View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16974_low_31 (Length: 352)

Name: NF16974_low_31
Description: NF16974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16974_low_31
NF16974_low_31
[»] chr8 (49 HSPs)
chr8 (1-352)||(37600902-37601257)
chr8 (1-105)||(25185018-25185122)
chr8 (5-119)||(25198263-25198377)
chr8 (1-118)||(24512181-24512298)
chr8 (1-105)||(41086963-41087066)
chr8 (1-133)||(39543674-39543809)
chr8 (1-97)||(14846935-14847031)
chr8 (1-103)||(37141716-37141818)
chr8 (1-102)||(40602055-40602156)
chr8 (1-105)||(16002737-16002841)
chr8 (1-97)||(43980597-43980693)
chr8 (1-102)||(40517734-40517832)
chr8 (1-103)||(7772502-7772604)
chr8 (1-102)||(24276571-24276670)
chr8 (3-105)||(37956109-37956211)
chr8 (4-118)||(40337208-40337322)
chr8 (1-102)||(24962379-24962480)
chr8 (1-102)||(26878742-26878843)
chr8 (1-102)||(885453-885553)
chr8 (1-102)||(2562744-2562845)
chr8 (1-98)||(38761372-38761469)
chr8 (1-97)||(57202-57298)
chr8 (1-97)||(14577666-14577762)
chr8 (1-89)||(14739433-14739521)
chr8 (1-97)||(31673593-31673688)
chr8 (1-97)||(34882666-34882762)
chr8 (2-104)||(38770202-38770304)
chr8 (5-118)||(38773366-38773480)
chr8 (1-94)||(3006795-3006888)
chr8 (1-102)||(31746419-31746520)
chr8 (1-102)||(36437492-36437593)
chr8 (1-98)||(38203006-38203103)
chr8 (4-97)||(45185284-45185377)
chr8 (1-97)||(1177170-1177265)
chr8 (1-97)||(3113547-3113643)
chr8 (1-97)||(40790785-40790880)
chr8 (36-103)||(4273957-4274024)
chr8 (56-118)||(1769516-1769578)
chr8 (1-97)||(10396244-10396338)
chr8 (1-98)||(12998707-12998804)
chr8 (1-61)||(43191491-43191551)
chr8 (1-59)||(34157951-34158009)
chr8 (1-91)||(45183875-45183965)
chr8 (1-102)||(5191563-5191663)
chr8 (1-98)||(44255448-44255545)
chr8 (1-61)||(12762874-12762934)
chr8 (36-104)||(16644085-16644153)
chr8 (1-97)||(25888591-25888687)
chr8 (1-61)||(36309610-36309670)
[»] chr3 (51 HSPs)
chr3 (1-118)||(40645648-40645765)
chr3 (1-97)||(13084373-13084469)
chr3 (1-118)||(30476015-30476132)
chr3 (5-96)||(41825156-41825247)
chr3 (1-107)||(41727253-41727359)
chr3 (1-102)||(26517230-26517331)
chr3 (1-118)||(29676754-29676871)
chr3 (1-97)||(20945315-20945411)
chr3 (1-97)||(29645353-29645449)
chr3 (1-97)||(50363022-50363118)
chr3 (1-100)||(41308791-41308890)
chr3 (1-118)||(12077758-12077875)
chr3 (1-102)||(14645904-14646005)
chr3 (9-102)||(46435753-46435846)
chr3 (1-97)||(22659575-22659671)
chr3 (1-97)||(31819401-31819497)
chr3 (1-97)||(46048517-46048613)
chr3 (1-119)||(26998868-26998986)
chr3 (1-119)||(27638092-27638210)
chr3 (1-102)||(26121322-26121423)
chr3 (9-102)||(31531448-31531541)
chr3 (1-97)||(37729044-37729140)
chr3 (1-97)||(42891414-42891510)
chr3 (6-97)||(11140700-11140791)
chr3 (1-102)||(11388111-11388212)
chr3 (1-98)||(31474418-31474515)
chr3 (1-97)||(26043014-26043110)
chr3 (5-81)||(29611845-29611921)
chr3 (1-97)||(41739988-41740084)
chr3 (1-97)||(51263077-51263173)
chr3 (1-96)||(44338078-44338172)
chr3 (1-82)||(28477395-28477476)
chr3 (7-104)||(43187114-43187211)
chr3 (1-97)||(44083621-44083718)
chr3 (1-81)||(39617265-39617345)
chr3 (1-96)||(27047193-27047288)
chr3 (9-97)||(11393917-11394005)
chr3 (1-61)||(21932957-21933017)
chr3 (1-97)||(26243467-26243563)
chr3 (3-102)||(52325520-52325619)
chr3 (1-103)||(50092657-50092759)
chr3 (38-112)||(53717578-53717652)
chr3 (1-59)||(54425971-54426029)
chr3 (1-102)||(831375-831476)
chr3 (51-96)||(5504607-5504652)
chr3 (1-102)||(11344548-11344648)
chr3 (1-102)||(25750517-25750618)
chr3 (1-61)||(35055817-35055877)
chr3 (1-97)||(41543622-41543718)
chr3 (9-97)||(42010863-42010951)
chr3 (1-45)||(50524991-50525035)
[»] chr4 (50 HSPs)
chr4 (1-118)||(5448637-5448754)
chr4 (1-118)||(25477200-25477317)
chr4 (1-133)||(52225979-52226111)
chr4 (1-103)||(16070421-16070523)
chr4 (1-107)||(39237602-39237708)
chr4 (1-102)||(28116518-28116619)
chr4 (1-133)||(20262407-20262539)
chr4 (1-102)||(30153235-30153336)
chr4 (5-133)||(48472512-48472641)
chr4 (1-118)||(54438485-54438602)
chr4 (1-105)||(5536485-5536589)
chr4 (5-133)||(52552528-52552656)
chr4 (1-97)||(14602668-14602764)
chr4 (1-97)||(37625138-37625234)
chr4 (2-98)||(50782773-50782869)
chr4 (1-104)||(46729295-46729397)
chr4 (1-99)||(33246510-33246608)
chr4 (4-102)||(52198744-52198842)
chr4 (1-102)||(12624687-12624788)
chr4 (1-102)||(22750855-22750956)
chr4 (1-118)||(32236806-32236923)
chr4 (1-102)||(37175035-37175135)
chr4 (2-94)||(34543701-34543793)
chr4 (1-102)||(29584885-29584986)
chr4 (1-97)||(5932883-5932978)
chr4 (1-97)||(19654424-19654520)
chr4 (1-97)||(41945786-41945881)
chr4 (1-97)||(43509079-43509173)
chr4 (1-97)||(51787767-51787863)
chr4 (1-102)||(20291331-20291432)
chr4 (1-105)||(24072755-24072859)
chr4 (1-97)||(31486484-31486580)
chr4 (1-96)||(39197047-39197143)
chr4 (36-84)||(54359693-54359741)
chr4 (6-97)||(38136351-38136442)
chr4 (8-97)||(13096562-13096650)
chr4 (1-102)||(22651455-22651556)
chr4 (8-97)||(41920058-41920147)
chr4 (1-49)||(7002227-7002275)
chr4 (1-97)||(20185669-20185765)
chr4 (4-105)||(43800786-43800897)
chr4 (1-97)||(56373357-56373453)
chr4 (1-95)||(5416882-5416974)
chr4 (43-97)||(50438892-50438946)
chr4 (1-102)||(3684201-3684302)
chr4 (1-102)||(5167971-5168071)
chr4 (1-105)||(20116440-20116542)
chr4 (1-97)||(31840094-31840188)
chr4 (1-97)||(26203126-26203222)
chr4 (65-105)||(56217100-56217140)
[»] chr1 (60 HSPs)
chr1 (1-118)||(5085101-5085218)
chr1 (1-107)||(25269362-25269468)
chr1 (1-102)||(30898575-30898676)
chr1 (1-107)||(16582518-16582624)
chr1 (1-107)||(33231825-33231931)
chr1 (1-133)||(3143362-3143494)
chr1 (1-104)||(8877760-8877863)
chr1 (1-92)||(28723665-28723756)
chr1 (8-118)||(34696902-34697012)
chr1 (1-118)||(48721880-48721998)
chr1 (1-102)||(20564765-20564866)
chr1 (1-133)||(9675679-9675811)
chr1 (1-133)||(29140666-29140798)
chr1 (1-105)||(44395522-44395626)
chr1 (7-118)||(32047416-32047527)
chr1 (1-102)||(2342894-2342995)
chr1 (1-102)||(8984673-8984774)
chr1 (1-102)||(13723490-13723591)
chr1 (1-102)||(15512793-15512894)
chr1 (1-102)||(24414990-24415091)
chr1 (1-102)||(28948976-28949077)
chr1 (1-97)||(38680470-38680566)
chr1 (5-97)||(44335284-44335376)
chr1 (1-104)||(36084958-36085061)
chr1 (7-89)||(16395566-16395648)
chr1 (1-118)||(5322035-5322152)
chr1 (1-102)||(15179400-15179501)
chr1 (1-102)||(23982604-23982705)
chr1 (1-97)||(25258325-25258421)
chr1 (1-102)||(52141187-52141290)
chr1 (51-118)||(10160693-10160760)
chr1 (5-104)||(30336047-30336146)
chr1 (5-96)||(31807988-31808079)
chr1 (36-102)||(27531089-27531155)
chr1 (39-105)||(28334265-28334331)
chr1 (1-133)||(44652873-44653002)
chr1 (1-98)||(47643536-47643631)
chr1 (1-102)||(4813474-4813575)
chr1 (1-102)||(31305308-31305409)
chr1 (1-118)||(35001282-35001399)
chr1 (1-97)||(32152153-32152249)
chr1 (1-97)||(34102331-34102427)
chr1 (1-97)||(46495304-46495400)
chr1 (1-89)||(51996958-51997046)
chr1 (1-92)||(15911564-15911655)
chr1 (7-102)||(50692399-50692494)
chr1 (3-97)||(44163227-44163321)
chr1 (1-97)||(4817918-4818012)
chr1 (1-97)||(4829718-4829812)
chr1 (9-94)||(13352832-13352917)
chr1 (1-102)||(35365996-35366097)
chr1 (1-102)||(41737115-41737216)
chr1 (1-97)||(10842324-10842418)
chr1 (1-61)||(25063241-25063301)
chr1 (1-61)||(47070973-47071033)
chr1 (1-61)||(47754654-47754714)
chr1 (67-118)||(29302527-29302578)
chr1 (43-105)||(12845040-12845102)
chr1 (1-91)||(46591103-46591193)
chr1 (1-97)||(34331871-34331966)
[»] chr2 (43 HSPs)
chr2 (1-107)||(9718185-9718291)
chr2 (2-105)||(8065086-8065189)
chr2 (1-130)||(31644455-31644584)
chr2 (6-97)||(44274685-44274776)
chr2 (4-118)||(17250977-17251091)
chr2 (1-97)||(41665706-41665802)
chr2 (1-102)||(45214716-45214817)
chr2 (1-137)||(44424551-44424687)
chr2 (1-107)||(34329988-34330094)
chr2 (1-102)||(17663615-17663716)
chr2 (1-102)||(27297568-27297669)
chr2 (1-102)||(28264964-28265065)
chr2 (1-117)||(1246426-1246542)
chr2 (1-98)||(3237716-3237815)
chr2 (1-133)||(15851491-15851623)
chr2 (1-97)||(24774861-24774957)
chr2 (1-104)||(35241721-35241824)
chr2 (5-98)||(28733820-28733911)
chr2 (1-99)||(37355030-37355128)
chr2 (1-102)||(11459144-11459245)
chr2 (1-102)||(26512062-26512163)
chr2 (1-97)||(44421445-44421541)
chr2 (1-88)||(25731199-25731286)
chr2 (1-118)||(35178806-35178923)
chr2 (1-102)||(41865707-41865807)
chr2 (1-97)||(2131753-2131849)
chr2 (36-96)||(13534411-13534471)
chr2 (2-82)||(14420688-14420768)
chr2 (5-97)||(20361979-20362071)
chr2 (1-61)||(38982084-38982144)
chr2 (1-96)||(2048843-2048936)
chr2 (1-84)||(11071677-11071760)
chr2 (1-102)||(43650025-43650126)
chr2 (1-97)||(247656-247752)
chr2 (9-97)||(4398545-4398632)
chr2 (1-61)||(38449727-38449787)
chr2 (1-97)||(40346094-40346190)
chr2 (1-102)||(4033572-4033673)
chr2 (1-102)||(21012844-21012945)
chr2 (36-97)||(27749508-27749569)
chr2 (1-61)||(2521313-2521373)
chr2 (1-61)||(7255633-7255693)
chr2 (1-61)||(14527655-14527715)
[»] chr7 (42 HSPs)
chr7 (1-118)||(4089513-4089630)
chr7 (1-118)||(36116296-36116413)
chr7 (1-105)||(37673725-37673829)
chr7 (1-104)||(1324697-1324800)
chr7 (1-103)||(48610149-48610251)
chr7 (1-102)||(20123441-20123542)
chr7 (1-102)||(26632837-26632938)
chr7 (1-97)||(10685081-10685177)
chr7 (1-97)||(25750364-25750460)
chr7 (1-97)||(37048031-37048127)
chr7 (1-104)||(43465156-43465260)
chr7 (1-105)||(49100659-49100763)
chr7 (5-107)||(18122059-18122161)
chr7 (1-118)||(48767539-48767657)
chr7 (2-102)||(10595113-10595211)
chr7 (1-102)||(21388233-21388334)
chr7 (1-118)||(36726187-36726303)
chr7 (1-98)||(40263706-40263803)
chr7 (1-97)||(2276590-2276686)
chr7 (1-97)||(21809660-21809756)
chr7 (1-97)||(37491632-37491728)
chr7 (1-102)||(48193606-48193707)
chr7 (1-97)||(6376146-6376242)
chr7 (1-97)||(21801069-21801165)
chr7 (1-97)||(46783854-46783950)
chr7 (1-103)||(35128376-35128476)
chr7 (4-102)||(29636057-29636154)
chr7 (1-102)||(23876028-23876129)
chr7 (1-102)||(33181286-33181387)
chr7 (1-97)||(27213483-27213579)
chr7 (1-88)||(5334408-5334495)
chr7 (6-105)||(40211295-40211394)
chr7 (1-98)||(27162917-27163012)
chr7 (1-107)||(35960364-35960470)
chr7 (1-102)||(31373711-31373812)
chr7 (1-97)||(19236080-19236176)
chr7 (1-61)||(21392906-21392966)
chr7 (1-97)||(28663752-28663847)
chr7 (1-97)||(42993201-42993297)
chr7 (11-98)||(40740945-40741032)
chr7 (43-105)||(25098963-25099025)
chr7 (1-42)||(21752579-21752620)
[»] chr5 (35 HSPs)
chr5 (1-133)||(34877626-34877758)
chr5 (1-104)||(25017686-25017789)
chr5 (1-103)||(10933996-10934098)
chr5 (2-107)||(27798142-27798247)
chr5 (1-97)||(27587834-27587930)
chr5 (1-97)||(43060522-43060618)
chr5 (1-118)||(9946370-9946487)
chr5 (1-102)||(10523286-10523387)
chr5 (1-102)||(27642493-27642594)
chr5 (1-105)||(3247286-3247390)
chr5 (1-97)||(35569017-35569113)
chr5 (1-112)||(5845157-5845268)
chr5 (1-96)||(15898475-15898570)
chr5 (1-118)||(36177267-36177384)
chr5 (1-102)||(39690498-39690599)
chr5 (1-97)||(3559039-3559135)
chr5 (2-102)||(21912111-21912211)
chr5 (1-97)||(38972139-38972234)
chr5 (1-97)||(12895221-12895319)
chr5 (1-107)||(4738616-4738722)
chr5 (1-107)||(20946073-20946179)
chr5 (1-133)||(15967124-15967257)
chr5 (1-118)||(21574893-21575009)
chr5 (1-97)||(29866185-29866281)
chr5 (1-89)||(43453986-43454074)
chr5 (1-103)||(4857506-4857612)
chr5 (1-102)||(30348089-30348190)
chr5 (36-100)||(16969367-16969431)
chr5 (1-61)||(19281503-19281563)
chr5 (1-94)||(25690699-25690794)
chr5 (1-97)||(36347613-36347709)
chr5 (1-102)||(4745117-4745219)
chr5 (1-118)||(3631132-3631247)
chr5 (36-97)||(7510602-7510663)
chr5 (1-118)||(40979224-40979341)
[»] chr6 (23 HSPs)
chr6 (1-134)||(34513232-34513365)
chr6 (1-104)||(9461282-9461385)
chr6 (1-97)||(16327119-16327215)
chr6 (1-103)||(11302845-11302947)
chr6 (1-102)||(1763804-1763905)
chr6 (1-97)||(16350517-16350613)
chr6 (1-97)||(22410857-22410953)
chr6 (1-102)||(19838922-19839023)
chr6 (1-97)||(12514599-12514695)
chr6 (1-97)||(30465982-30466078)
chr6 (1-118)||(5895706-5895823)
chr6 (1-97)||(15981790-15981886)
chr6 (1-97)||(31945926-31946022)
chr6 (1-94)||(197465-197558)
chr6 (1-98)||(31536007-31536104)
chr6 (43-105)||(27441766-27441828)
chr6 (36-133)||(4250707-4250804)
chr6 (5-119)||(5084555-5084673)
chr6 (1-97)||(3729385-3729481)
chr6 (1-102)||(6791369-6791468)
chr6 (43-104)||(3307965-3308026)
chr6 (4-97)||(9428163-9428256)
chr6 (1-89)||(20522976-20523064)
[»] scaffold1091 (1 HSPs)
scaffold1091 (1-102)||(1926-2027)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-97)||(214614-214710)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-102)||(99830-99931)
[»] scaffold0003 (1 HSPs)
scaffold0003 (43-105)||(45533-45595)


Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 37600902 - 37601257
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  37600902 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattaattatacttacaacatttcttaaaaaatgtgaaaaaggt 37601001  T
Q  101 aatggatccctatattaaatgacagatggagtagactagatgcattaattatttaatgaacattaaaaatgaaannnnnnngtttataataat-gcagga 199  Q
     |||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||| || |||    
T  37601002 gatgggtccctacattaaatgatagatggagtagaccagatgcattaattatttaatgaacattaaaaatgaaa-atttttgtttataataatggccgga 37601100  T
Q  200 tagagtacaatatttagaaaaaaatagtaatttaactacatacaatgacttttcccgaagt------nnnnnnnnnnnnntctactacattctcgcttat 293  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||                   |||||||||| ||| || ||    
T  37601101 tagagtacaatatttag-agaaaatagtaatttaactacatacaatgacttttcccgaagtaaaataaaaaaataaaaaatctactacatcctcactcat 37601199  T
Q  294 tattataagcaaaaattcaattttagatccattaaacaagtgatatatctctaatatat 352  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37601200 tattataag-aaaaattcaattttagatccattaaacaagtgatatatctctaatatat 37601257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25185122 - 25185018
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  25185122 tttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacacattagttacactgacaacttttcttaagaaatgtgaaaaaggc 25185023  T
Q  101 aatgg 105  Q
    |||||    
T  25185022 aatgg 25185018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 25198377 - 25198263
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    ||||||||||||||||| || ||||||| | |||||||||| ||| || |||||||| ||| ||||||||| |||||||| |||||||||||||||||||    
T  25198377 atacacatacaaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaatg 25198278  T
Q  105 gatccctatattaaa 119  Q
    ||| |||| ||||||    
T  25198277 gatgcctacattaaa 25198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24512181 - 24512298
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||||  | |||||||||| ||| ||||||||||| ||| ||||||||  ||||||||||||||||||||||      
T  24512181 tttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacagacacattaattacactgacaaattttcttaaaaaatgtgaaaaagat 24512280  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  24512281 aatggatgcctacattaa 24512298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41087066 - 41086963
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||    
T  41087066 tttaatacacatacaaacaaaggaaaatttgataatattaacacacaaatcagacacattaattacactgacaatatttcttaagaaatgtg-aaaaggc 41086968  T
Q  101 aatgg 105  Q
    |||||    
T  41086967 aatgg 41086963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 39543674 - 39543809
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttgg---cagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| |||||||    | ||||||| || ||| ||||||||||| ||| || ||||||||||||||| |||| |||||||    
T  39543674 tttaatacacatacaaacaaaagacaatttggtaataatattaacgcacaaaacagacacattaattacacggacaacatttcttaagaaatatgaaaaa 39543773  T
Q  98 ggcaatggatccctatattaaatgacagatggagta 133  Q
    |||||| | | |||| |||||| ||| |||||||||    
T  39543774 ggcaataggtgcctacattaaaggacggatggagta 39543809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14846935 - 14847031
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||| ||| | ||||||| || ||| ||||||||||| ||| || |||||| |||||||||||||||||||||    
T  14846935 tttaatacacatacaaacaaaagacaatatggtaatattaacgcacaaagcagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaa 14847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37141818 - 37141716
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| |||| |||||| ||| ||||||||| ||| ||||||||||||||||| ||    
T  37141818 tttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaactttttttaaaaaatgtgaaaaatgc 37141719  T
Q  101 aat 103  Q
    |||    
T  37141718 aat 37141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40602055 - 40602156
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | ||||||||||||||| |||||||||| ||  ||| | ||| ||||| ||||||||||||||| ||    
T  40602055 tttaatacacatacaaacaaaggataatttagtaatattaacacataaataagacacattaattgcactaataacttttctgaaaaaatgtgaaaaaagc 40602154  T
Q  101 aa 102  Q
    ||    
T  40602155 aa 40602156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 16002737 - 16002841
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| ||||||||||| ||||||||   | |||||||||| ||| | ||||||||| ||| || |||||| |||||||||||||||||||||||     
T  16002737 tttaatacaaatacaaacaaaggataatttcttaatattaacacacaaaactgacacattaattacacagacaacttttcttaaaaaatgtgaaaaagga 16002836  T
Q  101 aatgg 105  Q
    |||||    
T  16002837 aatgg 16002841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43980597 - 43980693
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| |||||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| ||||||||||||    
T  43980597 tttaatacacatacaaacaaatgataatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 43980693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40517832 - 40517734
