View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1696_low_3 (Length: 530)
Name: NF1696_low_3
Description: NF1696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1696_low_3 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 473; Significance: 0; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 16 - 513
Target Start/End: Complemental strand, 3300214 - 3299709
Alignment:
| Q |
16 |
gaagtaaaactagccatgtttgagtgcaacacatggaagacaggaaagtaaatggaagggtgaggtgaaatg--------tactttatatgccgaatata |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3300214 |
gaagtaaaactagccatgtttgagtgcaacacatggaagacaggaaagtaaatgaaagggtgaggtgaaatggtgaaaggtactttatatgccgaatata |
3300115 |
T |
|
| Q |
108 |
attaatgacatgcatggtttgggaagcacacataacttgttctaataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaac |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3300114 |
attaatgacatgcatggtttgggaagcacacataacttgttctaataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaac |
3300015 |
T |
|
| Q |
208 |
tagttgttcttgttatcggaataaatagaaaaaagctaataaatgaaaagcatcttccttgttttggttattggaagtaacaaaacatcaatagaagtga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3300014 |
tagttgttcttgttatcggaataaatagaaaaaagctaataaatgaaaagcatcttccttgttttggttattggaagtaacaaaacatcaatagaagtga |
3299915 |
T |
|
| Q |
308 |
tgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatgg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3299914 |
tgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatgg |
3299815 |
T |
|
| Q |
408 |
cagttggttcgatttcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttat |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3299814 |
cagttggttcgatttcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttat |
3299715 |
T |
|
| Q |
508 |
cctgaa |
513 |
Q |
| |
|
|||||| |
|
|
| T |
3299714 |
cctgaa |
3299709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 16 - 513
Target Start/End: Complemental strand, 3393107 - 3392602
Alignment:
| Q |
16 |
gaagtaaaactagccatgtttgagtgcaacacatggaagacaggaaagtaaatggaagggtgaggtgaaatg--------tactttatatgccgaatata |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3393107 |
gaagtaaaactagccatgtttgagtgcaacacatggaagacaggaaagtaaatgaaagggtgaggtgaaatggtgaaaggtactttatatgccgaatata |
3393008 |
T |
|
| Q |
108 |
attaatgacatgcatggtttgggaagcacacataacttgttctaataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaac |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3393007 |
attaatgacatgcatggtttgggaagcacacataacttgttctaataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaac |
3392908 |
T |
|
| Q |
208 |
tagttgttcttgttatcggaataaatagaaaaaagctaataaatgaaaagcatcttccttgttttggttattggaagtaacaaaacatcaatagaagtga |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3392907 |
tagttgttcttgttatcggaataaatagaaaaaagctaataaatgaaaagcatcttccttgttttggttattggaagtaacaaaacatcaatagaagtga |
3392808 |
T |
|
| Q |
308 |
tgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatgg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3392807 |
tgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatgg |
3392708 |
T |
|
| Q |
408 |
cagttggttcgatttcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttat |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3392707 |
cagttggttcgatttcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttat |
3392608 |
T |
|
| Q |
508 |
cctgaa |
513 |
Q |
| |
|
|||||| |
|
|
| T |
3392607 |
cctgaa |
3392602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 230 - 513
Target Start/End: Original strand, 1163333 - 1163619
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttgttttggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagtg |
329 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1163333 |
aaatataaaaaagctaataaatgaaaagcatcttccttgtttttgttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagta |
1163432 |
T |
|
| Q |
330 |
g---atcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatggcagttggttcgatttcggt |
426 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| | || | || |||||||||||| |||| ||||||||| |
|
|
| T |
1163433 |
gatcatcatccatcaagcaaatcctccaatggaaaaaaaggtctataaaagggggatctgaagagtgggccagatggatggcagtaggttggatttcggt |
1163532 |
T |
|
| Q |
427 |
agattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaa |
513 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1163533 |
agattgctctttggtcgaagaggagtttagggtcttgttgtagatcttttaagaagagttgataaccagattcccacttatcctgaa |
1163619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 325 - 513
Target Start/End: Complemental strand, 1850293 - 1850120
Alignment:
| Q |
325 |
aagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatggcagttggttcgatttcg |
424 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || | || ||||||||||||||||| ||||||| |
|
|
| T |
1850293 |
aagtagatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaaaggggatctgatgggtgggccagatggatggcagttggttggatttcg |
1850194 |
T |
|
| Q |
425 |
gtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaa |
513 |
Q |
| |
|
|| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1850193 |
gt---------------cgaagaggagtttagggtcttgttgtaaatcttttaagaagagttgataatcagattcccacttatcctgaa |
