View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16976_high_16 (Length: 404)

Name: NF16976_high_16
Description: NF16976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16976_high_16
NF16976_high_16
[»] scaffold0140 (1 HSPs)
scaffold0140 (194-378)||(17728-17917)
[»] chr5 (30 HSPs)
chr5 (34-122)||(20476500-20476588)
chr5 (34-197)||(1138555-1138716)
chr5 (34-123)||(21259744-21259833)
chr5 (33-123)||(21262011-21262101)
chr5 (34-123)||(12744894-12744983)
chr5 (34-123)||(19976330-19976419)
chr5 (34-123)||(33629359-33629448)
chr5 (34-122)||(15855912-15856000)
chr5 (34-122)||(16473024-16473112)
chr5 (34-122)||(35420626-35420714)
chr5 (34-123)||(43539175-43539264)
chr5 (34-110)||(13754305-13754381)
chr5 (34-122)||(32623229-32623317)
chr5 (34-123)||(4266050-4266139)
chr5 (34-107)||(21591227-21591300)
chr5 (34-107)||(21595344-21595417)
chr5 (47-120)||(37552335-37552408)
chr5 (34-106)||(2529066-2529138)
chr5 (56-123)||(24397282-24397348)
chr5 (50-120)||(37655182-37655252)
chr5 (42-123)||(5144495-5144576)
chr5 (34-72)||(780911-780949)
chr5 (37-121)||(780811-780895)
chr5 (51-123)||(18236536-18236608)
chr5 (34-73)||(1164914-1164953)
chr5 (34-73)||(13754409-13754448)
chr5 (34-73)||(24397364-24397403)
chr5 (34-123)||(1456036-1456125)
chr5 (37-93)||(2268703-2268759)
chr5 (34-78)||(4913262-4913306)
[»] chr8 (25 HSPs)
chr8 (34-123)||(38629542-38629631)
chr8 (34-123)||(40891081-40891170)
chr8 (34-195)||(17426642-17426803)
chr8 (34-121)||(24741837-24741924)
chr8 (34-123)||(38520086-38520175)
chr8 (25-121)||(4261981-4262077)
chr8 (34-110)||(12234548-12234624)
chr8 (34-123)||(15882269-15882358)
chr8 (34-123)||(29780973-29781062)
chr8 (34-123)||(38405207-38405296)
chr8 (34-121)||(23940818-23940905)
chr8 (36-122)||(11828612-11828698)
chr8 (34-123)||(8210391-8210480)
chr8 (34-106)||(35467255-35467327)
chr8 (34-103)||(14834686-14834755)
chr8 (34-123)||(37114306-37114395)
chr8 (34-122)||(24211292-24211380)
chr8 (34-122)||(33100659-33100747)
chr8 (35-123)||(40393791-40393878)
chr8 (34-111)||(38515584-38515661)
chr8 (70-121)||(25264277-25264328)
chr8 (34-73)||(37114252-37114291)
chr8 (42-110)||(33390727-33390795)
chr8 (34-68)||(24211401-24211435)
chr8 (34-74)||(8210337-8210377)
[»] chr3 (51 HSPs)
chr3 (14-123)||(25446318-25446430)
chr3 (36-194)||(3970507-3970663)
chr3 (34-123)||(45487867-45487956)
chr3 (34-123)||(50099502-50099591)
chr3 (37-123)||(12789674-12789760)
chr3 (34-123)||(4072287-4072376)
chr3 (34-123)||(10254637-10254726)
chr3 (34-123)||(21969171-21969260)
chr3 (34-123)||(21991607-21991696)
chr3 (34-123)||(26906522-26906611)
chr3 (34-123)||(36278770-36278859)
chr3 (36-193)||(13078179-13078334)
chr3 (34-123)||(8831809-8831898)
chr3 (34-123)||(22101233-22101322)
chr3 (34-122)||(26976856-26976944)
chr3 (31-123)||(44920658-44920749)
chr3 (34-123)||(12838145-12838234)
chr3 (34-123)||(13724002-13724090)
chr3 (34-123)||(22176177-22176266)
chr3 (34-123)||(25488355-25488444)
chr3 (34-123)||(25561079-25561168)
chr3 (34-195)||(32237408-32237567)
chr3 (34-122)||(36657447-36657535)
chr3 (34-122)||(44611395-44611483)
chr3 (52-123)||(43150548-43150619)
chr3 (34-193)||(36822774-36822931)
chr3 (37-123)||(43639098-43639184)
chr3 (34-123)||(10117584-10117668)
chr3 (34-123)||(10441272-10441361)
chr3 (34-123)||(35368801-35368890)
chr3 (34-122)||(26977759-26977847)
chr3 (34-123)||(404113-404202)
chr3 (34-123)||(10017182-10017266)
chr3 (34-107)||(46222042-46222115)
chr3 (34-123)||(55340307-55340396)
chr3 (34-121)||(46664246-46664333)
chr3 (43-121)||(49984001-49984079)
chr3 (34-119)||(1476565-1476650)
chr3 (58-119)||(39677312-39677373)
chr3 (34-73)||(32237512-32237551)
chr3 (42-108)||(39850366-39850432)
chr3 (60-121)||(157008-157069)
chr3 (34-123)||(45712917-45713006)
chr3 (34-123)||(46679329-46679418)
chr3 (34-73)||(5529905-5529944)
chr3 (34-73)||(21969275-21969314)
chr3 (34-73)||(21991711-21991750)
chr3 (34-73)||(45487813-45487852)
chr3 (50-120)||(37536941-37537011)
chr3 (34-119)||(42105397-42105482)
chr3 (50-122)||(4567250-4567322)
[»] chr2 (32 HSPs)
chr2 (37-123)||(43476014-43476100)
chr2 (34-123)||(45408693-45408782)
chr2 (34-123)||(1923994-1924083)
chr2 (34-123)||(9281361-9281450)
chr2 (37-123)||(42713794-42713880)
chr2 (34-123)||(3116944-3117033)
chr2 (34-123)||(24101846-24101935)
chr2 (34-193)||(34455885-34456042)
chr2 (34-123)||(2818734-2818823)
chr2 (34-123)||(7737133-7737222)
chr2 (34-123)||(27920640-27920729)
chr2 (34-123)||(29229375-29229467)
chr2 (34-123)||(29342675-29342767)
chr2 (43-122)||(9850781-9850860)
chr2 (47-122)||(9933596-9933671)
chr2 (34-123)||(12850556-12850645)
chr2 (34-123)||(16705801-16705890)
chr2 (34-123)||(22269790-22269879)
chr2 (34-123)||(34490524-34490613)
chr2 (34-123)||(6605803-6605891)
chr2 (37-194)||(20892883-20893039)
chr2 (50-123)||(23835945-23836018)
chr2 (34-110)||(7116451-7116527)
chr2 (34-73)||(34455899-34455938)
chr2 (51-121)||(40362553-40362622)
chr2 (34-73)||(9933687-9933726)
chr2 (34-73)||(16705747-16705786)
chr2 (34-73)||(20892898-20892937)
chr2 (34-73)||(23835890-23835929)
chr2 (34-73)||(24101950-24101989)
chr2 (34-77)||(43858548-43858591)
chr2 (32-77)||(17500018-17500063)
[»] scaffold0188 (1 HSPs)
scaffold0188 (42-123)||(7154-7235)
[»] chr7 (34 HSPs)
chr7 (34-123)||(24836088-24836177)
chr7 (34-123)||(34052347-34052436)
chr7 (34-123)||(35339292-35339381)
chr7 (34-123)||(20184252-20184341)
chr7 (34-123)||(30594761-30594850)
chr7 (34-121)||(31231628-31231715)
chr7 (33-123)||(37093836-37093926)
chr7 (34-123)||(30259080-30259169)
chr7 (34-123)||(31521539-31521628)
chr7 (34-123)||(45997522-45997611)
chr7 (42-122)||(40358184-40358264)
chr7 (46-194)||(9285740-9285886)
chr7 (46-194)||(9289807-9289953)
chr7 (51-122)||(33749713-33749784)
chr7 (34-123)||(38883289-38883378)
chr7 (34-120)||(10936484-10936570)
chr7 (34-123)||(3953056-3953145)
chr7 (34-123)||(39617855-39617944)
chr7 (34-123)||(25742449-25742534)
chr7 (34-123)||(12142261-12142350)
chr7 (48-121)||(39143740-39143813)
chr7 (34-123)||(48103436-48103522)
chr7 (34-123)||(24123769-24123858)
chr7 (48-120)||(10398390-10398462)
chr7 (34-73)||(10936588-10936627)
chr7 (34-73)||(31231734-31231773)
chr7 (34-73)||(35665647-35665686)
chr7 (34-73)||(38528530-38528569)
chr7 (33-120)||(22723239-22723328)
chr7 (34-68)||(33721841-33721875)
chr7 (61-110)||(44148728-44148777)
chr7 (80-120)||(1402990-1403030)
chr7 (33-73)||(3953160-3953200)
chr7 (51-123)||(16876487-16876559)
[»] chr6 (27 HSPs)
chr6 (34-123)||(15546700-15546789)
chr6 (34-123)||(21379955-21380044)
chr6 (34-123)||(4890494-4890583)
chr6 (34-194)||(13439694-13439853)
chr6 (37-123)||(14393632-14393718)
chr6 (34-123)||(885453-885542)
chr6 (34-123)||(8091130-8091219)
chr6 (34-121)||(3369055-3369142)
chr6 (34-122)||(11687157-11687245)
chr6 (34-123)||(4238922-4239011)
chr6 (34-123)||(7808677-7808766)
chr6 (51-123)||(13172605-13172676)
chr6 (34-123)||(20501774-20501863)
chr6 (34-119)||(29609073-29609158)
chr6 (42-94)||(6433754-6433806)
chr6 (34-122)||(18998131-18998218)
chr6 (34-110)||(17279608-17279681)
chr6 (51-123)||(31764356-31764428)
chr6 (34-73)||(18998235-18998274)
chr6 (37-79)||(6433707-6433749)
chr6 (33-73)||(8091075-8091115)
chr6 (34-73)||(3368999-3369038)
chr6 (34-73)||(4890599-4890638)
chr6 (34-73)||(21380059-21380098)
chr6 (47-120)||(7187633-7187706)
chr6 (80-121)||(17367117-17367158)
chr6 (165-197)||(17279667-17279699)
[»] chr4 (34 HSPs)
chr4 (34-123)||(18417725-18417814)
chr4 (34-123)||(24969555-24969644)
chr4 (33-194)||(20435153-20435312)
chr4 (34-123)||(4688261-4688350)
chr4 (34-123)||(24915808-24915897)
chr4 (34-123)||(27434678-27434767)
chr4 (34-123)||(42274506-42274595)
chr4 (34-123)||(530683-530772)
chr4 (34-123)||(1298980-1299069)
chr4 (34-123)||(32318734-32318823)
chr4 (34-122)||(3422443-3422531)
chr4 (34-123)||(4552853-4552942)
chr4 (34-119)||(9355567-9355652)
chr4 (34-123)||(23928582-23928670)
chr4 (34-123)||(55049414-55049503)
chr4 (34-123)||(55107592-55107681)
chr4 (34-122)||(21048719-21048807)
chr4 (34-123)||(13204445-13204534)
chr4 (46-122)||(24294536-24294612)
chr4 (34-122)||(35360745-35360833)
chr4 (34-123)||(28809860-28809950)
chr4 (47-120)||(56552132-56552205)
chr4 (51-121)||(4895042-4895113)
chr4 (34-123)||(2272434-2272523)
chr4 (51-123)||(1051203-1051275)
chr4 (38-74)||(52587430-52587466)
chr4 (34-73)||(530787-530826)
chr4 (34-73)||(18417671-18417710)
chr4 (34-93)||(43486214-43486273)
chr4 (34-73)||(52824253-52824292)
chr4 (83-122)||(52824308-52824347)
chr4 (34-67)||(28573961-28573994)
chr4 (33-73)||(13204390-13204430)
chr4 (46-122)||(16995580-16995656)
[»] chr1 (47 HSPs)
chr1 (44-121)||(51276719-51276796)
chr1 (37-194)||(3607746-3607901)
chr1 (34-194)||(15324625-15324784)
chr1 (34-123)||(1387846-1387935)
chr1 (34-123)||(2854546-2854635)
chr1 (34-123)||(14387029-14387118)
chr1 (34-123)||(23698516-23698605)
chr1 (34-123)||(27240938-27241027)
chr1 (34-123)||(47940584-47940673)
chr1 (34-123)||(48954228-48954317)
chr1 (34-194)||(19954925-19955083)
chr1 (34-123)||(5189537-5189626)
chr1 (34-123)||(9978065-9978154)
chr1 (34-123)||(42561309-42561398)
chr1 (34-121)||(40647188-40647275)
chr1 (49-123)||(6079452-6079526)
chr1 (35-121)||(27670213-27670299)
chr1 (33-122)||(957658-957747)
chr1 (41-123)||(4299413-4299495)
chr1 (37-123)||(26208493-26208579)
chr1 (34-123)||(50627199-50627288)
chr1 (34-122)||(2125084-2125172)
chr1 (42-122)||(48645036-48645116)
chr1 (43-123)||(50856344-50856424)
chr1 (34-110)||(51789611-51789687)
chr1 (37-123)||(27926268-27926353)
chr1 (33-123)||(27928311-27928400)
chr1 (34-123)||(19796995-19797084)
chr1 (34-110)||(36880592-36880668)
chr1 (34-123)||(49284308-49284397)
chr1 (34-123)||(50162552-50162641)
chr1 (51-123)||(28431733-28431805)
chr1 (34-77)||(21930492-21930535)
chr1 (61-110)||(2302484-2302533)
chr1 (80-197)||(9895249-9895364)
chr1 (34-73)||(3607847-3607886)
chr1 (34-73)||(5189483-5189522)
chr1 (34-73)||(9978170-9978209)
chr1 (34-73)||(15324640-15324679)
chr1 (34-73)||(19797099-19797138)
chr1 (34-73)||(27926370-27926409)
chr1 (34-73)||(49285093-49285132)
chr1 (42-120)||(36007842-36007920)
chr1 (64-121)||(29598393-29598450)
chr1 (34-67)||(51276819-51276852)
chr1 (80-120)||(18651310-18651350)
chr1 (34-110)||(22338998-22339074)
[»] scaffold0122 (1 HSPs)
scaffold0122 (34-123)||(45902-45991)
[»] scaffold0107 (1 HSPs)
scaffold0107 (34-123)||(51131-51220)
[»] scaffold0653 (1 HSPs)
scaffold0653 (46-194)||(3419-3565)
[»] scaffold0086 (1 HSPs)
scaffold0086 (33-123)||(48194-48284)
[»] scaffold0163 (1 HSPs)
scaffold0163 (43-122)||(1962-2041)
[»] scaffold0595 (1 HSPs)
scaffold0595 (42-99)||(5797-5854)
[»] scaffold0137 (1 HSPs)
scaffold0137 (34-123)||(10183-10272)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-123)||(138291-138380)
[»] scaffold0118 (1 HSPs)
scaffold0118 (34-123)||(14510-14599)


Alignment Details
Target: scaffold0140 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 194 - 378
Target Start/End: Complemental strand, 17917 - 17728
Alignment:
Q  194 tatacattaaaccacggtatttcagttaggtccaatgtggaaagggaaaaaa--tcaacacttttttcttgctatttggtgttcattgataagaaatgga 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  17917 tatacattaaaccacggtatttcagttaggtccaatgtggaaagggaaaaaaaatcaacacttttttcttgccatttggtgttcattgatatgaaatgga 17818  T