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| ||| |||||||||   |||  |||||||| ||||||||||||||||||||| ||    
T  40517832 tttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacacat---ttactctgacaacttttcttaaaaaatgtgaaaaatgc 40517736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7772604 - 7772502
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| || ||||| | | |||||||||| ||| ||||||||||| ||| | ||||||| ||||||||||||||| |||||| |    
T  7772604 tttaatacacatacaaataaaggacaatttcgtaatattaacacacaaaacagacacattaattacaatgacaacttttcttaaaaaatgtaaaaaagac 7772505  T
Q  101 aat 103  Q
    |||    
T  7772504 aat 7772502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24276571 - 24276670
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| ||   |||||||||| ||||||| ||||| ||| |||| |||||||||||||||    
T  24276571 tttaatacacatacaaacaaatgacaatttggtaatattaacacacaat--agacacattaattatactaacaactttttttaagaaatgtgaaaaaggc 24276668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 37956211 - 37956109
Alignment:
Q  3 taatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    ||||| ||||||||||||| || || || | | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||| |||    
T  37956211 taatatacatacaaacaaaggacaaattcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaa 37956112  T
Q  103 tgg 105  Q
    |||    
T  37956111 tgg 37956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 40337208 - 40337322
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaat 103  Q
    |||||||||||||||||| || ||||| | | |||||||| | ||| || |||||||| ||||||||| ||| |||| ||| ||||||||||||| ||||    
T  40337208 aatacacatacaaacaaaggacaattttgtaatattaacatacaaaacatacacattaattatactgataacttttcataagaaatgtgaaaaagacaat 40337307  T
Q  104 ggatccctatattaa 118  Q
    |||| |||| |||||    
T  40337308 ggatgcctacattaa 40337322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24962379 - 24962480
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  24962379 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 24962478  T
Q  101 aa 102  Q
    ||    
T  24962479 aa 24962480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26878742 - 26878843
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||| ||||||||||||| || ||||||| | |||||||||| |||  |||||||||| ||| | | ||||| |||||||| |||||||||||||||    
T  26878742 tttaatatacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacattaacaacttttcttaagaaatgtgaaaaaggc 26878841  T
Q  101 aa 102  Q
    ||    
T  26878842 aa 26878843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 885553 - 885453
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||| |||||| | || ||| ||||||||| |||||||| |||||||||||| ||    
T  885553 tttaatacacatacaaacaaaggacaatttgataatattaacacacaaa-cagacataataattacactgacaacttttcttaataaatgtgaaaaaagc 885455  T
Q  101 aa 102  Q
    ||    
T  885454 aa 885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2562744 - 2562845
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||| | ||| ||||||||||| ||| |||||||   |||||||| |||||||||||| ||    
T  2562744 tttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacagtttttcttaagaaatgtgaaaaaagc 2562843  T
Q  101 aa 102  Q
    ||    
T  2562844 aa 2562845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38761372 - 38761469
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| || |||||   | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| |||| ||||||||    
T  38761372 tttaatacacatacaaacaaatgacaatttcataatattaacacacaaaacagacacattaattacactgacaactttttttaataaatatgaaaaag 38761469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 57202 - 57298
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| |||  | ||||| | | |||||||||| ||| ||||||||||| ||| || |||||| |||||||| ||||||||||||    
T  57202 tttaatacacatacaaataaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 57298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14577666 - 14577762
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||  | ||||||| | |||||||| | |||  |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  14577666 tttaatacacatacaaacaaagtacaatttggtaatattaacaaacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14577762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14739521 - 14739433
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaat 89  Q
    ||||||||||| ||||||||| |||||||||| | |||||||| |||||  | |||||||| ||| || |||||| |||||||||||||    
T  14739521 tttaatacacacacaaacaaaggataatttggtaatattaacatataaaataaacacattaattacacggacaacttttcttaaaaaat 14739433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31673688 - 31673593
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| |||||||||| | |||||||| | |||  | |||||||| ||| ||  ||||| |||||||||||||||||||||    
T  31673688 tttaatacacatacaaacaaaggataatttggtaatattaacatacaaaataaacacattaattacac-cacaacttttcttaaaaaatgtgaaaaa 31673593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34882762 - 34882666
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||| |||||||||||||||||||||||||  | |||||||||| |||  |||||||||| ||  | | ||||  |||||||||||||||||||||    
T  34882762 tttaacacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattgcattaacaatttttcttaaaaaatgtgaaaaa 34882666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 38770202 - 38770304
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggca 101  Q
    |||||||||||||||||||| || ||||| | | |||||||||| |||  | |||||||| ||| ||||||||| | |||||| |||| |||||||| ||    
T  38770202 ttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaataaacacattaattacactgacaacttatcttaagaaatatgaaaaagaca 38770301  T
Q  102 atg 104  Q
    |||    
T  38770302 atg 38770304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 38773366 - 38773480
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaac-atttcttaaaaaatgtgaaaaaggcaat 103  Q
    |||||||||||||||||||| ||||| | | | |||||||| ||| ||||||||||| ||  |||||||||  ||| |||| ||||||||||||| ||||    
T  38773366 atacacatacaaacaaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaacttttttttaagaaatgtgaaaaagacaat 38773465  T
Q  104 ggatccctatattaa 118  Q
    || | |||| |||||    
T  38773466 ggttgcctacattaa 38773480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3006795 - 3006888
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaa 94  Q
    ||||||||||||||| | ||| |||||||| | | ||||||||||||||  ||||| |||| ||||||| ||||| |||||||| |||| ||||    
T  3006795 tttaatacacatacagataaatgataatttagtaatattaacacataaaatagacatattaattatactaacaacttttcttaagaaatatgaa 3006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31746419 - 31746520
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||  ||| ||||  |||||||| |||||||||||| ||    
T  31746419 tttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaagaaatgtgaaaaaagc 31746518  T
Q  101 aa 102  Q
    ||    
T  31746519 aa 31746520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36437593 - 36437492
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | | |||||||| |||  |||||||||| ||  ||| |||   |||||||||||||||| |||||||    
T  36437593 tttaatacacatacaaacaaaggacaatttggtaatgttaacacacaaaatagacacattaattgcactaacattttttcttaaaaaatgtggaaaaggc 36437494  T
Q  101 aa 102  Q
    ||    
T  36437493 aa 36437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38203006 - 38203103
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| || ||| |||| ||| || |||||| ||| |||| |||||||||||||    
T  38203006 tttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacatattaattacaccgacaacttttattaagaaatgtgaaaaag 38203103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 45185284 - 45185377
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||| || ||||||  | |||||| ||||||| ||||||||||  ||| |  |||||| |||||||| ||||||||||||    
T  45185284 aatacacatacaaacaaaggacaatttgataatattaatacataaaacagacacatttattacaacgacaacttttcttaagaaatgtgaaaaa 45185377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1177170 - 1177265
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| |||||| ||||| | | |||||| | | ||| ||||||||||| ||| ||| | ||| |||||||||||||||||||||    
T  1177170 tttaatacacatacaaataaaagacaatttcgtaatattaatatacaaaacagacacattaattacact-ataacttttcttaaaaaatgtgaaaaa 1177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3113547 - 3113643
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| |||||||||| ||||||  | |||||||||| ||| |||||| |||| ||| ||||| ||  ||| |||| ||||||||||||    
T  3113547 tttaatacacatataaacaaaagacaatttgataatattaacacacaaaacagacatattaattacactgataattttttttaagaaatgtgaaaaa 3113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40790880 - 40790785
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||| |||| ||||||||||| || ||||||| | |||||| ||| ||| ||||| ||||| ||| ||||||||| |||||||| ||||||||||||    
T  40790880 tttattacatatacaaacaaatgacaatttggtaatattaatacacaaa-cagacgcattaattacactgacaacttttcttaagaaatgtgaaaaa 40790785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 4273957 - 4274024
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaat 103  Q
    |||||||||||||| || |||||||| ||| ||| |||| ||||||||| ||||||||||||| ||||    
T  4273957 tattaacacataaaacaaacacattaattacactaacaatatttcttaagaaatgtgaaaaagacaat 4274024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 1769516 - 1769578
Alignment:
Q  56 acattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatggatccctatattaa 118  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| | ||||||| |||| |||||    
T  1769516 acattaattacactgataacatttcttaaaaaatgtgaaaaaagtaatggatgcctacattaa 1769578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10396244 - 10396338
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  | | |||||| ||| | ||||||| |||||||| ||||||||||||    
T  10396244 tttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaa--acaaacattaattacattgacaacttttcttaataaatgtgaaaaa 10396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 12998707 - 12998804
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| || ||||| | | |||| ||||| |||  |  ||||||| ||  ||||||||| |||||||| |||||||||||||    
T  12998707 tttaatacacatacaaacaaaggacaatttagtaatattcacacacaaaatatgcacattaattgaactgacaacttttcttaagaaatgtgaaaaag 12998804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43191491 - 43191551
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||    
T  43191491 tttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacatta 43191551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34158009 - 34157951
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacat 59  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||    
T  34158009 tttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacat 34157951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45183875 - 45183965
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgt 91  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||||||| || ||| |||  |||   ||||||| |||||||| ||||||    
T  45183875 tttaatacacatataaacaaaggacaatttggtaatattaacacataaaacaaacatatttattactatgacaacttttcttaagaaatgt 45183965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5191563 - 5191663
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||  || ||||||| | |||||||||| ||| ||||||||||| ||   || ||||  |||||||| |||||||||||| ||    
T  5191563 tttaatacacatataaacaatggacaatttggtaatattaacacacaaaacagacacattaatt-gcctaacaatttttcttaagaaatgtgaaaaatgc 5191661  T
Q  101 aa 102  Q
    ||    
T  5191662 aa 5191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44255545 - 44255448
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    |||||||||| |||||||||| || ||||||  | |||||||||| |||  || ||||||| |||  || ||| | |||||||| |||||||||||||    
T  44255545 tttaatacacgtacaaacaaatgacaatttgataatattaacacacaaaaaaggcacattaattacgctcacatcttttcttaacaaatgtgaaaaag 44255448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12762934 - 12762874
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  ||||||||||    
T  12762934 tttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacatta 12762874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 16644085 - 16644153
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    |||||||||| |||  | |||||||| ||| ||| ||||| |||||||| |||||||||||| ||||||    
T  16644085 tattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatg 16644153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25888687 - 25888591
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||| ||  | |||||||| | |||  ||||| |||| ||| ||| ||||| |||||||| |||||| |||||    
T  25888687 tttaatacacatacaaacaaatgacaatatgataatattaacatacaaaatagacatattaattacactaacaacttttcttaagaaatgtaaaaaa 25888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36309610 - 36309670
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| |||  ||||||||||    
T  36309610 tttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacatta 36309670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40645765 - 40645648
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||| ||| ||||||||||| ||| || ||||||||||||||| |||||||||||||||    
T  40645765 tttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattacacagacaacatttcttaagaaatgtgaaaaaggc 40645666  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  40645665 aatggatgcctacattaa 40645648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13084373 - 13084469
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||| ||||||||||||| |||||||| |||| |||||||    
T  13084373 tttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatatgaaaaa 13084469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30476132 - 30476015
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||| ||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  30476132 tttaatagacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggc 30476033  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  30476032 aatgggtgcctacattaa 30476015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 41825156 - 41825247
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||||||||||||||||||||||||||| | ||||||||||||||  |||||||||| ||| ||||||||| |||||||| || ||||||||    
T  41825156 atacacatacaaacaaaagataatttggtaatattaacacataaaatagacacattaattacactgacaacttttcttaagaagtgtgaaaa 41825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41727253 - 41727359
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| |||||||||||||||    
T  41727253 tttaatacacatacaaataaaggacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggc 41727352  T
Q  101 aatggat 107  Q
    |||||||    
T  41727353 aatggat 41727359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26517230 - 26517331
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| || ||||||| | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  26517230 tttaatacacatacaaataaaggacaatttggtaatattaacacagaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaatgc 26517329  T
Q  101 aa 102  Q
    ||    
T  26517330 aa 26517331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29676754 - 29676871
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| |||||| ||||| | | ||||||||||||||  |||||||||| ||| ||||||||  |||||||| |||| ||||||||||    
T  29676754 tttaatacacatacaaataaaagacaatttcgtaatattaacacataaaatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggc 29676853  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  29676854 aatgggtgcctacattaa 29676871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20945315 - 20945411
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| ||||||| || | ||||||||||||||  |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  20945315 tttaatacacatacaaacaaaggataattaggtaatattaacacataaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 20945411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29645449 - 29645353
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| |||| |||||| ||| ||| |||||||||||||| ||||||||||||    
T  29645449 tttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaacatttcttaataaatgtgaaaaa 29645353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 50363118 - 50363022
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||| ||||||| |||||| |||| ||| ||||||||  |||||||||||||||||||||    
T  50363118 tttaatacacatacaaacaaatgacaatttggtaatattaatacataaaacagacatattaattacactgacaatttttcttaaaaaatgtgaaaaa 50363022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41308791 - 41308890
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| |||||||  |||| |||| | |||||||||| ||| ||||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  41308791 tttaatacacatataaacaaagaataaattggtaatattaacacacaaaacagacacattaattacactgacaacattttttaagaaatgtgaaaaaggc 41308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12077758 - 12077875
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||| ||||||||| |||||||| |||| ||||||| ||    
T  12077758 tttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacactgacaacttttcttaagaaatttgaaaaatgc 12077857  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  12077858 aatgggtgcctacattaa 12077875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14645904 - 14646005
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | ||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| ||||||||||||||||||||| ||    
T  14645904 tttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtgaaaaaagc 14646003  T
Q  101 aa 102  Q
    ||    
T  14646004 aa 14646005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 46435753 - 46435846
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    ||||||||||||| || ||||||| | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||||    
