View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16976_high_5 (Length: 600)

Name: NF16976_high_5
Description: NF16976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16976_high_5
NF16976_high_5
[»] chr3 (65 HSPs)
chr3 (27-491)||(227331-227792)
chr3 (49-488)||(10509215-10509656)
chr3 (49-488)||(39586276-39586714)
chr3 (49-488)||(149030-149467)
chr3 (52-490)||(41193717-41194153)
chr3 (49-488)||(40936920-40937358)
chr3 (52-488)||(32529508-32529937)
chr3 (49-378)||(47646728-47647060)
chr3 (52-483)||(39353013-39353435)
chr3 (49-440)||(26502185-26502578)
chr3 (52-490)||(49166110-49166540)
chr3 (49-369)||(47013712-47014032)
chr3 (57-488)||(31765207-31765632)
chr3 (49-354)||(36402704-36403010)
chr3 (52-452)||(6936214-6936605)
chr3 (237-446)||(41174565-41174773)
chr3 (350-488)||(53814654-53814792)
chr3 (86-207)||(41174792-41174913)
chr3 (69-207)||(33843499-33843637)
chr3 (236-488)||(21980080-21980325)
chr3 (236-488)||(22002511-22002756)
chr3 (390-488)||(36403016-36403114)
chr3 (113-208)||(25214595-25214690)
chr3 (402-488)||(47646655-47646741)
chr3 (113-203)||(51328989-51329079)
chr3 (122-348)||(53393794-53394013)
chr3 (236-488)||(9126738-9126984)
chr3 (236-488)||(9134845-9135091)
chr3 (113-206)||(42899201-42899294)
chr3 (236-488)||(49440449-49440695)
chr3 (236-348)||(49327495-49327602)
chr3 (236-488)||(21450342-21450588)
chr3 (238-348)||(26982508-26982613)
chr3 (239-348)||(44207773-44207877)
chr3 (236-348)||(8486688-8486795)
chr3 (236-348)||(3733707-3733814)
chr3 (394-488)||(47375059-47375153)
chr3 (236-348)||(2182927-2183034)
chr3 (236-344)||(9116993-9117096)
chr3 (236-488)||(18875739-18875984)
chr3 (394-488)||(44207920-44208014)
chr3 (394-477)||(9116863-9116946)
chr3 (135-206)||(10494800-10494871)
chr3 (236-346)||(48062025-48062130)
chr3 (284-348)||(16481236-16481300)
chr3 (536-579)||(227243-227286)
chr3 (151-206)||(12717635-12717690)
chr3 (150-193)||(27023918-27023961)
chr3 (394-464)||(16481121-16481191)
chr3 (157-207)||(26982429-26982479)
chr3 (89-206)||(45405668-45405785)
chr3 (236-344)||(33843365-33843468)
chr3 (394-484)||(33186516-33186606)
chr3 (309-348)||(47374975-47375014)
chr3 (122-207)||(49327373-49327457)
chr3 (122-206)||(9127025-9127108)
chr3 (122-206)||(9135132-9135215)
chr3 (235-281)||(42899127-42899173)
chr3 (236-265)||(10494899-10494928)
chr3 (236-265)||(12717578-12717607)
chr3 (315-348)||(33186651-33186684)
chr3 (116-207)||(44207641-44207731)
chr3 (6-50)||(149737-149781)
chr3 (236-336)||(45405824-45405919)
chr3 (288-344)||(51329151-51329207)
[»] chr4 (64 HSPs)
chr4 (49-488)||(35158421-35158860)
chr4 (49-488)||(52416927-52417367)
chr4 (49-487)||(40727729-40728167)
chr4 (49-479)||(31092818-31093247)
chr4 (49-484)||(51538352-51538786)
chr4 (49-488)||(28780772-28781205)
chr4 (49-470)||(30003332-30003754)
chr4 (49-488)||(1602492-1602924)
chr4 (49-464)||(16023600-16024014)
chr4 (49-488)||(9036094-9036533)
chr4 (52-490)||(38551270-38551699)
chr4 (49-456)||(43841871-43842280)
chr4 (56-488)||(55136369-55136802)
chr4 (49-416)||(33280862-33281227)
chr4 (52-488)||(4189874-4190303)
chr4 (52-488)||(38218262-38218702)
chr4 (49-488)||(45228793-45229211)
chr4 (49-488)||(49374027-49374458)
chr4 (68-488)||(16451639-16452052)
chr4 (52-488)||(45924307-45924736)
chr4 (225-488)||(45029192-45029455)
chr4 (53-440)||(56463647-56464028)
chr4 (52-488)||(15542841-15543270)
chr4 (52-488)||(28310890-28311320)
chr4 (52-416)||(6963235-6963592)
chr4 (52-488)||(35319896-35320324)
chr4 (52-484)||(4047846-4048271)
chr4 (52-483)||(168540-168973)
chr4 (52-333)||(2013733-2014007)
chr4 (49-207)||(45462234-45462392)
chr4 (225-363)||(45461323-45461462)
chr4 (358-488)||(45458044-45458174)
chr4 (330-486)||(2016063-2016218)
chr4 (113-207)||(39807338-39807432)
chr4 (113-206)||(40602725-40602818)
chr4 (236-464)||(47985861-47986083)
chr4 (358-478)||(27283659-27283779)
chr4 (116-206)||(20516650-20516743)
chr4 (236-484)||(40693162-40693404)
chr4 (236-348)||(38990832-38990939)
chr4 (236-489)||(17646901-17647146)
chr4 (236-348)||(13721192-13721300)
chr4 (89-193)||(34953601-34953705)
chr4 (236-344)||(53511375-53511478)
chr4 (113-203)||(56084099-56084189)
chr4 (235-348)||(45659693-45659801)
chr4 (135-193)||(49604495-49604553)
chr4 (309-488)||(16684494-16684672)
chr4 (236-344)||(39807459-39807562)
chr4 (236-348)||(51888955-51889062)
chr4 (284-348)||(55614073-55614137)
chr4 (306-348)||(53269248-53269290)
chr4 (394-464)||(55614182-55614252)
chr4 (435-488)||(33280806-33280859)
chr4 (5-50)||(56463331-56463376)
chr4 (408-489)||(42660143-42660228)
chr4 (444-487)||(38991028-38991071)
chr4 (12-50)||(4048559-4048597)
chr4 (122-206)||(13721344-13721427)
chr4 (235-265)||(20516592-20516622)
chr4 (394-484)||(53269114-53269204)
chr4 (132-181)||(9183338-9183387)
chr4 (447-487)||(13721061-13721101)
chr4 (237-265)||(34953746-34953774)
[»] chr7 (38 HSPs)
chr7 (49-488)||(46254569-46255009)
chr7 (52-488)||(35794180-35794616)
chr7 (49-484)||(34847869-34848305)
chr7 (49-488)||(36312076-36312514)
chr7 (49-488)||(43457890-43458326)
chr7 (51-488)||(14816652-14817080)
chr7 (51-488)||(15263648-15264076)
chr7 (116-473)||(44862735-44863090)
chr7 (49-412)||(25529103-25529462)
chr7 (49-488)||(33950633-33951074)
chr7 (287-469)||(43269984-43270166)
chr7 (106-406)||(42321186-42321479)
chr7 (236-470)||(15032723-15032951)
chr7 (69-184)||(1377355-1377470)
chr7 (89-203)||(1852136-1852250)
chr7 (236-488)||(38257614-38257860)
chr7 (242-484)||(26791707-26791943)
chr7 (104-206)||(31326672-31326774)
chr7 (238-471)||(37998394-37998621)
chr7 (236-488)||(7255581-7255827)
chr7 (113-207)||(26188232-26188326)
chr7 (89-206)||(19646929-19647046)
chr7 (237-348)||(29332463-29332569)
chr7 (236-484)||(35585241-35585484)
chr7 (114-203)||(1906590-1906679)
chr7 (113-206)||(3601033-3601126)
chr7 (236-348)||(43749373-43749480)
chr7 (151-207)||(10907012-10907068)
chr7 (236-348)||(108549-108656)
chr7 (122-207)||(26791986-26792070)
chr7 (394-440)||(43749525-43749571)
chr7 (236-265)||(1852071-1852100)
chr7 (236-265)||(1869322-1869351)
chr7 (239-344)||(26188356-26188456)
chr7 (447-488)||(29332640-29332681)
chr7 (308-344)||(1377287-1377323)
chr7 (122-206)||(7255449-7255532)
chr7 (6-50)||(44866459-44866503)
[»] chr5 (55 HSPs)
chr5 (62-488)||(12723374-12723802)
chr5 (49-488)||(12784857-12785298)
chr5 (49-488)||(18808682-18809125)
chr5 (49-488)||(13822066-13822506)
chr5 (80-488)||(16513620-16514028)
chr5 (63-471)||(3556341-3556748)
chr5 (49-464)||(8734420-8734834)
chr5 (52-488)||(37030261-37030683)
chr5 (52-488)||(8197111-8197549)
chr5 (49-450)||(27114045-27114445)
chr5 (52-489)||(26278743-26279172)
chr5 (49-440)||(38679446-38679839)
chr5 (49-378)||(37012642-37012965)
chr5 (52-488)||(37883130-37883562)
chr5 (139-440)||(8300857-8301149)
chr5 (52-469)||(25977135-25977541)
chr5 (52-490)||(9715312-9715729)
chr5 (140-488)||(2606076-2606417)
chr5 (52-410)||(11719938-11720288)
chr5 (236-488)||(1711398-1711644)
chr5 (284-488)||(5343964-5344167)
chr5 (350-488)||(15858590-15858728)
chr5 (128-207)||(15858801-15858880)
chr5 (394-488)||(29047356-29047450)
chr5 (402-484)||(37012573-37012655)
chr5 (236-456)||(24856094-24856308)
chr5 (122-205)||(27495146-27495229)
chr5 (49-149)||(8299216-8299319)
chr5 (391-488)||(13654685-13654782)
chr5 (106-203)||(23252461-23252558)
chr5 (236-348)||(6432592-6432698)
chr5 (236-348)||(32746687-32746794)
chr5 (122-203)||(32695017-32695099)
chr5 (284-348)||(38984209-38984274)
chr5 (127-207)||(22911851-22911931)
chr5 (236-348)||(27948435-27948541)
chr5 (104-203)||(27690485-27690584)
chr5 (399-489)||(8551245-8551335)
chr5 (428-490)||(11720287-11720349)
chr5 (239-287)||(15858730-15858778)
chr5 (89-177)||(23344821-23344909)
chr5 (112-207)||(41616070-41616163)
chr5 (12-50)||(25976807-25976845)
chr5 (151-203)||(27948579-27948631)
chr5 (236-287)||(31471705-31471756)
chr5 (104-175)||(32285511-32285582)
chr5 (394-489)||(38984071-38984165)
chr5 (394-488)||(6432743-6432836)
chr5 (394-488)||(31471801-31471895)
chr5 (5-50)||(18809391-18809436)
chr5 (236-336)||(22911956-22912051)
chr5 (236-265)||(23252401-23252430)
chr5 (308-340)||(27495017-27495049)
chr5 (112-207)||(31471575-31471668)
chr5 (135-206)||(38984355-38984424)
[»] chr8 (45 HSPs)
chr8 (49-488)||(40105246-40105683)
chr8 (49-488)||(8239984-8240422)
chr8 (49-488)||(39318592-39319030)
chr8 (86-488)||(32946781-32947183)
chr8 (49-470)||(35684012-35684431)
chr8 (49-420)||(39260286-39260658)
chr8 (52-490)||(32337514-32337948)
chr8 (52-488)||(6347004-6347433)
chr8 (52-488)||(43098545-43098973)
chr8 (52-460)||(23144107-23144508)
chr8 (69-490)||(586428-586843)
chr8 (52-490)||(627079-627512)
chr8 (152-488)||(42131968-42132300)
chr8 (52-338)||(37098194-37098471)
chr8 (236-488)||(20091270-20091517)
chr8 (225-488)||(29544109-29544365)
chr8 (167-464)||(13546304-13546594)
chr8 (167-464)||(13677879-13678169)
chr8 (49-269)||(11076150-11076369)
chr8 (52-206)||(31701047-31701198)
chr8 (52-183)||(20091867-20091998)
chr8 (236-488)||(11908-12154)
chr8 (390-488)||(37098101-37098199)
chr8 (236-336)||(31701237-31701332)
chr8 (113-191)||(28284449-28284527)
chr8 (236-348)||(4258893-4259001)
chr8 (236-348)||(24830602-24830708)
chr8 (115-193)||(11457022-11457100)
chr8 (121-206)||(4258769-4258854)
chr8 (238-350)||(23421132-23421240)
chr8 (52-102)||(13546259-13546309)
chr8 (52-102)||(13678164-13678214)
chr8 (236-342)||(42190400-42190501)
chr8 (158-207)||(38225247-38225296)
chr8 (308-344)||(26911705-26911741)
chr8 (308-340)||(38225390-38225422)
chr8 (156-188)||(42131939-42131971)
chr8 (236-344)||(21269172-21269275)
chr8 (310-344)||(11456869-11456903)
chr8 (394-488)||(23421283-23421377)
chr8 (113-203)||(38621601-38621691)
chr8 (434-488)||(39260656-39260709)
chr8 (122-207)||(24830746-24830830)
chr8 (116-207)||(42190539-42190629)
chr8 (396-460)||(28284210-28284274)
[»] chr6 (22 HSPs)
chr6 (49-488)||(31271053-31271490)
chr6 (49-488)||(303457-303898)
chr6 (49-488)||(31722865-31723303)
chr6 (57-488)||(438748-439167)
chr6 (49-416)||(16395093-16395459)
chr6 (53-207)||(31318517-31318671)
chr6 (49-207)||(9304950-9305108)
chr6 (225-484)||(9305134-9305388)
chr6 (236-485)||(31318235-31318478)
chr6 (69-206)||(20818516-20818653)
chr6 (239-488)||(34949239-34949482)
chr6 (239-408)||(12305267-12305430)
chr6 (236-484)||(480030-480271)
chr6 (236-488)||(29435805-29436051)
chr6 (104-206)||(17519837-17519939)
chr6 (236-348)||(13036738-13036845)
chr6 (104-203)||(6837251-6837350)
chr6 (394-484)||(13036603-13036693)
chr6 (113-198)||(28546865-28546949)
chr6 (5-50)||(439445-439490)
chr6 (122-176)||(480339-480393)
chr6 (308-344)||(6837446-6837482)
[»] chr2 (52 HSPs)
chr2 (49-488)||(15911486-15911919)
chr2 (52-488)||(13278398-13278831)
chr2 (107-484)||(38207197-38207567)
chr2 (49-488)||(45116788-45117218)
chr2 (52-490)||(7942742-7943171)
chr2 (49-368)||(44759915-44760233)
chr2 (52-374)||(17137702-17138030)
chr2 (49-378)||(30490674-30491005)
chr2 (56-489)||(18137298-18137722)
chr2 (52-490)||(31994077-31994507)
chr2 (52-314)||(6403992-6404253)
chr2 (49-346)||(17308798-17309100)
chr2 (62-488)||(1209941-1210364)
chr2 (265-488)||(38707426-38707649)
chr2 (307-488)||(6402586-6402767)
chr2 (49-270)||(38703581-38703803)
chr2 (354-484)||(17304598-17304728)
chr2 (237-381)||(1114576-1114717)
chr2 (89-206)||(21485295-21485412)
chr2 (365-485)||(44754010-44754130)
chr2 (104-203)||(33945914-33946013)
chr2 (236-489)||(34906045-34906290)
chr2 (104-206)||(37127944-37128046)
chr2 (86-175)||(1114722-1114811)
chr2 (236-488)||(5464564-5464809)
chr2 (236-484)||(43333528-43333769)
chr2 (236-348)||(5939259-5939366)
chr2 (424-488)||(17138041-17138105)
chr2 (236-348)||(18963192-18963299)
chr2 (236-348)||(24168355-24168461)
chr2 (236-348)||(34948329-34948436)
chr2 (116-193)||(21649744-21649821)
chr2 (236-348)||(16739565-16739673)
chr2 (284-348)||(15113566-15113630)
chr2 (236-348)||(45526161-45526268)
chr2 (112-206)||(34948476-34948568)
chr2 (236-346)||(41961542-41961647)
chr2 (236-348)||(17230199-17230306)
chr2 (112-206)||(16739457-16739548)
chr2 (123-207)||(24168499-24168583)
chr2 (236-488)||(16252545-16252791)
chr2 (132-203)||(18963339-18963410)
chr2 (49-111)||(38208410-38208475)
chr2 (112-206)||(34906329-34906421)
chr2 (396-459)||(21650006-21650069)
chr2 (425-488)||(24167095-24167158)
chr2 (122-207)||(43333807-43333891)
chr2 (89-206)||(15257143-15257260)
chr2 (236-265)||(16414242-16414271)
chr2 (430-490)||(1114495-1114555)
chr2 (116-206)||(15113395-15113484)
chr2 (390-454)||(33945671-33945735)
[»] chr1 (67 HSPs)
chr1 (49-488)||(44496189-44496626)
chr1 (49-484)||(29961104-29961538)
chr1 (49-488)||(14587334-14587778)
chr1 (49-488)||(37952005-37952441)
chr1 (49-488)||(42882587-42883024)
chr1 (49-488)||(3517572-3518010)
chr1 (49-473)||(12700533-12700963)
chr1 (49-488)||(33801065-33801507)
chr1 (104-488)||(44757583-44757965)
chr1 (49-440)||(41723280-41723671)
chr1 (52-488)||(38860386-38860814)
chr1 (52-489)||(49851416-49851846)
chr1 (146-488)||(22858461-22858801)
chr1 (52-488)||(11952421-11952844)
chr1 (73-469)||(12528174-12528562)
chr1 (54-463)||(52632362-52632761)
chr1 (52-410)||(41090955-41091305)
chr1 (237-488)||(48965075-48965326)
chr1 (52-410)||(41086187-41086537)
chr1 (52-469)||(41900288-41900696)
chr1 (68-489)||(27216505-27216920)
chr1 (52-463)||(23984039-23984440)
chr1 (52-207)||(50261992-50262147)
chr1 (309-490)||(50262177-50262357)
chr1 (308-472)||(46597388-46597551)
chr1 (236-488)||(5749975-5750221)
chr1 (236-487)||(22335083-22335328)
chr1 (236-485)||(18271979-18272222)
chr1 (236-485)||(18276633-18276876)
chr1 (236-488)||(3475447-3475693)
chr1 (236-408)||(29250486-29250653)
chr1 (119-207)||(30518205-30518293)
chr1 (113-193)||(34549851-34549931)
chr1 (136-207)||(48964984-48965055)
chr1 (236-346)||(10223349-10223454)
chr1 (394-488)||(29947018-29947111)
chr1 (236-488)||(12525087-12525332)
chr1 (236-486)||(39597923-39598166)
chr1 (284-489)||(7564811-7565012)
chr1 (236-484)||(10313271-10313513)
chr1 (249-348)||(30518293-30518387)
chr1 (236-348)||(7199658-7199765)
chr1 (69-193)||(41366790-41366914)
chr1 (394-459)||(14270189-14270254)
chr1 (49-110)||(48964925-48964986)
chr1 (236-490)||(22817656-22817903)
chr1 (394-488)||(4851572-4851665)
chr1 (89-207)||(29913810-29913928)
chr1 (122-207)||(12524965-12525049)
chr1 (238-489)||(21187206-21187447)
chr1 (122-207)||(22334962-22335046)
chr1 (236-348)||(14270297-14270404)
chr1 (236-344)||(29913676-29913779)
chr1 (308-344)||(33936756-33936792)
chr1 (122-207)||(3475323-3475407)
chr1 (122-207)||(18272261-18272345)
chr1 (122-207)||(18276915-18276999)
chr1 (49-88)||(22858800-22858839)
chr1 (122-207)||(29946825-29946909)
chr1 (122-207)||(39598204-39598288)
chr1 (429-488)||(41086123-41086182)
chr1 (429-488)||(41090891-41090950)
chr1 (394-488)||(50890246-50890340)
chr1 (5-50)||(41723899-41723944)
chr1 (104-193)||(48892096-48892185)
chr1 (136-207)||(29250678-29250747)
chr1 (236-280)||(41366716-41366760)
[»] scaffold1301 (2 HSPs)
scaffold1301 (49-403)||(1449-1796)
scaffold1301 (419-488)||(1377-1445)
[»] scaffold0054 (2 HSPs)
scaffold0054 (97-206)||(19067-19176)
scaffold0054 (308-344)||(19271-19307)
[»] scaffold0210 (2 HSPs)
scaffold0210 (106-206)||(8164-8264)
scaffold0210 (288-345)||(8341-8398)
[»] scaffold0160 (1 HSPs)
scaffold0160 (113-206)||(17301-17394)
[»] scaffold0048 (1 HSPs)
scaffold0048 (113-206)||(51825-51916)
[»] scaffold0001 (2 HSPs)
scaffold0001 (113-190)||(427244-427321)
scaffold0001 (308-344)||(427432-427468)
[»] scaffold0168 (1 HSPs)
scaffold0168 (236-488)||(11906-12152)


Alignment Details
Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 27 - 491
Target Start/End: Complemental strand, 227792 - 227331
Alignment:
Q  27 atggtggggtttggaaggctatttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggactt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  227792 atggtggggtttggaaggctatttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggactt 227693  T
Q  127 gttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnag 226  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |               ||    
T  227692 gttttaggctataaatagacttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-ag 227594  T
Q  227 gggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagaga 326  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  227593 gggtgtcgatggtgtcatggtcattgtcgaccgttcataggaaccctgcaattacaatgcattgcagcttgtgtggggttcatataacggtcaacagaga 227494  T
Q  327 cccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccgg 426  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  227493 cccttgacatcaaagaaaaacacagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaa--tagtccggattatgtaatccgg 227396  T