Q  292 acttgaatcacaattg--ctttttcttgtca-ttttttgttctttgatatgaaatggaaaaagaaaagcttcttacattttaatatgtgg 378  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17817 acttgaatcacaattgtcttttttcttgtcatttttttgttctttgatatgaaatggaaaaagaaaagcttcttccattttaatatgtgg 17728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 20476588 - 20476500
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  20476588 tacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgttatatc 20476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 1138716 - 1138555
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| | ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||| ||||||||         |    
T  1138716 tacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaat--a 1138619  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcctata 197  Q
    ||||||||||  ||||||||||       | ||| ||| |||||||||||||||||||||||||    
T  1138618 tgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttctcctata 1138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 21259744 - 21259833
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  ||| ||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||| ||| ||||||||    
T  21259744 tacaattctttatgtgcttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgttatatcc 21259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 21262101 - 21262011
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| |||||  |||||| ||||||||||||| ||||||||| ||||||||||||||| || |||||||||||| ||| ||||||||    
T  21262101 atacaattccttagcagctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatcc 21262011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 12744983 - 12744894
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| |||||||||| || || | ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  12744983 tacaattccttaggtgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 19976419 - 19976330
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||| ||| || |||||||| |  ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  19976419 tacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatcc 19976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 33629359 - 33629448
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  33629359 tacaattccttatgtgcttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgttatatcc 33629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 15856000 - 15855912
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  15856000 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 15855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 16473112 - 16473024
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  16473112 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 16473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 35420626 - 35420714
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  35420626 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 35420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 43539264 - 43539175
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||||  |||||| || |||| ||||||||||||||| ||| ||||||||    
T  43539264 tacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaagtttgttatatcc 43539175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 13754305 - 13754381
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| |||| ||| |||||||||| ||||||| ||||||||  || ||||||||||||||||||||||||||||    
T  13754305 tacaattccttatgtgtttttcgtatgattcttaactaaattcaccataatttcctcaaattcataattttctcaaa 13754381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 32623229 - 32623317
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||  ||||||||   |||| ||||||||||||||| ||| |||||||    
T  32623229 tacaattccttaggtgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgttatatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 4266139 - 4266050
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||   ||||||| |||||| ||||||||||| ||| ||| ||| ||||    
T  4266139 tacaattccttaggtgtttttcgtatggttcttaactaaattcaccgtgatttcttcaaatccataattttcttaaagtttgttacatcc 4266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 21591227 - 21591300
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctc 107  Q
    ||||||| |||| ||||||||||||||||| | || ||||||||  ||||||||||||||| ||||||||||||    
T  21591227 tacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 21595344 - 21595417
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctc 107  Q
    ||||||| |||| ||||||||||||||||| | || ||||||||  ||||||||||||||| ||||||||||||    
T  21595344 tacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 37552335 - 37552408
Alignment:
Q  47 gtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    |||||||| ||| ||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||| |||||    
T  37552335 gtgctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 2529138 - 2529066
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttct 106  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||   ||||||||| |||| |||||||||||    
T  2529138 tacaatttcttaggtgcttttcgtgtggttcttaactaaattcaccgtgatttccttaaatccataattttct 2529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 24397282 - 24397348
Alignment:
Q  56 gtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||||||||| |||||||| | |||||||||||||| ||||||||||||||| ||| ||||||||    
T  24397282 gtatggttcttaactaaattcaca-tgatttcctcaaatccataattttctcaaagtttgttatatcc 24397348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 37655182 - 37655252
Alignment:
Q  50 cttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||| ||| ||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||| |||||    
T  37655182 ctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata 37655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 5144576 - 5144495
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| ||||| |||| || |||| ||||||||| |||||||| | ||||||||||||||||| ||  |||||||||||    
T  5144576 cttaggtgtttttcctatgatttttaactaaattcatcatgatttctttaaattcataattttctctaaggttattatatcc 5144495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 780949 - 780911
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaa 72  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  780949 tacaatttcttaggtgcttttcgtatggttcttaattaa 780911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 780811 - 780895
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||| ||||| | |||||||||||  |||| ||||||||||  |||||||||| |||| ||||||||||| ||| ||| ||||||    
T  780811 aattccttagattcttttcgtatgactcttgattaaattcaccatgatttccttaaatccataattttcttaaagtttgttatat 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 18236608 - 18236536
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||||||||||| ||||||| |  |||||| || |||| ||||||||| ||||| ||| ||||||||    
T  18236608 ttttcgtatggttcttaactaaattcgtcgtgattttcttaaatacataattttttcaaagtttgttatatcc 18236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 1164953 - 1164914
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  1164953 tacaattccttagctgcttttcgtatggttcttaattaaa 1164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 13754448 - 13754409
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  13754448 tacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 24397403 - 24397364
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  24397403 tacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 1456036 - 1456125
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||  |||||||  |||||||| ||| ||||||||   | |||| ||||||| ||||||||||||||| ||| ||||||||    
T  1456036 tacaattccttacctgctttttatatggttcataactaaattcactgtaattttctcaaatccataattttctcaaagtttgttatatcc 1456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 2268759 - 2268703
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaa 93  Q
    |||| ||||| ||||||| ||||||||||||| ||||||||   |||||||||||||    
T  2268759 aatttcttagatgctttttgtatggttcttaactaaattcactgtgatttcctcaaa 2268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 4913306 - 4913262
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcat 78  Q
    ||||||| |||||||| |||| ||||||||||||| |||||||||    
T  4913306 tacaatttcttaggtgttttttgtatggttcttaactaaattcat 4913262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 38629631 - 38629542
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  38629631 tacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatcc 38629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 40891170 - 40891081
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  40891170 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 40891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 17426642 - 17426803
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    |||||||  |||||||||||||||||||||||||| ||||||||  |||||||||||||||  |||||||||||||| ||| ||||||||         |    
T  17426642 tacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaata 17426741  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctccta 195  Q
    |  |||||||  ||||||||||       | |||||||||||||||||||||||||||||||    
T  17426742 tacatttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctccta 17426803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 24741837 - 24741924
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||| ||||||||| | ||||||||||    
T  24741837 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttattatat 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 38520175 - 38520086
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||||||||| || |||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  38520175 tacaattccttaagtgcttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 38520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 4261981 - 4262077
Alignment:
Q  25 gagaaaaaatacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||  |||||||  |||||||||||||||||||||||||| ||||||||  ||||||||||||| | ||||||||||||||| ||| ||||||    
T  4261981 gagaaaacgtacaattctttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 12234624 - 12234548
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| ||||| |||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||    
T  12234624 tacaatttcttagatgcttttcgtatggttattaactaaattcacgatgatttcctcaaattcataattttctcaaa 12234548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 15882358 - 15882269
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| |||||| |||||||| ||  ||||||||    
T  15882358 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataatattctcaaagttagttatatcc 15882269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 29780973 - 29781062
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||| |||| |||||| |  || |||||||||||| ||||||||||||||| ||| ||||||||    
T  29780973 tacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgttatatcc 29781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 38405296 - 38405207
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| ||| |||| ||||||||||||| ||||||||||||||||| || |||||| ||||||||||||| ||| ||||||||    
T  38405296 tacaatttcttatgtgttttttgtatggttcttaactaaattcataatgattttcttaaattcgtaattttctcaaagtttgttatatcc 38405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 23940818 - 23940905
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||| |||| |||||||||||||| ||||||| ||||||||  ||||||||||||||| | ||||||||||||| ||| ||||||    
T  23940818 tacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat 23940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 11828612 - 11828698