T  46435753 acatacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 46435846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22659671 - 22659575
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||  | | |||||| ||||||| ||||| |||||||| |||||| |||||    
T  22659671 tttaatacacatacaaacaaaagataatttggtaatattaacacacaaaataaatacattaattatactaacaacttttcttaagaaatgtaaaaaa 22659575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31819497 - 31819401
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| || || ||| |||||||| ||||||||||||    
T  31819497 tttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacaccgataacttttcttaagaaatgtgaaaaa 31819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46048613 - 46048517
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||| ||| ||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||    
T  46048613 tttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 46048517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26998986 - 26998868
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||| ||||||||||||| ||||| | | |||||||| | |||  ||| |||||| ||||| ||||||| |||||||| |||||||||||||      
T  26998986 tttaatacacgtacaaacaaaagacaatttcgtaatattaacaaacaaaatagatacattaattataatgacaacttttcttaagaaatgtgaaaaagat 26998887  T
Q  101 aatggatccctatattaaa 119  Q
    ||||||| |||| ||||||    
T  26998886 aatggatacctacattaaa 26998868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27638092 - 27638210
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || |||||   | |||||||||| |||  ||| |||||| ||| ||| | ||| |||||||| ||||||||||||||     
T  27638092 tttaatacacatacaaacaaaggacaattttataatattaacacacaaaatagagacattaattacactaataacttttcttaagaaatgtgaaaaaggt 27638191  T
Q  101 aatggatccctatattaaa 119  Q
    ||||||| |||||||||||    
T  27638192 aatggatgcctatattaaa 27638210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26121423 - 26121322
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||| || |||||||| ||| ||||||||| |||||||| |||||| ||||| ||    
T  26121423 tttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtaaaaaatgc 26121324  T
Q  101 aa 102  Q
    ||    
T  26121323 aa 26121322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 31531448 - 31531541
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    |||||||||||||||| ||||||  | ||| |||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||||    
T  31531448 acatacaaacaaaagacaatttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 31531541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37729044 - 37729140
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||||||| ||  | |||||||||| |||  |||||||||| ||||| | ||||  |||||||| ||||||||||||    
T  37729044 tttaatacacatacaaacaaaagataatatgataatattaacacacaaaatagacacattaattatattaacaatttttcttaagaaatgtgaaaaa 37729140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42891510 - 42891414
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| ||||||||||||| || | ||||| | |||||||||| ||| |||||| |||| ||||||| ||||| |||||||| ||||||||||||    
T  42891510 tttaatatacatacaaacaaaggacagtttggtaatattaacacacaaaacagacaaattaattatactaacaacttttcttaagaaatgtgaaaaa 42891414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 11140791 - 11140700
Alignment:
Q  6 tacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||| |||||||||| | || ||||||| ||| || |||||||| ||| ||||| ||| ||||||||| |||||||||||    
T  11140791 tacacatacaaacaaaggataatttggtaatactaacacacaaaacatacacattatttacactgataacttttcttaaacaatgtgaaaaa 11140700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11388212 - 11388111
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||| | ||||||| | |||||||||  |||  |||||||||| ||| ||| ||||  |||||||| |||||||||||| ||    
T  11388212 tttaatacacatacaaacaaaatacaatttggtaatattaacacgcaaaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaaagc 11388113  T
Q  101 aa 102  Q
    ||    
T  11388112 aa 11388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31474515 - 31474418
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| ||||||||   | ||||||| || ||| ||||||||||||||||||  | ||  ||||||||||||||| ||||||    
T  31474515 tttaatacacatacaaacaaatgataatttaataatattaacgcacaaaacagacacattagttataccaaaaaattttcttaaaaaatgtaaaaaag 31474418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26043110 - 26043014
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| |  ||||||||| ||| |||||| |||| ||| ||||||||  |||||||| |||||| |||||    
T  26043110 tttaatacacatacaaacaaaggacaatttggtaacattaacacacaaaacagacatattaattacactgacaatttttcttaagaaatgtaaaaaa 26043014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 29611921 - 29611845
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttct 81  Q
    |||||||||||||||||||||||||||  | |||||||||| |||  |||||||||| ||| ||| |||||||||||    
T  29611921 atacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattacactaacaacatttct 29611845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41739988 - 41740084
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||| ||||||||||||||| |||||||||| | |||||||||| |||  |||||||||| || || | | ||  |||||||||||||||||||||    
T  41739988 tttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattgtattaataatttttcttaaaaaatgtgaaaaa 41740084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51263173 - 51263077
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | || ||||||||||| ||||||||||| ||| ||| ||||  ||| |||| ||||||||||||    
T  51263173 tttaatacacatacaaacaaaggacaatttagtaatactaacacataaaacagacacattaattacactaacaattttttttaagaaatgtgaaaaa 51263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44338172 - 44338078
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||| |||| ||||| ||||  || ||| ||||| ||||||||||||||||||||    
T  44338172 tttaatacacatagaaacaaaggacaatttggtaatattaacacaaaaattagaca-attaactacactaacaacttttcttaaaaaatgtgaaaa 44338078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28477476 - 28477395
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttctt 82  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||| ||| ||||||||||| ||  || |||||| ||||||    
T  28477476 tttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattgcaccgacaacttttctt 28477395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 43187114 - 43187211
Alignment:
Q  7 acacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    ||||||||||||||| || ||||| | | |||||| ||| ||| ||||||||||| ||| | ||||||| ||| |||| |||| ||||||||||||||    
T  43187114 acacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacattgacaactttttttaagaaatatgaaaaaggcaatg 43187211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44083718 - 44083621
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaa-aaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| |||  ||| |||||| ||| | | ||||  |||||||| |||||||||||||    
T  44083718 tttaatacacatacaaacaaatgataatttggtaatattaacacacaaaatagatacattaattacaataacaatttttcttaaaaaaatgtgaaaaa 44083621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39617265 - 39617345
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttct 81  Q
    ||||||||||||||||||||| || ||||| | | |||||||| | ||| ||||||||||| ||| ||||||||| |||||    
T  39617265 tttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacaacttttct 39617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27047193 - 27047288
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||| |||  |||||||||| ||  ||| ||| | ||||||||  ||||||||||    
T  27047193 tttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacagcttttcttaaggaatgtgaaaa 27047288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 11394005 - 11393917
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||| ||| ||| || ||||||  |||||||||||| |||  |||||||||| ||| ||| ||||| ||| |||||||||||||||||    
T  11394005 acatataaataaatgacaatttgatagtattaacacacaaaatagacacattaattacactaacaactttttttaaaaaatgtgaaaaa 11393917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21933017 - 21932957
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||| ||||||||||||||| |||||||||| | |||||||||| |||  ||||||||||    
T  21933017 tttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacatta 21932957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26243563 - 26243467
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || |||||   |  ||||||||| ||| || ||| |||| ||| ||||||||| ||| ||||||||||| |||||    
T  26243563 tttaatacacatacaaacaaatgacaatttaataacattaacacacaaaacaaacatattaattacactgacaaccttttttaaaaaatgtaaaaaa 26243467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 52325520 - 52325619
Alignment:
Q  3 taatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    ||||| ||||| ||||||| || ||||||  | ||||||||||||||  |||||||||| ||| ||| |||   |||||||| |||||||||||| ||||    
T  52325520 taataaacatataaacaaaggacaatttgataatattaacacataaaatagacacattaattacactaacattttttcttaagaaatgtgaaaaatgcaa 52325619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50092759 - 50092657
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| || ||||| | | |||||| ||| ||| |  |||||||| ||| |||| |||| ||| |||| |||||| ||||||||    
T  50092759 tttaatacacatacaaataaaggacaattttgtaatattaatacacaaaaccaacacattaattacactgtcaacttttgttaagaaatgtaaaaaaggc 50092660  T
Q  101 aat 103  Q
    |||    
T  50092659 aat 50092657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 53717578 - 53717652
Alignment:
Q  38 ttaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatggatcccta 112  Q
    |||||||| ||| ||||||||||| ||| | |||||| ||||||||| |||||| ||||||  ||||||| ||||    
T  53717578 ttaacacacaaaacagacacattaattacattgacaatatttcttaagaaatgtaaaaaagataatggatgccta 53717652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 54425971 - 54426029
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacat 59  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||| ||| |||||||||    
T  54425971 tttaatacacatataaacaaatgacaatttggtaatattaacacacaaaacagacacat 54426029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 831375 - 831476
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||  ||  ||  ||||||| ||| | ||||||| |||||||| |||| ||||||| ||    
T  831375 tttaatacacatataaacaaaggacaatttggtaatattaacacgcaatacatgcacattaattacattgacaacttttcttaagaaatatgaaaaatgc 831474  T
Q  101 aa 102  Q
    ||    
T  831475 aa 831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 5504607 - 5504652
Alignment:
Q  51 cagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||| |||||| ||| |||||||||||||||||| |||||||||||    
T  5504607 cagatacattaattacactgacaacatttcttaagaaatgtgaaaa 5504652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11344648 - 11344548
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| || | ||||||||| | | |||||||| |||  |||||||||| ||| ||  | ||| |||||||| |||||||||||| ||    
T  11344648 tttaatacacatacaaaaaaga-ataatttggtaatgttaacacacaaaatagacacattaattacaccaataacttttcttaagaaatgtgaaaaaagc 11344550  T
Q  101 aa 102  Q
    ||    
T  11344549 aa 11344548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25750618 - 25750517
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | || |||| | |||||||||| |||  ||||| |||| ||| | | ||||| |||||||| |||||| ||||| ||    
T  25750618 tttaatacacatacaaacaaagaacaagttggtaatattaacacacaaaatagacaaattaattacattaacaacctttcttaagaaatgtaaaaaaagc 25750519  T
Q  101 aa 102  Q
    ||    
T  25750518 aa 25750517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35055877 - 35055817
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||||||||||| |||| || ||||||| | |||||||||| |||  ||||||||||    
T  35055877 tttaatacacatacaagcaaatgacaatttggtaatattaacacacaaaatagacacatta 35055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41543622 - 41543718
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| |||||| |||||   | ||||| |||| |||  ||||||||||  || || |||||| ||| |||| ||||||||||||    
T  41543622 tttaatacacatacaaataaaagacaattttataatattatcacacaaaatagacacattaaatacacagacaactttttttaagaaatgtgaaaaa 41543718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 42010951 - 42010863
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||  ||||||||  | |||||||||| |||  |||||||||| ||| | | ||||  |||||||| ||||||||||||    
T  42010951 acatacaaacaaagaataatttgataatattaacacacaaaatagacacattaattacattaacaaattttcttaagaaatgtgaaaaa 42010863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50524991 - 50525035
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacaca 45  Q
    ||||||||||||||||||||| || ||||||| | ||||||||||    
T  50524991 tttaatacacatacaaacaaaggacaatttggtaatattaacaca 50525035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5448754 - 5448637
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | |||||||||| ||| ||||||||||| ||||| ||| |||||||||||| |||||||||||||||    
T  5448754 tttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattaattatattgataacatttcttaagaaatgtgaaaaaggc 5448655  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  5448654 aatggatgcctacattaa 5448637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25477317 - 25477200
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  25477317 tttaatacacatacaaacaaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagc 25477218  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  25477217 aatggatgcctacattaa 25477200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 52226111 - 52225979
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||| || ||||||  | |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  52226111 tttaatacacatataaacaaaggacaatttgataatattaacatataaaacagacacattaattatactgacaacatttcttaaaaaatgtgaaaaagac 52226012  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||| | | |||| |||||| ||| || ||||||    
T  52226011 aataggtacctacattaaaggacggagggagta 52225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16070523 - 16070421
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| ||| |||||||||||||||||| | |||||||||| ||| ||||||||||| ||| ||||||| |||||||||| ||||||||||||| |    
T  16070523 tttaatacatatataaacaaaagataatttggtaatattaacacacaaaacagacacattaattacactgacagcatttcttaagaaatgtgaaaaagac 16070424  T
Q  101 aat 103  Q
    |||    
T  16070423 aat 16070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39237602 - 39237708
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| |||| |||||| ||| ||||||||| |||||||||||||||||||||| |    
T  39237602 tttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgacaacttttcttaaaaaatgtgaaaaagac 39237701  T
Q  101 aatggat 107  Q
    |||||||    
T  39237702 aatggat 39237708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28116518 - 28116619
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||  ||||| |||| ||| ||| ||||| ||||||||||||||||||||| ||    
T  28116518 tttaatacacatacaaacaaatgataatttggcaatattaacacacaaaatagacatattaattacactaacaacttttcttaaaaaatgtgaaaaaagc 28116617  T
Q  101 aa 102  Q
    ||    
T  28116618 aa 28116619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 20262407 - 20262539
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||||||    
T  20262407 tttaatacacatacaaacaaataacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaggc 20262506  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||||  |  |||||||||  |||||| ||||||    
T  20262507 aatgagtgtctatattaagggacagagggagta 20262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30153235 - 30153336
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| |||||||||| | ||||| |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  30153235 tttaatacacatacaaataaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaacgc 30153334  T
Q  101 aa 102  Q
    ||    
T  30153335 aa 30153336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 48472512 - 48472641
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttctt-aaaaaatgtgaaaaaggcaat 103  Q
    ||||||||||||| ||| |||||||| | | |||||||||| |||  |||||||||| ||| ||||||||| |||||| |||||||||||||||| ||||    
T  48472512 atacacatacaaagaaaggataatttcgtaatattaacacacaaaatagacacattaattacactgacaacttttcttaaaaaaatgtgaaaaagacaat 48472611  T
Q  104 ggatccctatattaaatgacagatggagta 133  Q
    |||| |||| |||||  |||||||| ||||    
T  48472612 ggatgcctacattaagggacagatgaagta 48472641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 54438602 - 54438485
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| |||||||| | | |||||||||| ||| ||||||| ||| |||||| |||||  |||||||| ||||||||||||| |    
T  54438602 tttaatacacatacaaataaaggataatttcgtaatattaacacacaaaacagacactttaattatacggacaatttttcttaagaaatgtgaaaaagac 54438503  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  54438502 aatggatacctacattaa 54438485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5536589 - 5536485
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | |||||||||||  ||| ||||||||||| ||| ||||||||  |||||||| |||||||||||||||    
T  5536589 tttaatacacatacaaacaaatgaaaatttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaaggc 5536490  T
Q  101 aatgg 105  Q
     ||||    
T  5536489 tatgg 5536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 52552528 - 52552656
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    |||||| |||||||||| |||||||||| | |||||||||||||| |||||| |||  ||| ||||||||| |||||||||||| ||||||| |||| ||    
T  52552528 atacacgtacaaacaaaggataatttggtaatattaacacataaagcagacaaatttattacactgacaacttttcttaaaaaacgtgaaaagggcattg 52552627  T
Q  105 gatccctatattaaatgacagatggagta 133  Q
    | | |||| |||||  ||| |||||||||    
T  52552628 ggtgcctacattaagggacggatggagta 52552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14602668 - 14602764
