View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16974_low_19 (Length: 448)

Name: NF16974_low_19
Description: NF16974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16974_low_19
NF16974_low_19
[»] chr1 (41 HSPs)
chr1 (22-117)||(48259774-48259869)
chr1 (26-116)||(50349769-50349859)
chr1 (26-117)||(28751319-28751410)
chr1 (28-101)||(15698677-15698750)
chr1 (26-110)||(6377204-6377288)
chr1 (26-116)||(24040936-24041026)
chr1 (26-106)||(84440-84520)
chr1 (26-109)||(12851882-12851965)
chr1 (26-117)||(43105513-43105604)
chr1 (26-109)||(45749418-45749501)
chr1 (26-116)||(15646985-15647075)
chr1 (26-109)||(5317496-5317579)
chr1 (26-101)||(6332317-6332392)
chr1 (26-101)||(12002396-12002471)
chr1 (48-107)||(15823207-15823266)
chr1 (26-109)||(40719165-40719248)
chr1 (51-116)||(11134372-11134437)
chr1 (51-116)||(31491680-31491745)
chr1 (27-100)||(37437331-37437404)
chr1 (42-116)||(13408246-13408321)
chr1 (30-109)||(30006284-30006363)
chr1 (51-113)||(1740553-1740615)
chr1 (26-108)||(17919741-17919822)
chr1 (26-76)||(43929834-43929884)
chr1 (48-110)||(48009183-48009245)
chr1 (59-116)||(9915628-9915685)
chr1 (51-116)||(32806848-32806913)
chr1 (48-105)||(49894954-49895011)
chr1 (26-110)||(1429017-1429101)
chr1 (26-110)||(48319923-48320003)
chr1 (51-109)||(5854143-5854201)
chr1 (59-113)||(26252303-26252357)
chr1 (51-109)||(28200141-28200199)
chr1 (38-116)||(45377071-45377149)
chr1 (26-75)||(40060859-40060908)
chr1 (41-110)||(43755192-43755261)
chr1 (27-76)||(44583922-44583971)
chr1 (51-116)||(46046149-46046214)
chr1 (63-107)||(31699209-31699253)
chr1 (48-116)||(49468621-49468689)
chr1 (51-107)||(50591239-50591295)
[»] chr5 (31 HSPs)
chr5 (26-109)||(8960954-8961037)
chr5 (26-116)||(4751442-4751532)
chr5 (26-110)||(24436458-24436542)
chr5 (26-116)||(4742178-4742268)
chr5 (26-109)||(33693881-33693964)
chr5 (29-116)||(43257773-43257859)
chr5 (26-116)||(4371501-4371591)
chr5 (26-116)||(12167522-12167612)
chr5 (26-102)||(12992204-12992280)
chr5 (26-117)||(36660576-36660667)
chr5 (26-116)||(166561-166651)
chr5 (51-116)||(8336319-8336384)
chr5 (26-102)||(13066855-13066931)
chr5 (26-101)||(34919886-34919961)
chr5 (22-109)||(38982073-38982160)
chr5 (59-116)||(26660938-26660995)
chr5 (59-116)||(26932531-26932588)
chr5 (51-116)||(39730122-39730187)
chr5 (51-116)||(42103975-42104040)
chr5 (52-116)||(7145025-7145089)
chr5 (26-110)||(36783506-36783590)
chr5 (59-109)||(6519161-6519211)
chr5 (48-109)||(27652238-27652299)
chr5 (80-117)||(34209061-34209098)
chr5 (51-87)||(14620435-14620471)
chr5 (48-107)||(42661861-42661920)
chr5 (26-116)||(31557252-31557342)
chr5 (51-116)||(34972562-34972627)
chr5 (59-116)||(39566367-39566424)
chr5 (26-110)||(16886220-16886304)
chr5 (44-116)||(36296044-36296116)
[»] chr3 (47 HSPs)
chr3 (26-117)||(31290885-31290976)
chr3 (26-118)||(44648320-44648412)
chr3 (51-114)||(44676397-44676460)
chr3 (26-110)||(42857009-42857093)
chr3 (26-109)||(25061844-25061927)
chr3 (26-109)||(2567931-2568014)
chr3 (26-109)||(4476281-4476364)
chr3 (22-117)||(40049021-40049116)
chr3 (26-109)||(42740373-42740456)
chr3 (51-117)||(53560842-53560908)
chr3 (26-105)||(27483116-27483195)
chr3 (26-109)||(42791447-42791530)
chr3 (26-120)||(4392046-4392140)
chr3 (22-75)||(5244731-5244784)
chr3 (26-109)||(16240718-16240801)
chr3 (26-109)||(35099294-35099377)
chr3 (26-108)||(43580630-43580712)
chr3 (31-116)||(45095686-45095771)
chr3 (26-102)||(38165587-38165663)
chr3 (26-114)||(46362924-46363012)
chr3 (48-116)||(52201836-52201904)
chr3 (26-89)||(83446-83509)
chr3 (26-109)||(15514654-15514737)
chr3 (51-122)||(38363967-38364038)
chr3 (61-116)||(41287405-41287460)
chr3 (26-109)||(43599467-43599550)
chr3 (59-110)||(47895259-47895310)
chr3 (73-115)||(30186373-30186415)
chr3 (59-116)||(3152716-3152773)
chr3 (51-116)||(54261593-54261658)
chr3 (26-118)||(647502-647594)
chr3 (48-116)||(20512406-20512474)
chr3 (48-116)||(36541666-36541734)
chr3 (37-109)||(44854475-44854547)
chr3 (48-116)||(49470947-49471015)
chr3 (51-110)||(23525231-23525290)
chr3 (42-116)||(790239-790313)
chr3 (27-89)||(1340868-1340930)
chr3 (51-117)||(33024209-33024274)
chr3 (59-117)||(38277936-38277994)
chr3 (59-105)||(45213642-45213688)
chr3 (59-109)||(54933122-54933172)
chr3 (59-116)||(2458192-2458249)
chr3 (52-105)||(42940155-42940208)
chr3 (26-89)||(27027888-27027949)
chr3 (26-74)||(38457611-38457659)
chr3 (44-116)||(51398179-51398251)
[»] chr4 (37 HSPs)
chr4 (26-116)||(30492867-30492957)
chr4 (26-116)||(29840202-29840292)
chr4 (26-109)||(22212488-22212571)
chr4 (26-116)||(32140901-32140991)
chr4 (48-109)||(29519448-29519509)
chr4 (48-116)||(47321316-47321384)
chr4 (26-109)||(32140798-32140881)
chr4 (26-116)||(51737237-51737327)
chr4 (26-87)||(42672536-42672597)
chr4 (59-116)||(50623268-50623325)
chr4 (26-106)||(36805376-36805455)
chr4 (26-116)||(56556194-56556281)
chr4 (26-105)||(30022214-30022293)
chr4 (59-117)||(45889745-45889803)
chr4 (59-116)||(37654594-37654651)
chr4 (27-116)||(45049847-45049936)
chr4 (51-116)||(52847970-52848035)
chr4 (48-116)||(17499630-17499698)
chr4 (48-116)||(39984990-39985058)
chr4 (59-110)||(18430173-18430224)
chr4 (26-109)||(31987442-31987525)
chr4 (26-109)||(34096163-34096246)
chr4 (21-68)||(45520421-45520468)
chr4 (51-109)||(2728321-2728379)
chr4 (22-68)||(3093491-3093537)
chr4 (51-109)||(40010795-40010853)
chr4 (48-109)||(54042105-54042167)
chr4 (277-330)||(30615990-30616043)
chr4 (51-116)||(52957706-52957771)
chr4 (48-116)||(42605745-42605813)
chr4 (26-109)||(38692528-38692611)
chr4 (26-109)||(54092096-54092179)
chr4 (59-109)||(2493286-2493336)
chr4 (59-109)||(53814420-53814470)
chr4 (51-87)||(20448215-20448251)
chr4 (51-115)||(49080394-49080458)
chr4 (26-114)||(56422916-56423004)
[»] chr8 (28 HSPs)
chr8 (26-117)||(38328966-38329057)
chr8 (26-116)||(9022546-9022636)
chr8 (22-105)||(156366-156449)
chr8 (34-116)||(36915523-36915605)
chr8 (26-109)||(37185578-37185664)
chr8 (26-105)||(2812926-2813005)
chr8 (26-109)||(8382406-8382489)
chr8 (26-109)||(32326644-32326727)
chr8 (26-109)||(41414982-41415065)
chr8 (22-116)||(8106800-8106894)
chr8 (26-87)||(45187237-45187298)
chr8 (26-105)||(39970466-39970545)
chr8 (26-87)||(22601285-22601346)
chr8 (26-75)||(27109773-27109822)
chr8 (51-116)||(39463433-39463498)
chr8 (26-110)||(6839357-6839441)
chr8 (29-88)||(32661449-32661508)
chr8 (48-110)||(9304552-9304614)
chr8 (51-113)||(29025664-29025726)
chr8 (52-109)||(4530043-4530100)
chr8 (51-116)||(34168124-34168189)
chr8 (26-89)||(3095452-3095515)
chr8 (22-116)||(2803167-2803261)
chr8 (48-110)||(17921130-17921192)
chr8 (22-52)||(30789081-30789111)
chr8 (22-68)||(41790101-41790147)
chr8 (82-116)||(43561293-43561327)
chr8 (26-75)||(32061412-32061461)
[»] chr2 (37 HSPs)
chr2 (26-116)||(40987194-40987284)
chr2 (26-109)||(6592106-6592189)
chr2 (26-117)||(14378159-14378250)
chr2 (26-109)||(24775339-24775422)
chr2 (26-109)||(42970039-42970122)
chr2 (48-109)||(8774225-8774286)
chr2 (19-109)||(7743544-7743634)
chr2 (51-116)||(441143-441208)
chr2 (51-116)||(4133198-4133263)
chr2 (48-109)||(8789349-8789410)
chr2 (51-116)||(16807429-16807494)
chr2 (51-116)||(16846710-16846775)
chr2 (26-110)||(36360293-36360377)
chr2 (26-105)||(1360318-1360397)
chr2 (54-117)||(1423346-1423409)
chr2 (51-118)||(25332747-25332814)
chr2 (34-109)||(34225908-34225983)
chr2 (59-117)||(12342277-12342335)
chr2 (26-87)||(4536712-4536773)
chr2 (64-117)||(4566032-4566085)
chr2 (48-109)||(45081825-45081886)
chr2 (33-106)||(45147911-45147984)
chr2 (48-116)||(30855278-30855346)
chr2 (26-117)||(44228616-44228708)
chr2 (26-73)||(11171893-11171940)
chr2 (59-118)||(29396590-29396649)
chr2 (26-89)||(29795138-29795201)
chr2 (51-113)||(775799-775861)
chr2 (59-117)||(13562177-13562235)
chr2 (51-109)||(25383404-25383462)
chr2 (59-117)||(36106314-36106372)
chr2 (51-109)||(42005066-42005124)
chr2 (51-116)||(2459950-2460015)
chr2 (51-116)||(38809874-38809939)
chr2 (59-116)||(42753931-42753988)
chr2 (51-116)||(43388569-43388634)
chr2 (222-330)||(2057474-2057580)
[»] chr7 (25 HSPs)
chr7 (22-115)||(17869384-17869477)
chr7 (32-107)||(48838601-48838676)
chr7 (26-116)||(40298989-40299079)
chr7 (48-116)||(37815897-37815965)
chr7 (26-110)||(42121693-42121777)
chr7 (26-109)||(33056203-33056286)
chr7 (51-116)||(1742167-1742232)
chr7 (51-116)||(10599539-10599604)
chr7 (59-116)||(35778003-35778060)
chr7 (48-116)||(45933499-45933567)
chr7 (36-110)||(32275356-32275430)
chr7 (39-109)||(40207306-40207375)
chr7 (51-109)||(45948547-45948605)
chr7 (52-109)||(5723163-5723220)
chr7 (59-116)||(6522003-6522060)
chr7 (51-116)||(22298177-22298242)
chr7 (51-116)||(29530845-29530910)
chr7 (59-116)||(36915553-36915610)
chr7 (80-118)||(8603926-8603964)
chr7 (26-88)||(19920223-19920285)
chr7 (51-109)||(44453309-44453367)
chr7 (48-109)||(10684748-10684809)
chr7 (51-116)||(32345746-32345811)
chr7 (48-116)||(19906587-19906655)
chr7 (277-325)||(22660738-22660786)
[»] scaffold0072 (1 HSPs)
scaffold0072 (26-117)||(11993-12084)
[»] scaffold0060 (1 HSPs)
scaffold0060 (26-110)||(31694-31778)
[»] chr6 (13 HSPs)
chr6 (26-117)||(31275552-31275643)
chr6 (51-116)||(1135101-1135166)
chr6 (26-110)||(30627232-30627316)
chr6 (22-89)||(8052481-8052548)
chr6 (26-85)||(12828624-12828683)
chr6 (26-76)||(29927358-29927408)
chr6 (33-74)||(10494681-10494722)
chr6 (26-116)||(23936495-23936585)
chr6 (26-116)||(29915693-29915783)
chr6 (51-109)||(34513577-34513635)
chr6 (276-329)||(9051340-9051392)
chr6 (22-75)||(11785055-11785108)
chr6 (51-116)||(19675154-19675218)
[»] scaffold0565 (1 HSPs)
scaffold0565 (59-116)||(9572-9629)
[»] scaffold0189 (1 HSPs)
scaffold0189 (26-107)||(12989-13070)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-109)||(158241-158322)
[»] scaffold0110 (1 HSPs)
scaffold0110 (48-109)||(24659-24720)
[»] scaffold0015 (1 HSPs)
scaffold0015 (48-116)||(20993-21061)
[»] scaffold0048 (1 HSPs)
scaffold0048 (51-101)||(62809-62859)
[»] scaffold0026 (1 HSPs)
scaffold0026 (58-116)||(4323-4381)


Alignment Details
Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 48259869 - 48259774
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||| | ||||||||| |||||||| ||||||    
T  48259869 ttaataaaagtgttatgtctaacgattatttcattctattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacggagggagtaa 48259774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 50349859 - 50349769
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||  ||||||||||| ||| ||||||||| |||||||| |||||    
T  50349859 taaaagtgttatgtctaatgattatttcattccattccttaatttgtgttcaattggctaaagcaacactcattttgaaacggagggagta 50349769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 28751410 - 28751319
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||| |||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||| | ||||||||| |||| ||| ||||||    
T  28751410 taaaaatgttatgtctaatgattattttatttcattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagtaa 28751319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 15698750 - 15698677
Alignment:
Q  28 aaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttt 101  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||| ||| |||||    
