View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16976_high_18 (Length: 385)
Name: NF16976_high_18
Description: NF16976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16976_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 7384671 - 7384309
Alignment:
| Q |
1 |
agtcgagtaagaaaattgatacctgttgctttgaagcataagaagaatggcttaaagaatcaatgtcttcgagcgttatcacagagaccgttgattcaga |
100 |
Q |
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| T |
7384671 |
agtcgagtaagaaaatttatacctgttgctttgaagcgcaagaagaatggcttaaagaatcaatgtctccgagtgttattacagagacctttgattcaga |
7384572 |
T |
|
| Q |
101 |
ttgctgcatggttgaagtattatccgagcaactcacaagtttagtctttgcatccaacaccaataaatcaactgatgaatcaagagacatggcaattttc |
200 |
Q |
| |
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||||| |||||||||||||||| || || | || | |||| ||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||| |
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| T |
7384571 |
ttgctcagtggttgaagtattatcggaacatccaacgactttactctttgcatccaacaccaagaaatcaaccgatgaaccaagagacatggtaattttc |
7384472 |
T |
|
| Q |
201 |
ttagacatgtcaccatcttcattgttcttcacgtcttcattcatcaggcatgtctgctgcaagatctgactttctatgaaggaaggtgaaggatccgagc |
300 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7384471 |
ttagaaatgtcaccatcttcattgttcttcacgtcttcattcatcagacatgtctgctgcaagatctgactttctatgaaggaaggtgaaggatccgagc |
7384372 |
T |
|
| Q |
301 |
ttgacaagtgagaaagcatcggttccgtttcagacatatcattcctgtaacatctcttcttca |
363 |
Q |
| |
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||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
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| T |
7384371 |
ttgacaattgagaaagcatcggttccgtttcggacaaatcattcctgtaacatctcttcttca |
7384309 |
T |
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