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  14602668 tttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37625138 - 37625234
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| ||||||| |||||||| | | |||||||||| |||  | |||||||| ||||||||||||| |||||||| ||||||||||||    
T  37625138 tttaatacacatataaacaaatgataatttagtaatattaacacacaaaataaacacattaattatactgacaacttttcttaagaaatgtgaaaaa 37625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 50782869 - 50782773
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    |||||||||||||||||||| || ||||| | | |||||| ||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||||    
T  50782869 ttaatacacatacaaacaaaggacaatttcgtaatattaagacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaag 50782773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 46729397 - 46729295
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||| | || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||||||| |||||||||||||| |    
T  46729397 tttaatacacatacaaacataggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttctta-aaaatgtgaaaaagac 46729299  T
Q  101 aatg 104  Q
    ||||    
T  46729298 aatg 46729295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33246510 - 33246608
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaagg 99  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| |||  |||||  ||| ||| ||| ||||| |||||||||||||||| ||||||    
T  33246510 tttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaaaaaatgtggaaaagg 33246608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 52198744 - 52198842
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    |||||||||||||| |||||||||||||| | |||||| ||| | | |||||| |||| ||| ||||||||| |||||||| |||||||||||| ||||    
T  52198744 aatacacatacaaataaaagataatttggtaatattaatacacagaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 52198842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12624788 - 12624687
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  || ||||||| ||| ||| ||||| |||||||| |||||||||||| ||    
T  12624788 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaaagc 12624689  T
Q  101 aa 102  Q
    ||    
T  12624688 aa 12624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22750855 - 22750956
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||| ||| ||| |||| |||||| ||| || |||||| |||||||| |||||||||||| ||    
T  22750855 tttaatacacatacaaacaaatgacaatttggtaatattaatacacaaaacagatacattaattacacagacaacttttcttaagaaatgtgaaaaatgc 22750954  T
Q  101 aa 102  Q
    ||    
T  22750955 aa 22750956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32236923 - 32236806
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| |||||||  ||||||||  | |||||||||| ||| |||||| |||| ||| ||||||||||||||| ||||||| |||| || ||    
T  32236923 tttaatacacatataaacaaagaataatttgataatattaacacacaaaacagacatattaattacactgacaacatttctaaaaaaatatgaataaagc 32236824  T
Q  101 aatggatccctatattaa 118  Q
    ||||| |  |||||||||    
T  32236823 aatgggtggctatattaa 32236806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37175035 - 37175135
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||| |||  |||||||||| ||| ||  ||||| |||||||| |||||||||||| ||    
T  37175035 tttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattacac-aacaacttttcttaagaaatgtgaaaaaagc 37175133  T
Q  101 aa 102  Q
    ||    
T  37175134 aa 37175135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 34543793 - 34543701
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaa 94  Q
    |||||||||||||||||||| ||| |||||| | |||||||||| |||  |||||||||| ||| || |||||| |||||||| |||||||||    
T  34543793 ttaatacacatacaaacaaaggattatttggtaatattaacacacaaaatagacacattaattacacggacaacttttcttaagaaatgtgaa 34543701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29584986 - 29584885
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| | |  |||||||||| ||| ||| ||||  |||||||| |||||||||||| ||    
T  29584986 tttaatacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatgc 29584887  T
Q  101 aa 102  Q
    ||    
T  29584886 aa 29584885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5932978 - 5932883
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| ||||||| || ||||||  | |||||||||| ||| || |||||||| ||| ||||||||| ||||||| |||||||||||||    
T  5932978 tttaatacacataaaaacaaatgacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttctta-aaaatgtgaaaaa 5932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19654520 - 19654424
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| ||| |||||||||| | ||| ||||||||||  |||||||||| ||| ||| |||   |||||||| ||||||||||||    
T  19654520 tttaatacacatacaaataaatgataatttggtaatatcaacacataaaatagacacattaattacactaacagtttttcttaagaaatgtgaaaaa 19654424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41945786 - 41945881
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| ||||||||||| || ||||| | | ||||| |||||||| || |||||||| ||| ||||||||  |||||||||||||||||||||    
T  41945786 tttaatacatatacaaacaaaggacaatttcgtaatattatcacataaaaca-acacattaattacactgacaatttttcttaaaaaatgtgaaaaa 41945881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43509173 - 43509079
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||  | |||||||||| ||| || |||||||| ||| || |||||| |||||||| ||||||||||||    
T  43509173 tttaatacacatacaaacaaaagacaatttgataatattaacacacaaaaca-acacattaattacac-gacaacgtttcttaagaaatgtgaaaaa 43509079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51787863 - 51787767
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| |   |||| | | |||||||||| ||| ||||||||||| ||| || |||||| |||||||| ||||||||||||    
T  51787863 tttaatacacatacaaacaaatgtctatttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 51787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20291432 - 20291331
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | ||||||| || |||  |||||||||| ||| | |  |||| |||||||| |||||||||||| ||    
T  20291432 tttaatacacatacaaacaaatgataatttagtaatattaacccacaaaatagacacattaattacattaccaacttttcttaagaaatgtgaaaaaagc 20291333  T
Q  101 aa 102  Q
    ||    
T  20291332 aa 20291331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24072859 - 24072755
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||| ||| |||| || |||||   | |||||||||| ||| ||||||||||| ||| | ||||||| |||||||| |||||| |||||| |    
T  24072859 tttaatacacattcaagcaaatgacaatttcataatattaacacaaaaaacagacacattaattacattgacaacttttcttaagaaatgtaaaaaagac 24072760  T
Q  101 aatgg 105  Q
    |||||    
T  24072759 aatgg 24072755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31486580 - 31486484
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||| |||| ||||||| |||||||| | | |||||||||| |||  |||||||||| ||  ||| ||||| |||||||| ||||||||||||    
T  31486580 tttaatacgcatataaacaaaggataatttagtaatattaacacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 31486484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39197047 - 39197143
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatc-agacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||||||||||||||||||||||| ||||||  | |||||||||| ||| | |||||||||| | ||| ||||||  |||||||| |||||| ||||    
T  39197047 tttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacaagacacattaatcatagtgacaatttttcttaagaaatgtaaaaa 39197143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 54359741 - 54359693
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaa 84  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  54359741 tattaacacataaaacagacacattaattatactgacaacttttcttaa 54359693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 38136442 - 38136351
Alignment:
Q  6 tacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||| || ||||||  | |||||||||| |||  |||||||||| ||| ||| ||||  |||||||| ||||||||||||    
T  38136442 tacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 38136351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 13096562 - 13096650
Alignment:
Q  8 cacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||| ||||||| || ||||||| | |||||||||| ||  ||||||||||| ||| ||| ||||| |||||| ||||||||||||||    
T  13096562 cacatagaaacaaatgacaatttggtaatattaacacacaacacagacacattaattacactaacaacttttctt-aaaaatgtgaaaaa 13096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22651556 - 22651455
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||| | |||  | |||||||| ||| | | | ||  |||||||| |||||||||||| ||    
T  22651556 tttaatacacatacaaacaaaagacaatttggtaatattaacatacaaaataaacacattaattacattaataaattttcttaagaaatgtgaaaaaagc 22651457  T
Q  101 aa 102  Q
    ||    
T  22651456 aa 22651455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 41920058 - 41920147
Alignment:
Q  8 cacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| ||||||| | |||||||||| |||  ||| | |||| ||  ||| ||||| |||||||| ||||||||||||    
T  41920058 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagaaatattaattgcactaacaacttttcttaagaaatgtgaaaaa 41920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7002275 - 7002227
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaa 49  Q
    ||||| ||||||||||||||| |||||||||| | ||||||||||||||    
T  7002275 tttaacacacatacaaacaaaggataatttggtaatattaacacataaa 7002227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20185669 - 20185765
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| |||||||||||||  ||||||| | |||||||||| ||| |   ||||||| ||| ||| ||||  |||||||| ||||||||||||    
T  20185669 tttaatacaaatacaaacaaaaggcaatttggtaatattaacacacaaaacttgcacattaattacactaacaaattttcttaagaaatgtgaaaaa 20185765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 43800897 - 43800786
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatact----------gacaacatttcttaaaaaatgtga 93  Q
    |||||||||||||||||| || ||||||| | |||||||||| ||| ||||||| ||| ||| |||          || |||||||||||| ||||||||    
T  43800897 aatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaccttaattacacttaattacactgagaacatttcttaacaaatgtga 43800798  T
Q  94 aaaaggcaatgg 105  Q
    ||||||||||||    
T  43800797 aaaaggcaatgg 43800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 56373357 - 56373453
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||| ||||||||| || ||||||| | |||||||||| |||  | |||||||| ||  ||| ||||  |||||||| ||||||||||||    
T  56373357 tttaatacacagacaaacaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 56373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5416882 - 5416974
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaa 95  Q
    |||||||||||||||||||||| | ||||||| | |||||||| | |||  ||||||||||  || ||  ||||| |||||||| ||||||||||    
T  5416882 tttaatacacatacaaacaaaacacaatttggtaatattaacaaacaaaatagacacatta--tacacaaacaacttttcttaagaaatgtgaaa 5416974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 50438892 - 50438946
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||  |  || ||||||||||||||| ||||||||||||    
T  50438892 acataaatcagacacattaactgcacagacaacatttcttaagaaatgtgaaaaa 50438946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3684201 - 3684302
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||| ||||| ||||||| ||||||||   | |||||| ||| |||  |||||||||| ||| || |||||  |||||||| |||||||||||| ||    
T  3684201 tttaatatacatataaacaaatgataatttaataatattaatacacaaaatagacacattaattacaccgacaatctttcttaataaatgtgaaaaaagc 3684300  T
Q  101 aa 102  Q
    ||    
T  3684301 aa 3684302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5168071 - 5167971
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||| || ||| |||||| |||| ||| || || ||| ||| ||||||||| ||||||| ||    
T  5168071 tttaatacacatacaaacaaatgacaatttagtaatattaacgcacaaaacagacatattaattacaccgaaaac-tttattaaaaaatatgaaaaatgc 5167973  T
Q  101 aa 102  Q
    ||    
T  5167972 aa 5167971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 20116542 - 20116440
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || |||||   | |||||||||| ||| |||   ||||| ||| | ||||||| |||||||| |||| ||||||| ||    
T  20116542 tttaatacacatacaaacaaatgacaatttcctaatattaacacacaaaacag--gcattaattacattgacaacttttcttaataaatatgaaaaatgc 20116445  T
Q  101 aatgg 105  Q
    |||||    
T  20116444 aatgg 20116440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31840188 - 31840094
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| |||  | | |||||| ||| ||| ||||  |||||||| |||| |||||||    
T  31840188 tttaatacacatacaaacaaatgacaatttggtaatattaacacacaaa--aaatacattaattacactaacaatttttcttaagaaatttgaaaaa 31840094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26203222 - 26203126
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| ||||||||| |||||| ||||| | | ||||||||||||||  | | |||||| ||| | | ||||| |||||||| ||||||| ||||    
T  26203222 tttaatatacatacaaagaaaagacaattttgtaatattaacacataaaatatatacattaattacagtaacaacttttcttaataaatgtggaaaa 26203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 56217100 - 56217140
Alignment:
Q  65 atactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    ||||| ||||| ||||||||||||||||||||| |||||||    
T  56217100 atactaacaacttttcttaaaaaatgtgaaaaaagcaatgg 56217140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5085101 - 5085218
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  5085101 tttaatacacatacaaacaaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggc 5085200  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  5085201 aatgggtgcctacattaa 5085218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25269468 - 25269362
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||||| |    
T  25269468 tttaatacacatacaaacaaaggaaaatttcgtaatattaacacataaaacagacacattatttacactgacaacttttcttaaaaaatgtgaaaaagac 25269369  T
Q  101 aatggat 107  Q
    |||||||    
T  25269368 aatggat 25269362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30898575 - 30898676
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||| ||| ||||||||  |||||||| |||||||||||| ||    
T  30898575 tttaatacacatacaaacaaaggataatttggtaatattaacacataaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaaagc 30898674  T
Q  101 aa 102  Q
    ||    
T  30898675 aa 30898676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16582624 - 16582518
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| |||||| ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||| |    
T  16582624 tttaatacacatacaaataaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagac 16582525  T
Q  101 aatggat 107  Q
    |||||||    
T  16582524 aatggat 16582518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33231931 - 33231825
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| |||||||||||||||    
T  33231931 tttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggc 33231832  T
Q  101 aatggat 107  Q
    |||||||    
T  33231831 aatggat 33231825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 3143494 - 3143362
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| |||||||||| ||||| | | |||||||||| ||| ||||||||||| ||| | ||||||| |||||||| |||||||||||| ||    
T  3143494 tttaatacacataaaaacaaaagacaattttgtaatattaacacacaaagcagacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagc 3143395  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||||| | |||| |||||  |||||| ||||||    
T  3143394 aatgggtgcctacattaagggacagagggagta 3143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8877863 - 8877760
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| || |||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  8877863 tttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattatactgacaatttttcttaaaaaatatgaaaaaggc 8877764  T
Q  101 aatg 104  Q
    ||||    
T  8877763 aatg 8877760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28723665 - 28723756
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtg 92  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| ||||||||||||||||    
T  28723665 tttaatacacatacaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtg 28723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 34696902 - 34697012
Alignment:
Q  8 cacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatggat 107  Q
    |||||||||||||| || ||||| | | |||||||||| ||| |||||| |||| ||| ||||||||| |||||||||||||||||||||| || |||||    
T  34696902 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgacaacttttcttaaaaaatgtgaaaaagacagtggat 34697001  T
Q  108 ccctatattaa 118  Q
    ||||| |||||    
T  34697002 ccctacattaa 34697012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48721880 - 48721998
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtg-aaaaagg 99  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||| | |||||||| ||||||| |||||||    
T  48721880 tttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacagcttttcttaagaaatgtgaaaaaagg 48721979  T
Q  100 caatggatccctatattaa 118  Q
    |||||| | |||| |||||    
T  48721980 caatgggtgcctacattaa 48721998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20564866 - 20564765
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||| ||||||||||| ||||| | | ||||||||||||||  |||||||||||||| |||  |||| |||||||| |||||||||||| ||    
T  20564866 tttaatacacattcaaacaaaagacaattttgtaatattaacacataaagtagacacattagttacactatcaacttttcttaacaaatgtgaaaaatgc 20564767  T
Q  101 aa 102  Q
    ||    
T  20564766 aa 20564765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9675679 - 9675811
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| || ||||| | | |||||||||| |||||||||| |||| ||| ||||||||| |||||||| ||| || |||||| |    
T  9675679 tttaatacacatacaaataaaggacaatttcgtaatattaacacacaaatcagacaaattaattacactgacaacttttcttaagaaacgtaaaaaagtc 9675778  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||||| | |||| |||||  ||| |||||||||    