Q  427 accaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaaag 491  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  227395 accaggagtattttagtaaattttgcaaggcacgcgaggaggcagcatggtgggaaaagtaaaag 227331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 10509215 - 10509656
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  10509215 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttcttttaggctataaatagg 10509314  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |                | ||||||||||||||||||    
T  10509315 cttctatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagttttttg-gaggtgtcgatggtgtcatg 10509413  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  10509414 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtctggggttcatataacggtcaacagagacccttgacatcaaagaaag 10509513  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| |||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  10509514 acacagaaaattacataacatctggtccagatgtctgtttccgaaaatcactaacaatctaatccggattatgtaatccggaccaggagtattttagtaa 10509613  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||| || ||||||| |||||||| ||||| ||||||||    
T  10509614 attttgcaaggggcgcgagaaggcagcagggtggaaaaagtaa 10509656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 39586714 - 39586276
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||| |||||||||||||||    
T  39586714 ttcagagccattaatgtgggtttggatggttacaaccactaacacggtttcattgactgtattaatgacctaggatttgttttaagctataaataggctt 39586615  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    |||| || ||||||||| ||||||||||| ||||||| ||||||| |||||| |||||| |               ||||||||||||||||||||||||    
T  39586614 ccattttcaacaaatactttcattcttcaattcacctattttcttacattttattcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 39586516  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39586515 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagaca 39586416  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||| ||||| |||||||| |||||    
T  39586415 tggaaaattacataacatctggtccggatttctgttttcggaaatcactaacaatcttgtatggattatgtaatccggatcagggttattttagaaaatt 39586316  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| |||||  | ||||||||||||||    
T  39586315 ttgcagggcgcgcgagaaggcaatagggtgggaaaagtaa 39586276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 149467 - 149030
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  149467 ttcagagtcattaacgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggctt 149368  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||    
T  149367 ccatcttcaacaaatacttacattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 149269  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  149268 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgt-gggttcatataacggtcaacagagacccttgacagcaaagaaagaca 149170  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||||||||||||||||||||||||||||  | ||| |||||||||| ||||||||||||  |||||| ||||| || ||||||||||||||    
T  149169 caaaaaattacataacatctggtccggatttctgtttctggaaaccactaacaatttggtccggattacataatccagaccatggttattttagtaaatt 149070  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    || |||| |||||||| |||||||| ||||| ||||||||    
T  149069 tttcaggacgcgcgagaaggcagcagggtggaaaaagtaa 149030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 41193717 - 41194153
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| |||||||    
T  41193717 agagctattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaatatgcttcca 41193816  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |               |||||||||| |||||||||| |||||    
T  41193817 tcttcaacaaataccttcattctccacttcacctcttttcttccattttctttaaatgcttttagtttttt--aggggtgtcggtggtgtcatgatcatt 41193914  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     
T  41193915 gttgatcgttcatgggaaccctgtaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacacat 41194014  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  |||||||||||||||| ||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  41194015 aaaaacacataacatctggtcctgatttcgttttccggaaatcactaacaatctggtccggattatgtaatccggaccagaaatattttagtaaattttg 41194114  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    | ||||||||||| |||||||| ||||||||||||||||    
T  41194115 ccgggcgcgcgagaaggcagcagggtgggaaaagtaaaa 41194153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 40937358 - 40936920
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  40937358 ttcagagtctttaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggatttgttttaggctataaataggctt 40937259  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||| |               ||||||||||||||||||||||||    
T  40937258 ccatcttcaacaaatactttcatttttcacttcacctcttttcttctattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 40937160  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||    
T  40937159 attgttgaccgttcatcggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgatagcaaagaaagaca 40937060  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||||||||||||||||||||||  |||||||||| || | ||||||||||||||||| |||||||  ||||| | ||||||| ||||||| ||||||    
T  40937059 cagaaaattacataacatctggtccatatttctgtttccggatatcactaacaatctggttcggattacataatctgaaccagggttattttaataaatt 40936960  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    || ||||| ||||||| |||||| | ||||||||||||||    
T  40936959 ttacagggtgcgcgagaaggcagtagggtgggaaaagtaa 40936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 32529937 - 32529508
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32529937 agagccattaatgtgggtttggacggttacaaccactaacacgttttcattaactgtattaatgacctaggacttgttttaggctataaataggcttcca 32529838  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |               |||||||| | ||||||||||||||||    
T  32529837 tcttcaacaaataccttcattcttcacttcacctcttttcttcccttttcttcaaatgtttttagtttttt--aggggtgttggtggtgtcatggtcatt 32529740  T
Q  252 gttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    |||||||||||||| |||||       | |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  32529739 gttgaccgttcatatgaacc-------tacaatagcattgcagcttgtgtggggttcatataacggtcaacaaagacccttgacatcaaagaaagacaca 32529647  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcac-taacaatctggtccggattatgtaatccggaccaggggtattttagtaaattt 449  Q
    |||||  | ||||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32529646 gaaaagcatataacatctggtccgaatttctgtttccggaaatcacttaacaatctggtccgaattatgtaatccggaccaggggtattttagtaaattt 32529547  T
Q  450 tgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    | |||||| |||||| |||||||| ||||| ||||||||    
T  32529546 tacagggcacgcgagaaggcagcagggtggaaaaagtaa 32529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 49 - 378
Target Start/End: Complemental strand, 47647060 - 47646728
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  47647060 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagg 47646961  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  47646960 cttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgatttttagtttttttaggggtgtcgatggtgtcatg 47646861  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47646860 gtcattgttgaccgttcataggaaccctgcagttgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaag 47646761  T
Q  346 acatagaaaattacataacatctggtccggatt 378  Q
    ||| ||||||| |||||||||||||||||||||    
T  47646760 acacagaaaatcacataacatctggtccggatt 47646728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 52 - 483
Target Start/End: Complemental strand, 39353435 - 39353013
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  39353435 agagtcattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggatttgttttaggctataaataggcttcca 39353336  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||| |               |||||||||| || |||||||||||||    
T  39353335 tcttcaacagatacattcattcttcacttcgcctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtgatgtcatggtcatt 39353238  T
Q  252 gttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    |||||||||||||| ||||||        |||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  39353237 gttgaccgttcatatgaaccca-------caatagcattgcagcttgtgt-gggttcatataacggtcaacagagaccattgacatcaaagaaagacaca 39353146  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  ||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||    
T  39353145 aaaaagaacataacatctggtccggatttaatttttcgaaaatcactaacaatcttgtccggattatataatccggaccaggggtatttttgaaaatttt 39353046  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaa 483  Q
     ||||||||||||  |||||||| |||||||||    
T  39353045 acagggcgcgcgataaggcagcagggtgggaaa 39353013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 49 - 440
Target Start/End: Original strand, 26502185 - 26502578
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||| ||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  26502185 ttcagagccattaatgtgggtttggacagttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagactataaatagg 26502284  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  26502285 cttccatcttcaacaaatacctacattcttcacttcacctcttttcttgcattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 26502383  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||||||| || |||||| |||||||||||||||||    
T  26502384 gtcattgttgaccgttcataggaaccctgcaattgcaatgtattgcagcttgtgcggggttcatataacggttaagagagacacttgacatcaaagaaag 26502483  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    |||  |||||||||||||||||| |||||||||||||||| || |||||| ||||||| || ||||||||||  |||| |||| | |||||||||    
T  26502484 acacggaaaattacataacatctagtccggatttctgtttccgaaaatcattaacaatttgatccggattatacaatctggacaaagggtatttt 26502578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 49166110 - 49166540
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| |||| |||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  49166110 agagtcattaatgtaggttaggacggttacaaccactaacatgttttcattgactgtagtaatgatctaggacttgttttaggctataaataggcttcca 49166209  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| | ||||||||||||||||||||||||| |||||||||||||||| |||||| |                 || ||| | ||||||||||||||||    
T  49166210 tcttca-caaataccttcattcttcacttcacatcttttcttccattttgttcaaatgtttttagtttttttt--ggatgtaggtggtgtcatggtcatt 49166306  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| ||||| || |||     ||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||| ||    
T  49166307 gttgaccgttcatatgaaccatgcaat-----tgcattgcagcttgtgtggggttcatataacggtcaatagagatctttgacatcaaagaaagacacag 49166401  T
Q  352 aaaattacataacatctggtccggatttctgttttc-gcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
    ||||  ||||||||||||||||||||||| ||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  49166402 aaaaacacataacatctggtccggatttc-gttttctaaaaatcactaacaatctggtccagattatgtaatccggaccatggatattttagtaaatttt 49166500  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||| |||||||||| ||||| ||| |||||||||||||||    
T  49166501 gcaaggcgcgcgagaaggcaacatagtgggaaaagtaaaa 49166540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 49 - 369
Target Start/End: Original strand, 47013712 - 47014032
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||    
T  47013712 ttcagagccattaatgtgggtttggatggttacaaccactaacacgttttcattgaccgtattaatgacctaggacttgttttaggctataaataggttt 47013811  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               ||||||||| ||||||||| ||||    
T  47013812 ccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgtttttttagttttttaggggtgtctatggtgtcacggtc 47013911  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
      |||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||     
T  47013912 gctgttgaccgttcataggaaccctgcaattcaaatgcattgcagcttgtgtggggttcatataacggtcaacaaagacccttgacatcaaagaaagacg 47014011  T
Q  349 tagaaaattacataacatctg 369  Q
     | ||||||||| ||||||||    
T  47014012 caaaaaattacacaacatctg 47014032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 57 - 488
Target Start/End: Original strand, 31765207 - 31765632
Alignment:
Q  57 cattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatcttt 156  Q
    |||| |||| |||||| ||||||||||||||||||||||||| ||| |||| | |||||| ||||||||||||||||| ||||||||||||||||||||     
T  31765207 cattaatgtaggtttgaacggttacaaccactaacacgtttttattgactgcactaatgacctaggacttgttttaggttataaataggcttccatcttc 31765306  T
Q  157 aacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttga 256  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||                 |||||||||  |||||||||||||||||||||    
T  31765307 aacaaataccttcattcttcacttcaccttctttcttccatcttcttcaaa--aaagattaattttttaggggtgtcagtggtgtcatggtcattgttga 31765404  T
Q  257 ccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaat 356  Q
    || |||||| |||||||| |||||||     ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  || | ||||     
T  31765405 ccattcatatgaaccctgcaattgca-----ttgcagcttgtgtggggttcatataatggtcaacagagacccttgacatcaaagaaaagcacaaaaaaa 31765499  T
Q  357 tacataaca-tctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagg 455  Q
     |||||||| | |||||||||||||  ||| |  |||||||||||||| ||||||| ||||| ||||||||||||||| |||||| | ||||||||||||    
T  31765500 cacataacaatatggtccggatttcattttccagaaatcactaacaatttggtccgaattatataatccggaccagggatatttttgaaaattttgcagg 31765599  T
Q  456 gcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||| |||||||| | ||| ||||||||    
T  31765600 gcgcgcgagaaggcagcaagatggaaaaagtaa 31765632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 49 - 354
Target Start/End: Original strand, 36402704 - 36403010
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaa---ccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| ||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  36402704 ttcagagtcattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggttataaatagg 36402803  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               | ||||||| |||||||||||    
T  36402804 cttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatg--tttttagttttttacgggtgtccatggtgtcatg 36402901  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||||||||| || ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36402902 gtcattgttgaccgttcataggaaccgtgcaattgcaatacattacagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaag 36403001  T
Q  346 acatagaaa 354  Q
    ||| |||||    
T  36403002 acacagaaa 36403010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 52 - 452
Target Start/End: Complemental strand, 6936605 - 6936214
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  6936605 agagccattaatatgggtttgggcggttacaaccactaacacgttttcattgactgtattaatgacttaggacttgttttaggctataaataggcttcca 6936506  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||| |               |||||||||  ||||||||||||||      
T  6936505 tcttcaacaaatacattcattcttcacttcaccttttttctttcattttcttcaaatg--ttttcagttttttaggggtgtcagtggtgtcatggtca-- 6936410  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
     ||||| ||||||| |||||||| |||     |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| |     
T  6936409 -ttgactgttcatatgaaccctgcaat-----tgcattgcagattgtgtgaggttcatataacggtcaacagagacccttgacatcaaagaaagacacaa 6936316  T
Q  352 aaaattacataacatctggtccggatttctgttttc--gcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattt 449  Q
    ||||| ||||||||||||||||| |||| |||||||  | ||   |||||||||| |||||||||||| |||||  ||||||||||||||| | ||||||    
T  6936315 aaaatcacataacatctggtccgaattt-tgttttctggaaacatactaacaatcgggtccggattatataatcaagaccaggggtatttttggaaattt 6936217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 237 - 446
Target Start/End: Complemental strand, 41174773 - 41174565
Alignment:
Q  237 ggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacat 336  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||    
T  41174773 ggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagcttatgtgaggttcatataacggtcaacagagacccttgacat 41174674  T
Q  337 caaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggta 436  Q
    |||||||||||| | ||||||||||||||||||||| ||||| || || | | ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  41174673 caaagaaagacacaaaaaattacataacatctggtctggattactattct-ggaaatcacaaacaatctgatccggattatgtaatccggaccaggggta 41174575  T
Q  437 ttttagtaaa 446  Q
    ||||||||||    
T  41174574 ttttagtaaa 41174565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 53814792 - 53814654
Alignment:
Q  350 agaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattt 449  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||    
T  53814792 agaaaattacataacatctggtccgcatttctgtttccggaaatcactaacaatctggtctgaattatgtaacccggaccagggttattttagtaaattt 53814693  T
