  174 tcct 177  Q
    ||||    
T  10167668 tcct 10167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 33786635 - 33786674
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaa 149  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  33786635 gattattgtgccatgtcattcttgaatctttcttgataaa 33786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 44094807 - 44094857
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  44094807 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 44094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 6883596 - 6883646
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  6883596 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6883646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 18404551 - 18404601
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||| ||||||||||| || ||||||||| |||||||||    
T  18404551 ccaataaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 19015513 - 19015563
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  19015513 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 19015563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25463785 - 25463835
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  25463785 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25463835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 40215097 - 40215147
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  40215097 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 40215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44690985 - 44690935
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  44690985 ccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 27523255 - 27523296
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaat 151  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaat 27523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 9910249 - 9910201
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatg 56  Q
    |||| ||||||||||| ||| ||||||| |||||||||||| |||||||    
T  9910249 ccaataaaatctcagtatggccggaaatcatggggtggtgggtgttatg 9910201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 32000269 - 32000309
Alignment:
Q  112 ttattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatc 32000309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 9293373  T
Q  174 tcc 176  Q
    |||    
T  9293372 tcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 10662155  T
Q  174 tcc 176  Q
    |||    
T  10662156 tcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 13355018 - 13355119
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 13355115  T
Q  174 tcct 177  Q
    ||||    
T  13355116 tcct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 33380474  T
Q  174 tcc 176  Q
    |||    
T  33380475 tcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 35161026  T
Q  174 tcc 176  Q
    |||    
T  35161027 tcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatt 172  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||||| ||||||||| || || ||||||||||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |||||| |||||||||||| |||||| ||||||||| || || |||||||||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 7475306  T
Q  174 tcc 176  Q
    |||    
T  7475305 tcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 22592880 - 22592984
Alignment:
Q  74 atgaaagattaataaatgagactgaaa--tctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcat 171  Q
    ||||||| ||||||||| |||||||||  |||||  | |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattc-ttgatatctagcat 22592978  T
Q  172 tttcct 177  Q
    ||||||    
T  22592979 tttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 23268018 - 23267857
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgtannnnnnnnnnnnnnnatgaaagattaataaatgagactgaaatctaaat 107  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||               |||||||||||||||||||||||||||||||||     
T  23268018 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-----tcttttttttatgaaagattaataaatgagactgaaatctaaag 23267924  T
Q  108 gagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    | |||||||||| |||||||||||| ||| |||||| ||||||||| || || ||||||||||||||||    
T  23267923 gtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 16767357 - 16767285
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgat 146  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcct 177  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||| |||||| || || |||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattc-ttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 21936252 - 21936325
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||| ||| |||||||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 37335824 - 37335893
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatca 153  Q
    ||||||||||||||||||||||  | ||||| |||||||||||||| || ||||||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatca 37335893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttcc 176  Q
    ||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||| ||||||||| |||||| || || ||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattc-ttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    |||||||||||||||||| |||  | ||||||||||||||||||||||||||| ||||||||| |||||| || || ||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattc-ttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaa 135  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3989185 - 3989235
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  3989185 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3989235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 27847697 - 27847655
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatc 27847655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttga 134  Q
    ||||||| ||||||||| ||| ||||||||||    |||||||||||||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7475464 - 7475414
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  7475464 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 9293532 - 9293482
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9293532 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9293482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 9723470 - 9723428
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatc 9723428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 14941366 - 14941408
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| || ||||||||||||||||||||||| ||||||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatc 14941408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 16767428 - 16767378
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| || ||||||||| |||||||||    
T  16767428 ccaataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31174790 - 31174740
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||  ||||||| |||||||||||| |||||||||    
T  31174790 ccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgta 31174740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33380316 - 33380366
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33380316 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33380366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 35160866 - 35160916
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  35160866 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 35160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 37335789 - 37335745
Alignment:
Q  99 aatctaaatgagattattgtgtcatgtcattcttgaatctttctt 143  Q
    |||||||| | ||||||| || |||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctt 37335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 26106 - 26207
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 26203  T
Q  174 tcct 177  Q
    ||||    
T  26204 tcct 26207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 16154 - 16255
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 16251  T
Q  174 tcct 177  Q
    ||||    
T  16252 tcct 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 8572 - 8604
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaa 106  Q
    |||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaa 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 28675318 - 28675419
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 28675415  T
Q  174 tcct 177  Q
    ||||    
T  28675416 tcct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 32702375 - 32702476
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||| ||||||||| || || |||||||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattc-ttgatatctagcattt 32702472  T
Q  174 tcct 177  Q
    ||||    
T  32702473 tcct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 33696867 - 33696968
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||| ||||||||| || || |||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattc-ttgatatctagcattt 33696964  T
Q  174 tcct 177  Q
    ||||    
T  33696965 tcct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 17175819  T
Q  174 tcc 176  Q
    |||    
T  17175818 tcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 17705363 - 17705263
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaag-gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 17705267  T
Q  174 tcct 177  Q
    ||||    
T  17705266 tcct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 23290976 - 23290875
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||| ||| ||||||||||||||||||| |||||||| || ||| |||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttctt-ataaaatc-atttttgatatctagcattt 23290879  T
Q  174 tcct 177  Q
    ||||    
T  23290878 tcct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 2309318 - 2309218
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatc-atcgttgatatctagcattt 2309221  T
Q  174 tcc 176  Q
    |||    
T  2309220 tcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 18365372  T
Q  174 tcc 176  Q
    |||    
T  18365371 tcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 18370636  T
Q  174 tcc 176  Q
    |||    
T  18370635 tcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 18889539 - 18889466
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttctt-ataaaatcattc-ttgatatctagcattt 33695124  T
Q  174 tcc 176  Q
    |||    
T  33695123 tcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 6031632 - 6031552
Alignment:
Q  77 aaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctt 158  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||| || ||||||||| ||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttt-tttataaaatcattctt 6031552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttg 133  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 29693615 - 29693717
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||  |||||||| ||||||||||||||  |  |||||| || |||||||||||| |||||||||||||||||||| || || |||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattc-ttgatatctagcattt 29693713  T
Q  174 tcct 177  Q
    ||||    
T  29693714 tcct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  84 aataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcatttt 174  Q
    ||||||||||||||||||||||  | |||||||||| ||||||||||||||||| |||||||| |||||| || || ||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattc-ttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 34238946 - 34238883
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattttc 175  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  34238946 gattattgtgtcatgtcattcttgaatc-ttcttgataaaatcattc-ttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25987039 - 25987089
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  25987039 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 8515682 - 8515632
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  8515682 ccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgta 8515632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17175977 - 17175927
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  17175977 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17705421 - 17705371
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| ||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  17705421 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 17705371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29693547 - 29693597
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  29693547 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 33695283 - 33695233
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33695283 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33696805 - 33696855
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  33696805 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33696855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 29693515 - 29693478
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgata 147  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  29693515 gattattctgtcatgtcattcttgaatatttcttgata 29693478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 8515719 - 8515767
Alignment:
Q  104 aaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||| ||||||| || |||||||||||| ||||| |||||||||||||    
T  8515719 aaatgtgattattctgccatgtcattcttaaatctgtcttgataaaatc 8515767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaa 106  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 48019 - 48119
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    |||||||||||||||||||||||||||||||||   ||||||||||  |||||||||||||||||||||| ||||||||| || || |||||||||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttctt-ataaaatcattc-ttgatatctagcattt 48116  T
Q  174 tcc 176  Q
    |||    
T  48117 tcc 48119  T