T  9675779 aatgggtgcctacattaagggacggatggagta 9675811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 29140666 - 29140798
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||| ||| ||| ||||||||||| ||| || | |||| |||||||| |||||||||||||||    
T  29140666 tttaatacacatacaaacaaaggacaattttgtaatattaatacacaaaacagacacattaattacaccggcaacttttcttaagaaatgtgaaaaaggc 29140765  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||| |||  ||| |||||| ||| || ||||||    
T  29140766 aatagatgactacattaaaggacggagggagta 29140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44395626 - 44395522
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||| ||||||||||||| |||||||| | | ||||||||||||||  | ||| |||| ||| |||||||||||||||||| ||||||||||| | |    
T  44395626 tttaatatacatacaaacaaaggataattttgtaatattaacacataaaataaacatattaattacactgacaacatttcttaagaaatgtgaaaaggac 44395527  T
Q  101 aatgg 105  Q
    |||||    
T  44395526 aatgg 44395522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 32047527 - 32047416
Alignment:
Q  7 acacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgga 106  Q
    ||||||||||||||| || ||||| | | |||||||||| ||| || |||||||| ||| ||||||||| |||||||| |||||||||||| |||||||     
T  32047527 acacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaatggg 32047428  T
Q  107 tccctatattaa 118  Q
    | |||| |||||    
T  32047427 tgcctacattaa 32047416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2342995 - 2342894
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||| |||||||||||| ||||||| | |||||||||| |||  ||||||||||  || ||| ||||  ||||||||||||||||||||| ||    
T  2342995 tttaatacacacacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaagtaaactaacaatttttcttaaaaaatgtgaaaaaagc 2342896  T
Q  101 aa 102  Q
    ||    
T  2342895 aa 2342894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8984673 - 8984774
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||| ||||  || |||||||||||||||||| ||    
T  8984673 tttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagacacattaattacactaacaattttccttaaaaaatgtgaaaaatgc 8984772  T
Q  101 aa 102  Q
    ||    
T  8984773 aa 8984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13723490 - 13723591
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||||| | |||||| ||| |||  |||||||||| ||  ||| ||||| |||||||| |||||||||||| ||    
T  13723490 tttaatacacatacaaacaaaggataatttggtaatattaatacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatgc 13723589  T
Q  101 aa 102  Q
    ||    
T  13723590 aa 13723591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15512793 - 15512894
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  15512793 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 15512892  T
Q  101 aa 102  Q
    ||    
T  15512893 aa 15512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24415091 - 24414990
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| |||  ||| |||||| ||| || ||||| ||| ||||| |||||| ||||||||    
T  24415091 tttaatacacatacaaacaaatgataatttggtaatattaacacacaaaagagatacattaattacaccgacaatattacttaataaatgtaaaaaaggc 24414992  T
Q  101 aa 102  Q
    ||    
T  24414991 aa 24414990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28948976 - 28949077
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  28948976 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 28949075  T
Q  101 aa 102  Q
    ||    
T  28949076 aa 28949077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38680566 - 38680470
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| |||  |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  38680566 tttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 38680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 44335376 - 44335284
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||| |||||||||| || ||||||| | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| ||||||||||||    
T  44335376 atacacgtacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttattaagaaatgtgaaaaa 44335284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36085061 - 36084958
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| ||| ||||||||   | |||||||||| ||| |||| |||||| ||| ||||| ||  |||||||||||||||||||||| |    
T  36085061 tttaatacacatacaaataaaggataatttcttaatattaacacacaaaacagatacattaattacactgataatttttcttaaaaaatgtgaaaaagac 36084962  T
Q  101 aatg 104  Q
    ||||    
T  36084961 aatg 36084958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 16395566 - 16395648
Alignment:
Q  7 acacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaat 89  Q
    |||||||||||||||||||||||||| | |||||||| | |||  |||||||||| ||| || || |||||||||||||||||    
T  16395566 acacatacaaacaaaagataatttggtaatattaacatacaaaatagacacattaattacaccgataacatttcttaaaaaat 16395648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5322035 - 5322152
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| |||||||||||  | ||||| | | ||| |||||| ||| ||||||||||| ||| | ||| ||| ||||||||||||| ||||||||||    
T  5322035 tttaatacatatacaaacaaataacaatttcgtaatataaacacacaaaacagacacattaattacattgataacttttcttaaaaaatatgaaaaaggc 5322134  T
Q  101 aatggatccctatattaa 118  Q
    ||| ||| |||| |||||    
T  5322135 aatagatgcctacattaa 5322152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15179501 - 15179400
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||| || ||||||  |||||||||| ||| ||||||||  |||||||| |||||||||||| ||    
T  15179501 tttaatacacatacaaacaaaggacaattttgtaatatttacgcataaaatagacacattaattacactgacaatttttcttaagaaatgtgaaaaaagc 15179402  T
Q  101 aa 102  Q
    ||    
T  15179401 aa 15179400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23982604 - 23982705
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| ||||||||||| |  ||||||  | |||||||||| ||| ||||||||||| ||| | ||||||| |||||||| |||||||||||| ||    
T  23982604 tttaatacatatacaaacaaatgtcaatttgataatattaacacacaaaacagacacattaattacattgacaacttttcttaagaaatgtgaaaaatgc 23982703  T
Q  101 aa 102  Q
    ||    
T  23982704 aa 23982705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25258421 - 25258325
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | ||| || |||||||  |||||||||| ||  ||| ||||| ||||||||||||| |||||||    
T  25258421 tttaatacacatacaaacaaaggacaatttggtaatatcaagacataaaatagacacattaattgcactaacaacttttcttaaaaaatatgaaaaa 25258325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 52141187 - 52141290
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagaca--cattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    |||||||||||||||||||||||||||||||  | |||||||||| |||  |||||  ||||| ||| ||| | ||  |||||||||||||||||||||     
T  52141187 tttaatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacgcattaattacactaataatttttcttaaaaaatgtgaaaaaa 52141286  T
Q  99 gcaa 102  Q
    ||||    
T  52141287 gcaa 52141290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 10160760 - 10160693
Alignment:
Q  51 cagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatggatccctatattaa 118  Q
    ||||||||||| ||| ||||| ||| |||||||| ||||||||||||||||| |||| ||||||||||    
T  10160760 cagacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaacggatgcctatattaa 10160693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 30336146 - 30336047
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    |||| |||| ||||||| || ||||||| | |||||||||| |||  |||||||||| ||| || |||||| |||||||| |||||||||||| ||||||    
T  30336146 atacgcatagaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaagcaatg 30336047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 31807988 - 31808079
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| ||||| || || ||||||||    
T  31807988 atacacatgcaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaacttttctcaagaagtgtgaaaa 31808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 27531155 - 27531089
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    |||||||||| ||| || |||||||| ||||||||||||| |||||||| |||||||||||| ||||    
T  27531155 tattaacacacaaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaa 27531089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 28334265 - 28334331
Alignment:
Q  39 taacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    ||||||| ||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||| ||||||    
T  28334265 taacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgg 28334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 44652873 - 44653002
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | ||| ||| | |||||| ||| ||| ||||||||||| ||| |||   |||||||||||| ||||||||||| |||    
T  44652873 tttaatacacatacaaacaaagaacaatgtggtaatattaaaacacaaaacagacacattaattacact---aacatttcttaagaaatgtgaaaatggc 44652969  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    |||| ||  ||| |||||| ||| || ||||||    
T  44652970 aatgaatggctacattaaaggacggagggagta 44653002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47643631 - 47643536
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    |||||||||||| |||||||| || ||||| | | |||||||||| ||  || |||||||| ||| ||||||||| |||||||| |||||||||||||    
T  47643631 tttaatacacatgcaaacaaaggacaatttagtaatattaacacaaaa--catacacattaattacactgacaacttttcttaagaaatgtgaaaaag 47643536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4813474 - 4813575
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||| |||||||||||||||  ||||||||| | |||||||||| |||  |||||||||| ||  | | ||||| |||||||| |||||||||||| ||    
T  4813474 tttaacacacatacaaacaaagaataatttggtaatattaacacacaaaatagacacattaattgcattaacaacttttcttaagaaatgtgaaaaaagc 4813573  T
Q  101 aa 102  Q
    ||    
T  4813574 aa 4813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31305409 - 31305308
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | ||||| || | |||  |||||||||| ||| ||  ||||| |||||||| |||||||||||| ||    
T  31305409 tttaatacacatacaaacaaaggacaatttggtaatattagcatacaaaatagacacattaattacaccaacaacttttcttaataaatgtgaaaaaagc 31305310  T
Q  101 aa 102  Q
    ||    
T  31305309 aa 31305308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35001282 - 35001399
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || |||||   |  ||||||||| ||| ||||||  ||  ||| ||||||||| |||||||| ||||||||||||| |    
T  35001282 tttaatacacatacaaacaaaggacaatttcataacattaacacacaaaacagacattttgattacactgacaacttttcttaataaatgtgaaaaagac 35001381  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  35001382 aatgggtgcctagattaa 35001399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32152249 - 32152153
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||  | ||||||| | |||||||||| |||  |||||||||| ||  ||  ||||| |||||||| ||||||||||||    
T  32152249 tttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34102427 - 34102331
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| |||||||||||||  ||||||||  | |||||||||| ||| ||||||||||| ||| | ||| ||  ||||||||||||| |||||||    
T  34102427 tttaataaacatacaaacaaagaataatttgataatattaacacacaaaacagacacattaattacaatgaaaatttttcttaaaaaatttgaaaaa 34102331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46495400 - 46495304
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| ||||||||| ||| || ||||||  | |||||||||| ||| ||||||||||| ||| ||||||||  ||| || ||||||||||||||    
T  46495400 tttaatatacatacaaataaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaatttttttttaaaaatgtgaaaaa 46495304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51997046 - 51996958
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaat 89  Q
    ||||||||||||||||||||| ||  |||||| | |||||||||| ||| || ||| |||| ||| ||||||||| |||||||| ||||    
T  51997046 tttaatacacatacaaacaaaggacgatttggtaatattaacacagaaaacatacaaattaattacactgacaacttttcttaagaaat 51996958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15911564 - 15911655
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtg 92  Q
    ||||||||||||||||||||| | | |||||| | |||||||||| |||  ||||||||||  || ||| ||||| |||||||| |||||||    
T  15911564 tttaatacacatacaaacaaatggttatttggtaatattaacacacaaaatagacacattaagtacactaacaacttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 50692494 - 50692399
Alignment:
Q  7 acacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    ||||||||||||||| || ||||||| | || ||||||| |||  |||||||||| ||  | ||||||| |||||||| ||||||||||| |||||    
T  50692494 acacatacaaacaaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttcttaagaaatgtgaaaagggcaa 50692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 44163321 - 44163227
Alignment:
Q  3 taatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||| || |||||   | |||||||||| ||| || |||||||| ||| ||||| ||| ||| |||| ||||||||||||    
T  44163321 taatacacatacaaacaaatgacaatttaataatattaacacacaaaacaaacacattaattacactgataactttttttaagaaatgtgaaaaa 44163227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4817918 - 4818012
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||  | |||||| ||| |||  | ||||| || ||| || |||||| |||||||| ||||||||||||    
T  4817918 tttaatacacatacaaacaaaagacaatttgataatattaatacacaaa--acacacaataattacaccgacaacttttcttaagaaatgtgaaaaa 4818012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4829718 - 4829812
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||  | |||||| ||| |||  | ||||| || ||| || |||||| |||||||| ||||||||||||    
T  4829718 tttaatacacatacaaacaaaagacaatttgataatattaatacacaaa--acacacaataattacaccgacaacttttcttaagaaatgtgaaaaa 4829812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 13352917 - 13352832
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaa 94  Q
    ||||||||| ||| || ||||||  | |||||||||||||| ||||||||||| ||  ||| || ||||||||||| |||||||||    
T  13352917 acatacaaataaatgacaatttgctaatattaacacataaaacagacacattaattgaactaactacatttcttaagaaatgtgaa 13352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35365996 - 35366097
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||||  | |||||||||| |||  ||| |||||| ||| ||| ||||| |||  ||| |||| ||||||| ||    
T  35365996 tttaatacacatacaaacaaaagacaatttgataatattaacacacaaaatagatacattacttacactaacaacttttagtaagaaatatgaaaaaagc 35366095  T
Q  101 aa 102  Q
    ||    
T  35366096 aa 35366097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41737216 - 41737115
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||| |||||||||||||||||| ||||||| | |||||||||| |||  |||||  ||| ||| ||| ||||| |||||||| || ||||| ||| ||    
T  41737216 tttaaaacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaagaagtgtgataaatgc 41737117  T
Q  101 aa 102  Q
    ||    
T  41737116 aa 41737115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10842418 - 10842324
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||| ||||||||||||||| |||||||||| | |||||||||| |||| ||||| |||| ||  | | ||||| |||||||| ||||||||||||    
T  10842418 tttaacacacatacaaacaaacgataatttggtaatattaacaca-aaat-agacatattaattgcattaacaacttttcttaagaaatgtgaaaaa 10842324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25063301 - 25063241
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| || |||| || | |||||||||| ||| |||||||||||    
T  25063301 tttaatacacatacaaacaaaggacaattaggtaatattaacacacaaaacagacacatta 25063241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47070973 - 47071033
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||| |||||||||||| || ||||||| | ||||||||||||||  ||||||||||    
T  47070973 tttaatacgcatacaaacaaatgacaatttggtaatattaacacataaaatagacacatta 47071033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47754654 - 47754714
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| |||  ||||||||||    
T  47754654 tttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaaatagacacatta 47754714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 29302527 - 29302578
Alignment:
Q  67 actgacaacatttcttaaaaaatgtgaaaaaggcaatggatccctatattaa 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||| |||| |||||    
T  29302527 actgacaacttttcttaagaaatgtgaaaaagggaatggatgcctacattaa 29302578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 12845040 - 12845102
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    |||||||||| ||||||||  |  || ||||||||||||||| |||||||||||| |||||||    
T  12845040 acataaatcaaacacattaactgcacagacaacatttcttaagaaatgtgaaaaatgcaatgg 12845102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46591193 - 46591103
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgt 91  Q
    ||||||||||||| ||||||| || |||| |  | |||||||||| ||| || |||||||| ||| ||| ||||| |||||||||| ||||    
T  46591193 tttaatacacatagaaacaaaggacaattcgataatattaacacacaaaacaaacacattaattacactcacaacttttcttaaaatatgt 46591103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34331966 - 34331871
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| |||||||||||||||  | | || | ||||| |||  ||||||||||||| |||| ||||  ||| || ||||||||||||||    
T  34331966 tttaatacacatataaacaaaagataattcagtactactcacacacaaaatagacacattagttgtactaacaa-ttttttttaaaaatgtgaaaaa 34331871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9718185 - 9718291
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  ||||||||| | |||||||||| ||| ||||||||||| ||| |||||||||||||||||| |||||||||||| ||    
T  9718185 tttaatacacatacaaacaaagaataatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaatgc 9718284  T
Q  101 aatggat 107  Q
    |||||||    
T  9718285 aatggat 9718291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 8065086 - 8065189
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggca 101  Q
    |||||||||||||||||||| |||||||||| | |||||||||| ||| ||||||||||| ||| |||||||||||||||||  ||||||||||| ||||    