Q  450 tgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| |||||||| |||||||| ||||||||||||||    
T  53814692 tgcaggacgcgcgagaaggcagcagggtgggaaaagtaa 53814654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 41174913 - 41174792
Alignment:
Q  86 actaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacct 185  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  41174913 actaacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacat 41174814  T
Q  186 cttttcttccattttcttcaaa 207  Q
    |||||||| |||||||||||||    
T  41174813 cttttcttacattttcttcaaa 41174792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 33843637 - 33843499
Alignment:
Q  69 tttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacctt 168  Q
    ||||||| ||||  ||||| ||||||||||  || |||||  | ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  33843637 tttggacagttagcaccacaaacacgttttatttgactgtggttatgatctaggacttgttttaggctataaataggtttccatcttcaacaaattcctt 33843538  T
Q  169 cattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||||| || |||||||||||||    
T  33843537 cattcttcacttcacctctttttttacattttcttcaaa 33843499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 21980080 - 21980325
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||||||| |||    
T  21980080 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttaaca 21980174  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||| ||||  |||||| |||||| | || |||||||||| |  ||||  ||| | ||||||||||||| ||||  | | ||||||||||| ||     
T  21980175 tcaaagaaaaacat--aaaatttcataacgtatgcgtccggattt-taatttccgaaaactctaacaatctggttcggaaaacgaaatccggaccatgga 21980271  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| ||| || |||||||||||||||||| ||| |||| ||||||||| ||||    
T  21980272 tattataggaatttttgcagggcgcgcgagaaggtagcagggtgggaaatgtaa 21980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 22002511 - 22002756
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||||||| |||    
T  22002511 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttaaca 22002605  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||| ||||  |||||| |||||| | || |||||||||| |  ||||  ||| | ||||||||||||| ||||  | | ||||||||||| ||     
T  22002606 tcaaagaaaaacat--aaaatttcataacgtatgcgtccggattt-taatttccgaaaactctaacaatctggttcggaaaacgaaatccggaccatgga 22002702  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| ||| || |||||||||||||||||| ||| |||| ||||||||| ||||    
T  22002703 tattataggaatttttgcagggcgcgcgagaaggtagcagggtgggaaatgtaa 22002756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 36403016 - 36403114
Alignment:
Q  390 aaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||| || |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  36403016 aaatcactaacaatttgatccggattatataatccgaatcaggggtattttagtaaattttgcagggcgcgcgaggaggcagcagggtgagaaaagtaa 36403114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 25214595 - 25214690
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaac 208  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||| |||||||| | ||||||| ||||    
T  25214595 atgatctaggacttgttttaggctataaatagacttacatctttaacaaattccttcattcttcaattcaccacttttcttactttttcttaaaac 25214690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 488
Target Start/End: Complemental strand, 47646741 - 47646655
Alignment:
Q  402 atctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| || || |||| |||||||||||||||||||||||    
T  47646741 atctggtccggattatgtaatccggaataggggtattttagtaaattttgcacggtgcacgagaaggcagcatggtgggaaaagtaa 47646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 51328989 - 51329079
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||| ||||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||| || |||||||||    
T  51328989 atgaactaggacttgttttaggctataaataggcttgcatgttcaacaaattccttcattcttcacttcacctcttttattacattttctt 51329079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 122 - 348
Target Start/End: Complemental strand, 53394013 - 53393794
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnn 221  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||| | |||||||||| |||||||||||||                  
T  53394013 gacttgttttaggctataaataggcttgcatgttcaacaaattccttcattcttcactttatctcttttctttcattttcttcaaa--aaatttaagttt 53393916  T
Q  222 nnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaac 321  Q
       ||| ||||   |||||||||||||||||||||||||||||| || || || |||     ||||||||||||| ||  ||  | |||||||||||||     
T  53393915 tgtaggagtgtttgtggtgtcatggtcattgttgaccgttcatacgacccatgcaat-----tgcattgcagcttatgcgggaattatataacggtcaag 53393821  T
Q  322 agagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||||    
T  53393820 agagacccttgacatcaaagaaagaca 53393794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 9126984 - 9126738
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||| |||||||||||||||| |||||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  9126984 tggtttcatggtcattgttgatcgttcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 9126890  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | | | ||| || | | |||   || ||||||||||||||| |||| || ||||||||||||| |||    
T  9126889 tcaaagaaagacacaaaatatt-catatcgtatttgactgga-ttatatattccggaaacactaacaatctggttcggaatacgtaatccggaccaaggg 9126792  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| | || |||||||||||||||||| ||||| ||||||  |||||||||    
T  9126791 tatttttggaatttttgcagggcgcgcgagtaggcaacatggttagaaaagtaa 9126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 9135091 - 9134845
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||| |||||||||||||||| |||||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  9135091 tggtttcatggtcattgttgatcgttcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 9134997  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | | | ||| || | | |||   || ||||||||||||||| |||| || ||||||||||||| |||    
T  9134996 tcaaagaaagacacaaaatatt-catatcgtatttgactgga-ttatatattccggaaacactaacaatctggttcggaatacgtaatccggaccaaggg 9134899  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| | || |||||||||||||||||| ||||| ||||||  |||||||||    
T  9134898 tatttttggaatttttgcagggcgcgcgagtaggcaacatggttagaaaagtaa 9134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 42899294 - 42899201
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||| || ||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  42899294 atgatatatgacttgttttaggctataaataggcttgcattttcaacaaattccttcattcttcacttcaccttttttcttacattttcttcaa 42899201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 49440449 - 49440695
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||| ||||||||| ||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||| |||||||||||||||||||    
T  49440449 tggtgtcatgctcattgttggccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacgatcaacagagacccttgaca 49440543  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | | |  |||||||||     || || | | ||||||||||||||||||||||| |||||||||||||| ||    
T  49440544 tcaaagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggata-cactaacaatctggtccggattacgtaatccggaccagagg 49440641  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||||||||||||| ||||| || ||||| ||||||||    
T  49440642 tatttatgaaatttttgcagggcgcgcgagaaggcaacagggtggaaaaagtaa 49440695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 49327495 - 49327602
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  49327495 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 49327589  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  49327590 tcaaagaaagaca 49327602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 21450342 - 21450588
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||  || ||||| |||     ||||||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  21450342 tggtgtcatggtcattgttgaccgctcatgtgacccctgcaat-----tgcattgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 21450436  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | ||||||| || | | |||   || |||||||||||||||  |||||| ||||||||||||||       
T  21450437 tcaaagaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattctggaaacactaacaatctggtatggattacgtaatccggaccagata 21450534  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || ||||||| |||||||||| ||||| || ||||| ||||||||    
T  21450535 tatttatggaatttttgcaaggcgcgcgagaaggcaacagggtggaaaaagtaa 21450588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 238 - 348
Target Start/End: Original strand, 26982508 - 26982613
Alignment:
Q  238 gtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatc 337  Q
    |||||||||||||||||||||||||||| || ||||| |||||||     | ||||||| ||  ||| | ||||||| ||||||||||||||||||||||    
T  26982508 gtgtcatggtcattgttgaccgttcatacgacccctgcaattgca-----tagcagcttatgcgggggttatataacagtcaacagagacccttgacatc 26982602  T
Q  338 aaagaaagaca 348  Q
    |||||||||||    
T  26982603 aaagaaagaca 26982613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 44207773 - 44207877
Alignment:
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    |||||| |||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||||||||||||||    
T  44207773 tgtcatagtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgacatca 44207867  T
Q  339 aagaaagaca 348  Q
    ||||||||||    
T  44207868 aagaaagaca 44207877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 8486688 - 8486795
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| |  ||||||||||||| |||||||||||||    
T  8486688 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggttgtataacggtcaacggagacccttgaca 8486782  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  8486783 tcaaagaaagaca 8486795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 3733707 - 3733814
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgt-agggttcatataacggtcaacagagacccttga 333  Q
    ||||||||||||||||||| ||||||||||  ||||||     |||||| |||||||||||  ||| |||||| ||||||||||||||||||||||||||    
T  3733707 tggtgtcatggtcattgttaaccgttcatat-aaccct-----tgcaattgcattgcagctaatgtgagggtt-atataacggtcaacagagacccttga 3733799  T
Q  334 catcaaagaaagaca 348  Q
    |||||||||||||||    
T  3733800 catcaaagaaagaca 3733814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 47375059 - 47375153
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| |||||||||||||||||| ||||| ||||||||| ||||||  | || ||||| |||||||||||| ||||| || ||||||||||||||    
T  47375059 cacttacaatctggtccggattacgtaattcggaccaggtgtatttatgaaatttttgaagggcgcgcgagaaggcatcagggtgggaaaagtaa 47375153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 2183034 - 2182927
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||||||||| || ||||| |||     |||||||||||||  |  ||  || ||||||||  |||||||||||||||||    
T  2183034 tggtgtcatggtcattgttgaccgttcatacgacccctgcaat-----tgcattgcagcttaagcgggagtcgtataacggataacagagacccttgaca 2182940  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  2182939 tcaaagaaagaca 2182927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 9117096 - 9116993
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||| ||||||||||||||| ||||| || | ||| |||     ||||||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  9117096 tggtgtcacggtcattgttgaccgctcatacgaccactgcaat-----tgcattgcagcttatgcgggggtcctataacggtcaacagagacccttgaca 9117002  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  9117001 tcaaagaaa 9116993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 18875984 - 18875739
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||| ||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||||||| |||    
T  18875984 tggtgtaatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttaaca 18875890  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    |||||| || ||  | |||||| ||||   | || ||||||||||   ||| ||  || | ||||||||||||| || |  ||| ||||| ||||| ||     
T  18875889 tcaaagcaaaac--acaaaatttcatagtgtatgcgtccggattttaatttccggtaa-ctctaacaatctggttcgaaaaatgaaatccagaccaagga 18875793  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     ||| ||| |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  18875792 aattataggaaattttggagggcgtgcgagaaggcagcagggtgggaaaagtaa 18875739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 44207920 - 44208014
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||  |||||  ||||||| ||||| |||||||  | || |||||||||||||||||| ||||| || ||||||||||||||    
T  44207920 cactaacaatctggtcaagattacataatccgaaccagaggtatttatggaatttttgcagggcgcgcgagaaggcaacagggtgggaaaagtaa 44208014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 9116946 - 9116863
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggt 477  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| | || ||||  | |||||||||| ||||| ||||||    
T  9116946 cactaacaatctggttcggaatacgtaatccggaccaggggtatttttggaatttttatacggcgcgcgagtaggcaacatggt 9116863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 10494800 - 10494871
Alignment:
Q  135 ctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||||||| ||||  ||||| ||||| | ||||||||||||||||||||| ||||||| ||||||||||||    
T  10494800 ctataaatatgcttagatcttcaacaatttccttcattcttcacttcaccttttttcttacattttcttcaa 10494871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 48062130 - 48062025
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || | ||| ||||| |     ||||||||  ||  ||| ||||||||||||||| ||||||| ||||||    
T  48062130 tggtgtcatggtcattgttgaccgctcatacgacctctgcaattgta-----ttgcagctcatgcgggggtcatataacggtcaatagagaccattgaca 48062036  T
Q  336 tcaaagaaaga 346  Q
    |||||||||||    
T  48062035 tcaaagaaaga 48062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 16481300 - 16481236
Alignment:
Q  284 tgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||| ||| || |||| || |||||||||||||| ||| |||||||||||||||||||||    
T  16481300 tgcattgcaccttatgcaggggtcgtataacggtcaacatagatccttgacatcaaagaaagaca 16481236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 536 - 579
Target Start/End: Complemental strand, 227286 - 227243
Alignment:
Q  536 gagataaaatgattccttttaacagtattatctttaggtaaatt 579  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  227286 gagataaaatgattccttttaacaatattagctttaggtaaatt 227243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 12717690 - 12717635
Alignment:
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||| ||||| | ||||||||||||||||||||||||||||| ||||| ||||||    
T  12717690 atcttcaacaatttccttcattcttcacttcacctcttttcttacatttacttcaa 12717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 27023961 - 27023918
Alignment:
Q  150 catctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  27023961 catcttcaacaaattccttcattcttcacttcacctcttttctt 27023918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 16481191 - 16481121
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||  | || |||| || ||||||||||    
T  16481191 cactaacaatctggtccagattacgtaatctggaccaggggtatttatggaatttttacaaggcgcgcgag 16481121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 26982429 - 26982479
Alignment:
Q  157 aacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||||||| |||||||||||||||||| || ||||||| |||||||||||||    
T  26982429 aacaaattccttcattcttcacttcatctattttctttcattttcttcaaa 26982479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 45405668 - 45405785
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    ||||||||||  || |||||| | |||| ||| ||||  ||| |||||||||| ||| ||  ||||| ||||| | | |||||||||||||||||||| |    
T  45405668 aacacgttttatttgactgtacttatgacctatgactgatttaaggctataaaaaggtttggatcttcaacaatttctttcattcttcacttcacctcct 45405767  T
Q  189 ttcttccattttcttcaa 206  Q
    ||||| |||||| |||||    
T  45405768 ttcttacattttgttcaa 45405785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 33843468 - 33843365
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||||||| ||||||||  | ||||| ||||||      ||||||||| || | |  | ||||||| ||||||||||||| ||||||    
T  33843468 tggtgtcatggtcattgttgatcgttcatataacccctgcaattgct-----ttgcagcttatgcaagagttatataacagtcaacagagacctttgaca 33843374  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  33843373 tcaaagaaa 33843365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 33186606 - 33186516
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattt-tagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||| |||||||||| ||||||| ||||||| || ||||| ||||| ||| || |||||||||||||||||| ||||| || ||||| ||||    
T  33186606 cactgacaatctggttcggattacgtaatccagatcagggatatttatag-aatttttgcagggcgcgcgagaaggcaacagggtggaaaaa 33186516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 348
Target Start/End: Original strand, 47374975 - 47375014
Alignment:
Q  309 tataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  47374975 tataacggtcaacagagacccttaacgtcaaagaaagaca 47375014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 49327373 - 49327457
