View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16975_high_36 (Length: 293)
Name: NF16975_high_36
Description: NF16975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16975_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 28992918 - 28993186
Alignment:
| Q |
10 |
cagagataggattgatgttagctgcaacgttgattcatttttggtacgtaaagtcaaatgtacatcgatgcaatatgatgtttgaaatatgaatgctaag |
109 |
Q |
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| T |
28992918 |
cagagataggattgatgttagctgcaacgttgattcatttttggtacataaagtcaaatgtacatcgatgcaatatgatgtttgaaatatgaatgctaag |
28993017 |
T |
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| Q |
110 |
gaagcatatgtttatatt-tatggtatgttgcaggaccataagatacttcatattttgaataagaaaagtggtgagaaaaattgtttccttctcataatt |
208 |
Q |
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| T |
28993018 |
gaagcatatgtttatattgtatggtatgttgcaggaccataagatacttcatattttgaataagaaaagtggtgagaaaaattgtttccttctcataatt |
28993117 |
T |
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| Q |
209 |
aattatatatacaaaacttgttatgaggtacatcagaacaagcgacaaaggttctataatctatattct |
277 |
Q |
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| T |
28993118 |
aattatatatacaaaacttgttatgaggtacatcagaacaagcgacaaaggttctataatctatattct |
28993186 |
T |
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