T  8065086 ttaatacacatacaaacaaaggataatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaggaaatgtgaaaagggca 8065185  T
Q  102 atgg 105  Q
    ||||    
T  8065186 atgg 8065189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31644455 - 31644584
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||| ||| ||||||| |||||||||||||| |    
T  31644455 tttaatacacatacaaacaaatgacaattttgtaatattaacacaaaaaacagacacattaattaaactgataacttttcttataaaatgtgaaaaagac 31644554  T
Q  101 aatggatccctatattaaatgacagatgga 130  Q
    ||||||| |||| |||||| ||| ||||||    
T  31644555 aatggatgcctacattaaaggacggatgga 31644584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 44274685 - 44274776
Alignment:
Q  6 tacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||| || ||||||||| |||||||||||||| ||||||||||| ||| | ||||||| |||||||||||||||||||||    
T  44274685 tacacatacaaacaaatgacaatttggcaatattaacacataaaacagacacattaattacattgacaacttttcttaaaaaatgtgaaaaa 44274776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 17250977 - 17251091
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaat 103  Q
    |||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||||||| ||||| |||||||||||||||||||||| ||||    
T  17250977 aatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattatactaacaacttttcttaaaaaatgtgaaaaagacaat 17251076  T
Q  104 ggatccctatattaa 118  Q
     ||| |||| |||||    
T  17251077 agatacctacattaa 17251091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 41665802 - 41665706
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||| ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  41665802 tttaatacacatacaaacaaaggacaatttgatactattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaa 41665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45214817 - 45214716
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |  ||||||  | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  45214817 tttaatacacatacaaacaaagggcaatttgaaaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaatgc 45214718  T
Q  101 aa 102  Q
    ||    
T  45214717 aa 45214716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44424687 - 44424551
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||| | ||| ||||||||||| ||| ||| ||||| |||||||| |||||||||||| ||    
T  44424687 tttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgc 44424588  T
Q  101 aatggatccctatattaaatgacagatggagtagact 137  Q
    ||||  | |||| |||||  ||| || ||||||||||    
T  44424587 aatgagtgcctacattaagggacggagggagtagact 44424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34330094 - 34329988
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| |||  |||||| ||||||| ||||| ||| |||| ||||||||||||| |    
T  34330094 tttaatacacatacaaacaaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaactttttttaagaaatgtgaaaaagac 34329995  T
Q  101 aatggat 107  Q
    |||||||    
T  34329994 aatggat 34329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17663716 - 17663615
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  || ||||||| ||| ||| ||||| |||||||| |||||||||||| ||    
T  17663716 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataggcacattaattacactaacaacttttcttaagaaatgtgaaaaaagc 17663617  T
Q  101 aa 102  Q
    ||    
T  17663616 aa 17663615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27297669 - 27297568
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | |||||||||| ||| ||||||||||| ||| ||| |||   |||||||| |||||||||||| ||    
T  27297669 tttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacactaacagtttttcttaagaaatgtgaaaaaagc 27297570  T
Q  101 aa 102  Q
    ||    
T  27297569 aa 27297568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28264964 - 28265065
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||| ||||||||||||| || ||||||| | ||||||| || ||| || |||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  28264964 tttaatatacatacaaacaaatgacaatttggtaatattaacgcacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagc 28265063  T
Q  101 aa 102  Q
    ||    
T  28265064 aa 28265065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1246426 - 1246542
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | |||||   | |||||||||| ||| || |||| ||| ||||||||||||| ||| |||| ||||||||||||| |    
T  1246426 tttaatacacatacaaacaaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgacaactttttttaagaaatgtgaaaaagac 1246525  T
Q  101 aatggatccctatatta 117  Q
    |||| || |||||||||    
T  1246526 aatgaatacctatatta 1246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3237815 - 3237716
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaaca--tttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| |||||||| | | |||||||||| ||| ||||||||||| ||| | | | ||||  ||||||||||||||||||||||    
T  3237815 tttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacattaataacacttttcttaaaaaatgtgaaaaag 3237716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 15851623 - 15851491
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||| || |||||   | |||||||||| ||| ||||||||||| ||| ||| ||||| |||||||| ||||||||||||| |    
T  15851623 tttaatacacatataaacaaaggacaatttcataatattaacacaaaaaacagacacattaattacactcacaacttttcttaagaaatgtgaaaaagac 15851524  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    ||| |||  ||| |||||  |||||| ||||||    
T  15851523 aatagatgtctacattaagggacagagggagta 15851491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24774957 - 24774861
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||| | |||||||||| |||  ||| |||||| ||| ||| | ||  |||||||||||||||||||||    
T  24774957 tttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagatacattaattacactaataaattttcttaaaaaatgtgaaaaa 24774861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35241721 - 35241824
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||| ||| |||||||||||| |||||||||  | |||||||| | ||| ||||||||||| ||| || ||||||||||||||  |||||| ||||||||    
T  35241721 tttattacgcatacaaacaaatgataatttgataatattaacaaacaaaacagacacattaattacacagacaacatttcttatgaaatgtaaaaaaggc 35241820  T
Q  101 aatg 104  Q
    ||||    
T  35241821 aatg 35241824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 28733911 - 28733820
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||| || ||||||| | ||||||||  |||| ||||||||||| ||| || |||||  ||||||||||||||||||||||    
T  28733911 atacacatacaaacaaatgacaatttggtaatattaaca--taaaacagacacattaattacaccgacaatttttcttaaaaaatgtgaaaaag 28733820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37355128 - 37355030
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaagg 99  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||| ||  ||||| |||||||| ||||||||||||||    
T  37355128 tttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacacaaacaacttttcttaagaaatgtgaaaaagg 37355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11459245 - 11459144
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| ||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| || |||||| |||| ||| |||||||||||| ||    
T  11459245 tttaatacatatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattatttacaccgacaacttttcataagaaatgtgaaaaaagc 11459146  T
Q  101 aa 102  Q
    ||    
T  11459145 aa 11459144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26512163 - 26512062
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  | |||||||| ||||||| ||||  ||| |||| |||||||||||| ||    
T  26512163 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataaacacattaattatactaacaattttttttaagaaatgtgaaaaaagc 26512064  T
Q  101 aa 102  Q
    ||    
T  26512063 aa 26512062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44421541 - 44421445
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||| | ||| |||| |||||| ||| ||||||||  |||||||| ||||||||||||    
T  44421541 tttaatacacatacaaacaaatgacaatttagtaatattaacaaacaaaacagatacattaattacactgacaatttttcttaagaaatgtgaaaaa 44421445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25731199 - 25731286
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaa 88  Q
    ||||||| |||||||||||||||||||||||  | |||||||||| ||| || ||| |||| |||||| || ||| ||||||||||||    
T  25731199 tttaatatacatacaaacaaaagataatttgataatattaacacacaaaccaaacatattaattataccgataacttttcttaaaaaa 25731286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35178806 - 35178923
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| ||||||| |||||| ||||| | | ||||| |||| ||| || ||||||||  || ||||||||| |||||||| ||||||||||||  |    
T  35178806 tttaatacaaatacaaataaaagacaatttcgtaatattatcacacaaaacatacacattaactacactgacaacttttcttaagaaatgtgaaaaaaac 35178905  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  35178906 aatgggtgcctacattaa 35178923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41865807 - 41865707
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||  |||||||||| | | |||||||| |||  |||||||||| ||| ||  ||||| |||||||| |||||||||||| ||    
T  41865807 tttaatacacatacaaacaag-gataatttggtaatgttaacacacaaaatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaaagc 41865709  T
Q  101 aa 102  Q
    ||    
T  41865708 aa 41865707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2131849 - 2131753
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| |||||||||||||||||||||| | |||||||||| |||  |||||  ||| ||  ||| ||||| |||||||| |||||| |||||    
T  2131849 tttaatacagatacaaacaaaagataatttggtaatattaacacacaaaatagacatgttaattgcactaacaacttttcttaagaaatgtaaaaaa 2131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13534471 - 13534411
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    |||||||||| ||| || |||||||| ||| |||||||||||||||||| |||||||||||    
T  13534471 tattaacacacaaaacaaacacattaattacactgacaacatttcttaagaaatgtgaaaa 13534411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 14420768 - 14420688
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttctt 82  Q
    ||||||||||| |||||||| || ||||||| | |||||||||| ||| ||||||||||| ||| ||| ||||| ||||||    
T  14420768 ttaatacacatgcaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactaacaacttttctt 14420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 20362071 - 20361979
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||  |||||||| ||||||||||||    
T  20362071 atacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaagaaatgtgaaaaa 20361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38982084 - 38982144
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||||||||||||||||| ||||||||| | |||||||||| ||| |||| ||||||    
T  38982084 tttaatacacatacaaacaaaaaataatttggtaatattaacacacaaaacagatacatta 38982144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2048843 - 2048936
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||||  ||| |||||| ||| ||  ||||| |||||||| |||||||||||    
T  2048843 tttaatacacatacaaacaaa-gataatttggta-tgttaacacataaaatagagacattatttacaccaacaacttttcttaagaaatgtgaaaa 2048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11071760 - 11071677
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaa 84  Q
    |||||||||||||||| |||| || ||||| | | ||||||||||||||| |||||||||| ||  ||| ||||| ||||||||    
T  11071760 tttaatacacatacaagcaaaggacaatttagtaatattaacacataaattagacacattaattgcactaacaacttttcttaa 11071677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 43650126 - 43650025
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | ||||| | | |||||||| | ||| ||||||||||| ||| ||||||||  ||||| || |||||| ||||| ||    
T  43650126 tttaatacacatacaaacaaagaacaatttagtaatattaacatacaaaacagacacattaattacactgacaatttttctaaagaaatgtaaaaaaagc 43650027  T
Q  101 aa 102  Q
    ||    
T  43650026 aa 43650025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 247752 - 247656
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| ||||||||||||| |  |||||   | |||||||||| |||  |||||||||| ||| ||| ||||| || ||||||||||||||||||    
T  247752 tttaatatacatacaaacaaagggcaattttataatattaacacacaaaatagacacattaattacactaacaactttccttaaaaaatgtgaaaaa 247656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 4398545 - 4398632
Alignment:
Q  9 acatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||| ||| ||||| |||||| ||||||||||||||    
T  4398545 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagacacattaattacactaacaacttttctt-aaaaatgtgaaaaa 4398632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38449727 - 38449787
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||||||||||||| |||||||||  | |||||| ||| ||| |||||||||||    
T  38449727 tttaatacacatacaaacaaatgataatttgataatattaatacacaaaacagacacatta 38449787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40346094 - 40346190
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| |||||| ||||| | | |||||||||| |||    |||||||| ||  ||  ||||| |||||||||||||||||||||    
T  40346094 tttaatacacatacaaataaaagacaatttagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttcttaaaaaatgtgaaaaa 40346190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4033673 - 4033572
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  | ||||| | | |||||||||| ||| |||| |||||| ||| ||| | ||| |||||||| |||| | ||||| ||    
T  4033673 tttaatacacatacaaacaaagaacaatttagtaatattaacacagaaaacagaaacattaattacactaataacttttcttaagaaatataaaaaaagc 4033574  T
Q  101 aa 102  Q
    ||    
T  4033573 aa 4033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21012945 - 21012844
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||  |||||||||||| |||||||||  | |||||||||| |||  | |||||||| ||  ||| ||||| |||||||| |||| ||||||| ||    
T  21012945 tttaatatgcatacaaacaaaggataatttgataatattaacacacaaaataaacacattaattgcactaacaacttttcttaagaaatttgaaaaatgc 21012846  T
Q  101 aa 102  Q
    ||    
T  21012845 aa 21012844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 27749569 - 27749508
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||| ||| ||| |||||| |||| ||| ||||||||| |||||||| ||||||||||||    
T  27749569 tattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaa 27749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2521313 - 2521373
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||||||||||||||||||| |||||   | ||||| ||||||||  ||||||||||    
T  2521313 tttaatacacatacaaacaaaagacaatttaataatattaccacataaaatagacacatta 2521373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7255693 - 7255633
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||||||| |||| |||| |||||||||| | |||||| ||| ||| |||||||||||    
T  7255693 tttaatacacaaacaatcaaaggataatttggtaatattaatacacaaaacagacacatta 7255633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14527715 - 14527655
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    ||||||| ||||||||||||| ||||||| || | |||||||||| |||  ||||||||||    
T  14527715 tttaatatacatacaaacaaatgataattcggtaatattaacacacaaaatagacacatta 14527655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4089513 - 4089630
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||| |||||||||||||||||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| ||||||||||||| |    
T  4089513 tttaatacatatacaaacaaaagataatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagtc 4089612  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  4089613 aatggatgcctacattaa 4089630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36116413 - 36116296
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| || ||||||||||||||| ||||||||||||| |    
T  36116413 tttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagacacattaattacaccgacaacatttcttaagaaatgtgaaaaagac 36116314  T
Q  101 aatggatccctatattaa 118  Q
    |||| || |||| |||||    
T  36116313 aatgaatgcctacattaa 36116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37673829 - 37673725
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| |||||   | |||||||||| ||| ||||||||||| ||| ||| |||||||||||||| ||||||||||||| |    
T  37673829 tttaatacacatacaaacaaaagacaatttcataatattaacacacaaaacagacacattaattacactcacaacatttcttaagaaatgtgaaaaagac 37673730  T
Q  101 aatgg 105  Q
    |||||    
T  37673729 aatgg 37673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1324800 - 1324697
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  |  ||||||||| ||| ||||||||||| ||| ||||| |||||||||||| |||||||||||||||    
T  1324800 tttaatacacatacaaacaaatgacaatttgataagattaacacacaaaacagacacattaattacactgataacatttcttaagaaatgtgaaaaaggc 1324701  T
Q  101 aatg 104  Q
    ||||    
T  1324700 aatg 1324697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48610149 - 48610251
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||| | | |||||| ||| ||| ||||||||||| ||| | ||||||| ||||||||||||||||||||| ||    
T  48610149 tttaatacacatacaaacaaaagacaatttcgtaatattaatacacaaaacagacacattaattacagtgacaacttttcttaaaaaatgtgaaaaatgc 48610248  T
Q  101 aat 103  Q
    |||    
T  48610249 aat 48610251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20123542 - 20123441
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||    
T  20123542 tttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagc 20123443  T
Q  101 aa 102  Q
    ||    
T  20123442 aa 20123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26632938 - 26632837
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||| ||||||||||||||||||||||| | | ||||||||||||||  ||||||||||  || ||| ||||  ||||||||||||||||||||| ||    
T  26632938 tttaatgcacatacaaacaaaagataatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaaaaaatgtgaaaaaagc 26632839  T
Q  101 aa 102  Q
    ||    
T  26632838 aa 26632837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10685177 - 10685081
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| ||||| ||| |||||||| |||| |||||||    