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  49327373 gacttgttttaggctataaaaaggcttgaatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 49327457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 9127108 - 9127025
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaa 206  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| ||||||||||||    
T  9127108 gacttgttttaggctataaacaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaa 9127025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 9135215 - 9135132
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaa 206  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| ||||||||||||    
T  9135215 gacttgttttaggctataaacaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaa 9135132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 42899173 - 42899127
Alignment:
Q  235 atggtgtcatggtcattgttgaccgttcataggaaccctgaaattgc 281  Q
    |||||||||||||||||||||||||| ||||  | ||||||||||||    
T  42899173 atggtgtcatggtcattgttgaccgtacatataatccctgaaattgc 42899127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 10494899 - 10494928
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  10494899 tggtgtcatggtcattgttgaccgttcata 10494928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 12717607 - 12717578
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  12717607 tggtgtcatggtcattgttgaccgttcata 12717578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 33186684 - 33186651
Alignment:
Q  315 ggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||||| ||||||||||||||    
T  33186684 ggtcaacagagacccttgatatcaaagaaagaca 33186651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 44207641 - 44207731
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    ||||| |||||||||||||||||||| | ||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  44207641 atctatgacttgttttaggctataaaaaagcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 44207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 149781 - 149737
Alignment:
Q  6 aggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    ||||| |||| |||||||| |||| ||||||||||||||||||||    
T  149781 aggaggagagggtgggagaggatgatggggtttggaaggctattt 149737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 45405824 - 45405919
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||  ||||||||||||||||||| || | ||| |||     ||||||||||||| ||| ||| |  |||||||||||||| ||| ||||||||    
T  45405824 tggtgtcataatcattgttgaccgttcatacgaccactgcaat-----tgcattgcagcttatgtgggggttgtataacggtcaacaaagatccttgaca 45405918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 51329151 - 51329207
Alignment:
Q  288 ttgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||| ||| ||| | ||||||||||||| | ||||| |||||||||||||||    
T  51329151 ttgcagcttatgtgggggttatataacggtcaaaacagacctttgacatcaaagaaa 51329207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 35158860 - 35158421
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35158860 ttcagagccattattgtgggtttggacggttagaaccactaacacgttttcatttactgtattaatgacctaggacttgttttaggctataaataggctt 35158761  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               ||||| ||||||||||||||||||    
T  35158760 ccatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggcgtcgatggtgtcatggtc 35158662  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35158661 attgttgaccgttcataagaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacggagacccttgacatcaaagaaagaca 35158562  T
Q  349 tagaaaattacataacatctggtccgga-tttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaat 447  Q
     ||||||||||||||||||||||||| | ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35158561 cagaaaattacataacatctggtccgaattttctgtttccggaaataactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaat 35158462  T
Q  448 tttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  35158461 tttgcagggcgcgcgaggaggcagcagggtgggaaaagtaa 35158421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 52416927 - 52417367
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  52416927 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaagacttgttttaggctataaatagg 52417026  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  52417027 cttccatcttcaacaaataccctcattcttcacttcacctcttttcttacattttcttcaaatgttttctagtttttt-aggggtgtcgatggtgtcatg 52417125  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
     | || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52417126 attatcgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaag 52417225  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52417226 acataaaaaattacataacatatggtccggatttctgtttccggaaa-cactaacaatctggtccggattacgtaatccggaccaggggtattttagtaa 52417324  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||| |||||| |||||||| ||| ||||||||||    
T  52417325 attttgcagggcacgcgagaaggcagcagggtaggaaaagtaa 52417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 49 - 487
Target Start/End: Complemental strand, 40728167 - 40727729
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||| ||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  40728167 ttcatagccattaatgtgggtatggatggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctt 40728068  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
     |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||                 ||||||||||||||||||||||||    
T  40728067 tcatcttcaacaaataccttcattcttcacatcacctcttttcttacattttcttcaaataaaaatttagttttttaggggtgtcgatggtgtcatggtc 40727968  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||    
T  40727967 attgttgaccgttcataagaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggttaacagagatcattgacatcaaagaaagaca 40727868  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||||| ||||||||||||||| |||||||||||| || ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  40727867 cagaaaataacataacatctggtctggatttctgtttccgaaaatcactaacaatctggtccagattgtataatccggaccaggggtattttagtaaatt 40727768  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagta 487  Q
    ||||||||   |||||||||||||| |||| ||||||||    
T  40727767 ttgcagggtatgcgaggaggcagcagggtgagaaaagta 40727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 49 - 479
Target Start/End: Complemental strand, 31093247 - 31092818
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  31093247 ttcagagccattattgtgggtttggacggttacaaccactaacacgatctcattgactgtattaatgacctatgacttgttttaggctataaataggctt 31093148  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||| |||||||||||||||    
T  31093147 ccatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgttgatggtgtcatggtc 31093049  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  31093048 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagatccttgacatcaaagaaagaca 31092949  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
      || |||||||||||||||||||| ||||||||||| |  |||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  31092948 cggagaattacataacatctggtccagatttctgtttccagaaataactaacaatttggtccggaatatgtaatccggagcaggggtattttagtaaatt 31092849  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgg 479  Q
    ||  || ||||||||| ||||||||||||||    
T  31092848 ttatagagcgcgcgagaaggcagcatggtgg 31092818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 49 - 484
Target Start/End: Complemental strand, 51538786 - 51538352
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||| |||||| |||||||||||||| ||| ||||||| |||| ||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||    
T  51538786 ttcagggccattaatgtgggtttggacagttgcaaccaccaacatgttttcattgactgtattaatgacttaggacttgttttaggctataaatatgctt 51538687  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||                 |||| |||||||||||||||||||    
T  51538686 ccatcttcaacaaataccttcattcttcacttcacctcttttcttccatttttttcaaatattttttagttttttaaggg-tgtcgatggtgtcatggtc 51538588  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51538587 attgttgaccattcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagaca 51538488  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||| |||| | |||||||    
T  51538487 cagaaaattacataacatctggtccggatttctgtttccggaaatcactaacaatctagtccgaattatgtaatccggaccagggttattgtcgtaaatt 51538388  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||||||  ||||| |||||||| ||||||||||    
T  51538387 ttgcagggcatgcgagaaggcagcagggtgggaaaa 51538352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 28780772 - 28781205
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||    
T  28780772 ttcagagccattaatgtggttttgggcggttacaaccactaacacgttttcattgactgtattaatgacatatgacttgttttaggctataaataggctt 28780871  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |               ||||||||||||||||||||||||    
T  28780872 ccatcttcaacaaataccttcattcttcacatcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 28780970  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||| |||||||||| ||| |||     | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  28780971 attgttgaccgttcagaggaaccctgcaatagca-----tagcagcttgtgtgtggttcatataacggtcaacagagacccttgacatcaaagaaagaca 28781065  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28781066 cagaaaattacataacatctggtccggatttctgtttccagaaatcactaacaatctggtccggattgcgtaatccggaccaggggtattttagtaaatt 28781165  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||| || |||||||||||||||||| |||||||||    
T  28781166 ttgcagggtgcacgaggaggcagcatggtgagaaaagtaa 28781205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 49 - 470
Target Start/End: Complemental strand, 30003754 - 30003332
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttt--taggctataaataggc 146  Q
    ||||||| ||||  ||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  30003754 ttcagagtcattattgtgggtttggacggttacaagcaataacacgttttcattgactgtattaatgacctaggacttgtttattaggctataaataggc 30003655  T
Q  147 ttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatgg 246  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||    
T  30003654 ttccatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatgg 30003556  T
Q  247 tcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaaga 346  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  30003555 tcattgttgaccgttcataagaacactacaattgcaatgcattgcagcttgtgtggggttcatataacaatcaacagagacccttgacatcaaagaaaga 30003456  T
Q  347 catagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaa 446  Q
    || |||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||||||||| ||||||||||||| | ||||||| ||||    
T  30003455 cacagaaaattacataacatctggtccggatttctgtttccagaaataactaacaatctggtccggattatataatccggaccagagatattttaataaa 30003356  T
Q  447 ttttgcagggcgcgcgaggaggca 470  Q
    || ||| |||||||||||||||||    
T  30003355 ttatgccgggcgcgcgaggaggca 30003332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 1602924 - 1602492
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  1602924 ttcagagtcattaatgtggatttggacggttacaaccactaacacgtttt-attgactgtattaatgacctaggacttgttttaggctataaataggctt 1602826  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||||| |||||||||||    
T  1602825 tcatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatagtgtcatggtc 1602727  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||| ||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1602726 attgctgaccgttcataggaaccctgcagttgcaatgcattg--gcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaataca 1602629  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||| |||||||||||||| |||| |||||||||| |  ||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  1602628 cagaaagttacataacatctgatccgaatttctgtttccagaaatcactaacaatctggtccggatt---taatccggaccagggatattttagtaaatt 1602532  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| |||||| |||||||||||||| | ||| ||||||||    
T  1602531 ttgtagggcgtgcgaggaggcagcaggttggaaaaagtaa 1602492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 49 - 464
Target Start/End: Complemental strand, 16024014 - 16023600
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||    
T  16024014 ttcagagtcattaatgtgggtttggacggttgcaaccactaacacgttttcattgactgtattaataacctatgacttgttttaggctataaataggctt 16023915  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               ||||||||||||||||||||||||    
T  16023914 ccatattcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagtgtttt-aggggtgtcgatggtgtcatggtc 16023816  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  16023815 attgttgaccgttcataggaaccttgcaattgcaatgcattgtagcttgtgtggggttcatataacaatcaacagagacccttgacatcaaagaaagaca 16023716  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||| ||||||||||||| | ||||  || |||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||    
T  16023715 cagaaaattacataagatctggtccggatatttgttaccggaaatcactaacaatattgtccgaattatgtaatccgaaccaggggtattttagtaaatt 16023616  T
Q  449 ttgcagggcgcgcgag 464  Q
    |||||||| |||||||    
T  16023615 ttgcagggtgcgcgag 16023600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 9036094 - 9036533
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| |||||||||||||||||||||||   |||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||    
T  9036094 ttcagagtcattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacttaggactt-ttttaggctataaatagg 9036192  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    ||| |||||| ||||||||| ||||||||||| ||||||||||||||| |||||| |||||| |               ||||||||| |||||||||||    
T  9036193 ctttcatcttcaacaaatacattcattcttcatttcacctcttttcttacattttattcaaatgttttttagtttttt-aggggtgtcaatggtgtcatg 9036291  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  9036292 gtcattgttgaccgttcataggaatcctaaaattgcaacgcattgcagcttgtgtggggttcatataacggtcaacagaggcccttaacatcaaagaaag 9036391  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| |||||||||||||||||||||||| |||||||| || || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9036392 acacagaaaattacataacatctggtccagatttctg-ttccggaaatcacgaacaatctgatccggattatgtaatccggaccaggggtattttagtaa 9036490  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||||||||   ||||| ||||||||    
T  9036491 attttgcagggcgcgcgaggaggcagtcgggtggaaaaagtaa 9036533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 38551270 - 38551699
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  38551270 agagccattaatgtaggtttggacggttacaaccactaacacgttttcattgactgtactaatgacctaggacttgttttaggctataaataggcttcca 38551369  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  38551370 tcttcaacaaataccttcattcttcacttcacatcttttcttccattttcttcaaatgtttagtttttt----aggggtgtcggtggtgtcatggtcatt 38551465  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
     | ||||||||||| |||||||| |||   ||  ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||| |     
T  38551466 ctcgaccgttcatatgaaccctgcaat---aa--cattgcagcttgtgtggggttcatataacggtccacaaagacccttgacatcaaggaaagacacaa 38551560  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||||||||||| |||||  ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  38551561 aaaagcacataacatctggtccgtatttcgttttccgaaaatcactaacaatctggtccggattatataatccggaccaggggtatttttggaaattttg 38551660  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  38551661 cagggcgcgcgagaaggcagcagggtgggaaaagtaaaa 38551699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 49 - 456
Target Start/End: Original strand, 43841871 - 43842280
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||| ||||||| |||||||||||||||||||||||   |||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||     
T  43841871 ttcatagccattaatgtgggtttggacggttacaacaaccactaagacgttttaattgactgtattaatgacctatgacttgttttaggctataaataga 43841970  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    ||| |||||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||||||| |               || | ||||||||||||||||    
T  43841971 ctttcatcttcaacaaatacattcattcttcaattcacctattttcttacattttcttcaaatgttttttagtttttt-agagatgtcgatggtgtcatg 43842069  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43842070 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaag 43842169  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||    
T  43842170 acacagaaaattacataacatctgggccggatttctgtttccgaaaatcactaacaatctgatccggattatgtaatctagaccaagggtattttagtaa 43842269  T
Q  446 attttgcaggg 456  Q
    |||||||||||    
T  43842270 attttgcaggg 43842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 56 - 488
Target Start/End: Complemental strand, 55136802 - 55136369
Alignment:
Q  56 ccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccat 152  Q
    ||||| |||||||||||||||||||||||   |||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||||||||||||| |||    
