View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16973_low_12 (Length: 235)
Name: NF16973_low_12
Description: NF16973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16973_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 32784201 - 32784402
Alignment:
| Q |
12 |
gagcagagatcaataaattatactatcactgtgtttctttctataggaaacatgactataacattcaaaacatcttaccttaagattagattaaataaca |
111 |
Q |
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| T |
32784201 |
gagcaaagatcaataaattatactatcactgtgtttctttctataggaaacatgactataacattcaaaacatcttaccttaagattagattaaataaca |
32784300 |
T |
|
| Q |
112 |
gatcattgtgaacttccgaaaaataactcgaaaaattattgcatctgttatacctacttaagctgtaagttaatgtgacagagatgaagcagttatcatg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32784301 |
gatcattgtgaacttccgaaaaataactcgaaaaattattgcatctgttatacctacttaagctgtaagttaatgtgacagagatgaagcagttatcatg |
32784400 |
T |
|
| Q |
212 |
cc |
213 |
Q |
| |
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|| |
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| T |
32784401 |
cc |
32784402 |
T |
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