T  10685177 tttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgataacttttcttaagaaatatgaaaaa 10685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25750460 - 25750364
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| ||||||||||||    
T  25750460 tttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaa 25750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 37048127 - 37048031
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| |  ||||||||| ||| ||||||||||| ||| ||||| ||| |||||||| ||||||||||||    
T  37048127 tttaatacacatacaaacaaaggacaatttgggaacattaacacacaaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaa 37048031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 43465156 - 43465260
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttctt-aaaaaatgtgaaaaagg 99  Q
    |||||||||||||||||||||||| ||||||  | || ||||||| ||| ||||||||||| ||| |||||||||| ||||| ||||||| |||||||||    
T  43465156 tttaatacacatacaaacaaaagacaatttgaaaatactaacacacaaaacagacacattaattacactgacaacacttcttaaaaaaatatgaaaaagg 43465255  T
Q  100 caatg 104  Q
     ||||    
T  43465256 taatg 43465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 49100763 - 49100659
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||||||| ||||||||||| ||| ||||||||| | | |||| | ||| |||||||||    
T  49100763 tttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgacaacttattttaagagatgcgaaaaaggc 49100664  T
Q  101 aatgg 105  Q
    |||||    
T  49100663 aatgg 49100659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 18122059 - 18122161
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    |||||||| |||||||| || ||||| | | |||||||||||||| |||||||| || ||| ||| ||||| |||||||| ||||||||||||| |||||    
T  18122059 atacacattcaaacaaaggaaaatttagtaatattaacacataaaacagacacactaattacactcacaacttttcttaagaaatgtgaaaaagacaatg 18122158  T
Q  105 gat 107  Q
    |||    
T  18122159 gat 18122161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48767657 - 48767539
Alignment:
Q  1 tttaatacacatacaaa-caaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaagg 99  Q
    ||||||||||||||||| |||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| |||||||||||| |    
T  48767657 tttaatacacatacaaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacgttttttaagaaatgtgaaaaaag 48767558  T
Q  100 caatggatccctatattaa 118  Q
    |||||| | |||| |||||    
T  48767557 caatgggtgcctacattaa 48767539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 10595113 - 10595211
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggca 101  Q
    ||||||||||||||||||||||| | ||| | |  ||||||||| ||| |||||| |||| ||||||||||||| |||||||| |||||||||||| |||    
T  10595113 ttaatacacatacaaacaaaagacagtttcgta--attaacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaaaaacgca 10595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21388334 - 21388233
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| || |||||  |||||||| |||||||||||| ||    
T  21388334 tttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacaccgacaaattttcttaagaaatgtgaaaaaagc 21388235  T
Q  101 aa 102  Q
    ||    
T  21388234 aa 21388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 36726187 - 36726303
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||| ||| || |||||||| ||| ||| ||||||| |||||| | ||| |||||||||    
T  36726187 tttaatacacata-aaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactaacaacatctcttaagagatgcgaaaaaggc 36726285  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  36726286 aatggatgcctacattaa 36726303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40263803 - 40263706
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| || ||||| | | ||||||||   ||| ||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  40263803 tttaatacacatacaaacaaatgacaattttgtaatattaacaatcaaaacagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaag 40263706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2276590 - 2276686
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| ||| |||||| ||||  || ||||||||| ||| |||| ||||||||||||    
T  2276590 tttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaaattaactacactgacaacttttgttaagaaatgtgaaaaa 2276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21809660 - 21809756
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| |  |||||| |||||||| ||||||||||||    
T  21809660 tttaatacacatacaaacaaaggacaatttagtaatattaacacaaaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaa 21809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37491632 - 37491728
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| ||||||||||| |||||||||| | |||||||| |||||  |||||||||| ||  ||| ||||| |||||||| ||||||||||||    
T  37491632 tttaatacatatacaaacaaaggataatttggtaatattaacatataaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 37491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48193707 - 48193606
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||  ||| ||||||| |||||||||| | |||||||||| |||  |||||||||| ||| ||| ||||  ||||||||||||||||||||| ||    
T  48193707 tttaatactaatataaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaatttttcttaaaaaatgtgaaaaatgc 48193608  T
Q  101 aa 102  Q
    ||    
T  48193607 aa 48193606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6376146 - 6376242
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| |||| |||||| ||| ||| ||||  |||||||| ||||||||||||    
T  6376146 tttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagagacattaattacactaacaatttttcttaagaaatgtgaaaaa 6376242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21801069 - 21801165
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| ||| || ||||| | | |||||||||| ||| ||||||||||| ||| |  |||||| |||||||| ||||||||||||    
T  21801069 tttaatacacatacaaataaatgacaatttagtaatattaacacacaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaa 21801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46783854 - 46783950
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||| ||||||||| ||||||| | |||||||||||||   |||||||||| ||  ||| | ||| |||||||| ||||||||||||    
T  46783854 tttaatacacatacgaacaaaagacaatttggtaatattaacacataagatagacacattaatttcactaataacttttcttaagaaatgtgaaaaa 46783950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35128476 - 35128376
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || |||||   | |||||||||| ||| |||||| |||| ||| ||||||||| ||||||  |||||||||||||| |    
T  35128476 tttaatacacatacaaacaaaggacaatttcataatattaacacacaaaacagacatattaattacactgacaacttttctt--aaaatgtgaaaaagac 35128379  T
Q  101 aat 103  Q
    |||    
T  35128378 aat 35128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 29636057 - 29636154
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaa 102  Q
    |||||||||| ||||||| |  ||||||| | |||||||||| ||| ||||||||||| ||| | ||||||| |||||||||||||||| |||| ||||    
T  29636057 aatacacataaaaacaaaggc-aatttggtaatattaacacacaaaacagacacattaattacattgacaacttttcttaaaaaatgtgtaaaatgcaa 29636154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23876129 - 23876028
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||||| ||||| | | ||||||||||||||   |||| ||||  || ||| ||||| ||| |||| |||||||||||| ||    
T  23876129 tttaatacacatacaaacaaaagacaatttagtaatattaacacataaaatggacatattaactacactaacaactttttttaagaaatgtgaaaaaagc 23876030  T
Q  101 aa 102  Q
    ||    
T  23876029 aa 23876028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33181387 - 33181286
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||| | | ||| || ||||||||  || ||||||||||||| |||| |||| ||||||| ||    
T  33181387 tttaatacacatacaaacaaatgacaatttggtaatattaatatacaaaacaaacacattaactacactgacaacattttttaagaaatatgaaaaatgc 33181288  T
Q  101 aa 102  Q
    ||    
T  33181287 aa 33181286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27213579 - 27213483
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| ||||||||||||| || ||||| | | |||||||||| |||  ||||| |||||||  ||| ||||| |||||||| ||||||||||||    
T  27213579 tttaatagacatacaaacaaaggacaatttagtaatattaacacacaaaatagacatattagttgcactaacaacttttcttaagaaatgtgaaaaa 27213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5334408 - 5334495
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaa 88  Q
    ||||||||||||||||||||| |||| ||||| | |||||||| | ||| || |||||||| ||| ||| ||||  ||||||||||||    
T  5334408 tttaatacacatacaaacaaatgatagtttggtaatattaacatacaaaacaaacacattaattacactaacaatttttcttaaaaaa 5334495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 40211295 - 40211394
Alignment:
Q  6 tacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    |||||||||||| ||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||  ||||  ||||||||||||| |||||||| ||||||    
T  40211295 tacacatacaaataaatgacaatttcgtaatattaacacacaaaacagacacattaattacacaaacaatttttcttaaaaaatatgaaaaagacaatgg 40211394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27162917 - 27163012
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||||||||||| || ||||||||| |||||| ||| |||  | |||||||| ||  ||| ||||| || ||||| |||||||||||||    
T  27162917 tttaatacacatacaaacaaatgacaatttggcaatattaaaacacaaa--atacacattaattgcactaacaactttacttaagaaatgtgaaaaag 27163012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35960470 - 35960364
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||| |||||||||||||||||||||||| | | ||| || |||||||  |||||||||| || |||| ||||  ||| ||||  |||||||||||  |    
T  35960470 tttaacacacatacaaacaaaagataatttagtaatataaatacataaaatagacacattaattgtactaacaattttttttaaggaatgtgaaaaatac 35960371  T
Q  101 aatggat 107  Q
    |||||||    
T  35960370 aatggat 35960364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31373711 - 31373812
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||   || ||||  |||||||| |||||||||||| ||    
T  31373711 tttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgccctaacaatttttcttaagaaatgtgaaaaatgc 31373810  T
Q  101 aa 102  Q
    ||    
T  31373811 aa 31373812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 19236080 - 19236176
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||  | ||| ||| | |||||||| | ||| | ||||||||| ||| ||| ||||| |||||||  ||||||||||||    
T  19236080 tttaatacacatacaaacaaagaacaatatggtaatattaacatacaaaaccgacacattaattacactaacaacttttcttacgaaatgtgaaaaa 19236176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21392906 - 21392966
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||||||||||||||||| ||||||||| | |||||||||  |||  ||||||||||    
T  21392906 tttaatacacatacaaacaaaatataatttggtaatattaacactcaaaatagacacatta 21392966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28663847 - 28663752
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||| |||||||||||||  ||||||||  | |||||||||| |||  |||||||||| || || | ||||| |||||||| ||||||||||||    
T  28663847 tttaatatacatacaaacaaataataatttgataatattaacacacaaaatagacacattaattgtattaacaac-tttcttaagaaatgtgaaaaa 28663752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42993201 - 42993297
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||| |||||| | |||||||  | ||||||||||||||  |||||| ||| || || | ||||| |||||||| |||||| |||||    
T  42993201 tttaatacacatactaacaaaggttaatttgataatattaacacataaaatagacacgttaattgtattaacaacttttcttaagaaatgtaaaaaa 42993297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 40741032 - 40740945
Alignment:
Q  11 atacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||| ||| |||||||||| | |||||||||| |||  ||||| |||| ||| | | ||||| |||||||| |||||||||||||    
T  40741032 atacaaagaaatgataatttggtaatattaacacacaaaatagacatattaattacattaacaacttttcttaagaaatgtgaaaaag 40740945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 25098963 - 25099025
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    |||||||||||||||||||  |  || |||||||||| |||| |||||||||||| |||||||    
T  25098963 acataaatcagacacattaactgcacagacaacattttttaagaaatgtgaaaaatgcaatgg 25099025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21752620 - 21752579
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaac 42  Q
    ||||||||||||||||||||| |||||||||| | |||||||    
T  21752620 tttaatacacatacaaacaaatgataatttggtaatattaac 21752579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 34877758 - 34877626
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||| ||||||||| |||||||||| | |||||||||| ||| |||||| |||| ||| |||||||||||||||||| |||||||||||||||    
T  34877758 tttaatacacacacaaacaaatgataatttggtaatattaacacacaaaacagacaaattaattacactgacaacatttcttaagaaatgtgaaaaaggc 34877659  T
Q  101 aatggatccctatattaaatgacagatggagta 133  Q
    |||| ||  ||| |||||| ||| || ||||||    
T  34877658 aatgaatgtctacattaaaggacggagggagta 34877626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25017686 - 25017789
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| ||| ||||||||||| |||||||||||||||||||||| ||| ||||||||| |    
T  25017686 tttaatacacatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatactgacaacatttcttaagaaacgtgaaaaagac 25017785  T
Q  101 aatg 104  Q
    ||||    
T  25017786 aatg 25017789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10934098 - 10933996
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  ||||||||| | |||||||| | ||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  10934098 tttaatacacatacaaacaaagaataatttggtaatattaacatacaaaacagacacattaattacactgacaacatttctgaaaaaatgtgaaaaaggc 10933999  T
Q  101 aat 103  Q
    |||    
T  10933998 aat 10933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 27798247 - 27798142
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggca 101  Q
    |||||||||||||||||||| |||||||||  | |||||||||| ||| |||||| |||| ||| |||||||| ||||||||||||||||||||||  ||    
T  27798247 ttaatacacatacaaacaaatgataatttgataatattaacacacaaaacagacaaattaattacactgacaatatttcttaaaaaatgtgaaaaataca 27798148  T
Q  102 atggat 107  Q
    ||||||    
T  27798147 atggat 27798142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27587930 - 27587834
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||| ||||| || ||||| | | |||||||||| ||| ||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  27587930 tttaatacacatacatacaaaggacaatttagtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatgtgaaaaa 27587834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43060522 - 43060618
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||||||| ||| | |||||||||| |||  |||||||||| ||| ||| ||||| ||| |||||||||||||||||    
T  43060522 tttaatacacatacaaacaaaagataatatggtaatattaacacacaaaatagacacattaattacactaacaacttttattaaaaaatgtgaaaaa 43060618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9946370 - 9946487
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||| |||||||||| |||||||| | | |||||| || |||| ||||||||||| |||||  |||||| ||| |||||||||||||||||| |    
T  9946370 tttaatacacgtacaaacaaaggataatttcgtaatattaatacgtaaaacagacacattaattatatcgacaacttttattaaaaaatgtgaaaaagac 9946469  T
Q  101 aatggatccctatattaa 118  Q
    |||| || |||| |||||    
T  9946470 aatgaatgcctacattaa 9946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10523286 - 10523387
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| |||||||| | ||||||| | |||||||||| ||| ||||||||||| ||| ||||| ||| ||||||||||||| ||||||| ||    
T  10523286 tttaatacacataaaaacaaaaaacaatttggtaatattaacacacaaaacagacacattaattacactgataacttttcttaaaaaatatgaaaaaagc 10523385  T
Q  101 aa 102  Q
    ||    
T  10523386 aa 10523387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27642594 - 27642493
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  27642594 tttaatacacatacaaacaaaggataatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 27642495  T
Q  101 aa 102  Q
    ||    
T  27642494 aa 27642493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3247286 - 3247390
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||| | ||| |||||| |||| ||| |||| |||| |||||||| |||||||||||||||    
T  3247286 tttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaacttttcttaagaaatgtgaaaaaggc 3247385  T
Q  101 aatgg 105  Q
    |||||    
T  3247386 aatgg 3247390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35569017 - 35569113
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||  ||||||| | | |||||| ||||||| ||||||||||| ||| ||||| ||| |||||||| ||||||||||||    
T  35569017 tttaatacacatacaaacaaagaataatttagtaatattaatacataaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaa 35569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5845268 - 5845157
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||| ||| ||| || | |||||| ||| |||||||||| ||||||| |||| ||||||||||    
T  5845268 tttaatacacatacaaacaaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaacaattcttaagaaatatgaaaaaggc 5845169  T
Q  101 aatggatcccta 112  Q
    ||||||| ||||    
T  5845168 aatggatgccta 5845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15898475 - 15898570
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaa 96  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| ||| |||||||    
T  15898475 tttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaaagtgaaaa 15898570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36177384 - 36177267
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| |||  |||||||||| ||| ||||| ||| |||||||| |||||| |||||| |    
T  36177384 tttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattacactgataacttttcttaagaaatgtaaaaaagac 36177285  T
Q  101 aatggatccctatattaa 118  Q
    ||| ||| |||| |||||    
T  36177284 aatagatgcctacattaa 36177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39690498 - 39690599
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  39690498 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 39690597  T