T  15698750 aaagtgttatgtctaatgattatttaattttattccttaatttgtgtgcaattggctaaaacaacacttatttt 15698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 6377288 - 6377204
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||||||||||||||||||||||| |||  |||||||||| | |||| ||||||||||| | | ||||||||||||||||||    
T  6377288 taaaagtgttatgtctaatgattatttcatttcattccttaatttatgtgcaattggctaaagcgacactcattttaaaacggag 6377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 24041026 - 24040936
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||| ||||||||||   |||| ||||||||||| | | ||||||||||||||| || |||||    
T  24041026 taaaagtgttatgtctaatgattatttcattccattccttaatccatgtgaaattggctaaagcgacactcattttaaaacgtagggagta 24040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 84520 - 84440
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaac 106  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||| ||||| | | ||||||||| ||||    
T  84520 taaaagtgttatgtctaatgattatttcattcaattccttaatctgtgtgcaattgactaaagcgacactcattttgaaac 84440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 12851882 - 12851965
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||  |||||||||||||||||  |||||||||| | |||||||||||||||| | | ||| |||||||||||||    
T  12851882 taaaagtgttatacctaatgattattttatttcattccttaatctttgtgtaattggctaaagcgacacttattttaaaacgga 12851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 43105604 - 43105513
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| ||| ||| | ||||||| | | |||||||||||  ||||||||||    
T  43105604 taaaagtgttatgtctaatgattatttcattcaatttcttaatatgcgtgcaatagtctaaaacgacattcattttaaaatagagagagtaa 43105513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 45749501 - 45749418
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||||| |||| | |||| | | |||||||||||||||||    
T  45749501 taaaagtgttatgtctaatgattattttattccattatgtaatatgtgtgcaattagttaaagcgacactcattttaaaacgga 45749418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 15647075 - 15646985
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||| |||||  ||  |||||||||| |||||| ||||| ||||||| | |||||||||||||| ||| |||||    
T  15647075 taaaagtgttatgtctaatgaatatttctttacattccttaatttgtgtgcaattgactaaaacgacactcattttaaaacagagggagta 15646985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 5317579 - 5317496
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| |||  |||||||||| | |||   |||| ||||||| | |||||||||||||||||    
T  5317579 taaaagtgttatgtctaatgattatttcatttcattccttaatctatgtactattgcctaaaacgacactcattttaaaacgga 5317496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 6332317 - 6332392
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttt 101  Q
    ||||||||||||||||||||||||||| |||| ||| |||||| |||||| |||||| |||| | | |||||||||    
T  6332317 taaaagtgttatgtctaatgattatttcattcaatttcttaatttgtgtgcaattggttaaagcgacactcatttt 6332392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 12002396 - 12002471
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttt 101  Q
    ||||||| |||||||| |||||||||| |||  ||||||||||||||||| ||||| ||||||| | |||||||||    
T  12002396 taaaagtattatgtctgatgattatttcatttcattccttaatatgtgtgcaattgtctaaaacgacactcatttt 12002471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 15823207 - 15823266
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| | |||||||||||||||    
T  15823207 tattttattccatttcttaatatgtgtgcaattggctaaaacgatactcattttaaaacg 15823266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 40719165 - 40719248
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||| ||| ||||||||||||||||| |||  |||||||||  |||||| ||||||||||||| | |||||||| ||||||||    
T  40719165 taaaaatgtgatgtctaatgattatttcatttcattccttaacttgtgtgcaattggctaaaacgacactcatttcaaaacgga 40719248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11134437 - 11134372
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||||| | ||||||||| ||| |||| |||||    
T  11134437 tttattccattccttaatatgtgtgcaattggctaaaacgacactcattttgaaatggagggagta 11134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31491745 - 31491680
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||| ||||||| || |||| |||||||| | ||||||||||||||||||||||||    
T  31491745 tttattccattcctgaatatgtttgcaatttgctaaaacgacactcattttaaaacggagagagta 31491680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 37437404 - 37437331
Alignment:
Q  27 aaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattt 100  Q
    |||||||||||||||||||| ||||| |||  ||||||||||||||||| ||| ||||||| | | ||||||||    
T  37437404 aaaagtgttatgtctaatgaatatttcatttcattccttaatatgtgtgcaatgggctaaagcgacactcattt 37437331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 13408321 - 13408246
Alignment:
Q  42 aatgattatttt-attctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||| |||  ||| |||||| |||||| ||||||||||||| | |||||||||||||||||| |||||    
T  13408321 aatgattatttttatttaatttcttaatttgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 13408246  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 30006284 - 30006363
Alignment:
Q  30 agtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||| |||| |||| ||||| |||||| ||||| ||||| | | | ||||||| |||||||    
T  30006284 agtgttatgtctaatgattatttcattcaattcattaatctgtgtgcaattgactaaagcgacattcattttgaaacgga 30006363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 1740615 - 1740553
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagaga 113  Q
    ||||||| |||| |||||||| ||||||||||||||||| | | ||||||| |||||||||||    
T  1740615 tttattccattctttaatatgcgtgtaattggctaaaacgacattcattttgaaacggagaga 1740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 17919822 - 17919741
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgg 108  Q
    |||||||||||||| |||||||||||| |||  |||| ||||| ||| |||||||||||||| | | ||||||||| ||||||    
T  17919822 taaaagtgttatgt-taatgattatttcatttcattcattaatctgtatgtaattggctaaagcgacactcattttgaaacgg 17919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 43929834 - 43929884
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgt 76  Q
    ||||||||||||||||||||||||||| |||| ||| |||||| |||||||    
T  43929834 taaaagtgttatgtctaatgattatttcattcaatttcttaatttgtgtgt 43929884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 48009183 - 48009245
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||  ||||||||||||||||| ||||| ||||||| | ||||||||| ||||||||    
T  48009183 tattttatttcattccttaatatgtgtgcaattgactaaaacgacactcattttgaaacggag 48009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 9915628 - 9915685
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||| ||| |||||||| | ||||||||| |||||||| |||||    
T  9915628 attccttaatatgtgtgttattagctaaaacgacactcattttgaaacggagggagta 9915685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 32806913 - 32806848
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| || |||||||| | | | ||||||| ||||||||||||||    
T  32806913 tttattccattccttaatatgtgtgcaactggctaaagcgacaatcattttgaaacggagagagta 32806848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 49894954 - 49895011
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    |||||||||| |||||||||| |||||| ||||||| ||||| | |||||||||||||    
T  49894954 tattttattccattccttaatctgtgtgcaattggccaaaacgacactcattttaaaa 49895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 1429017 - 1429101
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||||| |||||| ||||||| |||| ||| |||||||| ||||| |    ||||||| | ||||||||||||||||||    
T  1429017 taaaagtgttatatctaataattatttcattcaatttcttaatatatgtgtcaacacctaaaaccacactcattttaaaacggag 1429101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 48320003 - 48319923
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||| |||||||||||||||     |||| ||| ||||||||||||| ||||||||||| | | ||||||||| ||||||||    
T  48320003 taaaagtcttatgtctaatgattc----attccatttcttaatatgtgtgcaattggctaaagcgacactcattttgaaacggag 48319923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 5854201 - 5854143
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||||||| |||||| |||||||||||   | ||||||||| |||||||    
T  5854201 tttattctattccttaatctgtgtgcaattggctaaagtgacactcattttgaaacgga 5854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 26252303 - 26252357
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagaga 113  Q
    |||||||||| |||||| |||||| |||| ||| ||||||||| |||||||||||    
T  26252303 attccttaatctgtgtgcaattggttaaagcaacactcattttgaaacggagaga 26252357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 28200199 - 28200141
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||| |||||| |||||| ||||||||||| | | |||||||||||||||||    
T  28200199 tttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttaaaacgga 28200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 45377149 - 45377071
Alignment:
Q  38 gtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||| |||  ||| |||||| ||||||||||||| |||||| | | ||||||| |||||||| |||||    
T  45377149 gtctaatgatcatttcatttcatttcttaatttgtgtgtaattggttaaaacgacaatcattttgaaacggagggagta 45377071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 40060908 - 40060859
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtg 75  Q
    ||||||||||||||||||| ||||||| |||  ||| |||||||||||||    
T  40060908 taaaagtgttatgtctaatcattatttcatttcatttcttaatatgtgtg 40060859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 43755192 - 43755261
Alignment:
Q  41 taatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||| ||||||| |||| ||||  |||| |||||| ||||||||||| | | ||||||||||||||||||    
T  43755192 taattattatttcattccattctgtaatctgtgtgcaattggctaaagcgacactcattttaaaacggag 43755261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 44583922 - 44583971
Alignment:
Q  27 aaaagtgttatgtctaatgattattttattctattccttaatatgtgtgt 76  Q
    |||| |||||||||||||||||||||||||  ||| |||||| |||||||    
T  44583922 aaaattgttatgtctaatgattattttatttcatttcttaatttgtgtgt 44583971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 46046149 - 46046214
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||| ||||||||||||| |||| ||||||||||||| | | ||||| | |||||||| |||||    
T  46046149 tttattgtattccttaatatatgtgcaattggctaaaacgacattcattctgaaacggagggagta 46046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 31699253 - 31699209
Alignment:
Q  63 cttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    ||||||||||||| |||||| |||||| | |||||||||||||||    
T  31699253 cttaatatgtgtgcaattggttaaaacgacactcattttaaaacg 31699209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 49468689 - 49468621
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||  |||||||||| |||||| ||||||||||| | | ||||||||| ||| |||| |||||    
T  49468689 tattttatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggagggagta 49468621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 50591295 - 50591239
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    ||||||| |||||||||| |||||  ||||||||||| | | |||||||||||||||    
T  50591295 tttattccattccttaatctgtgtacaattggctaaagcgacactcattttaaaacg 50591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 8961037 - 8960954