Alignment:
Q  36 caattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||| |||||||| |||||||||||||||||| ||||||||  || |||||||||||| ||| ||||||||||| ||| |||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 8210480 - 8210391
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| || |||| ||||| |||||||  |||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  8210480 tacaattccttagatgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 8210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 35467327 - 35467255
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttct 106  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||| |||||||| | |||| |||||||||||    
T  35467327 tacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttctttaaatccataattttct 35467255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 14834686 - 14834755
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattt 103  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||  ||||||| || |||||||||||||    
T  14834686 tacaattccttacgtgcttttcgtatggttcttaactaaattcaccatgattttcttaaattcataattt 14834755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 37114395 - 37114306
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||| || |||| ||||||||||||| ||||||||  ||||||| || |||| ||||||||||||||| ||||||||||||    
T  37114395 tacaattctttagatgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatatcc 37114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 24211292 - 24211380
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||  |||||||||||||||||||||||||||||||||||   | ||||||| || | ||||||||||||| | ||| |||||||    
T  24211292 tacaattctttaggtgcttttcgtatggttcttaattaaattcaccgtaatttccttaattccataattttctcatagtttgttatatc 24211380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 33100659 - 33100747
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||||||||||||||||||||||||| ||||   |   | |||||||||||| ||||||||||||||| ||| |||||||    
T  33100659 tacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgttatatc 33100747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 40393878 - 40393791
Alignment:
Q  35 acaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||| |||||||||||||  |||||||||||  ||||||||  || |||||||||||||  ||||||||||||||||| ||||||||    
T  40393878 acaatttcttaggtgcttttattatggttcttagctaaattcaccataatttcctcaaatt-ttaattttctcaaaatttgttatatcc 40393791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 38515661 - 38515584
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaa 111  Q
    ||||||| ||||| ||| |||||| ||||| |||||||||   | |||||||||||||||| ||||||||||||||||    
T  38515661 tacaattccttagatgcatttcgtgtggtttttaattaaaaatacaatgatttcctcaaatccataattttctcaaaa 38515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 25264277 - 25264328
Alignment:
Q  70 taaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||| ||||||    
T  25264277 taaattcacaatgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 37114252 - 37114291
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  37114252 tacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 33390795 - 33390727
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    |||||||||||||| ||||||| |||  ||||||  | | |||||||||||||||| ||||||||||||    
T  33390795 cttaggtgcttttcatatggtttttagctaaattactcacgatttcctcaaattcacaattttctcaaa 33390727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 24211435 - 24211401
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaa 68  Q
    ||||||| |||||||||||||||||||||||||||    
T  24211435 tacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 8210337 - 8210377
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaat 74  Q
    ||||||| ||||||||||||||||||| ||||||| |||||    
T  8210337 tacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 25446430 - 25446318
Alignment:
Q  14 atataaattaggagaaaa---aatacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    |||||||| |||||||||   | ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||    
T  25446430 atataaataaggagaaaacttagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaa 25446331  T
Q  111 atttattatatcc 123  Q
     ||| ||||||||    
T  25446330 gtttgttatatcc 25446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 3970507 - 3970663
Alignment:
Q  36 caattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatg 135  Q
    ||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||||         |||    
T  3970507 caattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaat--atg 3970604  T
Q  136 tatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||  ||||||||||       |||||||| |||||||||||||||||||||||    
T  3970605 tatttttagttaagaaccatacgaaaagtacctaagaaattgtacctaagttttctcct 3970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 45487956 - 45487867
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||    
T  45487956 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatcc 45487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 50099591 - 50099502
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||| ||| ||||||||    
T  50099591 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgttatatcc 50099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 12789760 - 12789674
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  12789760 aattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaattcataattttttcaaagtttgttatatcc 12789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 4072287 - 4072376
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  4072287 tacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatcc 4072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 10254726 - 10254637
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||| ||||| ||| ||||||||    
T  10254726 tacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttatatcc 10254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 21969171 - 21969260
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||||    
T  21969171 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatcc 21969260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 21991607 - 21991696
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||||    
T  21991607 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatcc 21991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 26906611 - 26906522
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| | ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  26906611 tacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 26906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 36278770 - 36278859
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| | ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  36278770 tacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 36278859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 13078179 - 13078334
Alignment:
Q  36 caattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatg 135  Q
    ||||| ||||||||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||||         |||    
T  13078179 caattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaat--atg 13078276  T
Q  136 tatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcc 193  Q
    ||||||||  |||||| |||       |||||||| ||||||||||||||||||||||    
T  13078277 tatttttagttaagaatcatacgaaaagtacctaagaaattgtacctaagttttctcc 13078334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 8831898 - 8831809
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||||||||||||||||||||||||| ||||||||  |||||||| |||||| ||||||||||||||| ||| ||||||||    
T  8831898 tacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatcc 8831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 22101322 - 22101233
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| | |||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  22101322 tacaattccttatgagcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatcc 22101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 26976856 - 26976944
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||||||||||||||| |||||| ||||    
T  26976856 tacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattgtatc 26976944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 44920658 - 44920749
Alignment:
Q  31 aaatacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||| ||||| |||||||| |||||||||||| |||||| | |||||||| |||||||| |||||||||||||| ||||||||||||    
T  44920658 aaatacaattccttag-tgcttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaagtttattatatcc 44920749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 12838234 - 12838145
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  ||||||| ||||||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  12838234 tacaattctttaggtgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12838145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 13724002 - 13724090
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| |||||||||||| | |||||||  |||||||| |||||||||||||||||||||| ||| ||||||||    
T  13724002 tacaatttcttaggtgctttttgtatggttcttact-aaattcaccatgatttcttcaaattcataattttctcaaagtttgttatatcc 13724090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 22176266 - 22176177
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| | ||||||    
T  22176266 tacaattccttatgtgctttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtaatatcc 22176177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 25488355 - 25488444
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||  |||||||| ||| || ||||||||||||||| ||| ||||||||    
T  25488355 tacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatcc 25488444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 25561168 - 25561079
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||  |||||||| ||| || ||||||||||||||| ||| ||||||||    
T  25561168 tacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatcc 25561079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 195
Target Start/End: Original strand, 32237408 - 32237567
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| |||||||| |||||||||||||||||| |||||| |  ||||||| |||| || ||||||||||||||| ||| ||||||||         |    
T  32237408 tacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatatccaaaaaat--a 32237505  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctccta 195  Q
    ||||||||||| ||||||||||       | ||||||  |||||||||||||||||||||||    
T  32237506 tgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccta 32237567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 36657447 - 36657535
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  36657447 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 36657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 44611395 - 44611483
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||||| ||||| |||| |||||||| ||||||||  |||||||| |||||||||||||||||||||| ||| |||||||    
T  44611395 tacaattccttaggtactttttgtatagttcttaactaaattcaccatgatttcttcaaattcataattttctcaaagtttgttatatc 44611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 43150619 - 43150548
Alignment:
Q  52 tttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  43150619 tttcgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 43150548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 36822774 - 36822931