T  55136802 ccattaatgtgggtttggacggttacaacaaccactaacacgttatcattgattgtattaatgacctatgacttgttttaggctataaataggctttcat 55136703  T
Q  153 ctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattg 252  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |               |||||||||||||||||||||||||||     
T  55136702 cttcaacaaataccttcattcttcacttcacctcttttcttacattttcgtcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtcatta 55136604  T
Q  253 ttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacataga 352  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||| |||||||||||||||||| |||||| |      
T  55136603 ttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggct-atataacagtcaacaaagacccttgacatcaaaggaagacacatc 55136505  T
Q  353 aaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgc 452  Q
    |||||||||||||| | |||||||||||||||| || ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  55136504 aaattacataacattttgtccggatttctgtttccgaaaatcactaacaatctgatccggattatgtaatccgaatcaggggtattttagtaaattttgc 55136405  T
Q  453 agggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| |||  ||||||||||| ||||| ||||||||    
T  55136404 agggtgcgaaaggaggcagcagggtggaaaaagtaa 55136369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 49 - 416
Target Start/End: Complemental strand, 33281227 - 33280862
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||    
T  33281227 ttcagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgattgtattaatgacctaagacttgttttaggctataaataggctt 33281128  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               | ||||||||||||||||||||||    
T  33281127 acatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatg--tttttagttttttaagggtgtcgatggtgtcatggtc 33281030  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||| ||||||||||||||||||  |||||||||||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||     
T  33281029 attgttaaccgttcataggaacccttcaattgcaatgcattgcggcttgtgtggggttaatataacggtcaacagagacactcgacatcaaagaaagacg 33280930  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggatta 416  Q
     ||||||  ||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  33280929 cagaaaaacacataacatttggtccagatttctgttttcggaaatcactaacaatctggtccggatta 33280862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 4189874 - 4190303
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  4189874 agagtcattaatgtgggtttggacggttacaaccactaacacgtttttattgactatattaatgacctaggacttgttttaggctataaataggcttcca 4189973  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  4189974 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 4190071  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| |     
T  4190072 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtgaggttcatataacggtcaacagagacccatgacatcaaagaaagacacaa 4190166  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||| ||||||| ||||   ||| || ||||| |||||||||||||| ||||||| ||||||| |||||||||||||| | ||||||||    
T  4190167 aaaagcacataacatttggtccgaatttaattttccggaaatcgctaacaatctggtcaggattatataatccgaaccaggggtatttttggaaattttg 4190266  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     ||||||||| || || || || ||||||||||||||    
T  4190267 aagggcgcgcaagaagacaacagggtgggaaaagtaa 4190303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 38218262 - 38218702
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| | ||||||||||||||| |||||||   |||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  38218262 agagccactaatgtgggtttggacgattacaacaaccactaacacgttttcattgactgtattaatgacctagaacttgttttagcctataaataggctt 38218361  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnn-aggggtgtcgatggtgtcatggt 247  Q
    ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||| |                |||||||||||||||||||||||    
T  38218362 ccatcttcaacaaatacctacattcttcacttcacctctttttttacattttcttcaaatgttttttttagttttttaggggtgtcgatggtgtcatggt 38218461  T
Q  248 cattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagac 347  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  38218462 cattgttgaccgttcataggaaccctacaattgcaatgcattgcagcttgtgtgtggttcatataacggtcaacagagacccttgacatcaaagaaagac 38218561  T
Q  348 atagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaat 447  Q
    | | ||||||||||||||||||||||||||||||||||  | ||||||||||||||||| | | ||||||  |||||| || | ||||||||| || ||     
T  38218562 acaaaaaattacataacatctggtccggatttctgtttctggaaatcactaacaatctgattcagattatacaatccgaacaaagggtattttggtcaaa 38218661  T
Q  448 tttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     |   |||||||||||| |||| | | ||||||||||||||    
T  38218662 atcatagggcgcgcgagaaggctgtagggtgggaaaagtaa 38218702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 45229211 - 45228793
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||    
T  45229211 ttcagagccattaatgtgggtttggacggttacaaccactaacacgttttcatggactgtattaatgacctaggacttgttttaggctataaataggatt 45229112  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||  |||||||||||| |||||||||||||| |||||||||||||                 ||||||||||||||||||||||||    
T  45229111 ccatcttcaacaaatatattcattcttcacatcacctcttttcttacattttcttcaaatatttttttagttttttaggggtgtcgatggtgtcatggtc 45229012  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |                    ||||||||||||||||||||||||||    
T  45229011 attgttgaccgtttataggaaccctgcaattgcaat-cattgcagcttgtgtgg--------------------gagacccttgacatcaaagaaagaca 45228933  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||  || || |||||||||||||||||    
T  45228932 cagaaaattacataacatctggtccggatttttgtttccgaaaatcactaacaatctggtccggattatgtaatcatgatcaagggtattttagtaaatt 45228833  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| || ||||| ||||| ||||||||    
T  45228832 ttgcagggcgcgcgagaagacagcagggtggaaaaagtaa 45228793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 49374458 - 49374027
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||    
T  49374458 ttcagagccattaatgtgggtttggacagttacaaccactaacacgttttcattgactgtat-aatgacctatgacttgttttaggctataaataggctt 49374360  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |               |||||||||| |||||||||||||    
T  49374359 ccatcttcaacaaaaacctccattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtc 49374262  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| |||      |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  49374261 attgttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagactcttgacatcaaagaaagaca 49374167  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||   |||||||| ||||||||||||   ||||||   |||| ||||||||| ||||||||| | ||||| |||||||||||||||| | |||||    
T  49374166 caaaaaagcgcataacatatggtccggattttgtttttcggggatcattaacaatctcgtccggattgtataatctggaccaggggtatttttgaaaatt 49374067  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| ||| |||| ||||||||||||||    
T  49374066 ttgcagggcgcgcgagaaggtagcagggtgggaaaagtaa 49374027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 68 - 488
Target Start/End: Complemental strand, 16452052 - 16451639
Alignment:
Q  68 gtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacct 167  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||    
T  16452052 gtttgaacggttacaaccactaacacgttttcattgactgtagtaatgatctaggacttgttttaggctataaataggcttccatcttcagcagatacct 16451953  T
Q  168 tcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcatagg 267  Q
    ||||||||||||||||||||||||||| |||||||||||| |               |||||||||| |||| ||||||||||||||||||||||||| |    
T  16451952 tcattcttcacttcacctcttttcttcaattttcttcaaatgttcttagtttttt--aggggtgtcggtggtatcatggtcattgttgaccgttcatatg 16451855  T
Q  268 aaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatc 367  Q
    ||||||  ||| |||     ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||    
T  16451854 aaccctacaatagca-----ttgcagcttctgtgaggttcatataacggtcaacagagacccttgacatcaaagaaagacacaaaaaagcacataacatc 16451760  T
Q  368 tggtccggatttctgttttc-gcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgagga 466  Q
    ||||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||| ||||| ||||||||| | ||||||||||| ||||||||| |    
T  16451759 tggtctggattt-tgttttccgaaaatcactaacaatctggtccggattatataatccagaccaagggtatttttgaaaattttgcagagcgcgcgagaa 16451661  T
Q  467 ggcagcatggtgggaaaagtaa 488  Q
    ||||||| ||||||||||||||    
T  16451660 ggcagcagggtgggaaaagtaa 16451639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 45924736 - 45924307
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| |    
T  45924736 agagccattaatgtgggtttggacggttgcaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggtttcaa 45924637  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  45924636 tcttcaacaaataccttcattcctcacttaacctcttttcttccattttcttcaaatg--tttttagttatttaggggtgtcggtggtgtcatggtcatt 45924539  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  45924538 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagaccattgacatcaaagaaagacaca- 45924445  T
Q  352 aaaattacataacatctggtccggattt-ctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
    ||||  ||||||||||||||||| ||||  ||||   | |||||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||    
T  45924444 aaaagcacataacatctggtccgaatttaatgttccggaaaatcactaacaatttggtccggattatataatccggaccaggggtatttttaaaaatttt 45924345  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| |||||||||| ||||||||  |||| ||||||||    
T  45924344 gcatggcgcgcgagaaggcagcagagtggaaaaagtaa 45924307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 225 - 488
Target Start/End: Original strand, 45029192 - 45029455
Alignment:
Q  225 aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacaga 324  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45029192 aggggtgtcgatggtgtcatggtagttgttgaccgtttataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacaga 45029291  T
Q  325 gacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatcc 424  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  45029292 gacccttgacatcaaagaaagacacagaaaattacataacatctggtccgaatttctgttttcggaaatcactaacaatctgatccgaattatgtaatcc 45029391  T
Q  425 ggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| ||||||||||||||||||||||||||| ||| ||| |||||||| ||||| ||||||||    
T  45029392 ggactaggggtattttagtaaattttgcagggtgcgggagaaggcagcagggtggaaaaagtaa 45029455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 53 - 440
Target Start/End: Original strand, 56463647 - 56464028
Alignment:
Q  53 gagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttc 149  Q
    |||||||| |||||||||||||||||||||||   ||||||||| |||||||| ||||||||||||| |  |||||||||||||||||||||||||||||    
T  56463647 gagccattaatgtgggtttggacggttacaacaaccactaacacattttcattgactgtattaatgaccgtggacttgttttaggctataaataggcttc 56463746  T
Q  150 catctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtca 249  Q
    |||||| ||||||||||||||       |||||||| ||||||| ||||||||||||| |               ||||| ||||||||||||||| |||    
T  56463747 catcttcaacaaataccttca-------cttcacctattttcttacattttcttcaaatgttttttagtttttt-agggg-gtcgatggtgtcatgctca 56463837  T
Q  250 ttgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacat 349  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  56463838 ttgttgaccgttcataggaaccatgcaattgcaatgcattgcagtttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacac 56463937  T
Q  350 agaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | ||||||||  ||||||||| | |||||||||    
T  56463938 agaaaattacataacatctggtccggatttctgtttccgaaaatcactaacaatctgattcggattatacaatccggacaaagggtatttt 56464028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 15542841 - 15543270
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||    
T  15542841 agagcaattaatgtgggtttggacggttaaaac-actaacacgttttcattgactatagtaatgacctaggacttgttttaggctataaataggcttcca 15542939  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               | |||||||| | ||||||||||||||    
T  15542940 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aagggtgtcggttgtgtcatggtcatt 15543037  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||  |||     ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |     
T  15543038 gttgaccgttcatatgaaccctagaat-----tgcattgcagcttgtgtggggttcgtataacggtcaatagagacccttgacatcaaagaaagacaaaa 15543132  T
Q  352 aaaattacataacatc-tggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
    ||||  |||||||||| || |||| ||||   ||| || |||||||||||||||| ||| ||||||| ||||| |||||| ||||||||| | |||||||    
T  15543133 aaaagcacataacatcttgttccgaatttaattttccgaaaatcactaacaatctagtctggattatataatctggaccatgggtatttttggaaatttt 15543232  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    | |||||||||||| |||||||| ||||||||||||||    
T  15543233 gtagggcgcgcgagaaggcagcaaggtgggaaaagtaa 15543270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 28310890 - 28311320
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggactt-gttttaggctataaataggcttcc 150  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||| ||||| ||||||  ||||||||||||||||    
T  28310890 agagtcattaatgtgggtttgaacggttacaaccactaacacgttttcattgaccgtattaatgacctaagactttgttttatactataaataggcttcc 28310989  T
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcat 250  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||| |               |||||||||| |||||||||||||||    
T  28310990 atcttcaacaaataccttcattcttcatttcacctcttttattccattttcttgaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcat 28311087  T
Q  251 tgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    ||||||||||||||  || ||||| |||   ||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  28311088 tgttgaccgttcatgtgagccctgcaat---aa--cattgcagcttgtgtggggttcatataacggtcaacagagacccttggcattaaagaaagacaca 28311182  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||   ||||||||||||||||||||    ||| |  |||||||||||||||||||||||||||| | ||||| |||||||||| |||   |||||||    
T  28311183 aaaaaacgcataacatctggtccggattaaattttccaaaaatcactaacaatctggtccggattatattatccgaaccaggggtaatttttgaaatttt 28311282  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| |||||||| |||||||| ||||||||||||||    
T  28311283 gcaggacgcgcgagaaggcagcagggtgggaaaagtaa 28311320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 52 - 416
Target Start/End: Complemental strand, 6963592 - 6963235
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||||||| ||| || |||||| ||||||||| ||||||||||||||||||||||||    
T  6963592 agagccattaatgtgggtttggacggttacaatcactaacacattttcattgactatagtaatgacctaggacttattttaggctataaataggcttcca 6963493  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||  ||||||||||||||||    
T  6963492 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa--tatttttagttttttaggggtgtcagtggtgtcatggtcatt 6963395  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    ||| |||||||||| |||||||| |||      |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  6963394 gttaaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataatggtcaacagagacccttgacattaaagaaagacacag 6963300  T
Q  352 aaaattacataacatctggtccggatttctgttttc-gcaaatcactaacaatctggtccggatta 416  Q
    ||||  ||||||||||||||||||| |||  ||| | | |||||||||||||||||||||||||||    
T  6963299 aaaagcacataacatctggtccgga-ttcaatttcctgaaaatcactaacaatctggtccggatta 6963235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 35319896 - 35320324
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| ||||| ||||||||||||||||| ||||||||||||||||| ||| || |||||| ||| ||||||||||| ||||||||||||||||||    
T  35319896 agagtcattaatgtgagtttggacggttacaactactaacacgttttcattaactatagtaatgacctatgacttgttttaagctataaataggcttcca 35319995  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |                  ||||| | |||||||||| ||||     
T  35319996 tcttcaacaaatactttcattctccacttcacctcttttcttccattttcttcaaatgtttttagttttttaa---ggtgttggtggtgtcatgatcatc 35320092  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    ||||||| ||||||  ||||||| |||      |||||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |     
T  35320093 gttgacctttcatataaaccctgcaat-----agcattgcagcttgtgtggggttcatacaacggtcaacagatacccttgacataaaagaaagacacaa 35320187  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  |||||||||||||||||||||      | |  |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  35320188 aaaagcacataacatctggtccggattatataatccaaaaatcactaacaatctggtccggattatataatccggaccaggggtatttttggaaattttg 35320287  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||| ||||| || ||||| ||||||||    
T  35320288 cagggcgcgcgagaaggcaccaaggtggtaaaagtaa 35320324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 52 - 484
Target Start/End: Complemental strand, 4048271 - 4047846
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||    