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  |||||| | |||||||||||||||||    
T  8961037 taaaagtgttatgtctaatgattattttattatattccttaatatatgtgtaattgagtaaaacgacactcattttaaaacgga 8960954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 4751532 - 4751442
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| | |||||||||||||| || ||||||    
T  4751532 taaaagtgttatgtctaatgattatttcatttcattccttaatatgtgtgcaattggctaaaacgacactcattttaaaacagaaagagta 4751442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 24436542 - 24436458
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| | |||| ||||||||||||| | ||||||||||||||||||    
T  24436542 taaaagtgttatatctaatgattatttcattttattccttaatctatgtgcaattggctaaaacgacactcattttaaaacggag 24436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 4742268 - 4742178
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||| |||||||||| |||  ||||||||||||||||| ||||| ||||||| | |||||||||||||| || ||||||    
T  4742268 taaaagtgttatgtctgatgattatttcatttcattccttaatatgtgtgcaattgactaaaacgacactcattttaaaacagaaagagta 4742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 33693881 - 33693964
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||| ||||||| |||||||||||||||||| | ||| |||||||||||||    
T  33693881 taaaagtgttacgtctaatgattatttcattgcattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 33693964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 43257859 - 43257773
Alignment:
Q  29 aagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||||| |||  |||| ||||| |||||| ||||||||||||| | |||||||||||||||||| |||||    
T  43257859 aagtgttatgtctaatgattatttcatttcattctttaatctgtgtgcaattggctaaaac-acactcattttaaaacggagggagta 43257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 4371501 - 4371591
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||| |||||||||||||||||| |||| |||||||||| |||||| |||| | |||||| | ||||||||| |||||||| |||||    
T  4371501 taaaagtgctatgtctaatgattatttcattccattccttaatttgtgtgcaattagttaaaacgacactcattttgaaacggagggagta 4371591  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 12167612 - 12167522
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||||||||||||||| |||| ||| |||||| |||||| |||| |||||| | | ||||||||| ||||||||||||||    
T  12167612 taaaagtgttttgtctaatgattatttcattcaatttcttaatttgtgtgcaattagctaaagcgacactcattttgaaacggagagagta 12167522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 12992204 - 12992280
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttta 102  Q
    ||||||||||||||||||||||||||| |||  |||||||||| ||| || ||||||||||||||| | ||||||||    
T  12992204 taaaagtgttatgtctaatgattatttcatttcattccttaatttgtatgcaattggctaaaacaacattcatttta 12992280  T

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Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 36660576 - 36660667
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||| |||| |||||| | | ||||||||| |||| ||| ||||||    
T  36660576 taaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattagctaaagcgacactcattttgaaacagagggagtaa 36660667  T

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Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 166651 - 166561
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||| |||||||||||||| |||  |||||||||| |||||| ||||||||||  | | ||||||||| |||||||| |||||    
T  166651 taaaagtgttatttctaatgattatttcatttcattccttaatctgtgtgcaattggctaacgcgacactcattttgaaacggagggagta 166561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8336384 - 8336319
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||||||||| |||||||||||||||||| | ||||||||||||| |||| |||||    
T  8336384 tttattccattccttaatatttgtgtaattggctaaaacgacactcattttaaaatggagggagta 8336319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 13066855 - 13066931
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttta 102  Q
    |||||||||| |||||||||||||||| |||  |||||||||| ||| || ||||||||||||||| | ||||||||    
T  13066855 taaaagtgttgtgtctaatgattatttcatttcattccttaatttgtatgcaattggctaaaacaacattcatttta 13066931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 34919886 - 34919961
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttt 101  Q
    ||||| || |||||| |||||||||||||||  |||||||||| |||||||||||||||||| | | |||||||||    
T  34919886 taaaattgctatgtccaatgattattttatttcattccttaatctgtgtgtaattggctaaagcgatactcatttt 34919961  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 38982160 - 38982073
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||| |||| | |||||||| |||  |||||||||| |||||| ||||||||||||| | | ||||||| |||||||    
T  38982160 ttaataaaagtgttacgtcttaagattatttcatttcattccttaatttgtgtgcaattggctaaaacgacattcattttgaaacgga 38982073  T

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Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 26660938 - 26660995
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| ||||||||||| | | |||||||||||||||||| |||||    
T  26660938 attccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 26660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 26932531 - 26932588
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| ||||||||||| | | |||||||||||||||||| |||||    
T  26932531 attccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 26932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 39730122 - 39730187
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||| ||||||| | ||||||||||||||| | ||||||    
T  39730122 tttattccattccttaatatgtgtgcaattgcctaaaacgacactcattttaaaacgaatagagta 39730187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 42104040 - 42103975
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  42104040 tttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 42103975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 7145025 - 7145089
Alignment:
Q  52 ttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||| |||||||||| |||||| ||||||||||| ||| ||||||||| |||||||| |||||    
T  7145025 ttattcaattccttaatttgtgtgcaattggctaaagcaacactcattttgaaacggagggagta 7145089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 36783506 - 36783590
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||| ||||||||||||||||||||| |||  ||  |||||| |||||| ||||||||||| | | ||||||||| ||||||||    
T  36783506 taaaaatgttatgtctaatgattatttcatttcatctcttaatctgtgtgcaattggctaaagcgatactcattttgaaacggag 36783590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 6519161 - 6519211
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||  ||||||| | |||||||||||||||||    
T  6519161 attccttaatatgtgtgtaattaactaaaacgacactcattttaaaacgga 6519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 27652299 - 27652238
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||| ||| |||||| |||||||||||| ||||| | | |||||||||||||||||    
T  27652299 tattttattccatttcttaatctgtgtgtaattgcctaaagcgacactcattttaaaacgga 27652238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 34209061 - 34209098
Alignment:
Q  80 tggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34209061 tggctaaaacaacactcattttaaaacggagagagtaa 34209098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 14620471 - 14620435
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaa 87  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14620471 tttattctattccttaatatgtgtgcaattggctaaa 14620435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 42661920 - 42661861
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    |||||||||  ||||||||||||||||| ||||||||||| | | ||||||||| |||||    
T  42661920 tattttatttcattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacg 42661861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 31557342 - 31557252
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||| | |||||||||||| |||||||| |||||||||||| | |    ||||||| | |||| ||||||||||||| |||||    
T  31557342 taaaagtattatatttaatgattatttcattctatttcttaatatgtgtatcaacacctaaaacgacactcgttttaaaacggagggagta 31557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 34972627 - 34972562
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||  ||||| |||||| ||||||||||| | | |||||||||||||||||| |||||    
T  34972627 tttattccatttattaatctgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 34972562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 39566367 - 39566424
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||||| |||| | | ||||||||| ||| |||| |||||    
T  39566367 attccttaatatgtgtgtaattggttaaagcgacactcattttgaaatggagggagta 39566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 16886220 - 16886304
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||| |||||| ||||||| ||||||| |||  ||||||| || |||| | ||||||||||||| | |||||| |||||| ||||    
T  16886220 taaatgtgttacgtctaataattatttcatttcattccttgatctgtgcgcaattggctaaaacgacactcatgttaaaatggag 16886304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 36296116 - 36296044
Alignment:
Q  44 tgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||  |||| |||||   |||| ||||||||||| | | |||||||||||||||||| |||||    
T  36296116 tgattattttatttcattctttaatccatgtgcaattggctaaagcgacactcattttaaaacggagtgagta 36296044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 31290976 - 31290885
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||| ||||||| |||  |||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||||    
T  31290976 taaaagtgttatgtctaataattatttcatttcattccttaatctgtgtgtaattggctaaaacgacactcattttaaaacggagggagtaa 31290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 44648412 - 44648320
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaac 118  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||| ||||||||||||| | ||||||||| |||||||| |||||||    
T  44648412 taaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacggagggagtaac 44648320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 44676397 - 44676460
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagag 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  44676397 tttattctattccttaatatgtgtgtaattggctaaaacaacactcattttgaaacggagagag 44676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 42857093 - 42857009
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||| ||||||||||||||||||||| |||  |||||||||| |||||||||||| ||||||| | ||||||||||||||||||    
T  42857093 taaaaatgttatgtctaatgattatttcatttgattccttaatctgtgtgtaattgcctaaaacgacactcattttaaaacggag 42857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 25061844 - 25061927
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||| ||| ||||||||| | ||||||||| |||||||    
T  25061844 taaaagtgttatgtctaatgattatttcatttcattccttaatatgtgtgcaatcggctaaaacgacactcatttttaaacgga 25061927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 2568014 - 2567931
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||| |||||||||||||| |||| |||||||||| | |||| ||||||||||||| | | |||||||||||||||    
T  2568014 taaaagtgttatatctaatgattatttcattcaattccttaatctatgtgcaattggctaaaacgacattcattttaaaacgga 2567931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 4476364 - 4476281
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||| ||||||| |||||||||||||||||| | ||| |||||||||||||    