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   |  |||||||||||| || ||||||||||||||| ||| ||||||||         |    
T  36822774 tacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttatatccaaaaaat--a 36822871  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcc 193  Q
    ||||||||||  ||||||||||       | |||||||||||||||||||||||||||||    
T  36822872 tgtatttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 43639098 - 43639184
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| ||||||||||||||||||| |||||||  |||||||  |||||||| |||||| ||||||||||||||| ||| ||||||||    
T  43639098 aattccttaggtgcttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatcc 43639184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 10117668 - 10117584
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||     |||| ||||||| ||||||||||||||| ||| ||||||||    
T  10117668 tacaattccttaggtgcttttcgtatggttcttaactaaattca-----attttctcaaatccataattttctcaaagtttgttatatcc 10117584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 10441272 - 10441361
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  10441272 tacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 10441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 35368890 - 35368801
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| ||| ||||||||||||| |||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  35368890 tacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 26977847 - 26977759
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| | |||||| |||||||||||| |||||| |  ||||||||||||||| ||||||||||||||| |||||| ||||    
T  26977847 tacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagtttattgtatc 26977759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 404202 - 404113
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||| |||||| |||||||||||||| ||||||||  ||||||||||||| |  |||||||||||||| ||| ||||||||    
T  404202 tacaattctttagatgctttccgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatatcc 404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 10017266 - 10017182
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||||||     ||||||| ||||||| ||||||| ||||||||| ||||| ||| ||||||||    
T  10017266 tacaattccttaggtgcttttcgtatggttctt-----aattcatcatgattttctcaaatccataattttttcaaagtttgttatatcc 10017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 46222042 - 46222115
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctc 107  Q
    ||||||| |||||||| ||||||||||||| |||| ||||||||  ||||||| || |||||||||||||||||    
T  46222042 tacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatgattttcttaaattcataattttctc 46222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 55340307 - 55340396
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| ||| |||||||||| ||||||| || |||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  55340307 tacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 55340396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 46664333 - 46664246
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||  |||||||||||||||||| || ||||| |||   || || |||||||||||||||||||||||||||| ||| ||||||    
T  46664333 tacaattctttaggtgcttttcgtatgatttttaataaaaaatatcataatttcctcaaattcataattttctcaaagtttgttatat 46664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 49984079 - 49984001
Alignment:
Q  43 ttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||| ||||||||| | ||||||| ||||||||  ||||||| || |||| ||||||||| ||||||||||||||||    
T  49984079 ttaggtacttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 1476565 - 1476650
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattat 119  Q
    ||||||| ||||||||||||| |||||||||| |  ||||||||  |||||||||| |||| ||||||| ||||||| ||| ||||    
T  1476565 tacaattccttaggtgcttttggtatggttctaacctaaattcaccatgatttccttaaatccataattctctcaaagtttgttat 1476650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 39677312 - 39677373
Alignment:
Q  58 atggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattat 119  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||| ||||| ||| ||||    
T  39677312 atggttcttaattaaattcactatgattttctcaaattcataattttttcaaagtttgttat 39677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 32237551 - 32237512
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  32237551 tacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 39850366 - 39850432
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctca 108  Q
    |||||||| |||||||||||||||||| ||||   |  ||||||||||||||| |||||||||||||    
T  39850366 cttaggtgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctca 39850432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 157008 - 157069
Alignment:
Q  60 ggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||||| |||||| || || |||||||||||| ||||||||||||||| ||| ||||||    
T  157008 ggttcttaactaaatttatcataatttcctcaaatccataattttctcaaagtttgttatat 157069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 45712917 - 45713006
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||  | |  ||||||| ||||||||  ||||||||||||||  ||||||||| ||||| ||| ||||||||    
T  45712917 tacaattccttaggtgctttttttttttttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgttatatcc 45713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 46679418 - 46679329
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||| | |||||||  || ||||||||| ||||||||  || |||||||||||| ||||||||||||||| ||| ||| ||||    
T  46679418 tacaattccttggatgctttttatacggttcttaactaaattcaccataatttcctcaaatccataattttctcaaagtttgttaaatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5529905 - 5529944
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  5529905 tacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 21969314 - 21969275
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  21969314 tacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 21991750 - 21991711
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  21991750 tacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 45487813 - 45487852
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  45487813 tacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 37537011 - 37536941
Alignment:
Q  50 cttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||| ||||||||||||| ||||||  | || |||||||| ||| ||||||||||||||| ||| |||||    
T  37537011 ctttttgtatggttcttaactaaattatttataatttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 42105397 - 42105482
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattat 119  Q
    ||||||| | ||||| |||||| |||||||||||| ||||||||   |||||| || |||| ||||||| ||||||| ||| ||||    
T  42105397 tacaatttcataggtacttttcttatggttcttaactaaattcaccgtgattttcttaaatccataattctctcaaagtttgttat 42105482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 4567322 - 4567250
Alignment:
Q  50 cttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||||||||||||||  |||||| || | | |||||||||||||||  |||||||||  ||| |||||||    
T  4567322 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 4567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 43476100 - 43476014
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| |||||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  43476100 aattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 45408782 - 45408693
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  45408782 tacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 45408693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 1923994 - 1924083
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  1923994 tacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatcc 1924083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 9281361 - 9281450
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  9281361 tacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 9281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 42713794 - 42713880
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| |||||||| |||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||||||||||||    
T  42713794 aattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattatatcc 42713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 3117033 - 3116944
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| | ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  3117033 tacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatcc 3116944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 24101846 - 24101935
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| |||||  |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  24101846 tacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgttatatcc 24101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 34456042 - 34455885
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| |||| ||| |||||||||||||| ||||||||||||| || ||||||||||||  |||||||||||||| ||| ||||||||         |    
T  34456042 tacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatatccaaaaaat--a 34455945  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcc 193  Q
    ||||||||||| ||||||||||       | ||||||  |||||||||||||||||||||    
T  34455944 tgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34455885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 2818823 - 2818734
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  ||||||| |||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| |||  |||||||    
T  2818823 tacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatatatcc 2818734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 7737222 - 7737133
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||| ||||||| |||||| |  ||||||||||||||  ||||||||||||||| ||| ||||||||    
T  7737222 tacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgttatatcc 7737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 27920729 - 27920640
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||| ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||| ||||| ||| ||||||||    
T  27920729 tacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgttatatcc 27920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 29229375 - 29229467
Alignment:
Q  34 tacaattacttaggtgctttt--cgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaa-tttattatatcc 123  Q
    |||||||||||| ||||||||  |||||| ||||||| || |||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  29229375 tacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatcc 29229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 29342675 - 29342767
Alignment:
Q  34 tacaattacttaggtgctttt--cgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaa-tttattatatcc 123  Q
    |||||||||||| ||||||||  |||||| ||||||| || |||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  29342675 tacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatcc 29342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 9850781 - 9850860
Alignment:
Q  43 ttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||||||||||||||||||||| |||||| |  ||||||| || |||| ||||||||||||||||||| |||||||    
T  9850781 ttaggtgcttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatc 9850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 9933596 - 9933671
Alignment:
Q  47 gtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||||| |||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| |||||||||||    