T  4048271 agagtcattaatgtaggtttggacggttacaaccactaacacgttttcattgattgtattaataacctaggacttgttttaggctataaataggcttcca 4048172  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || |               ||| |||||| ||||||||||||||||    
T  4048171 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttctaatg--tttttagttttttaggagtgtcggtggtgtcatggtcatt 4048074  T
Q  252 gttgaccg-ttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    |||||| | || ||| |||||||| |||     ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  4048073 gttgactgttttatatgaaccctgcaat-----tgcattgcagcttgtgtggggttcatataacgatcaacagagacccttgacatcaaagaaagacaca 4047979  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  |||||||||||||||  ||||||  | | || | ||||||||||||||| |  | ||||| ||||||  | ||||| ||||||   |||||||    
T  4047978 -aaaaacacataacatctggtctagatttcattatccggatatcactaacaatctgatttgaattatataatccaaatcagggatatttttagaaatttt 4047880  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||||| || || |||||||| ||||||||||    
T  4047879 gcagggcgtgcaagaaggcagcaaggtgggaaaa 4047846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 52 - 483
Target Start/End: Original strand, 168540 - 168973
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||| ||||||    
T  168540 agagccactaatgtgggtttggacgtttacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttagactataaatagccttcca 168639  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||                 |||||||| | ||| ||||||||||||    
T  168640 tcttcaacaaataccttcattcttcacttcacctcttttcttcccttttcttcaaa--tatttttagttttttaggggtgttggtggggtcatggtcatt 168737  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacat---------caaaga 342  Q
    |||||||||||||| |||||||| |||    || | ||| ||||||||| ||||||||||||||||||| ||||||| |||||||          ||| |    
T  168738 gttgaccgttcatatgaaccctgcaat----at-cgttgtagcttgtgtggggttcatataacggtcaatagagaccattgacataaaaaaaaaaaaaaa 168832  T
Q  343 aagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttag 442  Q
    |||||| ||||||  ||||||||||   ||||||||||| ||| |  |||||||||||||||||||||| ||||| ||||||| ||||||||||| || |    
T  168833 aagacacagaaaagcacataacatcacttccggatttctatttccaaaaatcactaacaatctggtccgaattatataatccgaaccaggggtatatttg 168932  T
Q  443 taaattttgcagggcgcgcgaggaggcagcatggtgggaaa 483  Q
     |||||||| ||||| |||||| |||||| | |||||||||    
T  168933 aaaattttgtagggcacgcgagaaggcagtagggtgggaaa 168973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 52 - 333
Target Start/End: Original strand, 2013733 - 2014007
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2013733 agagtcattaatgtggatttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaattggcttcca 2013832  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  2013833 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 2013930  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttga 333  Q
    ||||||| |||||| |||| ||| |||      |||||| |||||  || ||||||||||||||| ||||||||||| ||||    
T  2013931 gttgaccattcatatgaactctgcaat-----agcattgaagcttacgtggggttcatataacggccaacagagaccattga 2014007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 45462392 - 45462234
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  45462392 ttcagagccattattgtgggtttggacggttacaaccactgacacgttttcattgactgtattaatgatctatgacttgttttaggctataaatagactt 45462293  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
     |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  45462292 tcatcttcaacaaatatcttcattcttcacttcacctattttcttccattttcttcaaa 45462234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 225 - 363
Target Start/End: Complemental strand, 45461462 - 45461323
Alignment:
Q  225 aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacaga 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45461462 aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagcttgtgtggggttcatataacggtcaacaga 45461363  T
Q  325 ga-cccttgacatcaaagaaagacatagaaaattacataa 363  Q
    || |||||||||||||||||||||| ||||||||||||||    
T  45461362 gaccccttgacatcaaagaaagacacagaaaattacataa 45461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 358 - 488
Target Start/End: Complemental strand, 45458174 - 45458044
Alignment:
Q  358 acataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggc 457  Q
    |||||||||||| ||| ||||| |||||||| |||| ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  45458174 acataacatctgatccagatttatgttttcgaaaataactaataatctggttcggattatgtaatccggaccaagggtattttagtaaattttgcaaggc 45458075  T
Q  458 gcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     ||||||||||||||| ||||||||||||||    
T  45458074 acgcgaggaggcagcagggtgggaaaagtaa 45458044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 330 - 486
Target Start/End: Original strand, 2016063 - 2016218
Alignment:
Q  330 ttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggacc 429  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||||||  ||| || | |||||||||||||| ||||||||||| ||||||  |||    
T  2016063 ttgacatcaaagaaagacacaaaaaatcacataacatctggtccggatttcgttttccggatatcactaacaatctagtccggattatataatccatacc 2016162  T
Q  430 aggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagt 486  Q
    | ||||||||| ||||||| || | ||||||| || |||||||| ||||||||||||    
T  2016163 atgggtatttttgtaaattatgta-ggcgcgcaagaaggcagcagggtgggaaaagt 2016218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 39807338 - 39807432
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||||||||||| |||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  39807338 atgatctaggatttgttttacgctataaataggctttcatcttcaacaaattccttcattcttcacttcacctcttttcttacattttcttcaaa 39807432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 40602818 - 40602725
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||| | ||||||||||    
T  40602818 atgatctaggacttgtttaatgctataaataggcttacatcttcaacaaactccttcattcttcacttcacctcttttcttactttttcttcaa 40602725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 464
Target Start/End: Original strand, 47985861 - 47986083
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| || |||| || | |||||||||||| ||||||||||||    
T  47985861 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcaggggtcgtctaacggtcaacaaagacccttgaca 47985955  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| ||||   |  | ||||||| || | | |||   || ||||||||||||||||||||||| |||||||||||||||||    
T  47985956 tcaaagaaagacacaaaatatt-catattgtatttgtccgga-ttatatattccggaagcactaacaatctggtccggattacgtaatccggaccagggg 47986053  T
Q  435 tattttagtaaattttgcagggcgcgcgag 464  Q
    |||||  | || |||| |||||||||||||    
T  47986054 tatttatggaatttttccagggcgcgcgag 47986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 27283659 - 27283779
Alignment:
Q  358 acataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggc 457  Q
    ||||||||||||||||||||||   |||||| |||||| ||||||||| || |||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  27283659 acataacatctggtccggatttaatttttcggaaatcattaacaatctagttcggattatataatccgaaccaggggtattttagaaaattttgcagggc 27283758  T
Q  458 gcgcgaggaggcagcatggtg 478  Q
       |||| |||||||| ||||    
T  27283759 atacgagaaggcagcaaggtg 27283779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 116 - 206
Target Start/End: Complemental strand, 20516743 - 20516650
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattct---tcacttcacctcttttcttccattttcttcaa 206  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||||||   ||||||||||||||||||| | ||||||||||    
T  20516743 atctaggatttgttttaggctataaataggcttgcatcttcaacaaattccttcattcttcatcacttcacctcttttcttactttttcttcaa 20516650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 484
Target Start/End: Original strand, 40693162 - 40693404
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || | ||| |||     ||||||||||||| ||  ||| || |||||||||||||||||||| ||||||    
T  40693162 tggtgtcatggtcattgttgaccgctcatacgacctctgcaat-----tgcattgcagcttatgcgggggtcgtataacggtcaacagagacctttgaca 40693256  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    |||| |||||||| | || ||| |||| | |  | ||||||| || | | |||   || ||||||||||||||||||||||| |||||||||||||| ||    
T  40693257 tcaaggaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatctggtccggattacgtaatccggaccagagg 40693354  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||  | || |||| || ||||| |||| ||||| || ||||||||||    
T  40693355 tatttatggaatttttacaaggcgcacgagaaggcaacaaggtgggaaaa 40693404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 38990832 - 38990939
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || || || |||     ||||||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  38990832 tggtgtcatggtcattgttgaccgctcatacgacccttgcaat-----tgcattgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 38990926  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  38990927 tcaaagaaagaca 38990939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 489
Target Start/End: Complemental strand, 17647146 - 17646901
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| |||||  | ||||| |||||||     |||||| || ||  ||| || |||||||||||||||||||||||||||    
T  17647146 tggtgtcatggtcattgttgaccgctcatactacccctgcaattgca-----ttgcaggttatgcgggggtc-tataacggtcaacagagacccttgaca 17647053  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    | ||||||||||| | || ||| | || | | || ||| |||||| | |||||  ||| |||||| ||||||||  |||  | | |||||||||||||||    
T  17647052 ttaaagaaagacacataatatt-cgtagcgtatgcgtctggattt-tattttctgaaaacactaa-aatctggtttggaaaacgaaatccggaccagggg 17646956  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    |||| | | || |||||||||||||| ||| ||||||||||||||| ||||||||    
T  17646955 tattattgaaatttttgcagggcgcgtgagaaggcagcatggtgggtaaagtaaa 17646901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 13721300 - 13721192
Alignment:
Q  236 tggtgtcatggtcatt-gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    |||||||||||||||| |||||||| ||||| || ||||| |||||||     ||||||||| ||| ||| || ||||||||| ||||||||||||||||    
T  13721300 tggtgtcatggtcatttgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgtgggggtcgtataacggttaacagagacccttgac 13721206  T
Q  335 atcaaagaaagaca 348  Q
    ||||||||||||||    
T  13721205 atcaaagaaagaca 13721192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 34953601 - 34953705
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    ||||||||||  || |||||| | |||||||||||||| |||||||||||||||||| || |||||| ||||||   ||| |||||||||||||||| ||    
T  34953601 aacacgttttatttgactgtagttatgatctaggacttattttaggctataaataggtttgcatcttcaacaaacttctttattcttcacttcacctttt 34953700  T
Q  189 ttctt 193  Q
    |||||    
T  34953701 ttctt 34953705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 53511478 - 53511375
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| || |||| || ||||| |||| ||||||||||||||||    
T  53511478 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcaggggtcgtataatggtctacagagacccttgaca 53511384  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  53511383 tcaaagaaa 53511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 56084189 - 56084099
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||||||||||||||| |||||||||||| |||| ||| || ||||||| | ||||||||||||||| | ||||||||| | |||||||    
T  56084189 atgatctaggacttgtttaaggctataaatatgcttgcatattcaacaaattcattcattcttcacttctcatcttttcttactttttctt 56084099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 45659693 - 45659801
Alignment:
Q  235 atggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    ||||||||||||||||||| ||||| ||||| || || || ||||||      ||||||||| ||  ||| || ||||||||||||||||||||||||||    
T  45659693 atggtgtcatggtcattgtcgaccgctcatacgacccatgcaattgcg-----ttgcagcttatgcggggatcgtataacggtcaacagagacccttgac 45659787  T
Q  335 atcaaagaaagaca 348  Q
    ||||||||||||||    
T  45659788 atcaaagaaagaca 45659801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 49604553 - 49604495
Alignment:
Q  135 ctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    |||||||||||||| |||||| ||||||| ||||||||  |||||||||||||||||||    
T  49604553 ctataaataggcttgcatcttcaacaaattccttcattgatcacttcacctcttttctt 49604495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 488
Target Start/End: Original strand, 16684494 - 16684672
Alignment:
Q  309 tataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacat-ctggtccggatt-tctgttttcgcaaatcactaacaatctg 406  Q
    ||||| |||||||||||||||||||||||||||||||||| | || ||| |||| | |  | ||||||||| |||| || || ||| |||||||||||||    
T  16684494 tataatggtcaacagagacccttgacatcaaagaaagacacaaaatatt-catatcgtatttgtccggattatctg-ttccggaaa-cactaacaatctg 16684590  T
Q  407 gtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||  ||| || | |||| |||||||||||| ||| | || |||||||  ||||| ||| ||||| |||||||| ||||||||    
T  16684591 gtatggaatacgaaatctggaccaggggtaattttggaatttttgcatagcgcgtgagaaggcaacatggtggaaaaagtaa 16684672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 39807459 - 39807562
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||| |||||||||||||||||||  | ||||| ||||||      ||||||||| || | || | |||||| |||||||||||||| ||||||    
T  39807459 tggtgtcatgatcattgttgaccgttcatataacccctgcaattgct-----ttgcagcttatgcaagggttatataatggtcaacagagacctttgaca 39807553  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  39807554 tcaaagaaa 39807562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 51889062 - 51888955
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||| |||||||||||||| | ||| || ||||| ||||||| ||||||     || ||  | | || |||||||||||||||||||| ||||||    
T  51889062 tggtgtcatagtcattgttgaccgcttatacgacccctgcaattgcattgcatt-----ttatgcggcggtcgtataacggtcaacagagaccattgaca 51888968  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  51888967 tcaaagaaagaca 51888955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 55614073 - 55614137
Alignment:
Q  284 tgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||| ||| || |||| || |||||||||||||| ||| |||||||||||||||||||||    
T  55614073 tgcattgcaccttatgcaggggtcgtataacggtcaacatagatccttgacatcaaagaaagaca 55614137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 348
Target Start/End: Complemental strand, 53269290 - 53269248
Alignment:
Q  306 tcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  53269290 tcatataacggtcaatagagaccattgacatcaaagaaagaca 53269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 55614182 - 55614252
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||  | || |||| || ||||||||||    
T  55614182 cactaacaatctggtccagattacgtaatctggaccaggggtatttatggaatttttacaaggcgcgcgag 55614252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 488
Target Start/End: Complemental strand, 33280859 - 33280806
Alignment:
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||  |||||||| |||||| | ||||||||||||||    
T  33280859 tattttagtaaattttgcagaacgcgcgagaaggcagtagggtgggaaaagtaa 33280806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 56463331 - 56463376
Alignment:
Q  5 gaggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||    
T  56463331 gaggaggagagggtgggagaggatggtggggtttggaaggctattt 56463376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 489
Target Start/End: Complemental strand, 42660228 - 42660143
Alignment:
Q  408 tccggattatgtaatccggacc----aggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    ||||||||| |||||||||||     ||||||||||| | ||||||| ||||||||||||| |||||  | |||||||||||||||    
T  42660228 tccggattacgtaatccggactgcaaaggggtatttttgaaaattttacagggcgcgcgagaaggcaatagggtgggaaaagtaaa 42660143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 38991028 - 38991071
Alignment:
Q  444 aaattttgcagggcgcgcgaggaggcagcatggtgggaaaagta 487  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||    
T  38991028 aaattttgcagggcgcgcgagaaggcaacatggtggaaaaagta 38991071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 4048597 - 4048559
Alignment:
Q  12 agagagtgggagaagatggtggggtttggaaggctattt 50  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  4048597 agagggtgggagaggatggtggggtttggaaggctattt 4048559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 13721427 - 13721344
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaa 206  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| ||||||||||||    
T  13721427 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaa 13721344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 20516622 - 20516592
Alignment:
Q  235 atggtgtcatggtcattgttgaccgttcata 265  Q
    |||||||||||||||||||||||||||||||    
T  20516622 atggtgtcatggtcattgttgaccgttcata 20516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 53269204 - 53269114
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    ||||||||||||| | |||| || ||||||||||||| || |||||| | || |||| ||  ||||||||| ||||| |||||||| ||||    
