View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16975_high_32 (Length: 320)

Name: NF16975_high_32
Description: NF16975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16975_high_32
NF16975_high_32
[»] chr6 (13 HSPs)
chr6 (1-310)||(30955034-30955341)
chr6 (1-310)||(30944774-30945081)
chr6 (1-285)||(31145525-31145807)
chr6 (1-285)||(31171838-31172120)
chr6 (1-280)||(30992261-30992538)
chr6 (1-277)||(31201398-31201672)
chr6 (1-280)||(30960779-30961056)
chr6 (1-300)||(31224284-31224581)
chr6 (1-285)||(31189583-31189865)
chr6 (1-300)||(31214015-31214312)
chr6 (1-185)||(30986097-30986279)
chr6 (1-272)||(31229565-31229833)
chr6 (1-104)||(31131490-31131593)
[»] chr7 (6 HSPs)
chr7 (193-271)||(31618457-31618535)
chr7 (157-277)||(31585591-31585711)
chr7 (195-268)||(31438982-31439055)
chr7 (195-271)||(31541209-31541285)
chr7 (199-274)||(31608444-31608519)
chr7 (193-271)||(31572804-31572881)
[»] chr1 (5 HSPs)
chr1 (199-280)||(9233930-9234011)
chr1 (195-277)||(49725148-49725230)
chr1 (195-277)||(49728570-49728652)
chr1 (199-280)||(9384383-9384464)
chr1 (199-271)||(11011057-11011129)
[»] chr8 (1 HSPs)
chr8 (146-274)||(44035593-44035721)
[»] chr4 (1 HSPs)
chr4 (195-274)||(15063329-15063408)


Alignment Details
Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 30955034 - 30955341
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30955034 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaataagggacctgaaa 30955133  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    ||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30955134 ccattgcatctttgagttgggataatttctatcaaattgcca--aagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 30955231  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30955232 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagca 30955331  T
Q  301 ctatattcat 310  Q
    ||||||||||    
T  30955332 ctatattcat 30955341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 30944774 - 30945081
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30944774 cttcttggattttgttttgaaggttgtaataaagctctcgtatatgaatttatgtctaatggttcccttgacaaatttatttacaataagggacctgaaa 30944873  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    ||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  30944874 ccattgcatctttaagttgggataatttgtatcaaattgcca--aagggatagctcgaagtttggagtatttgcatagggggtgtaatatccggatttta 30944971  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagca 300  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30944972 cattttgacataaaaccgcataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcaagaaagagagca 30945071  T
Q  301 ctatattcat 310  Q
    |||| |||||    
T  30945072 ctattttcat 30945081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 31145807 - 31145525
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||    || ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  31145807 cttcttggattttgttttgaaggcacaaaaaaagcactcatatatgaatttatgtccaatggttcacttgacaaatttatttacaataagggacctgaaa 31145708  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    | ||||||||||||||| |||| ||||||||||||||||| |  ||||||||||||| ||  | ||||| |||||||| |||||||  || || ||||||    
T  31145707 caattgcatctttgagttgggagaatttgtatcaaattgcaa--aagggatagctcgtgggctagagtacttgcatagaggatgtaccactcgaatttta 31145610  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtc 285  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  31145609 cattttgacataaaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaactctgtc 31145525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 31172120 - 31171838
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||    || ||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  31172120 cttcttggattttgttttgaaggcacaaaaaaagcactcatatacgaatttatgtcaaatggttctcttgacaaatttatttacaataagggacctgaaa 31172021  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    | ||||||||||||||| |||| ||||||||||||||||| |  ||||||||||||| ||  | ||||| |||||||| |||||||  || || ||||||    