T  9933596 gtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattatatc 9933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 12850556 - 12850645
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||| ||||| |||||||| |||| |||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  12850556 tacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12850645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 16705890 - 16705801
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||  ||||||| ||||||  ||||||||| ||||| ||| ||||||||    
T  16705890 tacaattccttaggtgcttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgttatatcc 16705801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 22269879 - 22269790
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  22269879 tacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgttatatcc 22269790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 34490613 - 34490524
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||   |  |||||||||||| || ||||||||||||||| ||| ||||||||    
T  34490613 tacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttatatcc 34490524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 6605891 - 6605803
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||||||||||| |||||||||||| | ||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  6605891 tacaattctttaggtgctttttgtatggttcttact-aaatttaccatgatttcctcaaatgcataattttctcaaagtttgttatatcc 6605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 20893039 - 20892883
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgt 136  Q
    |||| ||||||||||||||||||| ||||||| ||||   | ||| ||||| |||||| ||||||||||||||| ||| ||||||||         ||||    
T  20893039 aattccttaggtgcttttcgtatgattcttaactaaaaatacaataatttcatcaaatccataattttctcaaagtttgttatatccataaaaat-atgt 20892941  T
Q  137 atttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    |||||||  ||||||||||       | |||||| |||||||||||||||||||||||    
T  20892940 atttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 20892883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 23836018 - 23835945
Alignment:
Q  50 cttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||||||| ||||  ||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  23836018 cttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 23835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 7116527 - 7116451
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| ||||| || |||||||||||||||||| |||||| |  || ||||| |||||| |||||||||||||||    
T  7116527 tacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccataattttctcaaa 7116451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 34455899 - 34455938
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  34455899 tacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 40362622 - 40362553
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||||||||||||| ||||||||  ||||||| |||||| |||||||||||||| | ||| ||||||    
T  40362622 ttttcgtatggttcttaactaaattcaccatgattttctcaaa-tcataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 9933726 - 9933687
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  9933726 tacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 16705747 - 16705786
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  16705747 tacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 20892898 - 20892937
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  20892898 tacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 23835890 - 23835929
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  23835890 tacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 24101989 - 24101950
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  24101989 tacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 43858591 - 43858548
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattca 77  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  43858591 tacaattccttaggtacttttcgtatggttcttaactaaattca 43858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 17500018 - 17500063
Alignment:
Q  32 aatacaattacttaggtgcttttcgtatggttcttaattaaattca 77  Q
    ||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  17500018 aatacaatttcttatgtgtttttcgtatggttcttaactaaattca 17500063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 7235 - 7154
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  7235 cttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 24836177 - 24836088
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  24836177 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 24836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 34052436 - 34052347
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  34052436 tacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 34052347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 35339292 - 35339381
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||| ||| ||||||||    
T  35339292 tacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgttatatcc 35339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 20184252 - 20184341
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  20184252 tacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 20184341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 30594850 - 30594761
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  30594850 tacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 30594761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 31231628 - 31231715
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||    
T  31231628 tacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 31231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 37093926 - 37093836
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| ||||||| |||||||||||||| |||| ||||||||  |||||||||||||||| |||||||||||||| ||| ||||||||    
T  37093926 atacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatatcc 37093836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 30259080 - 30259169
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  30259080 tacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 30259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 31521539 - 31521628
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| |||||| |  ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  31521539 tacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattatatcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 45997522 - 45997611
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| | || |||||||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||    
T  45997522 tacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatcc 45997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 40358264 - 40358184
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||||||||| |||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| |||||||    
T  40358264 cttaggtgcttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 9285740 - 9285886
Alignment:
Q  46 ggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgtatttttaac 145  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||| ||||| ||| ||||||||         |||||||||||      
T  9285740 ggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaat--atgtatttttatt 9285837  T
Q  146 taagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||||       ||||||||| |||||||||||| |||||||||    
T  9285838 taagaaccatacgaaaagtacctaaagaattgtacctaaattttctcct 9285886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 9289807 - 9289953
Alignment:
Q  46 ggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgtatttttaac 145  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||| ||||| ||| ||||||||         |||||||||||      
T  9289807 ggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaat--atgtatttttatt 9289904  T
Q  146 taagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||||       ||||||||| |||||||||||| |||||||||    
T  9289905 taagaaccatacgaaaagtacctaaagaattgtacctaaattttctcct 9289953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 33749784 - 33749713
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 38883378 - 38883289
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  38883378 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 38883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 10936484 - 10936570
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||  |||| ||||||||||  |||||||||||||| ||| |||||    
T  10936484 tacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcctcaaatctataattttctcaaagtttgttata 10936570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 3953056 - 3953145
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| || |||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||| |||| ||| ||||||||    
T  3953056 tacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatcc 3953145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 39617855 - 39617944
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| || | |||||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  39617855 tacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgttatatcc 39617944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 25742449 - 25742534
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||||    |||||||||||| ||||||||||||||| ||| ||||||||    
T  25742449 tacaatttcttaggtgtttttcctatggttcttaactaaattcat----atttcctcaaatccataattttctcaaagtttgttatatcc 25742534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 12142350 - 12142261
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| ||| ||||||||| |||||||| ||||||||  ||||||| ||||||| |||||||||||||||  || ||||||||    
T  12142350 tacaattccttatgtgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagattgttatatcc 12142261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 39143740 - 39143813
Alignment:
Q  48 tgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||||||||||||||| | ||||||||  || |||||||||||| |||||| |||||||| ||| ||||||    
T  39143740 tgcttttcgtatggttcttgactaaattcaccataatttcctcaaatccataatattctcaaagtttgttatat 39143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 48103522 - 48103436
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||||||||||| ||||||||||||| |||||||    |||||||||||||| ||||||  ||||||| ||| ||||||||    
T  48103522 tacaattctttaggtgctttttgtatggttcttaactaaattc---gtgatttcctcaaatccataataatctcaaagtttgttatatcc 48103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 24123769 - 24123858
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| || ||||| ||||||||| ||| ||||   |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  24123769 tacaattccttatgtactttttgtatggttcctaactaaaaatactatgatttcctcaaatccataattttctcaaagtttgttatatcc 24123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 10398462 - 10398390
Alignment:
Q  48 tgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||||| ||||||||||||| ||||||    ||||||||||||||| |||||| |||||||| ||| |||||    
T  10398462 tgctttttgtatggttcttaactaaattatccatgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 10936627 - 10936588
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  10936627 tacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 31231773 - 31231734
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  31231773 tacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 35665647 - 35665686