T  4476364 taaaagtgttacgtctaatgattatttcattgcattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 4476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 40049021 - 40049116
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||  ||||| || | |||||| | | ||| |||||||||||||| ||||||    
T  40049021 ttaataaaagtgttatgtctaatgattatttcattccattccttaattcgtgtgcaaatagctaaagcgacactaattttaaaacggagggagtaa 40049116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 42740373 - 42740456
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||| ||||||| |||||||||||||||||| | ||| |||||||||||||    
T  42740373 taaaagtgttacgtctaatgattatttcattgcattctttaatatatgtgtaattggctaaaacgacacttattttaaaacgga 42740456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 53560842 - 53560908
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||| ||||||||||||||| |||||||||||||||| | ||| |||||||||||||||||||||    
T  53560842 tttattttattccttaatatgtatgtaattggctaaaacgacacttattttaaaacggagagagtaa 53560908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 27483195 - 27483116
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||| ||| ||||||| | | |||||||||||||    
T  27483195 taaaagtgttatgtctaatgattatttcatttcattccttaatttgtgtgcaatgggctaaagcgacactcattttaaaa 27483116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 42791447 - 42791530
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||||||||||||||||||| |||  ||||||||||||| ||| ||||||||||||  | ||||||||| |||||||    
T  42791447 taaaagtattatgtctaatgattatttcattacattccttaatatgcgtgcaattggctaaaatgacactcattttgaaacgga 42791530  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 4392046 - 4392140
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaacta 120  Q
    ||||||||||||||||||| ||||||| |||  ||| |||||| ||| || ||||||| ||||| | ||||||||| |||||||| |||||||||    
T  4392046 taaaagtgttatgtctaataattatttcatttcatttcttaatttgtatgcaattggccaaaacgacactcattttgaaacggagggagtaacta 4392140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 5244731 - 5244784
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtg 75  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  5244731 ttaataaaagtgttatgtctaatgattatttcattcaatttcttaatatgtgtg 5244784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 16240718 - 16240801
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||| ||||||||||||||||||||| |||  ||||| |||| |||||| ||| ||||||||| | ||||||||| |||||||    
T  16240718 taaaaatgttatgtctaatgattatttcatttcattccctaatttgtgtgcaataggctaaaacgacactcattttgaaacgga 16240801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 35099377 - 35099294
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| |||   || |||||| |||||| |||| |||||||| | || ||||||||||||||    
T  35099377 taaaagtgttatgtctaatgattatttcatttcgtttcttaatttgtgtgcaatttgctaaaacgacacccattttaaaacgga 35099294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 43580630 - 43580712
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgg 108  Q
    ||||| |||||| | |||||||||||| ||||||||||||||| |||||| ||||||||||| |    |||||||||||||||    
T  43580630 taaaaatgttatatgtaatgattatttcattctattccttaatctgtgtgcaattggctaaagcgtcgctcattttaaaacgg 43580712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 45095686 - 45095771
Alignment:
Q  31 gtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||| |||||||||||| |||| ||||||||||||| ||| |||| |||||| | | | ||||||| |||||||| |||||    
T  45095686 gtgttatgtttaatgattatttcattccattccttaatatgcgtgcaattagctaaagcgacaatcattttgaaacggagggagta 45095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 38165663 - 38165587
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttta 102  Q
    |||||||||||||| |||||||||||| |||  |||||||||| ||| || ||||| ||||||| | ||||||||||    
T  38165663 taaaagtgttatgtttaatgattatttcattacattccttaatctgtatgcaattgactaaaacgacactcatttta 38165587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 46363012 - 46362924
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagag 114  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||| |||  ||| |||| | ||||||||| ||| ||| ||||    
T  46363012 taaaaatgttaggtctaatgattatttcattcaattccttaatatgtgtgcaatacgctgaaacgacactcattttgaaatggatagag 46362924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 52201904 - 52201836
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||  ||||| ||||| ||||||| | || |||||||||| ||||||||||    
T  52201904 tattttattctattccttaatccgtgtgcaattgactaaaacgacacgcattttaaaatggagagagta 52201836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 83446 - 83509
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    |||||||||| ||||||||||||| || |||  |||||||||| |||||| |||||||||||||    
T  83446 taaaagtgttgtgtctaatgattaattcatttcattccttaatttgtgtgcaattggctaaaac 83509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 15514737 - 15514654
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||| ||||||||||||||||||||| |||  |||||||| | | |||| ||||| ||||||| | | |||||||||||||||    
T  15514737 taaaattgttatgtctaatgattatttcattacattccttattttatgtgcaattgactaaaacgacattcattttaaaacgga 15514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 38363967 - 38364038
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaactact 122  Q
    ||||||| |||  ||||| ||| || ||||||||||||| | ||||||||||||||||||||||||| ||||    
T  38363967 tttattccattggttaatctgtatgcaattggctaaaacgacactcattttaaaacggagagagtaagtact 38364038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 41287460 - 41287405
Alignment:
Q  61 tccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| | | ||||||||| |||||||| |||||    
T  41287460 tccttaatatgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 41287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 43599550 - 43599467
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||||||||||||||||||| |||  |||||||||| | |||| ||||   |||||| | |||||||||||||||||    
T  43599550 taaaagtattatgtctaatgattatttcatttcattccttaatttatgtgcaattatataaaacgacactcattttaaaacgga 43599467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 47895310 - 47895259
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||||||||||||| ||||||||||| | | ||||||||||||||||||    
T  47895310 attccttaatatgtgtgcaattggctaaagcgacactcattttaaaacggag 47895259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 30186373 - 30186415
Alignment:
Q  73 gtgtaattggctaaaacaaaactcattttaaaacggagagagt 115  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  30186373 gtgtaattggctaaaacgacactcattttaaaacggagagagt 30186415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 3152773 - 3152716
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||||| ||| |||||    
T  3152773 attccttaatatgtgtgcaattggttaaaacgacactcattttaaaacagagggagta 3152716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 54261593 - 54261658
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||| |||||| |||||||||||||||||| | | ||||||||| |||||||| |||||    
T  54261593 tttattcaatttcttaatctgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 54261658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 647594 - 647502
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaac 118  Q
    ||||| |||||| |||||||||||||| |||  ||| |||||| |||||| |||||| |||||| | ||| ||||| |||| ||| |||||||    
T  647594 taaaactgttatatctaatgattatttcatttcatttcttaatctgtgtgcaattgggtaaaacgacacttattttgaaaccgagggagtaac 647502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 20512474 - 20512406
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| ||| |||||| |||||| ||||| ||||| | | |||||||||||||||||| |||||    
T  20512474 tattttattcaatttcttaatctgtgtgcaattgactaaagcgacactcattttaaaacggagggagta 20512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 36541666 - 36541734
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||  |||||||||||| ||||||||||| |||| | | |||||||||||||| || ||||||    
T  36541666 tattttatttcattccttaatatatgtgtaattggttaaagcgacactcattttaaaacagatagagta 36541734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 44854475 - 44854547
Alignment:
Q  37 tgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||||| |||| |||| ||||| | |||| ||||||||||||| | | ||||||| |||||||    
T  44854475 tgtctaatgattatttcattcaattcattaatctatgtgcaattggctaaaacgacaatcattttgaaacgga 44854547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 49470947 - 49471015
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||| ||||| |||||| ||||   |||||| | ||||||||||||||||||||||||    
T  49470947 tattttattcaattctttaatttgtgtgcaattatttaaaacgatactcattttaaaacggagagagta 49471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 23525290 - 23525231
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||  |||||||||||||||| ||||||||||||| | |||||| || ||||||||    
T  23525290 tttattcccttccttaatatgtgtgcaattggctaaaacgacactcatattgaaacggag 23525231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 790239 - 790313
Alignment:
Q  42 aatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||| |||  ||| |||||||||||||| |  | ||||||||| ||| |||||||||||||| |||||    
T  790239 aatgattatttcattacatttcttaatatgtgtgtcaaagcctaaaacaacactaattttaaaacggagggagta 790313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 1340930 - 1340868
Alignment:
Q  27 aaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    |||||||||||||||||| ||||||| |||| |||| ||||| | |||| |||| ||||||||    
T  1340930 aaaagtgttatgtctaattattatttcattccattctttaatctatgtgcaatttgctaaaac 1340868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 33024274 - 33024209
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||| |||||||||| |||||| ||||||||||||| | | ||||||| |||||||| ||||||    
T  33024274 tttattcaattccttaatttgtgtgcaattggctaaaac-atattcattttgaaacggagggagtaa 33024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 38277936 - 38277994
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||| || ||| ||||||||||||| | ||||||||||||| |||| ||||||    
T  38277936 attccttaatttgagtgcaattggctaaaacgacactcattttaaaatggagggagtaa 38277994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 45213688 - 45213642
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    ||||||||||||||||| ||||||||||| | | |||||||||||||    
T  45213688 attccttaatatgtgtgcaattggctaaagcgacactcattttaaaa 45213642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 54933172 - 54933122
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||| |||| ||||||||||| | | |||||||||||||||||    
T  54933172 attccttaatatatgtgcaattggctaaagcgacactcattttaaaacgga 54933122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 2458192 - 2458249
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| |||||||||||   | ||||||||| |||||||| |||||    
T  2458192 attccttaatatgtgtgcaattggctaaagtgacactcattttgaaacggagggagta 2458249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 42940155 - 42940208
Alignment:
Q  52 ttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    |||||| |||||||| | |||||||||||||||||| | | |||||||||||||    
T  42940155 ttattccattccttagtctgtgtgtaattggctaaagcgacactcattttaaaa 42940208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 27027888 - 27027949