T  31172020 caattgcatctttgagttgggagaatttgtatcaaattgcaa--aagggatagctcgtgggctagagtacttgcatagaggatgtaccactcgaatttta 31171923  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtc 285  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  31171922 cattttgacataaaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaactctgtc 31171838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 30992261 - 30992538
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  30992261 cttcttggattttgttttgaaggttgtaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatatacaataaggaacctgaaa 30992360  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    | ||||||||||| ||| |||||||| || ||||||||||   ||||||||||| || ||  | || ||||||||||| ||||||   || || ||||||    
T  30992361 cgattgcatctttaagttgggataatatgcatcaaattgc--gaaagggatagcccgtgggctagaatatttgcatagaggatgtgccactcgaatttta 30992458  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagct 280  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  30992459 cattttgacataaaaccacataacattcttttagatgagaatttttgtccaaagatctcagattttggactggcaaagct 30992538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 31201672 - 31201398
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||    || ||||| |||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||    
T  31201672 cttcttggattttgttttgaaggcacaaaaaaagcactcatatatgaatttatgtccaatggttctcttgacaaacttatttacaataagggaccagaaa 31201573  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    ||||||||||||||||| ||||||||||||||||||||||   ||||| |||||||| ||  | ||||| |||||||| |||||||  || || ||||||    
T  31201572 ccattgcatctttgagttgggataatttgtatcaaattgc--aaaaggaatagctcgtggactagagtacttgcatagaggatgtaccactcgaatttta 31201475  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaa 277  Q
    ||||| || |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  31201474 catttcgacataaaaccacataatattcttttagatgagaatttttgtccaaagatttcagattttggacttgcaaa 31201398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 30960779 - 30961056
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||  | || ||||||||  |||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||    
T  30960779 cttcttggattttgttttgaaggccgtaaaaaagctcttgtatatgaatttatgtccaatggttctcttgacaaatatatttacaataagggacctgaaa 30960878  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    |||||| |||||| ||| ||||| || || ||||||||||   ||||||||||| || ||  | || ||||||||||| ||||||  ||| || ||||||    
T  30960879 ccattgtatctttaagttgggatgatatgcatcaaattgc--gaaagggatagcccgtgggctagaatatttgcatagaggatgtgctactcgaatttta 30960976  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagct 280  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  30960977 cattttgacataaaaccacataacattcttttagatgagaatttttgtccaaagatctcagattttggactggcaaagct 30961056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 31224284 - 31224581
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||   ||| ||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||| ||| || |||||    
T  31224284 cttcttggattttgttttgaaggcaacaaaaaagctctcgtatatgaatttatgtcaaatggttctcttgacaaatttatctacaataaggaacttgaaa 31224383  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    | ||||||||||||||| ||||||| |||||| |||||||   |||||||||||||| ||  | ||||| |||||| | |||||||  ||  | ||||||    
T  31224384 caattgcatctttgagttgggataaattgtataaaattgc--aaaagggatagctcgtggactagagtacttgcatggaggatgtaccactagaatttta 31224481  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagca 300  Q
    |||||||| ||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||  |||||| ||||    
T  31224482 cattttgacataaaaccacacaacatccttttagatgataatttatgtccgaagatttcagattttggacttgcaaaactatgtctcaggaaagaaagca 31224581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 31189865 - 31189583
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||    || ||||| || ||||||||||||||||| |||||||| |||||||||||||| |||||  ||||||| || |    
T  31189865 cttcttggattttgttttgaaggcaaaaaaaaagcacttatatatgaatttatgtcaaatggttctcttgacaaatttatctacaacaagggaccagaga 31189766  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
      ||| ||||||||||| |||||||||||||||||||||| |  |||||||||| || ||  | ||||| |||||||| |||||||  ||  | ||||||    