T  53269204 cactaacaatctgattcggaatacgtaatccggaccatggatatttttggaatttttacaaagcgcgcgagaaggcaacatggtggaaaaa 53269114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 9183338 - 9183387
Alignment:
Q  132 aggctataaataggcttccatctttaacaaataccttcattcttcacttc 181  Q
    ||||||||||| ||||| |||||| ||||||| | |||||||||||||||    
T  9183338 aggctataaattggctttcatcttcaacaaattctttcattcttcacttc 9183387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 13721101 - 13721061
Alignment:
Q  447 ttttgcagggcgcgcgaggaggcagcatggtgggaaaagta 487  Q
    |||||||||||||||||| ||||| || |||||||||||||    
T  13721101 ttttgcagggcgcgcgagaaggcaacaaggtgggaaaagta 13721061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 265
Target Start/End: Original strand, 34953746 - 34953774
Alignment:
Q  237 ggtgtcatggtcattgttgaccgttcata 265  Q
    |||||||||||||||||||||||||||||    
T  34953746 ggtgtcatggtcattgttgaccgttcata 34953774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 46255009 - 46254569
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  46255009 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagg 46254910  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               |||| ||||||||||||||||    
T  46254909 cttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgtttttagtttttt--agggatgtcgatggtgtcatg 46254812  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  46254811 gtcattgttgaacgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcttataacggtcaacaaagacccttgacatcaaagaaag 46254712  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    |||  ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46254711 acacggaaaattacataacatctggtccagatttctgtttccggaaatcactaacaatctgatccggattatgtaatccggaccaggggtattttagtaa 46254612  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  46254611 attttgcagggcgcgcgaggaggcagcagggtgggaaaagtaa 46254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 35794616 - 35794180
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| || ||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  35794616 agagccattaatatggatttggacggttacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggcttcca 35794517  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||||||||| ||| |||||||||| |||||||||||||                 |||||||||||||||||||||||||||    
T  35794516 tcttcaacaaataccttcattcttcacatcagctcttttcttacattttcttcaaatattttttagtttttttaggggtgtcgatggtgtcatggtcatt 35794417  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35794416 gttgaccgttcataggaaccctgcgattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacagag 35794317  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||||||||||||||| |||||||||| ||||| |  ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  35794316 aaaattacataacatctagtccggatttttgtttccagaaatcactaacaatctggttcggattatgtaatccgaaccagggttattttagtaaattttg 35794217  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| || ||||| |||||| | ||||||||||||||    
T  35794216 caggtcgtgcgagaaggcagtagggtgggaaaagtaa 35794180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 49 - 484
Target Start/End: Original strand, 34847869 - 34848305
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||| ||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  34847869 ttcagagccattaatgtgggtttggacagttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttatgctataaatagg 34847968  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||                 |||||||||||||||||||||    
T  34847969 cttccatcttcaacagataccttcattcttcacttcacctcttttcttacattttcttcaaa--aaaatttagttttttaggggtgtcgatggtgtcatg 34848066  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  34848067 gtcattgttgaccgttcataggaaccctacaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagaccattgacatcaaagaaag 34848166  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||||||||||||||||||  |||||||||||||||||||| || ||||||||||||||||| |||| || |||||||||||||||||| ||||||| |||    
T  34848167 acatagaaaattacataaattctggtccggatttctgtttccggaaatcactaacaatctgatccgaataatgtaatccggaccagggatattttaataa 34848266  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||| |||  ||||||| |||||||| ||||||||||    
T  34848267 attttgtaggatgcgcgagaaggcagcagggtgggaaaa 34848305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 36312076 - 36312514
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||     
T  36312076 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgtttttattgactgtattaatgacctagaacttgttttaggctataa-taga 36312174  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||  |               ||||||||| |||||||||||    
T  36312175 cttccatcttcaacaaatatcttcattgttcacttcacctcttttcttacattttcttcaattgttttctagtttttt-aggggtgtcaatggtgtcatg 36312273  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  36312274 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttatgtggggttcatataacggttaacagagacctttgacatcaaagaaag 36312373  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  36312374 acatagaaaattacataacatct-gtccggatttctgttttcggaaa-cactaacaatctggtccggattacgtaatccgaaccagaggtattttagtaa 36312471  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| || | |||||||||||||||| ||||||||||||||    
T  36312472 attttgtagagtgcgcgaggaggcagcagggtgggaaaagtaa 36312514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 43458326 - 43457890
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||     
T  43458326 ttcagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggcta 43458227  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||| |||||||| ||||||    
T  43458226 c-atcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgttgatggtgttatggtc 43458130  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  43458129 attgttgaccgttcataggaaccctgcaatagcaatgcattgcagtttgtgtggggttcatataacggtcaacagagacccttgacatgaaagaaagaca 43458030  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||  |||||| || ||||||| |||||   || || ||||||||||||||||||| |||| ||| |||||||||||||| ||||||| | |||||    
T  43458029 caaaaaagcacataatatttggtccgaatttcgtattccgaaaatcactaacaatctggttcggaatatataatccggaccaggagtatttttgaaaatt 43457930  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||| ||| |||||||| |||| |||||||||    
T  43457929 ttgcagggcgcgtgagaaggcagcaaggtgtgaaaagtaa 43457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 51 - 488
Target Start/End: Original strand, 14816652 - 14817080
Alignment:
Q  51 cagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcc 150  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  14816652 cagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagcctataaataggcttcc 14816751  T
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcat 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |               || ||||||| |||||||||||||||    
T  14816752 atcttcaacaaataccttcattcttcacttcacctcttttcttcctttttcttcaaatg---tttagtttttttagaggtgtcggtggtgtcatggtcat 14816848  T
Q  251 tgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    ||||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  14816849 tgttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagacctttgacatcaaagaaagacaaa 14816943  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  ||||||||||| ||||| ||||   |||||  |||||||||| ||||||||||||||||| |||||| || | |||||||||| | |||||||    
T  14816944 aaaaagcacataacatcttgtccgaattt-aattttccaaaatcactaataatctggtccggattatataatccagatcgggggtatttttggaaatttt 14817042  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| |||||||| |||||| | ||||  ||||||||    
T  14817043 gcaggacgcgcgagaaggcagtagggtgaaaaaagtaa 14817080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 51 - 488
Target Start/End: Original strand, 15263648 - 15264076
Alignment:
Q  51 cagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcc 150  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  15263648 cagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagcctataaataggcttcc 15263747  T
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcat 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |               || ||||||| |||||||||||||||    
T  15263748 atcttcaacaaataccttcattcttcacttcacctcttttcttcctttttcttcaaatg---tttagtttttttagaggtgtcggtggtgtcatggtcat 15263844  T
Q  251 tgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    ||||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  15263845 tgttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagacctttgacatcaaagaaagacaaa 15263939  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  ||||||||||| ||||| ||||   |||||  |||||||||| ||||||||||||||||| |||||| || | |||||||||| | |||||||    
T  15263940 aaaaagcacataacatcttgtccgaattt-aattttccaaaatcactaataatctggtccggattatataatccagatcgggggtatttttggaaatttt 15264038  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| |||||||| |||||| | ||||  ||||||||    
T  15264039 gcaggacgcgcgagaaggcagtagggtgaaaaaagtaa 15264076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 116 - 473
Target Start/End: Complemental strand, 44863090 - 44862735
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnn 215  Q
    ||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |          
T  44863090 atctaggacttgttttaagctataaatatgcttcaatcttgaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttt 44862991  T
Q  216 nnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacg 315  Q
             |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| |||||| ||||||||||||||    
T  44862990 agtttttt-aggggtgtcgatggtgtcatggtcattgttgaccgttcatag-aaccctgcaatttcaatgcattgcagtttgtgtggggttcatataacg 44862893  T
Q  316 gtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggatt 415  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||| ||||||||| || | ||||||    
T  44862892 gtcaacagagacccttaacatcaaagaaagacacagaaaattacataacatctggtttggatttctgttttcggaaataactaacaatttgctacggatt 44862793  T
Q  416 atgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagca 473  Q
    || |||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  44862792 atataatccagaccatgagtattttagtaaattttgcagggtgcgcgaggaggcagca 44862735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 49 - 412
Target Start/End: Original strand, 25529103 - 25529462
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  25529103 ttcagagtcattaatgtgggtttggacggttacaaccactgacacgtattcattgattgtattaatgacctaggacttgttttaggctataaataggctt 25529202  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||    
T  25529203 ccatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa-tatttttagtttttttaggggtgtcgatggtgtcatggtc 25529301  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  25529302 attgttgaccgttcataagaaccctgcaattgcaatgtattgcagcttgtgt-gggttcatataacggtca--agagacccttgacatcaaagaaagaca 25529398  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccgg 412  Q
     | ||||  |||||| ||||||||||||||||   || || |||||||||||||||||||||||    
T  25529399 caaaaaagcacataatatctggtccggatttcgtattccggaaatcactaacaatctggtccgg 25529462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 33951074 - 33950633
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |    
T  33951074 ttcagagccattaatgtgggtttggatggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataag 33950975  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
     ||| ||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  33950974 tttctatcttcaacaaatacctttattcttcactttacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 33950876  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  | ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  33950875 gtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaacttgtgtggggttcatataacggtcaatagagacccttgacataaaagaaag 33950776  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| | |||||||||||| |||||||||| |||||||||| || ||||||||||||||| | ||||||||||  ||||||||| |  |||||||| || |    
T  33950775 acacaaaaaattacataagatctggtccgaatttctgtttccggaaatcactaacaatccgatccggattatacaatccggacaaaaggtattttggtca 33950676  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |  |  ||||||||||||| |||| | |  |||||||||||||    
T  33950675 aaatcacagggcgcgcgagaaggctgtagagtgggaaaagtaa 33950633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 287 - 469
Target Start/End: Complemental strand, 43270166 - 43269984
Alignment:
Q  287 attgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgtttt 386  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||     
T  43270166 attgcagcttgtgtggggttcatataacggtcaacagagaccattgacatcaaagaaagacacaaaaaattacataacatctggtccggatttctgattc 43270067  T
Q  387 cgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggc 469  Q
     |  ||| |||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||||||||||||| ||||    
T  43270066 tggtaattactaacaatctgatccggattatgtaatccggatcagggatactttaataaattttgcagggcgcgcgagaaggc 43269984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 106 - 406
Target Start/End: Original strand, 42321186 - 42321479
Alignment:
Q  106 tgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttca 205  Q
    ||||||||| | ||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  42321186 tgtattaataacctatgacttgttttaggttataaataggcttccatcttcaacaaatatcttcattcttcacttcacctcttttcttccattttcttcg 42321285  T
Q  206 aacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggt 305  Q
    || |               || ||||||| |||| ||||||||||||||||||||||||| |||||||| |||     |||||||||||||||||  |||    
T  42321286 aatg--tttttagttttttagaggtgtcggtggtttcatggtcattgttgaccgttcatatgaaccctgcaat-----tgcattgcagcttgtgtgtggt 42321378  T
Q  306 tcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgtttt-cgcaaatcactaacaatc 404  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||| ||||  ||||||||||| ||| | |||| |||||| || | |||||||||||||    
T  42321379 tcatataacggtcaacaaagactcttgacataaaaaaaagacataaaaaagcacataacatcttgtctgaattt-tgttttccggatatcactaacaatc 42321477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 236 - 470
Target Start/End: Original strand, 15032723 - 15032951
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  15032723 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 15032817  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatt-tctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggg 433  Q
    ||||||||||||| | || ||| |||  | |  | ||||  ||| | | || | ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  15032818 tcaaagaaagacacaaaatatt-catgtcgtatttgtccatattatatattct-gcaaa-cactaacaatctggtccggattacgtaatccggaccaggg 15032914  T
Q  434 gtattttagtaaattttgcagggcgcgcgaggaggca 470  Q
    ||||||  | || ||||||||||||| |||| |||||    
T  15032915 gtatttatgaaatttttgcagggcgcacgagaaggca 15032951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 1377470 - 1377355
Alignment:
Q  69 tttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacctt 168  Q
    |||||| |||||  ||||| |||||||||||||| |||||| | ||||  || ||||| |||||||||||||||||||||||||||| |||||||  |||    
T  1377470 tttggatggttagcaccacaaacacgttttcattgactgtacttatgacatatgacttattttaggctataaataggcttccatcttcaacaaatttctt 1377371  T
Q  169 cattcttcacttcacc 184  Q
    ||||||||||||||||    
T  1377370 cattcttcacttcacc 1377355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 1852250 - 1852136
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    |||||||||||||| | |||| | |||| |||||  ||||||||||||||| ||| |||| |||||| ||||||  ||||||||||||||||||||||||    
T  1852250 aacacgttttcattgattgtacttatgacctaggtattgttttaggctatatataagcttgcatcttgaacaaagtccttcattcttcacttcacctctt 1852151  T
Q  189 ttcttccattttctt 203  Q
    ||||| |||||||||    
T  1852150 ttcttacattttctt 1852136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 38257614 - 38257860
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||   |  || |||||||||||| ||||||||||||||    
T  38257614 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgagtgtcgtataacggtcaatagagacccttgaca 38257708  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | | |  |||||||||     || || ||| |||||||||||||||||| |||| |||||||||||||||||    
T  38257709 tcaaagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggaaa-cactaacaatctggtccgaattacgtaatccggaccagggg 38257806  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || ||||||||||| |||||| ||| | || ||||| ||||||||    
T  38257807 tatttatggaatttttgcagggcacgcgagaaggaaacagggtggaaaaagtaa 38257860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 242 - 484
Target Start/End: Complemental strand, 26791943 - 26791707
Alignment:
Q  242 catggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaag 341  Q
    |||||||||||||||||| ||||| || || || |||     ||||||||||||| ||| ||| || |||||||||||| ||||||||||||||||||||    
T  26791943 catggtcattgttgaccgctcatacgacccatgcaat-----tgcattgcagcttatgtgggggtcgtataacggtcaatagagacccttgacatcaaag 26791849  T