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    |||||||||||||| ||||||||  || |||| ||| ||||||||||||| |||||| ||||||    
T  27027888 taaaagtgttatgtttaatgatt--ttcattccattacttaatatgtgtgcaattggttaaaac 27027949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 38457611 - 38457659
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgt 74  Q
    |||||||||||||| |||||||||||| |||| ||| |||||| |||||    
T  38457611 taaaagtgttatgtgtaatgattatttcattcaatttcttaatttgtgt 38457659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 51398179 - 51398251
Alignment:
Q  44 tgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||| ||||||  ||| |||||| |||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  51398179 tgattactttatttcatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 51398251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 30492867 - 30492957
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||| | ||||||||| |||||||| |||||    
T  30492867 taaaagtgttatgtctaatgattatttcattccattccttaatttgtgtgcaattggctaaaaccacactcattttgaaacggagggagta 30492957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 29840202 - 29840292
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| |||||| | ||||||||| |||||||| |||||    
T  29840202 taaaagtgttatgtctaatgattatttcattccattccttaatttgtgtgcaattgggtaaaacgacactcattttgaaacggagggagta 29840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 22212488 - 22212571
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||  ||||||||||| | | || ||||||||||||||    
T  22212488 taaaagtgttatgtctaatgattatttcatttcattccttaatatgtgttcaattggctaaagcgacacccattttaaaacgga 22212571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 32140991 - 32140901
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||| ||| |||||| |||||  |||||| ||||  || ||||||||| ||||||||||||||    
T  32140991 taaaagtgttatgtctaatgattatttcattcaatttcttaatctgtgtacaattggttaaattaacactcattttgaaacggagagagta 32140901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 29519509 - 29519448
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  29519509 tattttatttcattccttaatatgtgtgtaattggctaaaacgacactcattttaaaacgga 29519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 47321316 - 47321384
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||||||||| |||||| ||||||||||||| | |||||||||||||||||| |||||    
T  47321316 tattttattcaattccttaatctgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 47321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 32140881 - 32140798
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||| |||||||||||| |||  |||||||||| |||||| ||||| ||||||| | ||||||||| |||||||    
T  32140881 taaaagtgttatgtttaatgattatttgatttcattccttaatttgtgtgcaattgactaaaacgacactcattttgaaacgga 32140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 51737327 - 51737237
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||  | ||| ||||| | | ||||||||||||| |||| |||||    
T  51737327 taaaagtgttatgtctaattattatttcattctattccttaatttgtgtacagttgactaaagcgacactcattttaaaatggagggagta 51737237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 42672536 - 42672597
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaa 87  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||| |||||    
T  42672536 taaaagtgttatgtctaatgattatttcattatattccttaatttgtgtgcaattgactaaa 42672597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 50623268 - 50623325
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||    
T  50623268 attccttaatatgtgtgtaattgactaaaacgacactcattttaaaacggagggagta 50623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 36805455 - 36805376
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaac 106  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||| |||| | |||||| | ||||||||||||||    
T  36805455 taaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattag-taaaacgacactcattttaaaac 36805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 56556281 - 56556194
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||||   | |||| |||||||||| |||||| |||||| |||| | | |||||||||||||||||| |||||    
T  56556281 taaaagtgttatgtctaatgatt---tcattcaattccttaatctgtgtgcaattggttaaagcgacactcattttaaaacggagggagta 56556194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 30022214 - 30022293
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    |||||||||||| | ||||||||||||||||  |||||||||| | |||| |||| |||||||| | |||||||||||||    
T  30022214 taaaagtgttatatataatgattattttatttcattccttaatctatgtgcaatttgctaaaacgacactcattttaaaa 30022293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 45889745 - 45889803
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| ||||||| |||||||    
T  45889745 attccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggatagagtaa 45889803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 37654594 - 37654651
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||    
T  37654594 attccttaatatgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 37654651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 45049847 - 45049936
Alignment:
Q  27 aaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||||||| |||  |||||||||| | |||| |||||  ||||||   |||||||||||||| ||| |||||    
T  45049847 aaaagtgttatgtctaatgattatttcatttcattccttaatttatgtgcaattgattaaaacgtcactcattttaaaactgagcgagta 45049936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 52848035 - 52847970
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||| |||||| ||| || ||||||||||||||| |||||||||||||||||| |||||    
T  52848035 tttattcaatttcttaatctgtatgcaattggctaaaacaacactcattttaaaacggagggagta 52847970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 17499698 - 17499630
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||  |||| ||||| |||||| ||||| ||||||| | ||||||||||||||||||||||||    
T  17499698 tattttatttcattcattaatctgtgtgcaattgactaaaacgacactcattttaaaacggagagagta 17499630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 39984990 - 39985058
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||||||||||||| || ||||||||||| | | ||||||||| |||||||| |||||    
T  39984990 tattttattcaattccttaatatgtatgcaattggctaaagcgacactcattttgaaacggagggagta 39985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 18430173 - 18430224
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  18430173 attccttaatatgtgtgcaattggctaaagcaacactcattttgaaacggag 18430224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 31987442 - 31987525
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||| |||||||||||||| ||| ||||  ||||| ||| || ||||  ||||||| | |||||||||||||||||    
T  31987442 taaaagtgttatctctaatgattatttcattttattttttaatttgtatgcaattaactaaaacgacactcattttaaaacgga 31987525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 34096163 - 34096246
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||  ||||| |||||| ||||| ||||||| | |||||| ||||||||||    
T  34096163 taaaagtgttaagtctaatgattatttcatttcattttttaatttgtgtgcaattgcctaaaacgacactcatcttaaaacgga 34096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 45520468 - 45520421
Alignment:
Q  21 cttaataaaagtgttatgtctaatgattattttattctattccttaat 68  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  45520468 cttagtaaaagtgttatgtctaatgattattttattccatttcttaat 45520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 2728379 - 2728321
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||||||||||||||||| ||||||||||| | | ||||||||| |||||||    
T  2728379 tttattcaattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacgga 2728321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 3093491 - 3093537
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaat 68  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  3093491 ttaatgaaagtgttatgtctaatgattattttattcaatttcttaat 3093537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 40010853 - 40010795
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||||||||||||||||||||| | ||||||| | ||||||||| |||||||    
T  40010853 tttattccattccttaatatgtgtgtaatggactaaaacgacactcattttgaaacgga 40010795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 54042167 - 54042105
Alignment:
Q  48 tattttattctattccttaat-atgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||| ||| |||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  54042167 tattttattccatttcttaattatgtgtgcaattggctaaaacgacactcattttaaaacgga 54042105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 30616043 - 30615990
Alignment:
Q  277 ccctacatataacaatgtattatccatgtcaattgagctatactcacggagaca 330  Q
    |||| |||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  30616043 ccctgcatataacaatgcattgtccatgtcaattgagctatgctcacggggaca 30615990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 52957771 - 52957706
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||||||| |||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  52957771 tttattccattccttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagtgagta 52957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 42605745 - 42605813
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||| ||||| ||||| |||||| ||||| ||||||| |  ||||||||||||||||| |||||    
T  42605745 tattttattttattctttaatctgtgtgcaattgactaaaacgacgctcattttaaaacggagtgagta 42605813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 38692528 - 38692611
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||| | | |||||||||| |||  |||||||||| | | || ||||||||||||||| | ||| |||||||||||    
T  38692528 taaaagtgttatctttgatgattatttcatttcattccttaatttatatgcaattggctaaaacaacattcactttaaaacgga 38692611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 54092096 - 54092179
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| |||||| |||||| ||||| |||  |||||||||| ||| || |||||  |||||| | |||||||||||||||||    
T  54092096 taaaagtattatgtttaatgactatttcatttcattccttaatttgtatgcaattgattaaaacgacactcattttaaaacgga 54092179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 2493286 - 2493336
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||| ||||||| ||||| | ||||||||| |||||||    
T  2493286 attccttaatatgtgtgcaattggcaaaaacgacactcattttgaaacgga 2493336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 53814470 - 53814420
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||||||  ||||| |||||| | |||||||||||||||||    
T  53814470 attccttaatatgtgtgcgattggttaaaacgacactcattttaaaacgga 53814420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 20448215 - 20448251
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaa 87  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  20448215 tttattcaattccttaatatgtgtgcaattggctaaa 20448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 49080458 - 49080394
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagt 115  Q
    |||||| |||||||||||||||||| |||||| |||| | | ||| ||||| |||||||| ||||    
T  49080458 tttattttattccttaatatgtgtgcaattggataaagcgacacttattttgaaacggagggagt 49080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 56423004 - 56422916
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagag 114  Q
    |||||| ||||| || ||||||||||| |||| ||| |||||| ||||||| |  | ||||| | | ||||||||| ||||||||||||    