T  31189765 gaattacatctttgagttgggataatttgtatcaaattgcaa--aagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaatttta 31189668  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtc 285  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  31189667 catttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtc 31189583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 31214015 - 31214312
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||| ||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||||||||||| | |  || |||||    
T  31214015 cttcttggattttgttttgacggtcgcaaaaaagccctgatctatgaattcatgtctaatggttcgcttgacaaatttatttacaacgcgcaacatgaaa 31214114  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
    ||  |  |||| ||||| |||| | | | ||| ||||||| |  |||||||||||||||| ||||||||  ||||||| ||||| | ||| || ||||||    
T  31214115 cctatcaatctctgagttgggagattctttatgaaattgcta--aagggatagctcgagggttggagtacctgcatagaggatgcagtactcgaatttta 31214212  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagca 300  Q
    ||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||| |||||||||||||||||||  || |||||| ||||||| ||||    
T  31214213 cattttgatataaaaccacataatattttattagatgaaaatttttgtccaaagatatcagattttggacttgcaagactttgtctcaagaaagaaagca 31214312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 30986097 - 30986279
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  30986097 cttcttggattttgttttgaaggttgtaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatatacaataaggaacctgaaa 30986196  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgt 185  Q
    | ||||||||||| ||| |||||||| || ||||||||||   ||||||||||| || ||  | || ||||||||||| ||||||    
T  30986197 cgattgcatctttaagttgggataatatgcatcaaattgc--gaaagggatagcccgtgggctagaatatttgcatagaggatgt 30986279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 31229565 - 31229833
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    |||||||||||||||||||||||  | || ||||||||||| |||||||| ||||| |||||||||||||| ||||| || |||||  |||||||||| |    
T  31229565 cttcttggattttgttttgaaggacggaaaaaagctctcatttatgaattaatgtcgaatggttcccttgaaaaattcatctacaaaaagggacctgaga 31229664  T
Q  101 ccattgcatctttgagtggggataatttgtatcaaattgccacaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggatttta 200  Q
     |||| ||||| ||||| |||| | | | |||||||||||   |||||||||||||||||  | ||||| ||||||| ||||||||  ||  | || |||    
T  31229665 -cattccatctctgagttgggacattctttatcaaattgc--gaaagggatagctcgagggcttgagtacttgcataagggatgtagcacttgaatctta 31229761  T
Q  201 cattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggactt 272  Q
    |||||||| || |||||||||||||| || ||| |||| ||||| ||||||||||| |||||||||||||||    
T  31229762 cattttgacatcaaaccacataacatcctcttatatgagaatttttgtccaaagatatcagattttggactt 31229833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31131593 - 31131490
Alignment:
Q  1 cttcttggattttgttttgaaggttgcaataaagctctcatatatgaatttatgtctaatggttcccttgacaaatttatttacaatgagggacctgaaa 100  Q
    ||||||||||||||||  |||||   ||| ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||     
T  31131593 cttcttggattttgttacgaaggcaccaaaaaagctcttgtatatgaatttatgtctaatggttctcttgacaaatttatctacaataagggacctgaat 31131494  T
Q  101 ccat 104  Q
    ||||    
T  31131493 ccat 31131490  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 31618535 - 31618457
Alignment:
Q  193 ggattttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggact 271  Q
    ||||| ||||| ||||||||||||| || ||||||||||| |||||| |||| |||||||| || ||||||||||||||    
T  31618535 ggattctacatcttgatataaaacctcaaaacattcttttggatgaagatttttgtccaaaaatctcagattttggact 31618457  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 31585711 - 31585591
Alignment:
Q  157 gaggtttggagtatttgcataggggatgtaatacccggattttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagat 256  Q
    ||||||| ||||||||||||   ||||||| | |  ||||| | ||| ||||||| ||||| || ||||||||||| |||||| |||| |||||||| ||    
T  31585711 gaggtttagagtatttgcatcaaggatgtagttcgaggattctgcatcttgatatcaaaccccaaaacattcttttggatgaagatttttgtccaaaaat 31585612  T
Q  257 ttcagattttggacttgcaaa 277  Q
     || ||||||||||| |||||    
T  31585611 atctgattttggactagcaaa 31585591  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 31438982 - 31439055
