View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16975_high_21 (Length: 363)
Name: NF16975_high_21
Description: NF16975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16975_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 7047202 - 7047482
Alignment:
| Q |
1 |
tttcttatataaaagaataatcatatatagagacattgaaataactgtataaaacattttacttagattatcagtacaccgtaaacttttatgtgcatgg |
100 |
Q |
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| T |
7047202 |
tttcttatataaaagaataatcatatatagagacattgaaataactgtataaaacattttacttaaattatcagtacactgtaaacttttatgtgcatgg |
7047301 |
T |
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| Q |
101 |
ttccttnnnnnnnngatattaatgtgaatgactttggaggaggttaatataaaagttgaatatctatgataatttgacggttataattgattcacattct |
200 |
Q |
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| T |
7047302 |
ttccctaaaaaaaagacattcatgtgcatgactttggaggaggttaatataaaagttgaatatctatgataatttgacggttataattgattcacattct |
7047401 |
T |
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| Q |
201 |
aaacattttagagttatttggtgtatatgacataaatcctcatttttatgtgtgattaaattatttttgtccatacatata |
281 |
Q |
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|||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7047402 |
aaacattttagagtcattcggtgtatatgacataaatcgtcatttttatgtgtgattaaattatttttgtccatatatata |
7047482 |
T |
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