T  56423004 taaaagcgttatatccaatgattatttcattcgatttcttaatctgtgtgtcaaagcctaaagcgacactcattttgaaacggagagag 56422916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 38329057 - 38328966
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||| ||||| | ||||||||||| |||||||| ||||||    
T  38329057 taaaagtgttatgtctaatgattatttcattccattccttaatctgtgtgcaattgactaaagcgaaactcattttgaaacggagggagtaa 38328966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 9022546 - 9022636
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||||||||| || |||| |||  ||||| |||||| ||||||||||||| | |||||||||||||||||| |||||    
T  9022546 taaaagtgttatgtctaatgattaattcattccattttttaatctgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 9022636  T

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Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 156366 - 156449
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    ||||||||||||||||||||||||||||||| |||  | |||||||| | |||||||||  ||||||||| |||||||||||||    
T  156366 ttaataaaagtgttatgtctaatgattatttcatttcaatccttaatttatgtgtaattaactaaaacaacactcattttaaaa 156449  T

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Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 36915523 - 36915605
Alignment:
Q  34 ttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||| |||| |||||||||| ||| || |||||| |||||| | |||||||||||||||||| |||||    
T  36915523 ttatgtctaatgattatttcattccattccttaatctgtatgcaattggttaaaacgacactcattttaaaacggagggagta 36915605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 37185664 - 37185578
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaa---aacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| | |||| ||||| ||||   ||||| |||||||||||||||||    
T  37185664 taaaagtgttatgtctaatgattatttcattctataccttaatttatgtgcaattgactaaaacaacaacactcattttaaaacgga 37185578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 2812926 - 2813005
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    ||||||||||||||||||||||||||| |||| ||| |||||| ||| || ||||||||||||| | | |||||||||||    
T  2812926 taaaagtgttatgtctaatgattatttcattcaattacttaatttgtatgcaattggctaaaacgacattcattttaaaa 2813005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 8382489 - 8382406
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||||||| ||||||||||||  |||| ||||| | |||| |||| |||||||| | |||||||||||||||||    
T  8382489 taaaagtgttatgtctaacgattattttatttcattctttaatttatgtgcaattagctaaaacgacactcattttaaaacgga 8382406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 32326727 - 32326644
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||||||||| |||||| ||||| ||||| | | |||||||||||||||||    
T  32326727 taaaagtgttacgtctaatgattatttcatttcattccttaatctgtgtgcaattgactaaagcgacactcattttaaaacgga 32326644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 41414982 - 41415065
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||||||||||| |||  |||||||||||| |||| ||||||||||||| | | | |||||||||||||    
T  41414982 taaaagtgttacgtctaatgattatttcatttcattccttaatatatgtgcaattggctaaaacgacatttattttaaaacgga 41415065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 8106894 - 8106800
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||| |||||||||||||||||| |||  |||| ||||| |||||| ||||| ||||| | | ||||||||||||| |||| |||||    
T  8106894 ttaataaaagtgctatgtctaatgattatttcatttcattctttaatttgtgtgcaattgactaaatcgatactcattttaaaatggagggagta 8106800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 45187298 - 45187237
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaa 87  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||||||||    
T  45187298 taaaagtgtcatgtctaatgattatttcattatattccttaatctgtgtgcaattggctaaa 45187237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 39970466 - 39970545
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    |||||||| |||||||||||||||||| |||  |||| ||||| | |||| ||||||||||||| | |||||||||||||    
T  39970466 taaaagtggtatgtctaatgattatttcatttcattctttaatttatgtgcaattggctaaaacgacactcattttaaaa 39970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 22601285 - 22601346
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaa 87  Q
    |||||| |||||||||||||||||||| ||| ||||| |||||||||||  |||||||||||    
T  22601285 taaaagagttatgtctaatgattatttcattttattcattaatatgtgtacaattggctaaa 22601346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27109822 - 27109773
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtg 75  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  27109822 taaaagtgttatatctaatgattatttcattctatttcttaatatgtgtg 27109773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 39463433 - 39463498
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  39463433 tttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 39463498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 6839357 - 6839441
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||||||||||||||||||||||| |||| |||  ||||| |||||  ||| || |||||| | ||||||||| ||||||||    
T  6839357 taaaagtgttatgtctaatgattatttcattccattttttaatctgtgtacaatgggttaaaacgacactcatttttaaacggag 6839441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 32661449 - 32661508
Alignment:
Q  29 aagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaa 88  Q
    ||||| ||||||||||||||||||||||  |||||||||| |||||| ||||| ||||||    
T  32661449 aagtgatatgtctaatgattattttatttcattccttaatttgtgtgcaattgactaaaa 32661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 9304614 - 9304552
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||| ||| |||| |||||||| ||||||||||||  | ||||||||||||||||||    
T  9304614 tattttattcaatttcttattatgtgtgcaattggctaaaatgacactcattttaaaacggag 9304552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 29025726 - 29025664
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagaga 113  Q
    ||||||||||||||||||||||||| |||||  |||||| | ||||||||| | |||||||||    
T  29025726 tttattctattccttaatatgtgtgcaattgattaaaacgacactcattttgatacggagaga 29025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 4530043 - 4530100
Alignment:
Q  52 ttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||| |||||| |||||| ||||||||||||| | ||||||||| |||||||    
T  4530043 ttattctatttcttaatctgtgtgcaattggctaaaacgacactcattttgaaacgga 4530100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 34168189 - 34168124
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||  ||||||||||||||||| | | ||||||||| |||||||| |||||    
T  34168189 tttattcaattccttaatccgtgtgtaattggctaaagcgacactcattttgaaacggagggagta 34168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 3095515 - 3095452
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    ||||||||| || | |||||||||||| ||||||||  ||||| |||||||||||| |||||||    
T  3095515 taaaagtgtcatatttaatgattatttcattctattttttaatttgtgtgtaattgactaaaac 3095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 2803261 - 2803167
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||||||||| |||||||||||| |||  |||||  ||| |||||| |||| | |||| | | ||| ||||| ||||||| ||||||    
T  2803261 ttaataaaagtgttatgtataatgattatttcatttcattccaaaatttgtgtgcaattagttaaagcgacacttattttgaaacggatagagta 2803167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 17921130 - 17921192
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||| ||||||||||||||||| |||||||| || ||| | | ||||| ||||||||    
T  17921130 tattttattcaattccttaatatgtgtgcaattggcttaagcaacattaattttgaaacggag 17921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 52
Target Start/End: Original strand, 30789081 - 30789111
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattt 52  Q
    |||||||||||||||||||||||||||||||    
T  30789081 ttaataaaagtgttatgtctaatgattattt 30789111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 41790147 - 41790101
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaat 68  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| |||||    
T  41790147 ttaataaaagtattatgtctaatgattatttcattttattcattaat 41790101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 43561327 - 43561293
Alignment:
Q  82 gctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| ||||||||||||||||||||||||    
T  43561327 gctaaaacaatactcattttaaaacggagagagta 43561293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 32061461 - 32061412
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtg 75  Q
    |||||||||||||||| ||||||||||  ||| ||| |||||||||||||    
T  32061461 taaaagtgttatgtctgatgattatttcgttcaatttcttaatatgtgtg 32061412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 40987284 - 40987194
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||| |||  |||||| | | |||||||||||||||||| |||||    
T  40987284 taaaagtgttatgtctaatgattatttcatttcattccttaatatgtgtgcaatgagctaaagcgacactcattttaaaacggagggagta 40987194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 6592106 - 6592189
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||||||||||| |||  ||||||||||  |||| ||||||| |||||| |  ||||||||||||||||    
T  6592106 taaaagtgttatgtctaatgattatttcatttcattccttaattcgtgtctaattggttaaaacgactctcattttaaaacgga 6592189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 14378250 - 14378159
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||| |  ||||||||||| ||||||||| ||||  |||||| |||| |||||| | | |||||||||||||||||||||||||    
T  14378250 taaaagtgttatattaaatgattatttcattctattcattaaactgtgtgcaattagctaaagcgacactcattttaaaacggagagagtaa 14378159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 24775339 - 24775422
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||| |||||||||||||| |||| || ||||||| |||||| ||||| ||||||| | |||||| ||||||||||    
T  24775339 taaaagtgttatatctaatgattatttcattcaataccttaatttgtgtgcaattgactaaaacgacactcatcttaaaacgga 24775422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 42970039 - 42970122
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| ||||||| ||||||| |||  |||||||||||| |||| ||||||||||||| | ||| |||||||||||||    
T  42970039 taaaagtgttacgtctaataattatttcattgcattccttaatatatgtgcaattggctaaaacgacacttattttaaaacgga 42970122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 8774225 - 8774286
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  8774225 tattttattacattccttaatatgtgtgcaattgactaaaacaacactcattttaaaacgga 8774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 7743544 - 7743634
Alignment:
Q  19 aacttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||| |||||||||||| ||| |||||||||| |||  |||| ||||| |||||| ||||||||||| | | ||||||||| |||||||    
T  7743544 aacttagtaaaagtgttatatctgatgattatttcatttaattctttaatctgtgtgaaattggctaaagcgacactcattttgaaacgga 7743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 441208 - 441143
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||||||| |||||| ||||||||||||| | ||||||||| |||||||| |||||    
T  441208 tttattccattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4133198 - 4133263
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  4133198 tttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 4133263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 8789410 - 8789349