1850120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 230 - 513
Target Start/End: Complemental strand, 40418758 - 40418471
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttg--ttttg--gttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgta |
325 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| ||||| |||||||||| |||||||||| || | ||||||| |||||||||||| ||| |
|
|
| T |
40418758 |
aaatagaaagaacctaataaatgaaaagcatcttccttgatttttgttgttattggaacaaacaaaacattaacaaaagtgatttttgtttaagctagta |
40418659 |
T |
|
| Q |
326 |
agtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggattt-gatggttgtgtcaaatggatggcagttggttcgatttcg |
424 |
Q |
| |
|
| | |||||||| |||||||| |||||||||||| ||||||||| || |||||||| || || ||| ||| | || |||||| ||| ||| |
|
|
| T |
40418658 |
actagatcatccgtcaagcaagtcctccaatggaacaaaaggtctggtag-gggggattacgaagggcccatcatatgtgtagcttttggtttgatctcg |
40418560 |
T |
|
| Q |
425 |
gtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaa |
513 |
Q |
| |
|
|||| ||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
40418559 |
gtaggctgctcttacgttgaagaggagtttagtgtcttgttgtagatcattgaagaagagttgataatcagattcccacttatcatgaa |
40418471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 230 - 510
Target Start/End: Complemental strand, 39880297 - 39880011
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttgttt-------tggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagctt |
322 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| || | ||||||||| || |||||||||| | ||||||| |||||||||||| |
|
|
| T |
39880297 |
aaatagaaagaacctaataaatgaaaagcatcttccttgattgttgttgttattattggaacaaa-aaaacatcaacaaaagtgatttttgtttaagcta |
39880199 |
T |
|
| Q |
323 |
gtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatt-tgatggttgtgtcaaatggatggcagttggttcgatt |
421 |
Q |
| |
|
|||| | |||||||| |||||||| |||||||||||| |||||||||| || |||||||| ||| || ||| ||| | || |||||| ||| |
|
|
| T |
39880198 |
gtaactagatcatccgtcaagcaagtcctccaatggaaaaaaaggtctggtag-gggggattctgaagggcccatcatatgtgtagcttttggtttgatc |
39880100 |
T |
|
| Q |
422 |
tcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcct |
510 |
Q |
| |
|
||||||| ||||||| | ||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
39880099 |
tcggtaggctgctcttacgctgaagatgagtttagtgttttgttgtagatcattgaagaagagttgataatcagattcccacttatcct |
39880011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 1163164 - 1163288
Alignment:
| Q |
79 |
ggtgaaatgtactttatatgccgaatataattaatgacatgcatggtttgggaagcac---------acataacttgttctaataaacataaatatcaaa |
169 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1163164 |
ggtgaaaggaactttatatgccgaatataat----gacaggcatggtttgggaagcacgatcaacacacataacttgttctaataaacataaatatcaaa |
1163259 |
T |
|
| Q |
170 |
cagaaattgcaaattgcaacagagtaagt |
198 |
Q |
| |
|
||||||||||||||||||||| ||||||| |
|
|
| T |
1163260 |
cagaaattgcaaattgcaacaaagtaagt |
1163288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 230 - 510
Target Start/End: Complemental strand, 38988180 - 38987896
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttgttt----tggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgta |
325 |
Q |
| |
|
||||||||| || |||||||||||| |||| |||||||| || | |||||||||| ||||||||||||| | ||||||| |||||||||||| || |
|
|
| T |
38988180 |
aaatagaaagaacctaataaatgaagagcagcttccttgattgttgttgttattggaacaaacaaaacatcaacaaaagtgatttttgtttaagctagtg |
38988081 |
T |
|
| Q |
326 |
agtggatcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatggcagttggttcgatttcgg |
425 |
Q |
| |
|
| | |||||||| |||||||| ||||||||||||| ||||||||| || |||| | || || |||| ||| | | |||| || |||||||| |
|
|
| T |
38988080 |
actagatcatccgtcaagcaagtcctccaatggatcaaaaggtctggtaggggggtctacgaagggcccgtcatatgtgtagtggttgtttggatttcgg |
38987981 |
T |
|
| Q |
426 |
tagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcct |
510 |
Q |
| |
|
||| |||| || | |||||| |||| || ||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
38987980 |
taggctgctgttatcttgaagagtagttgagggtcttgttgtagatcattgaagaagagttgataatcagattcccacttatcct |
38987896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 1850444 - 1850346
Alignment:
| Q |
144 |
ttgttctaataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaac--------tagttgttcttgttatcggaataaata |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
1850444 |
ttgttctaataaacataaatatcaaacagaaattgtaaattgcaacaaagtaagtgaaaagaaccttttaagtatttgttcttgttatcggaataaata |
1850346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 510
Target Start/End: Complemental strand, 39726906 - 39726615
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttgttt-------tggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagctt |
322 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| || | ||||||||| ||||||||||||| | | ||||| |||||||||||| |
|
|
| T |
39726906 |
aaatagaaagaacctaataaatgaaaagcatcttccttgattgttgttgttattattggaacaaacaaaacatcaacaaaggtgatttttgtttaagcta |
39726807 |
T |
|
| Q |
323 |
gtaagtgg----atcatccatcaagcaaatcctccaatggataaaaaggtcttctaaagggggatttgatggttgtgtcaaatggatggcagttggttcg |
418 |
Q |
| |
|
|||| | | ||||||| |||||||| ||||||||||||| ||||||||| || |||| | || || |||| ||| | | |||| || | |
