View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16975_high_58 (Length: 234)
Name: NF16975_high_58
Description: NF16975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16975_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 40641622 - 40641820
Alignment:
| Q |
20 |
gaacggaatatttttaccttttttattgacatgaacggaatacctgaaccttgacgaagttattttgaaacttgttattgatttactctatttcccattg |
119 |
Q |
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| T |
40641622 |
gaacggaatatttttaccttttttattgacatgaacggaatacctgaaccttgacgaagttattttgaaacttgttattgatttactctatttcccattg |
40641721 |
T |
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| Q |
120 |
attgaggtattagaccaaacgggaaaattgaatgttatgaggaggaagaaatgaatattccgtacaaattagcaaccacgatttcatttacgaaatatg |
218 |
Q |
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| T |
40641722 |
attgaggtattagaccaaacgggaaaattgaatgttatgaggagaaagaaatgaatattccgtacaaattagcaaccacgatatcatttacgaaatatg |
40641820 |
T |
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