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||| ||||||||| |||||||    
T  8789410 tattttatttcattccttaatatgtgtgcaattgtctaaaacaacactcatttttaaacgga 8789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 16807494 - 16807429
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||| |||||||||||| ||||||||||| | | |||||||||||||||||| |||||    
T  16807494 tttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 16807429  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 16846775 - 16846710
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||| |||||||||||| ||||||||||| | | |||||||||||||||||| |||||    
T  16846775 tttattccattcattaatatgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 16846710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 36360377 - 36360293
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    ||||||||||||||||||||||||||| |||  |||| ||||| || ||| ||||| ||||| | | ||||||||||||| ||||    
T  36360377 taaaagtgttatgtctaatgattatttcatttcattctttaatttgcgtgcaattgactaaagcgacactcattttaaaatggag 36360293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 1360318 - 1360397
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaa 105  Q
    ||||||||| ||| |||||||||||||||||| ||| |||||| |||||| ||||  ||||||| | | |||||||||||    
T  1360318 taaaagtgtcatggctaatgattattttattccattacttaatttgtgtgcaattaactaaaacgacattcattttaaaa 1360397  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 1423346 - 1423409
Alignment:
Q  54 attctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||| |||| ||||||| | |||||||| ||||||||| |||||||| ||||||||||||||||    
T  1423346 attccattctttaatatatatgtaattgactaaaacaacactcatttcaaaacggagagagtaa 1423409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 25332747 - 25332814
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaac 118  Q
    ||||||| |||||||||| |||||| |||| |||||| | | |||||||||||||||||| |||||||    
T  25332747 tttattcaattccttaatctgtgtgcaattagctaaagcgacactcattttaaaacggagggagtaac 25332814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 34225908 - 34225983
Alignment:
Q  34 ttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||||||||||| |||  |||||||||| | |||| ||||||||||| | | ||||||||| |||||||    
T  34225908 ttatgtctaatgattatttcatttcattccttaatctatgtgcaattggctaaagcgacactcattttgaaacgga 34225983  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 12342277 - 12342335
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||  |||| ||||||||||||| | |||||||||||||||||| ||||||    
T  12342277 attccttaataaatgtgcaattggctaaaacgacactcattttaaaacggagggagtaa 12342335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 4536712 - 4536773
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaa 87  Q
    |||||||| |||||||||||||||||| |||  |||||||||| | |||| |||||||||||    
T  4536712 taaaagtgatatgtctaatgattatttcatttcattccttaatttatgtgcaattggctaaa 4536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 4566085 - 4566032
Alignment:
Q  64 ttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||| |||||||||||| ||||| | | |||||||||||||||||||||||||    
T  4566085 ttaatctgtgtgtaattgactaaagcgacactcattttaaaacggagagagtaa 4566032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 45081886 - 45081825
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||  ||||||||||||||||| ||||  ||||||| | |||||||||||||||||    
T  45081886 tattttatttcattccttaatatgtgtgcaattttctaaaacgacactcattttaaaacgga 45081825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 45147984 - 45147911
Alignment:
Q  33 gttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaac 106  Q
    |||||||||||||||||||| |||  |||| ||||| | |||||||||||||||||| | | | ||||||||||    
T  45147984 gttatgtctaatgattatttcattacattcattaatctatgtgtaattggctaaaacgacatttattttaaaac 45147911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 30855278 - 30855346
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| ||||||||||||| ||| |||||| |||| | | ||||||||| |||||||| |||||    
T  30855278 tattttattcaattccttaatatgcgtgcaattggttaaagcgacactcattttgaaacggagggagta 30855346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 44228616 - 44228708
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtg-taattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||| |||||||||||||| |||| |||  |||||  |||||  ||||||||||| | | | |||||||||||||||| ||||||    
T  44228616 taaaagtgttatatctaatgattatttcattccattttttaatccgtgtgcaaattggctaaagcgacattcattttaaaacggagggagtaa 44228708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 11171893 - 11171940
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtg 73  Q
    ||||||||||||||||| |||||||||||||| ||| |||||| ||||    
T  11171893 taaaagtgttatgtctattgattattttattcaatttcttaatttgtg 11171940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 29396649 - 29396590
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaac 118  Q
    |||||||||| |||||| ||||||||||||| | ||||||||| |||| ||| |||||||    
T  29396649 attccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagtaac 29396590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 29795201 - 29795138
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    ||||||| ||||||||||||||||||| |||| |||| ||||| || ||| ||||| |||||||    
T  29795201 taaaagtattatgtctaatgattatttcattccattcattaatctgcgtgcaattgactaaaac 29795138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 775861 - 775799
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagaga 113  Q
    |||||||||||||||||| ||| || ||||||||||| | | | ||||||||||| |||||||    
T  775861 tttattctattccttaatctgtatgcaattggctaaagcgacattcattttaaaagggagaga 775799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 13562177 - 13562235
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||| ||||| | ||||| | ||||||||||||| |||| ||||||    
T  13562177 attccttaatatgtgtgcaattgacaaaaacgacactcattttaaaatggagggagtaa 13562235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 25383462 - 25383404
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| |||||||||| || ||| ||||||||||| | | |||||||||||||||||    
T  25383462 tttattccattccttaatttgcgtgcaattggctaaagcgacactcattttaaaacgga 25383404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 36106372 - 36106314
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    |||||||||||||| || |||| |||||| | | |||||||||||||||||| ||||||    
T  36106372 attccttaatatgtatgcaatttgctaaagcgacactcattttaaaacggagtgagtaa 36106314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 42005066 - 42005124
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| |||||||||||| |||| |||| |||||||| | ||| |||||||||||||    
T  42005066 tttattcaattccttaatatatgtgaaattagctaaaacgacacttattttaaaacgga 42005124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 2459950 - 2460015
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||   ||| || |||| |||||  | ||||||||||||||||||||||||    
T  2459950 tttattctattccttaatccatgtatatttggttaaaatgacactcattttaaaacggagagagta 2460015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 38809874 - 38809939
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||  ||||||||| |||||| ||||||||||||| | ||||||||| ||| |||| |||||    
T  38809874 tttattcctttccttaatctgtgtgcaattggctaaaacgatactcattttgaaatggagggagta 38809939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 42753931 - 42753988
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||| |||||||||||||||||||||||| | | | ||||||| ||||||| ||||||    
T  42753931 attctttaatatgtgtgtaattggctaaagcgacagtcattttgaaacggacagagta 42753988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 43388634 - 43388569
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||| |||||| |||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  43388634 tttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 43388569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 330
Target Start/End: Complemental strand, 2057580 - 2057474
Alignment:
Q  222 tagaattcaccttttctaaggtaaattggtggggtgtgcgagatttgacatctatccctacatataacaatgtattatccatgtcaattgagctatactc 321  Q
    ||||||||||||||| |||||| |||  ||||||||| || |||| ||  || | |||| |||||||||||||| ||||| || ||| |||||||| |||    
T  2057580 tagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaactcga-ccctgcatataacaatgta-tatccctgccaactgagctatgctc 2057483  T
Q  322 acggagaca 330  Q
    |||| ||||    
T  2057482 acggtgaca 2057474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 17869384 - 17869477
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagt 115  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||| |||||| ||||| ||||||||| | ||||||| |||| ||| ||||    
T  17869384 ttaataaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattgactaaaacaacattcattttgaaacagagggagt 17869477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 48838676 - 48838601
Alignment:
Q  32 tgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||| |||||| |||||||| ||| |||||||||||    
T  48838676 tgttatgtctaatgattatttcattttattccttaatttgtgtgcaattggttaaaacaacacttattttaaaacg 48838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 40298989 - 40299079
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||| ||| ||||||| |||  |||||||||| |||||| ||||||||||||| | ||||||||| |||||||| |||||    
T  40298989 taaaagtgttatgtccaattattatttcatttcattccttaatttgtgtgcaattggctaaaacgacactcattttgaaacggagggagta 40299079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 37815897 - 37815965
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||| |||||||||||| ||||||||||||| | |||||||||||||||||| |||||    
T  37815897 tattttattccattctttaatatgtgtgcaattggctaaaacgacactcattttaaaacggagggagta 37815965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 42121693 - 42121777
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||| |||||||||||||||||| |||  |||||||||| |||||| ||||||||||| | | ||||||||| ||| ||||    
T  42121693 taaaagtgatatgtctaatgattatttgatttcattccttaatctgtgtgcaattggctaaagcgacactcattttgaaatggag 42121777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 33056286 - 33056203
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||| |||||||||||| |||  |||||||||| | |||| ||||| ||||||| | ||||||||| |||||||    
T  33056286 taaaagtgttatgtttaatgattatttcatttcattccttaatctatgtgcaattgactaaaacgacactcattttgaaacgga 33056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 1742167 - 1742232
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  1742167 tttattccattccttaatatgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 1742232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 10599539 - 10599604
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||||||||| |||| |||||  |||||| | ||||||||||||||||||||||||    
T  10599539 tttattccattccttaatatatgtgcaattgattaaaacgacactcattttaaaacggagagagta 10599604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 35778003 - 35778060
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||| |||| |||||| | | ||||||||||||||||||||||||    
T  35778003 attccttaatatgtgtgcaattagctaaagcgatactcattttaaaacggagagagta 35778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 45933567 - 45933499