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  35665647 tacaattgcttaggtgcttttcgtatggttcttaactaaa 35665686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 38528569 - 38528530
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  38528569 tacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 22723239 - 22723328
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaat--tcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||||||  ||||||| |||||||||| ||||||| |||||  ||||  ||||||||| |||||  ||||||||||||| ||| |||||    
T  22723239 atacaattttttaggtgtttttcgtatgattcttaactaaatattcatcgtgatttccttaaatttttaattttctcaaagtttgttata 22723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 33721841 - 33721875
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaa 68  Q
    ||||||| |||||||||||||||||||||||||||    
T  33721841 tacaattccttaggtgcttttcgtatggttcttaa 33721875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 44148777 - 44148728
Alignment:
Q  61 gttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    |||||||||||||||||   ||||||||| |||| |||||||||||||||    
T  44148777 gttcttaattaaattcactgtgatttccttaaatccataattttctcaaa 44148728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 1403030 - 1402990
Alignment:
Q  80 atgatttcctcaaattcataattttctcaaaatttattata 120  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  1403030 atgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 3953200 - 3953160
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  3953200 atacaattacttaggtactttttgtatggttcttaactaaa 3953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 16876487 - 16876559
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||||||||||||| ||||||| |  ||||||| ||||||| | ||||||||| | | ||| ||||||||    
T  16876487 ttttcgtatggttcttacttaaatttaccatgattttctcaaatccgtaattttcttagagtttgttatatcc 16876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 15546789 - 15546700
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  15546789 tacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 15546700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 21379955 - 21380044
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||    
T  21379955 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatcc 21380044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 4890494 - 4890583
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||| |||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  4890494 tacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 4890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 13439853 - 13439694
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    |||||||||  ||||| |||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||         |    
T  13439853 tacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaat-a 13439755  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    |||||||||| |||||||||||       |||| |||  ||||||||||||||||||||||    
T  13439754 tgtatttttagctaagaaccatacgaaaagtacttaaggaattgtacctaagttttctcct 13439694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 14393718 - 14393632
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| ||||||||||||| ||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  14393718 aattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 14393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 885542 - 885453
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||| |||| ||||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  885542 tacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttgttatatcc 885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 8091219 - 8091130
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||   ||||||||| |||| ||||||||||||||| ||| ||||||||    
T  8091219 tacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttatatcc 8091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 3369142 - 3369055
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||  ||||||||||||||||| |||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||    
T  3369142 tacaattcgttaggtgcttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 3369055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 11687157 - 11687245
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  11687157 tacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 4239011 - 4238922
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||  |||||||| ||||||||||||||||||||||  ||||||| ||||||| | ||||||||||||| ||| ||||||||    
T  4239011 tacaattccttctgtgctttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatcc 4238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 7808766 - 7808677
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||   |  |||||||||||||||  |||||||||||||| ||| ||||||||    
T  7808766 tacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttatatcc 7808677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 13172605 - 13172676
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||||| ||| ||||||||    
T  13172605 ttttcgtatggttcttaactaaattcata-tcatttcctcaaatccataattttctcaaagtttgttatatcc 13172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 20501863 - 20501774
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||   |  |||||||| |||||| |||||||||||| || ||| ||||||||    
T  20501863 tacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttcttcaaatccataattttctcgaagtttgttatatcc 20501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 29609158 - 29609073
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattat 119  Q
    ||||||| ||||| |||||||||||||||| |||| ||||||||   ||||||||| |||| ||||||||||||||| ||| ||||    
T  29609158 tacaattccttagatgcttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 29609073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 6433806 - 6433754
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaat 94  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  6433806 cttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaaat 6433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 18998131 - 18998218
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| |||||||| |||||||| | ||||||| ||||||||  ||||||||||| ||| ||||||||||||||| ||| |||||||    
T  18998131 tacaattccttaggtgtttttcgtacg-ttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatc 18998218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 17279681 - 17279608
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| ||||||||   ||||||| |||||||| ||||||||| |||||||| |||||||||||||||| |||||    
T  17279681 tacaatttcttaggtg---ttcgtatagttcttaactaaattcatcatgatttcttcaaattcataattttatcaaa 17279608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 31764356 - 31764428
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| ||||||||||||| ||||||||  || |||| ||||||||||||||||||||||| ||| || |||||    
T  31764356 tttttgtatggttcttaactaaattcaccattattttctcaaattcataattttctcaaagtttgttgtatcc 31764428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 18998274 - 18998235
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  18998274 tacaattccttaggtgcttttcgtatggttcttaattaaa 18998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 6433707 - 6433749
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcata 79  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  6433707 aatttcttaggtgcttttcgtatggttcttaactaaattcata 6433749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 8091075 - 8091115
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  8091075 atacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 3368999 - 3369038
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  3368999 tacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 4890638 - 4890599
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  4890638 tacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 21380098 - 21380059
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  21380098 tacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 7187706 - 7187633
Alignment:
Q  47 gtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    |||||||| |||| ||| |||| |||||  |  ||||||| |||||||||||| |||||||||| |||||||||    
T  7187706 gtgctttttgtatagttattaactaaataaaccatgatttactcaaattcatatttttctcaaagtttattata 7187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 17367117 - 17367158
Alignment:
Q  80 atgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||||| |||||||||||||||||||||| ||| ||||||    
T  17367117 atgatttcatcaaattcataattttctcaaagtttgttatat 17367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 17279667 - 17279699
Alignment:
Q  165 acctaaaaaattgtacctaagttttctcctata 197  Q
    |||||| ||||||||||||||||||||||||||    
T  17279667 acctaagaaattgtacctaagttttctcctata 17279699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 18417814 - 18417725
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  18417814 tacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 18417725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 24969555 - 24969644
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  24969555 tacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 24969644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 20435153 - 20435312
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnc 132  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| || ||| ||||||||             
T  20435153 atacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttatatccaaaaaat-- 20435250  T
Q  133 atgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    |||||||||||  ||||||||||       | ||||||| ||||||||||||||||||||||    
T  20435251 atgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcct 20435312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 4688261 - 4688350
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||   ||||||||||||||||| |||||||||||| ||| ||||||||    
T  4688261 tacaatttcttaggtgcttttcgtatggttcttaactaaattcactgtgatttcctcaaattcacaattttctcaaagtttgttatatcc 4688350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 24915808 - 24915897
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  24915808 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 24915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 27434767 - 27434678
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |  || |||||||||||||||||||||||||||| ||| ||||||||    
T  27434767 tacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttatatcc 27434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 42274506 - 42274595
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  42274506 tacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 42274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 530683 - 530772
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||  || |||||||||||| ||||||||||||||| ||| ||||||||    
T  530683 tacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgttatatcc 530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 1299069 - 1298980
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  1299069 tacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 1298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 32318734 - 32318823
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||  |||||||||||| || ||||||||||||||| ||| ||||||||    
T  32318734 tacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttatatcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 3422443 - 3422531
