View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16974_high_48 (Length: 227)
Name: NF16974_high_48
Description: NF16974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16974_high_48 |
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Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 37601577 - 37601389
Alignment:
| Q |
18 |
aattgattgaatgagcttatttttctttgtttcttgttgtacttgtactagctgtttgcgtgcatctatctattttatggtttccaaattccaacgcgca |
117 |
Q |
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| T |
37601577 |
aattgattgaatgagcttatttttctttgtttcttgttgtacttgtactagctgtttgcgtgcatctatctattttatggtttccaaattccaacgcgca |
37601478 |
T |
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| Q |
118 |
aaggtttgctgaaaaatatgattgggttttagatgccctttattgcaagttactactacaattactacaattggacttccaataatatgcct |
209 |
Q |
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| T |
37601477 |
aaggtttgctgaaaaatatgattgggttttagatgccctttattgcaagtta---ctacaattactacaattggacttccaataatatgcct |
37601389 |
T |
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