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||||||||| |||||| || |||||||| | | |||||||||||||||||| |||||    
T  45933567 tattttattcaattccttaatctgtgtgcaagtggctaaagcgacactcattttaaaacggagggagta 45933499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 32275356 - 32275430
Alignment:
Q  36 atgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||| |||||||||||| |||  ||| ||||||||||||| |||||| |||||| |  |||||||||||||||||    
T  32275356 atgtttaatgattatttcatttcatttcttaatatgtgtgcaattggttaaaacgacgctcattttaaaacggag 32275430  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 40207375 - 40207306
Alignment:
Q  39 tctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||||||  |||| || |||||||||||||| ||||||||||| ||| ||||||||| |||||||    
T  40207375 tctaatgattattc-attcaataccttaatatgtgtgcaattggctaaagcaacactcattttgaaacgga 40207306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 45948605 - 45948547
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| | |||||||||||| |||| ||||||| | |||||||||||||||||    
T  45948605 tttattctatttcgtaatatgtgtgtgattgactaaaacgacactcattttaaaacgga 45948547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 5723163 - 5723220
Alignment:
Q  52 ttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||| ||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  5723163 ttattttattccttaatttgtgtgcaattgactaaaacgacactcattttaaaacgga 5723220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 6522003 - 6522060
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| |||||| ||||||||||| | | |||||||||||||||||| |||||    
T  6522003 attccttaatttgtgtgcaattggctaaagcgacactcattttaaaacggagggagta 6522060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 22298177 - 22298242
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| |||||||||| |||||| ||||||||||||| | ||||||||| |||| ||| |||||    
T  22298177 tttattccattccttaatctgtgtgcaattggctaaaacgacactcattttgaaacagagggagta 22298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 29530910 - 29530845
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||| ||||||||||| |||||| ||||||||||| | | ||||||||||||||| || |||||    
T  29530910 tttattttattccttaatctgtgtgcaattggctaaatcgacactcattttaaaacgaagggagta 29530845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 36915553 - 36915610
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| | |||| || |||||||||| | ||||||||||||||||||||||||    
T  36915553 attccttaatctatgtgaaaatggctaaaacgacactcattttaaaacggagagagta 36915610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 8603964 - 8603926
Alignment:
Q  80 tggctaaaacaaaactcattttaaaacggagagagtaac 118  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  8603964 tggctaaaacgacactcattttaaaacggagagagtaac 8603926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 19920285 - 19920223
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaa 88  Q
    ||||||||| ||||||||||||||||| |||  |||||||||| ||| || ||||| ||||||    
T  19920285 taaaagtgtcatgtctaatgattatttcatttcattccttaatttgtatgcaattgactaaaa 19920223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 44453309 - 44453367
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| |||| ||||| ||| || ||||||||||||| | |||||||||||||||||    
T  44453309 tttattccattctttaatctgtatgcaattggctaaaacgacactcattttaaaacgga 44453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 10684809 - 10684748
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||| ||||||||||||| ||||||||||  |||||| | ||| ||||| |||||||    
T  10684809 tattttattttattccttaatatatgtgtaattgattaaaacgacacttattttgaaacgga 10684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 32345811 - 32345746
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||| |||||| |||||| ||||||||||| | | ||||||||| |||||||| |||||    
T  32345811 tttattcaatttcttaatctgtgtgcaattggctaaagcgacactcattttgaaacggagggagta 32345746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 19906587 - 19906655
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||| ||||||||||   |||| ||||||||||| | | ||||||||| |||||||| |||||    
T  19906587 tattttattccattccttaatccatgtgcaattggctaaagcgacactcattttgaaacggagggagta 19906655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 22660786 - 22660738
Alignment:
Q  277 ccctacatataacaatgtattatccatgtcaattgagctatactcacgg 325  Q
    ||||||||||||||||| ||||||| |||||| ||| |||| |||||||    
T  22660786 ccctacatataacaatgcattatccctgtcaactgaactatgctcacgg 22660738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 12084 - 11993
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||||||||||||||||||| |||| |||||||||| | |||| |||| |||||| | | ||||||||| |||||||| ||||||    
T  12084 taaaagtgttatgtctaatgattatttcattccattccttaatctctgtgcaattcgctaaagcgacactcattttgaaacggagggagtaa 11993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 31694 - 31778
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||||| |||||||||||||| |||  |||| ||||| |||||| ||||||||| ||||| ||||||||| ||||||||    
T  31694 taaaagtgttatctctaatgattatttcatttcattcgttaatttgtgtgcaattggctacaacaacactcattttgaaacggag 31778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 31275643 - 31275552
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagtaa 117  Q
    ||||||||||| |||||||| |||||| |||   ||||||||| |||||| ||||||||||||||| ||| ||||| |||||||| ||||||    
T  31275643 taaaagtgttacgtctaatggttatttcatttctttccttaatctgtgtgcaattggctaaaacaacacttattttgaaacggagggagtaa 31275552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 1135101 - 1135166
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||| ||||||||||| ||| ||| ||||| ||||||||||||||    
T  1135101 tttattccattccttaatatgtgtgcaattggctaaagcaacacttattttgaaacggagagagta 1135166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 30627232 - 30627316
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggag 110  Q
    |||||||||||| |||||||||||||| |||  |||| ||||| |||||| ||||  ||||||| | ||||||||||||||||||    
T  30627232 taaaagtgttatatctaatgattatttcatttcattcattaatttgtgtgcaattatctaaaacgacactcattttaaaacggag 30627316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 8052481 - 8052548
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaac 89  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||||| |||||| ||||| |||||||    
T  8052481 ttaataaaagtgttatgtctaatgattatttcatttcatttcttaatttgtgtgcaattgactaaaac 8052548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12828683 - 12828624
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggcta 85  Q
    ||||||||||||||||||||||||||| |||  |||| ||||| |||||| |||||||||    
T  12828683 taaaagtgttatgtctaatgattatttcatttcattcattaatttgtgtgcaattggcta 12828624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 29927358 - 29927408
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgt 76  Q
    ||||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  29927358 taaaagtgttatgtctaatgattatttcattctattttttaatctgtgtgt 29927408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 10494722 - 10494681
Alignment:
Q  33 gttatgtctaatgattattttattctattccttaatatgtgt 74  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  10494722 gttatgtctaatgattatttcattctatttcttaatatgtgt 10494681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 23936585 - 23936495
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||| |||||| |||||||||||||| |||| ||| ||||||||||||   |    ||||||| | |||||||||||||||||| |||||    
T  23936585 taaaaatgttatatctaatgattatttcattccatttcttaatatgtgtcccaacacctaaaacgacactcattttaaaacggagggagta 23936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 29915693 - 29915783
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||||||||||| |||||| ||||||| |||| ||| |||||||||||||  |    ||||||||| | ||||||| |||||||| |||||    
T  29915693 taaaagtgttatttctaattattatttcattcaatttcttaatatgtgtgccaacacctaaaacaacattcattttgaaacggagggagta 29915783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 34513635 - 34513577
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||| ||| ||||||||||||| |||| |||||||| | ||| |||||||||||||    
T  34513635 tttattccatttcttaatatgtgtgcaattagctaaaacgacacttattttaaaacgga 34513577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 9051340 - 9051392
Alignment:
Q  276 tccctacatataacaatgtattatccatgtcaattgagctatactcacggagac 329  Q
    |||||||||||||||||| || |||| || |||||||||||| |||||||||||    
T  9051340 tccctacatataacaatgcat-atccttgccaattgagctatgctcacggagac 9051392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 11785108 - 11785055
Alignment:
Q  22 ttaataaaagtgttatgtctaatgattattttattctattccttaatatgtgtg 75  Q
    ||||||||||||||||||||||| | ||||||||| ||||  ||||| ||||||    
T  11785108 ttaataaaagtgttatgtctaataactattttattttattttttaatgtgtgtg 11785055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 19675154 - 19675218
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||| ||||||||||||||||  |||||| |||| | | |||||||||||||| |||||||||    
T  19675154 tttattcaattccttaatatgtgttcaattggttaaagcgacactcattttaaaac-gagagagta 19675218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 9629 - 9572
Alignment:
Q  59 attccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  9629 attccttaatatgtgtgtaattggctaaaacgacactcattttgaaacggagggagta 9572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 13070 - 12989
Alignment:
Q  26 taaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacg 107  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||| ||||  ||||||| | | |||| ||||||||    
T  13070 taaaagtgttatgtctaatgattatttcatttcattccttaatctgtgtgcaattaactaaaacgacattcatcttaaaacg 12989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 158241 - 158322
Alignment:
Q  27 aaaagtgttatgtctaatgattattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    ||||||||||| | |||| |||||||||||  |||| ||||| |||||  ||||||||||||| | |||||||||||||||||    
T  158241 aaaagtgttatctttaataattattttatttcattctttaatttgtgtc-aattggctaaaacgacactcattttaaaacgga 158322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 24720 - 24659
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacgga 109  Q
    |||||||||| ||||||||||||||||  || |||||||| | | |||||||||||||||||    
T  24720 tattttattccattccttaatatgtgtacaaatggctaaagcgacactcattttaaaacgga 24659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 21061 - 20993
Alignment:
Q  48 tattttattctattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    ||||||||| ||||||||||| | |||| ||||||||||| | | ||| |||||||||||||| |||||    
T  21061 tattttattttattccttaatctatgtgcaattggctaaagcgacactaattttaaaacggagggagta 20993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 62809 - 62859
Alignment:
Q  51 tttattctattccttaatatgtgtgtaattggctaaaacaaaactcatttt 101  Q
    ||||||| ||||||||||||||||| ||||||||||| | | |||||||||    
T  62809 tttattccattccttaatatgtgtgcaattggctaaagcgacactcatttt 62859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 4323 - 4381
Alignment:
Q  58 tattccttaatatgtgtgtaattggctaaaacaaaactcattttaaaacggagagagta 116  Q
    |||| ||||||||||||||||    || |||||||| ||||||||||||||||||||||    
T  4323 tatttcttaatatgtgtgtaaaaaccttaaacaaaattcattttaaaacggagagagta 4381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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