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||||||||||||||| |||||| ||||    
T  3422443 tacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattgtatc 3422531  T

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Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 4552942 - 4552853
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||  ||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  4552942 tacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 4552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 9355567 - 9355652
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattat 119  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||  |||||||||| |||| ||||||||||||| ||||| ||||    
T  9355567 tacaattccttaggtgcttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 23928582 - 23928670
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| || |||||||||| ||||||| ||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||    
T  23928582 tacaattccttag-tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgttatatcc 23928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 55049414 - 55049503
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||  ||||||||| ||||| ||| ||||||||    
T  55049414 tacaattccttaggtgcttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgttatatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 55107681 - 55107592
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| ||||||||||| | |||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  55107681 tacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttatatcc 55107592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 21048719 - 21048807
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||  |||| ||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||| || ||| |||||||    
T  21048719 tacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgttatatc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 13204534 - 13204445
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| || |||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||| |||| ||| ||||||||    
T  13204534 tacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatcc 13204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 24294612 - 24294536
Alignment:
Q  46 ggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||| |||||||||||||||||| ||||||||  || |||||||||||||| ||||||||||||| ||| |||||||    
T  24294612 ggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatatc 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 35360833 - 35360745
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||  |||| || |||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| |||||||    
T  35360833 tacaattttttagttgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatc 35360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 28809860 - 28809950
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaatt-cataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||| |||| ||| |||| |||||| ||  ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  28809860 tacaatttcttaggtgcttttggtattgtttttaactaaatttcaccatgattttctcaaatccataattttctcaaaatttgttatatcc 28809950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 56552205 - 56552132
Alignment:
Q  47 gtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    |||||| ||||||||||||||| |||||| |  ||||||||||||||| ||||||||||||||| ||| |||||    
T  56552205 gtgcttatcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 4895113 - 4895042
Alignment:
Q  51 ttttcgtatggtt-cttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||||||| ||| ||||||    
T  4895113 ttttcgtatggtttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatat 4895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 2272523 - 2272434
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||  ||| |||||||||||||||||||||  ||||||||  |||||||||| |||| ||||||||| ||||| ||| || |||||    
T  2272523 tacaattcattatgtgcttttcgtatggttcttagctaaattcaccatgatttccttaaatccataattttatcaaagtttgttctatcc 2272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 1051203 - 1051275
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||  |||||||||||||| || |||||||| ||||||| |||||||||| ||| ||| | ||||||    
T  1051203 ttttcgtataattcttaattaaatttattatgatttcttcaaatttataattttcttaaagtttgtaatatcc 1051275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 52587466 - 52587430
Alignment:
Q  38 attacttaggtgcttttcgtatggttcttaattaaat 74  Q
    ||||||||||||||||||||||||||||||| |||||    
T  52587466 attacttaggtgcttttcgtatggttcttaactaaat 52587430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 530826 - 530787
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  530826 tacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 18417671 - 18417710
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  18417671 tacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 43486214 - 43486273
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaa 93  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||  ||||||| ||||||    
T  43486214 tacaattccttaggtacttttcctatggttcttaactaaattcaccatgattttctcaaa 43486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 52824253 - 52824292
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  52824253 tacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 52824347 - 52824308
Alignment:
Q  83 atttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc 52824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 28573961 - 28573994
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttctta 67  Q
    ||||||||||||||||||||||| ||||||||||    
T  28573961 tacaattacttaggtgcttttcgcatggttctta 28573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 13204390 - 13204430
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  13204390 atacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 16995580 - 16995656
Alignment:
Q  46 ggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||| ||||||||||||| |||||||||||||  ||||||| ||||||  ||| ||||| ||| | ||| |||||||    
T  16995580 ggtgtttttcgtatggtttttaattaaattcaacatgattttctcaaacccatcattttttcagagtttgttatatc 16995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 51276719 - 51276796
Alignment:
Q  44 taggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  51276719 taggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattatat 51276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 3607746 - 3607901
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgt 136  Q
    |||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||         ||||    
T  3607746 aatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaat--atgt 3607843  T
Q  137 atttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    |||||||  ||||||||||       | |||||| |||||||||||||||||||||||    
T  3607844 atttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 3607901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 15324784 - 15324625
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||         |    
T  15324784 tacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaat-a 15324686  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||||  ||||||||||       | |||||| |||||||||||||||||||||||    
T  15324685 tgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 15324625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 1387935 - 1387846
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||   |  ||||||||||||||||||||||||||||||| ||||||||||||    
T  1387935 tacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattatatcc 1387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 2854546 - 2854635
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| | ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  2854546 tacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 2854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 14387029 - 14387118
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||| ||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||    
T  14387029 tacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatcc 14387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 23698516 - 23698605
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| | ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  23698516 tacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 23698605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 27240938 - 27241027
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  27240938 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 27241027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 47940584 - 47940673
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  47940584 tacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatcc 47940673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 48954228 - 48954317
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  48954228 tacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 48954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 19954925 - 19955083
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnnca 133  Q
    ||||||| |||| ||||||||||||| |||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||         |    
T  19954925 tacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaat--a 19955022  T
Q  134 tgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||||  ||||||||||       ||||||||  ||||||||||||||||||||||    
T  19955023 tgtatttttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttctcct 19955083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 5189626 - 5189537
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||||    
T  5189626 tacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatcc 5189537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 9978065 - 9978154
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||||||||| ||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  9978065 tacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatcc 9978154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 42561309 - 42561398
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  |||||||| ||| || ||||||||||||||| ||| ||||||||    
T  42561309 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatcc 42561398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 40647275 - 40647188
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||||| ||||||||||||||||||| || |||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||    
T  40647275 tacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 40647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 6079526 - 6079452
Alignment:
Q  49 gcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  6079526 gcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 6079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 27670299 - 27670213
Alignment:
Q  35 acaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    |||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||| |||| ||||||||||||||| ||| ||||||    
T  27670299 acaattccttatgtgcttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagttttttatat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 957747 - 957658
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||| |||||||| |||||||||| ||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| |||||||    