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Target: scaffold0085; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 47959 - 48009
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  47959 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48009  T

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Target: scaffold0471 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 13012 - 13110
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 13109  T

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Target: scaffold0471; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 12951 - 13001
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  12951 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 13001  T

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Target: scaffold0204 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| ||| |||||| ||||||||| || || |||||||||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattc-ttgatatctagcattt 4663  T
Q  174 tcc 176  Q
    |||    
T  4664 tcc 4666  T

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Target: scaffold0178 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||| ||||||||| || || ||||||| |||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattc-ttgatatctaacattt 11888  T
Q  174 tcc 176  Q
    |||    
T  11889 tcc 11891  T

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Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 11686 - 11644
Alignment:
Q  110 gattattgtgtcatgtcattcttgaatctttcttgataaaatc 152  Q
    ||||||| ||||||||||||||||||  |||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatc 11644  T

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Target: scaffold0096 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 41180 - 41280
Alignment:
Q  74 atgaaagattaataaatgagactgaaatctaaatgagattattgtgtcatgtcattcttgaatctttcttgataaaatcaatctttaatatctagcattt 173  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttctt-ataaaatcattc-ttgatatctagcattt 41277  T
Q  174 tcc 176  Q
    |||    
T  41278 tcc 41280  T

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Target: scaffold0096; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 41120 - 41170
Alignment:
Q  8 ccaagaaaatctcagtctggtcggaaattatggggtggtggttgttatgta 58  Q
    |||| |||||||||| |||| ||||||| |||||||||||| |||||||||    
T  41120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 41170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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