|
|
| T |
39726806 |
gtaactagctagatcatccgtcaagcaagtcctccaatggatcaaaaggtctgataggggggtctacgaagggcccgtcatatgtgtagtggttgtttgg |
39726707 |
T |
|
| Q |
419 |
atttcggtagattgctcttcggtcgaagaggagtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcct |
510 |
Q |
| |
|
|||||||||| |||| || | |||||| |||| || ||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
39726706 |
atttcggtagggtgctgttatcttgaagagtagttgagggtcttgttgtagatcattgaagaagagttgataatcagattcccacttatcct |
39726615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 39169101 - 39169050
Alignment:
| Q |
455 |
agtgtcttgttgtagatcttttaagaagagttgataatcagattcccactta |
506 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
39169101 |
agtgtcttgttgtagatcttttaaaaagagttgataatcagattcccactta |
39169050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 39880540 - 39880491
Alignment:
| Q |
38 |
agtgcaacacatggaagacaggaaagtaaatggaagggtgaggtgaaatg |
87 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39880540 |
agtgcaacatatggaagacaggaaagtaaatggtagggtgaggtgaaatg |
39880491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 39400084 - 39400037
Alignment:
| Q |
467 |
tagatcttttaagaagagttgataatcagattcccacttatcctgaat |
514 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
39400084 |
tagatcttctaagaagagttgataatcagattgccacttatccggaat |
39400037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 39880405 - 39880327
Alignment:
| Q |
151 |
aataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaactagttgttcttgttatcggaataaa |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || ||||||||||| || |||||||||| || |||||||| |
|
|
| T |
39880405 |
aataaacataaatatcaaacagaaattgcaaactgcagcaacctaagtgaaaagcac---ttgttcttgtcattggaataaa |
39880327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 40418860 - 40418782
Alignment:
| Q |
151 |
aataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaagaactagttgttcttgttatcggaataaa |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || ||||||||||| || |||||||||| || |||||||| |
|
|
| T |
40418860 |
aataaacataaatatcaaacagaaattgcaaactgcagcaacctaagtgaaaagcac---ttgttcttgtcattggaataaa |
40418782 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 38988282 - 38988229
Alignment:
| Q |
151 |
aataaacataaatatcaaacagaaattgcaaattgcaacagagtaagtgaaaag |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || ||||||||||| |
|
|
| T |
38988282 |
aataaacataaatatcaaacagaaattgcaaactgcagcaacctaagtgaaaag |
38988229 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 230 - 374
Target Start/End: Original strand, 44444395 - 44444543
Alignment:
| Q |
230 |
aaatagaaaaaagctaataaatgaaaagcatcttccttg----ttttggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgta |
325 |
Q |
| |
|
||||||||| || ||||||||||||| |||| ||||||| |||| ||||||||| ||||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
44444395 |
aaatagaaataacctaataaatgaaaggcatattccttgattgttttcgttattggagtaaacaaaacatcaacaaaagtgatttttgtttaagcttgta |
44444494 |
T |
|
| Q |
326 |
agtggatcatccatcaagcaaatcctccaatggataaaaaggtcttcta |
374 |
Q |
| |
|
| | |||||||| |||||||| ||||| |||||| ||||| ||||||| |
|
|
| T |
44444495 |
actagatcatccgtcaagcaagtcctctaatggaacaaaagatcttcta |
44444543 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 370
Target Start/End: Original strand, 25911951 - 25912046
Alignment:
| Q |
275 |
ttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaaggtct |
370 |
Q |
| |
|
||||||||| ||||||||||||| | ||||||| |||||||||||| |||| | |||||||| |||||||| |||||||||||| ||||||||| |
|
|
| T |
25911951 |
ttattggaacaaacaaaacatcaacaaaagtgatttttgtttaagctagtaactagatcatccgtcaagcaagtcctccaatggaacaaaaggtct |
25912046 |
T |
|
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Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 450 - 513
Target Start/End: Original strand, 25912122 - 25912185
Alignment:
| Q |
450 |
agtttagtgtcttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaa |
513 |
Q |
| |
|
||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25912122 |
agtttagggtcttgctgtagataatttaagaagagttgataatcagattcccacttatcctgaa |
25912185 |
T |
|
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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 25911657 - 25911698
Alignment:
| Q |
45 |
cacatggaagacaggaaagtaaatggaagggtgaggtgaaat |
86 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
25911657 |
cacatggaagacaggaaagtaaatggtagggtgaggtgaaat |
25911698 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 513
Target Start/End: Original strand, 44444614 - 44444667
Alignment:
| Q |
460 |
cttgttgtagatcttttaagaagagttgataatcagattcccacttatcctgaa |
513 |
Q |
| |
|
|||||| ||||| ||||||||| |||| ||||||||||||| | |||||||||| |
|
|
| T |
44444614 |
cttgttttagatattttaagaaaagtttataatcagattccaatttatcctgaa |
44444667 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 25911785 - 25911821
Alignment:
| Q |
151 |
aataaacataaatatcaaacagaaattgcaaattgca |
187 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
25911785 |
aataaacataagtatcaaacagaaattgcaaactgca |
25911821 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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