Alignment:
Q  195 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttgg 268  Q
    ||||| ||| ||||||| ||||| || |||||||||||||||||| |||| |||||||| || || ||||||||    
T  31438982 attttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttgg 31439055  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 31541285 - 31541209
Alignment:
Q  195 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggact 271  Q
    ||||| ||| ||||||| |||||||| ||||||||||| ||||||||||| || || || || || |||||||||||    
T  31541285 attttgcatcttgatatcaaaccacaaaacattcttttggatgaaaatttttgccccaaaatctctgattttggact 31541209  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 31608519 - 31608444
Alignment:
Q  199 tacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgc 274  Q
    ||||| ||||||| ||||| || ||||||||||| |||||| | || |||||||| || || ||||||||||||||    
T  31608519 tacatcttgatatcaaacctcaaaacattcttttggatgaagacttttgtccaaaaatatctgattttggacttgc 31608444  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 31572804 - 31572881
Alignment:
Q  193 ggattttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggact 271  Q
    ||||||| ||| ||||||||||||| || ||||||||||| |||||| |||| || ||||| || || |||||||||||    
T  31572804 ggattttgcatcttgatataaaacc-caaaacattcttttggatgaagatttttgcccaaaaatctctgattttggact 31572881  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 9233930 - 9234011
Alignment:
Q  199 tacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagct 280  Q
    ||||||||||||| || || ||||| |||||| |||| ||| ||||   ||||||| |||| ||||||||||||||||||||    
T  9233930 tacattttgatatcaagcctcataatattcttctagacgaagatttcgttccaaaggtttcggattttggacttgcaaagct 9234011  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 49725148 - 49725230
Alignment:
Q  195 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaa 277  Q
    ||||| |||||||| |||||||| |||||||||||||| ||||| |||||    || |  ||||| |||||||||||||||||    
T  49725148 attttgcattttgacataaaacctcataacattcttttggatgagaatttcaaccccagaatttcggattttggacttgcaaa 49725230  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 49728570 - 49728652
Alignment:
Q  195 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaa 277  Q
    ||||||||||||||||||||||| ||||| ||  |  |||| ||  |||| ||||| ||| |||| |||||||||||||||||    
T  49728570 attttacattttgatataaaacctcataatatattgctagacgatgatttttgtcctaaggtttcggattttggacttgcaaa 49728652  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 9384464 - 9384383
Alignment:
Q  199 tacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagct 280  Q
    ||||||||||||| || || ||||| |||||| |||| ||| | ||   ||||||| |||| ||||||||||||||||||||    
T  9384464 tacattttgatatcaagcctcataatattcttctagacgaagagtttgttccaaaggtttcggattttggacttgcaaagct 9384383  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 11011129 - 11011057
Alignment:
Q  199 tacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggact 271  Q
    |||| ||||||||||| || |||||||||||| | |||||||||||   ||||||  |||| |||||||||||    
T  11011129 tacactttgatataaagcctcataacattcttcttgatgaaaatttcaatccaaaagtttctgattttggact 11011057  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 44035593 - 44035721
Alignment:
Q  146 agggatagctcgaggtttggagtatttgcataggggatgtaatacccggattttacattttgatataaaaccacataacattcttttagatgaaaattta 245  Q
    |||||||||||||||  | ||||| |||||||  || || || ||  ||||||| ||||| || || |||||||||||||||||||| || |||| ||      
T  44035593 agggatagctcgaggactagagtacttgcataaagggtgcaacactaggatttttcatttcgacattaaaccacataacattcttttggacgaaacttac 44035692  T
Q  246 tgtccaaagatttcagattttggacttgc 274  Q
     |||| ||||| || ||||||||||||||    
T  44035693 cgtcccaagatatctgattttggacttgc 44035721  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 15063329 - 15063408
Alignment:
Q  195 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgc 274  Q
    ||||| ||| ||||||| ||||| || |||||||||||||||||| |||| || ||||| || || |||||||| |||||    
T  15063329 attttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgcccaaaaatatctgattttggtcttgc 15063408  T

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