Q  101 aa 102  Q
    ||    
T  39690598 aa 39690599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3559039 - 3559135
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| |||  |||||||||| ||||||  ||||  |||||||| ||||||||||||    
T  3559039 tttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaatttttcttaagaaatgtgaaaaa 3559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 21912211 - 21912111
Alignment:
Q  2 ttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggca 101  Q
    ||||||||||||||||||||||| |||||   | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| |||    
T  21912211 ttaatacacatacaaacaaaagacaatttaataatattaacacataaaatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagca 21912112  T
Q  102 a 102  Q
    |    
T  21912111 a 21912111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 38972139 - 38972234
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | ||||||||  ||||| |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  38972139 tttaatacacatacaaacaaaggacaatttggtaatattaacatttaaat-agacacattaattacactaacaacttttcttaagaaatgtgaaaaa 38972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12895221 - 12895319
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttc--ttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||| | |||||| ||| ||| ||||||||||| ||| || |||||| | ||  |||||||||||||||||    
T  12895221 tttaatacacatacaaacaaaagacaatttggtaatattaatacacaaaacagacacattaattacaccgacaacttctcttttaaaaaatgtgaaaaa 12895319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4738722 - 4738616
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||||||| |  ||||| | | |||||||||| ||| || | |||||| ||| |||||||| ||||||||| ||||||||||||| |    
T  4738722 tttaatacacataaaaacaaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgacaatatttcttaagaaatgtgaaaaagac 4738623  T
Q  101 aatggat 107  Q
    |||||||    
T  4738622 aatggat 4738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20946179 - 20946073
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||||  | |||||||||| |||  |||||| ||| ||  ||| ||||| |||||||| |||| ||||||| ||    
T  20946179 tttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaacgtttcttaagaaatatgaaaaatgc 20946080  T
Q  101 aatggat 107  Q
    |||||||    
T  20946079 aatggat 20946073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 15967124 - 15967257
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtg-aaaaagg 99  Q
    ||||||| ||||| ||| ||| | |||||||| | |||||| ||| ||| ||||||||||| ||| || |||||| |||||||| ||||||| |||||||    
T  15967124 tttaataaacatataaataaagggtaatttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaaaaaagg 15967223  T
Q  100 caatggatccctatattaaatgacagatggagta 133  Q
    ||||| ||  ||| |||||| ||| || ||||||    
T  15967224 caatgaatgtctacattaaaggacggaaggagta 15967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21574893 - 21575009
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||| |||||||||| || ||||||| | |||||||| | |||  ||||||||||  || ||| | |||||||||||| ||||||||||||| |    
T  21574893 tttaatacac-tacaaacaaaggacaatttggtaatattaacatacaaaatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaagac 21574991  T
Q  101 aatggatccctatattaa 118  Q
    ||||| | |||| |||||    
T  21574992 aatgggtgcctacattaa 21575009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29866281 - 29866185
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || || |||| | |||||||||| |||  ||||| |||| ||  ||| ||||| |||||||| ||||||||||||    
T  29866281 tttaatacacatacaaacaaaggacaacttggtaatattaacacacaaaaaagacatattaattgcactaacaacttttcttaagaaatgtgaaaaa 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43454074 - 43453986
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaat 89  Q
    |||||||||||||||||||||||||| ||||  | |||||||| | ||| | ||||||||| ||||||| ||||| ||| |||| ||||    
T  43454074 tttaatacacatacaaacaaaagatagtttgataatattaacatacaaaactgacacattaattatactaacaactttttttaagaaat 43453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4857506 - 4857612
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttat----actgacaacatttcttaaaaaatgtgaaaa 96  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  |||||||||| |||     ||| ||||| ||| |||| |||||||||||    
T  4857506 tttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaattaattacactaacaacttttattaagaaatgtgaaaa 4857605  T
Q  97 aggcaat 103  Q
    | |||||    
T  4857606 aagcaat 4857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30348089 - 30348190
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||| ||||||||| || ||||||| | |||||||||| |||  ||||||||||  || | | ||||| |||||| | |||||||||||| ||    
T  30348089 tttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaaatagacacattaagtaaattaacaacttttcttcagaaatgtgaaaaaagc 30348188  T
Q  101 aa 102  Q
    ||    
T  30348189 aa 30348190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 16969431 - 16969367
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||| | |||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||    
T  16969431 tattaacaaacaaattagacacattaattatactaacaatttttgttaaaaaatgtgaaaaaggc 16969367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19281503 - 19281563
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatta 61  Q
    |||||||||||||||||||||||||||||| | | |||||| ||| ||| |||| ||||||    
T  19281503 tttaatacacatacaaacaaaagataatttagtaatattaatacacaaaacagatacatta 19281563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25690699 - 25690794
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttg--gcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaa 94  Q
    ||||||||||||||||||||| || ||||||   |  |||||||||| ||| || |||||||| ||| || |||||| |||||||| |||||||||    
T  25690699 tttaatacacatacaaacaaaggacaatttgtaactatattaacacacaaaacatacacattaattacaccgacaacttttcttaagaaatgtgaa 25690794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36347613 - 36347709
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||||   ||||||  | |||||| ||| ||| |||| |||||| ||| ||||||||| ||| |||| |||| |||||||    
T  36347613 tttaatacacatacaaacaaaaatcaatttgataatattaatacacaaaacagatacattaattacactgacaacttttattaagaaatctgaaaaa 36347709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4745219 - 4745117
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaa-aaaatgtgaaaaagg 99  Q
    ||||||||||||||||||||| || ||||||| | ||||||| || |||  | |||||||| ||  ||| || || |||||||| ||||||||||||| |    
T  4745219 tttaatacacatacaaacaaatgacaatttggtaatattaacccacaaaataaacacattaattgcactaactacttttcttaaaaaaatgtgaaaaatg 4745120  T
Q  100 caa 102  Q
    |||    
T  4745119 caa 4745117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3631132 - 3631247
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |  ||||  | | |||||||||| ||| | ||||||||| ||| || |||||  ||| |||| ||||||||||||| |    
T  3631132 tttaatacacatacaaacaaaggtcaattgcgtaatattaacacacaaaaccgacacattaattacac-gacaattttt-ttaagaaatgtgaaaaagac 3631229  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  3631230 aatggatgcctacattaa 3631247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 7510663 - 7510602
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||| ||| || |||||||| ||| ||| | ||| |||||||||||||||||||||    
T  7510663 tattaacacacaaaacatacacattaattacactaataacttttcttaaaaaatgtgaaaaa 7510602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40979224 - 40979341
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||| ||| ||| || |||  ||| |||   ||||||| ||| |||| |||| |||||||| |    
T  40979224 tttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacatacatgttaattaccttgacaacttttattaagaaatatgaaaaagac 40979323  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  40979324 aatggatgcctacattaa 40979341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34513232 - 34513365
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||| | | |||||||||| ||| ||||||||||| |||| |||||||  ||||||||||||||| |||||  |    
T  34513232 tttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattatttatgctgacaaattttcttaaaaaatgtaaaaaaaac 34513331  T
Q  101 aatggatccctatattaaatgacagatggagtag 134  Q
    ||||||  |||| |||||  || |||||||||||    
T  34513332 aatggacgcctacattaagagatagatggagtag 34513365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9461385 - 9461282
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||||||||||||  ||||||| | | |||||||||||||| || |||||||| ||| || ||||||||||||||| ||||||||||||| |    
T  9461385 tttaatacacatacaaacaaagaataatttagtaatattaacacataaaacaaacacattaattacaccgacaacatttcttaataaatgtgaaaaagac 9461286  T
Q  101 aatg 104  Q
    ||||    
T  9461285 aatg 9461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16327215 - 16327119
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| ||||||||||| || ||||||| | |||||||||| ||| ||||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  16327215 tttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatattgacaacttttcttaagaaatgtgaaaaa 16327119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11302947 - 11302845
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||| |||||||| || ||||| | | |||||||||| ||| ||||||||||| ||||||| ||||| |||||||| ||||||||||||| |    
T  11302947 tttaatacacatgcaaacaaaggacaattttgtaatattaacacaaaaaacagacacattaattatactaacaacttttcttaagaaatgtgaaaaagac 11302848  T
Q  101 aat 103  Q
    |||    
T  11302847 aat 11302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1763905 - 1763804
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | |||||||||| ||| ||||||||||| ||| ||||||||| |||||||| |||| ||||||| ||    
T  1763905 tttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatatgaaaaaagc 1763806  T
Q  101 aa 102  Q
    ||    
T  1763805 aa 1763804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16350613 - 16350517
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||| ||||||||||| || ||||||| | |||||||||| ||| ||||| ||||| ||| ||||||||| ||| |||||||||||||||||    
T  16350613 tttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagactcattaattacactgacaacttttattaaaaaatgtgaaaaa 16350517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22410857 - 22410953
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||| |||||| ||||||| | |||||||| | ||| ||||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  22410857 tttaatacacatacaaataaaagacaatttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 22410953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19839023 - 19838922
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||  ||||||||||  || ||| ||||| |||||||| |||||||||||| ||    
T  19839023 tttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagc 19838924  T
Q  101 aa 102  Q
    ||    
T  19838923 aa 19838922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12514599 - 12514695
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||| ||||||| | |||||||||| |||  |||||||||| ||  ||| ||||  |||||||||| ||||||||||    
T  12514599 tttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaaaatatgtgaaaaa 12514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30465982 - 30466078
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||| || ||| |||| ||| || |||||| ||| |||| |||||| |||||    
T  30465982 tttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacaaacatattaattacaccgacaacttttgttaagaaatgtaaaaaa 30466078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5895823 - 5895706
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||| ||| ||| || ||||| | | |||||| ||| ||| ||||||||||| ||| | | ||||| |||||||| ||||||||||||| |    
T  5895823 tttaatacacataaaaataaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaacttttcttaagaaatgtgaaaaagac 5895724  T
Q  101 aatggatccctatattaa 118  Q
    ||||||| |||| |||||    
T  5895723 aatggatgcctacattaa 5895706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15981886 - 15981790
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||| |||||||||||| || || ||||||| | |||||||||| ||| ||||||||||| ||| ||  ||||| |||||||| ||||||||||||    
T  15981886 tttaagacacatacaaactaatgacaatttggtaatattaacacacaaaacagacacattaattacaccaacaacttttcttaagaaatgtgaaaaa 15981790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31945926 - 31946022
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||| ||||||| || ||||||| | |||||||||| |||  |||||||||| ||| ||| ||||  |||||||| ||||||||||||    
T  31945926 tttaatacacatataaacaaacgacaatttggtaatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 31946022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 197465 - 197558
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaa 94  Q
    ||||||||||||||||||||| || |||||   | |||| ||||| ||| || |||||||| ||||||||| ||| |||||||| |||||||||    
T  197465 tttaatacacatacaaacaaatgacaatttaataatattgacacacaaaacaaacacattaattatactgataacttttcttaagaaatgtgaa 197558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31536104 - 31536007
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaag 98  Q
    ||||||||||||| |||||||||||||||||  | |||||||| |||||  ||| | |||| ||| ||| ||||| |||||||| |||||| ||||||    
T  31536104 tttaatacacatataaacaaaagataatttgataatattaacaaataaaatagatatattaattacactaacaacttttcttaagaaatgtaaaaaag 31536007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 27441828 - 27441766
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    |||||||||||||||||||  |  || ||||||||||||||| |||||||||||| |||||||    
T  27441828 acataaatcagacacattaactgcacagacaacatttcttaataaatgtgaaaaatgcaatgg 27441766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 4250707 - 4250804
Alignment:
Q  36 tattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatggatccctatattaaatgacagatggagta 133  Q
    |||||||||| ||| ||||||||||| ||| ||||||||  |||||||| |||||| |||||| ||||  || |||| |||||  |||||| ||||||    
T  4250707 tattaacacacaaaacagacacattaattacactgacaatttttcttaagaaatgtaaaaaagacaataaatacctacattaagggacagagggagta 4250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 5084555 - 5084673
Alignment:
Q  5 atacacatacaaacaaaagataatttggcagtattaacacataaatcagacacatt----agttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||| || ||||||  | |||||||||| ||| || |||||||    | ||| ||| ||||| |||||||| ||||||||||| | |    
T  5084555 atacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacatttattaattacactaacaacttttcttaagaaatgtgaaaaggac 5084654  T
Q  101 aatggatccctatattaaa 119  Q
    ||| ||| |||||||||||    
T  5084655 aatagatgcctatattaaa 5084673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3729481 - 3729385
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||||||||||||||||||||  | ||||||| | |||||||||| |||  |||||||||| ||| ||  ||||  |||||||| |||||| |||||    
T  3729481 tttaatacacatacaaacaaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaaatgtaaaaaa 3729385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6791468 - 6791369
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| || |||||   | |||||||||| |||  | |||||||| ||| | ||||||| ||| |||| |||||||||||| ||    
T  6791468 tttaatacacatacaaacaaatgacaatttaataatattaacacacaaa--acacacattaattacattgacaactttttttaagaaatgtgaaaaaagc 6791371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 3307965 - 3308026
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatg 104  Q
    |||||||||||||||||||  |  || ||||| ||||||||| |||||||||||| ||||||    
T  3307965 acataaatcagacacattaactgcacagacaatatttcttaagaaatgtgaaaaatgcaatg 3308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 9428256 - 9428163
Alignment:
Q  4 aatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    |||| ||||||||||||| |||||||||  | |||||||||| |||  ||| |||||| ||||| |  |||| |||||||| ||| ||||||||    
T  9428256 aatatacatacaaacaaatgataatttgataatattaacacacaaaatagatacattaattatagtagcaacttttcttaagaaacgtgaaaaa 9428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20523064 - 20522976
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaat 89  Q
    |||||||||||||||||||| | ||||||||| | |||| ||||| |||  | || ||||| ||  ||| |||||||||||||| ||||    
T  20523064 tttaatacacatacaaacaagaaataatttggtaatattgacacacaaactaaactcattaattgcactaacaacatttcttaagaaat 20522976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1926 - 2027
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    ||||||||||||||||||||| |||||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| | |||||| |||||||||||| ||    
T  1926 tttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaacttatcttaagaaatgtgaaaaaagc 2025  T
Q  101 aa 102  Q
    ||    
T  2026 aa 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 214710 - 214614
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaa 97  Q
    ||||||||||||||||||||| || ||||||| | |||||||||| |||  |||||||||| ||| ||| ||||| |||||||| ||||||||||||    
T  214710 tttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 214614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 99830 - 99931
Alignment:
Q  1 tttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggc 100  Q
    |||||||||||| ||||||||||| ||||| | | |||||||||| |||  |||||||| ||||  ||| ||||| |||||||| |||| ||||||| ||    
T  99830 tttaatacacattcaaacaaaagacaatttcgtaatattaacacacaaaatagacacataagttgcactaacaacttttcttaacaaatatgaaaaatgc 99929  T
Q  101 aa 102  Q
    ||    
T  99930 aa 99931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 45533 - 45595
Alignment:
Q  43 acataaatcagacacattagttatactgacaacatttcttaaaaaatgtgaaaaaggcaatgg 105  Q
    |||||||||||||||||||  |  || |||||||||| |||| |||||||||||| |||||||    
T  45533 acataaatcagacacattaactgcacagacaacatttattaataaatgtgaaaaatgcaatgg 45595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University