View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16975_low_72 (Length: 220)
Name: NF16975_low_72
Description: NF16975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16975_low_72 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 38983446 - 38983255
Alignment:
| Q |
11 |
agcacagaaggaaggatgcttatcataaaagacatcaatggacagagcgtgatcttccctttccacaacaacagtttcaaagagctgctcagataggtcc |
110 |
Q |
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| T |
38983446 |
agcacagaaggaaggatgcttctcataaaagacatcaatggacagagcatgatcttccctttccacaacaacagtttcaaagagctgctcagataggtcc |
38983347 |
T |
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| Q |
111 |
acatccacaagaactctggaaaaaattccaaaacatctgctctgagttacctcatcaattgcaagaggggtacctaagcctgaagcaatctc |
202 |
Q |
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| T |
38983346 |
acatccacaagaactctggaaaaaatcccaaaacgtctgctatgagttacctcatcaattgcaagaggggtacctaagcctgaagcaatctc |
38983255 |
T |
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