T  957747 atacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 4299413 - 4299495
Alignment:
Q  41 acttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| |||||||||||| |||||| ||||||||  || |||||||||||| ||||||||||||||| ||| ||||||||    
T  4299413 acttaggtacttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatcc 4299495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 26208579 - 26208493
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| |||||||||||||||||||||||| || ||||||||  || ||||| |||||| ||||||||||||||| ||| ||||||||    
T  26208579 aattccttaggtgcttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgttatatcc 26208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 50627288 - 50627199
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||  ||||||||||||||||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  50627288 tacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 50627199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 2125084 - 2125172
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||  |||||||  | ||||| |||||||||||||| ||| |||||||    
T  2125084 tacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatgatttttttaaatttataattttctcaaagtttgttatatc 2125172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 48645036 - 48645116
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    ||||||||||||||||||| ||||||| ||||   || ||||||||||||||| ||||||||||||||| ||| |||||||    
T  48645036 cttaggtgcttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 48645116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 50856344 - 50856424
Alignment:
Q  43 ttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||||||||||| ||||||  ||||||||  || |||||||||| | ||||||||||||||||||| ||||||||    
T  50856344 ttaggtgcttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatttgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 51789611 - 51789687
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| |||||||| ||||||||||||| |||| ||||||||  ||||||||||||| | |||||||||||||||    
T  51789611 tacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcctcaattccataattttctcaaa 51789687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 27926268 - 27926353
Alignment:
Q  37 aattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||| |||| |||||||||||||||||||||| ||||||||   |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  27926268 aattccttatgtgcttttcgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttatatcc 27926353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 27928311 - 27928400
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| |||| |||||||| ||||||||||||| ||||||||   |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  27928311 atacaattccttatgtgctttttgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttatatcc 27928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 19796995 - 19797084
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||||||||||| |||| ||||   |  ||||||||||||||| ||||||||| ||||| ||| ||||||||    
T  19796995 tacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttatatcc 19797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 36880668 - 36880592
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| ||||| ||||||||||||||||||||| ||||   |  ||||||||||||||| |||||||||||||||    
T  36880668 tacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaa 36880592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 49284308 - 49284397
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||| || |||| ||||||||||||| ||||||||  ||||||| || |||| ||||||||| ||||| ||| ||||||||    
T  49284308 tacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 50162552 - 50162641
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||  |||| |||||||| |||||||||||||   |||||| |||||||  |||||||||||||| ||| ||||||||    
T  50162552 tacaattccttaggtattttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgttatatcc 50162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 28431733 - 28431805
Alignment:
Q  51 ttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||||| || |||| ||||||||| |||||||| ||||||  |||||||| | ||||||||||||||||    
T  28431733 ttttcgtatgatttttaactaaattcatcatgatttcttcaaatctataatttttttaaaatttattatatcc 28431805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 21930535 - 21930492
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattca 77  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  21930535 tacaattacttaggtgtttttcgtatggttcttaactaaattca 21930492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 2302533 - 2302484
Alignment:
Q  61 gttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||||  |||||||  |||||||||||||||||||||||||||||||    
T  2302533 gttcttaacaaaattcaccatgatttcctcaaattcataattttctcaaa 2302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 197
Target Start/End: Complemental strand, 9895364 - 9895249
Alignment:
Q  80 atgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgtatttttaactaagaaccatnnnnnnngtacctaaaaaattgta 179  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||          |||||||||||  ||||||||||       |||||||||||||| ||    
T  9895364 atgatttcctcaaatacataattttctcaaagtttgttatatc--aaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaattata 9895267  T
Q  180 cctaagttttctcctata 197  Q
    ||||| ||||||||||||    
T  9895266 cctaaattttctcctata 9895249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 3607886 - 3607847
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  3607886 tacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5189483 - 5189522
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  5189483 tacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 9978209 - 9978170
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  9978209 tacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 15324640 - 15324679
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  15324640 tacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 19797138 - 19797099
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  19797138 tacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 27926409 - 27926370
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  27926409 tacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 49285132 - 49285093
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaa 73  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  49285132 tacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 36007842 - 36007920
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattata 120  Q
    |||||||| |||| ||| ||||||||| |||| |    ||||||||||||||| ||||||||||||||| ||| |||||    
T  36007842 cttaggtgtttttggtacggttcttaactaaactatccatgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 29598450 - 29598393
Alignment:
Q  64 cttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatat 121  Q
    ||||| ||||||||  |||||||||| |||| ||||||||||||||| ||| ||||||    
T  29598450 cttaactaaattcactatgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 51276852 - 51276819
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttctta 67  Q
    ||||||| ||||||||||||||||||||||||||    
T  51276852 tacaatttcttaggtgcttttcgtatggttctta 51276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 18651310 - 18651350
Alignment:
Q  80 atgatttcctcaaattcataattttctcaaaatttattata 120  Q
    ||||||||| ||||| ||||||||||||||||||| |||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 22338998 - 22339074
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaa 110  Q
    ||||||| || || |||||||||  |||||||||| |||| |||  |||||||| |||||| ||| |||||||||||    
T  22338998 tacaattcctaagttgcttttcgattggttcttaactaaactcaccatgatttcatcaaatccatcattttctcaaa 22339074  T

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Target: scaffold0122 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 45991 - 45902
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  45991 tacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 45902  T

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Target: scaffold0107 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 51220 - 51131
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||  |||||||||| |||||||||||||||||||| ||| ||||||||    
T  51220 tacaattccttaggtacttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgttatatcc 51131  T

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Target: scaffold0653 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 3419 - 3565
Alignment:
Q  46 ggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatccnnnnnnnncatgtatttttaac 145  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||| ||||| ||| ||||||||         |||||||||||      
T  3419 ggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaat--atgtatttttatt 3516  T
Q  146 taagaaccatnnnnnnngtacctaaaaaattgtacctaagttttctcct 194  Q
    ||||||||||       ||||||||| |||||||||||| |||||||||    
T  3517 taagaaccatacgaaaagtacctaaagaattgtacctaaattttctcct 3565  T

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Target: scaffold0086 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 48284 - 48194
Alignment:
Q  33 atacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    |||||||| ||||| |||||||||||| |||||||| ||||||||  ||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  48284 atacaattccttagatgcttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 48194  T

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Target: scaffold0163 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 1962 - 2041
Alignment:
Q  43 ttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatc 122  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||||||||| |||||||||| |||| ||| |||||||    
T  1962 ttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatc 2041  T

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Target: scaffold0595 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 5854 - 5797
Alignment:
Q  42 cttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcata 99  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  5854 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 5797  T

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Target: scaffold0137 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 10272 - 10183
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||| |||||||||||||  ||||||| ||||||||  ||||||| |||| || ||||||||||||||| ||| ||||||||    
T  10272 tacaatttcttatgtgcttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagtttgttatatcc 10183  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 138291 - 138380
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| |||||| |||||||||||| ||||||| ||||||||| ||||||| || |||| |||| |||| | ||| ||||||||||||    
T  138291 tacaattccttaggagcttttcgtatgattcttaactaaattcatcatgattttcttaaatccatattttttttaaagtttattatatcc 138380  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 14599 - 14510
Alignment:
Q  34 tacaattacttaggtgcttttcgtatggttcttaattaaattcataatgatttcctcaaattcataattttctcaaaatttattatatcc 123  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||  || | ||| ||| || ||||||||||||||| | | ||||||||    
T  14599 tacaattccttgggtgcttttcgtatcgttcttaactaaattcaccattacttcgtcatatccataattttctcaaagtctgttatatcc 14510  T

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