Q  342 aaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    ||||||| | || ||| |||| | |  | ||||||| || | | |||   || |||||||||||||||| |||||| |||||||  |||||||||||||     
T  26791848 aaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatctggtctggattacgtaatccaaaccaggggtattta 26791751  T
Q  441 agtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
     | || ||||||||| |||||||| ||||| || ||||||||||    
T  26791750 tggaatttttgcaggacgcgcgagaaggcaacagggtgggaaaa 26791707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 31326672 - 31326774
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||| | ||||| ||||||||||||||  ||||||||||| || |||||| |||||||  |||||||||||||||||||||||||||| | |||||||    
T  31326672 actgtaattatgatttaggacttgttttatactataaataggtttgcatcttcaacaaatttcttcattcttcacttcacctcttttcttactttttctt 31326771  T
Q  204 caa 206  Q
    |||    
T  31326772 caa 31326774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 471
Target Start/End: Complemental strand, 37998621 - 37998394
Alignment:
Q  238 gtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatc 337  Q
    |||||||||||||||||||||| ||||| || ||||| ||||| |     |||||| || || |||| || |||||||||||||||||||| ||||||||    
T  37998621 gtgtcatggtcattgttgaccgctcatacgacccctgcaattgta-----ttgcagtttatgcaggggtcgtataacggtcaacagagacctttgacatc 37998527  T
Q  338 aaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggta 436  Q
    ||||||||||| | || ||| |||| | | |  |||||||||     || || ||| |||||||||||| |||||||||||||||||| |||||||||||    
T  37998526 aaagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggaaa-cactaacaatctagtccggattatgtaatccagaccaggggta 37998429  T
Q  437 ttttagtaaattttgcagggcgcgcgaggaggcag 471  Q
    ||||   || ||||||||||| || ||| ||||||    
T  37998428 tttttagaatttttgcagggcacgtgagaaggcag 37998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 7255581 - 7255827
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || | ||| |||||||     ||||||||| ||  | | || |||||||||||||||||||||||||||    
T  7255581 tggtgtcatggtcattgttgactgctcatacgacctctgcaattgca-----ttgcagcttatgcggaggtcgtataacggtcaacagagacccttgaca 7255675  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||| ||| | || ||| |||| | | |  ||| |||||  | | |||  ||| |||||||||| |||||||||||| |||||||| ||||||||    
T  7255676 tcaaagaaatacacaaaatatt-catatcgtatttgtctggatta-tatattccgaaaacactaacaatttggtccggattacgtaatccgaaccagggg 7255773  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||| ||||||||| ||||| ||  |||||||||||||    
T  7255774 tatttatggaatttttgcagagcgcgcgagaaggcaacaaagtgggaaaagtaa 7255827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 26188232 - 26188326
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||| ||||||| ||||||||| ||||||||||| | ||| || ||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  26188232 atgacctaggacatgttttaggttataaataggcatgcatgttcaacaaattccttcattcttcacttcacctttttactttcattttcttcaaa 26188326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 19647046 - 19646929
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    ||||||||||  || |||||| | ||||||||||||| |||| || ||||||||| ||||  ||||| ||||| | ||||||||||| ||||||||||||    
T  19647046 aacacgttttacttgactgtaattatgatctaggactggtttaagactataaatatgcttgaatcttcaacaatttccttcattctttacttcacctctt 19646947  T
Q  189 ttcttccattttcttcaa 206  Q
    ||||| |||||| |||||    
T  19646946 ttcttacattttgttcaa 19646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 29332463 - 29332569
Alignment:
Q  237 ggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacat 336  Q
    ||||||||||||||||||||||| | ||| || ||||| |||     ||||||||||||| ||  ||| || ||||||||||||||||||||||||||||    
T  29332463 ggtgtcatggtcattgttgaccgcttatacgacccctgtaat-----tgcattgcagcttatgcgggggtcgtataacggtcaacagagacccttgacat 29332557  T
Q  337 caaagaaagaca 348  Q
     |||||||||||    
T  29332558 taaagaaagaca 29332569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 484
Target Start/End: Original strand, 35585241 - 35585484
Alignment:
Q  236 tggtgtcatgg-tcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    ||||||||||| ||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  | | || |||||||||||||||| |||||||||    
T  35585241 tggtgtcatgggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcggaggtcgtataacggtcaacagaaacccttgac 35585335  T
Q  335 atcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggg 433  Q
    |||||||||||||| | || ||| |||| | |  | |||||||||     ||||  ||| |||||||||||||||| ||||||  |||||||||||||||    
T  35585336 atcaaagaaagacacaaaatatt-catatcgtatttgtccggattgtatatttcagaaa-cactaacaatctggtctggattacataatccggaccaggg 35585433  T
Q  434 gtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    || |||  | || ||||||||||| |||||| ||||  || ||||||||||    
T  35585434 gtgtttatggaatttttgcagggcacgcgagaaggctacagggtgggaaaa 35585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 1906590 - 1906679
Alignment:
Q  114 tgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    ||||||||||| ||||| || ||||||||||||||  ||||| ||||| | ||| ||||||||||||||||||||||||| | |||||||    
T  1906590 tgatctaggacatgtttaagactataaataggcttgaatcttcaacaagttcctgcattcttcacttcacctcttttcttactttttctt 1906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 3601033 - 3601126
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||||| |||| |||||||||||||||||||| ||| |||||| |||||||  |||| |||||||||||| |||||||||| |  |||||||||    
T  3601033 atgatcaaggatttgttttaggctataaatagacttgcatcttcaacaaatttcttcgttcttcacttcaactcttttcttactatttcttcaa 3601126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 43749373 - 43749480
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||| ||| |  |||||||||||||| ||| ||||||||    
T  43749373 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgtgggggttgtataacggtcaacaaagatccttgaca 43749467  T
Q  336 tcaaagaaagaca 348  Q
    | |||||||||||    
T  43749468 ttaaagaaagaca 43749480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 10907068 - 10907012
Alignment:
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||||| ||||| | |||||||||||||||||||||| |||||| |||||||||||||    
T  10907068 atcttcaacaatttccttcattcttcacttcacctcctttcttacattttcttcaaa 10907012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 108656 - 108549
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggt-tcatataacggtcaacagagacccttgac 334  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||||| |||      |||| ||  |||  || |||||||||||||||||| |||||||    
T  108656 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgcattgc------gcttatgcggggggtcgtataacggtcaacagagatccttgac 108563  T
Q  335 atcaaagaaagaca 348  Q
    |||||| |||||||    
T  108562 atcaaataaagaca 108549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 26792070 - 26791986
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  26792070 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 26791986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 43749525 - 43749571
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    |||||||||||| |||| ||||| |||||||| ||||||||||||||    
T  43749525 cactaacaatctagtccagattacgtaatccgaaccaggggtatttt 43749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 1852100 - 1852071
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  1852100 tggtgtcatggtcattgttgaccgttcata 1852071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 1869351 - 1869322
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  1869351 tggtgtcatggtcattgttgaccgttcata 1869322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 26188356 - 26188456
Alignment:
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    |||||||||||| ||||||||||||||  | ||||  ||||||      ||||||||| ||  ||| | ||||||||||||||||||||| || ||||||    
T  26188356 tgtcatggtcatagttgaccgttcatataacccctacaattgct-----ttgcagcttatgcgggggttatataacggtcaacagagacctttaacatca 26188450  T
Q  339 aagaaa 344  Q
    ||||||    
T  26188451 aagaaa 26188456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 29332640 - 29332681
Alignment:
Q  447 ttttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||| ||||| || ||||||||||||||    
T  29332640 ttttgcagggcgcgcgagaaggcaacaaggtgggaaaagtaa 29332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 1377323 - 1377287
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  1377323 atataacggtcaacagagacctttgacttcaaagaaa 1377287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 7255449 - 7255532
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | ||||||||||||  ||  |||| |||||| ||||||||||||    
T  7255449 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc-tttaccctcctttcttacattttcttcaa 7255532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 44866503 - 44866459
Alignment:
Q  6 aggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    ||||| |||| |||||||| |||||||||||||| ||||||||||    
T  44866503 aggaggagagggtgggagaggatggtggggtttgaaaggctattt 44866459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 62 - 488
Target Start/End: Complemental strand, 12723802 - 12723374
Alignment:
Q  62 atgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaa 158  Q
    |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || |||||| ||    
T  12723802 atgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggttttcatcttcaa 12723703  T
Q  159 caaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgacc 258  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |               ||||||||||||||||||||||||||||||||||    
T  12723702 caaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtcattgttgacc 12723604  T
Q  259 gttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaatta 358  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  12723603 gttcataggaaccctgcaattgcaatgcattgcaacttgtgtagggtttatataacggtcaatagagacccttgacatcaaagaaagacacagaaaatta 12723504  T
Q  359 cataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcg 458  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12723503 cataacatctggttcggatttctgttttcggaaatcactaacaatctgatccggattatgtaatccgaaccaggggtattttagtaaattttgcagggcg 12723404  T
Q  459 cgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||| ||||||||||||||    
T  12723403 cgcgaggaggcagcagggtgggaaaagtaa 12723374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 12785298 - 12784857
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||| |||| || |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12785298 ttcatagccgttaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagg 12785199  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  12785198 cttcaatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 12785100  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12785099 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcaacttgtgtagggtttatataacggtcaacagagacccttgacatcaaagaaag 12785000  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||    
T  12784999 acacagaaaattacataacatctggttcggatttctgttttcggaaatcactaaccatccgatccggattatgtaatccgaaccaggggtattttagtaa 12784900  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||  ||||||| |||||||||||||||| ||||||||||||||    
T  12784899 atggtgcagggtgcgcgaggaggcagcagggtgggaaaagtaa 12784857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 18809125 - 18808682
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||| ||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||     
T  18809125 ttcagagccattaatgtaggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaatagt 18809026  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnn-aggggtgtcgatggtgtcat 244  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |                ||||||||||||||||||||    
T  18809025 cttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttttagttttttaggggtgtcgatggtgtcat 18808926  T
Q  245 ggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaa 344  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18808925 ggtcattgttgaccgtacataggaaccttgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaa 18808826  T
Q  345 gacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagta 444  Q
    |||| || |||||||||||||||||||||| |||||| ||| |  ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  18808825 gacacaggaaattacataacatctggtccgaatttctatttccagaaatcactaacaatctgatccggattatgtaatctggaccaagggtattttagta 18808726  T
Q  445 aattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  18808725 aattttgcagggcgcgtgaggaggcagcatggtgggaaaagtaa 18808682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 13822066 - 13822506
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||| |||| |||||||||||   |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  13822066 ttcagagccattaatgtggatttgaacggttacaacaaccactaacacgttttcattgactgtattaatgatctatgacttgttttaggctataaatagg 13822165  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
     ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  13822166 tttccatcttcaacaaataccttcattcttcacctcacctcttttcttacattttcttcaaatgttttctagtttttt-aggggtgtcgatggtgtcatg 13822264  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||  ||||||||||||    
T  13822265 gtcattgttgaccgttcatagaaaccctgcaattgcaatgcattgcaacttgtgtggggttcatataacggtcaacatagaccctttgcatcaaagaaag 13822364  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    |||  |||||||||||||||||||||| |||||| |||||| | ||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  13822365 acaccgaaaattacataacatctggtctggatttttgtttttg-aaaacactaactatctagtccggattacgtaatccggaccaggggtattttagtaa 13822463  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  13822464 attttgcagggcgcgcgaggaggcagcaaggtgggaaaagtaa 13822506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 80 - 488
Target Start/End: Original strand, 16513620 - 16514028
Alignment:
Q  80 acaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcact 179  Q
    ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||  ||||||||||||||| || || |||||||||||||||||||||||    
T  16513620 acaaccactaacacgttttcatcgactgtattaatgacctatgacttgttttaaactataaataggcttcaattttcaacaaataccttcattcttcact 16513719  T
Q  180 tcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaatt 279  Q
    |||||||||||||||||||||||||||  |               ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  16513720 tcacctcttttcttccattttcttcaattgtttttttagttttttaggggtgtcaatggtgtcatggtcattgttgaccgttaataggaaccctgcaatt 16513819  T
Q  280 gcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggattt 379  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16513820 gcaatgcattgcagcttgtgtggggtttatataacggtcaccagagacccttgacatcaaagaaagacacagaaaattacataacatatggtccggattt 16513919  T
Q  380 ctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgg 479  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||| ||  |||||||| | ||||||||||||||||||||| |||||||| |||||    
T  16513920 ctgttttcgaaaatcactaacaatctgatccggattatgtaatccggatcaaaggtatttttggaaattttgcagggcgcgcgagaaggcagcagggtgg 16514019  T
Q  480 gaaaagtaa 488  Q
    |||||||||    
T  16514020 gaaaagtaa 16514028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 63 - 471
Target Start/End: Complemental strand, 3556748 - 3556341
Alignment:
Q  63 tgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaa 162  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  3556748 tgtgggtttggacgattacaagcactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatatgcttccatctttaacaaa 3556649  T
Q  163 taccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttc 262  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||||||||||||||||    
T  3556648 ttccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtcattgttgaccgttc 3556550  T
Q  263 ataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacata 362  Q
    ||||||||| || |||||||||||||||||||||||||  ||||||||||||| |||| ||||||| ||||||||||||||||||| | ||| |||||||    
T  3556549 ataggaaccttgcaattgcaatgcattgcagcttgtgtgaggttcatataacgatcaatagagacctttgacatcaaagaaagacacataaagttacata 3556450  T
Q  363 acatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcg 462  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||| || || |||||||| |||||||||||||||||||||||||||   | ||||    
T  3556449 acatctggtctggatttctgttttcgaaaataactaacaatctggtccagaataagtaatccgaaccaggggtattttagtaaattttgcacaacacgcg 3556350  T
Q  463 aggaggcag 471  Q
    |||||||||    
T  3556349 aggaggcag 3556341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 49 - 464
Target Start/End: Complemental strand, 8734834 - 8734420
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  8734834 ttcagagccattaatgtgggtttggacgattacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctt 8734735  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               ||||||||||||||||||||||||    
T  8734734 ccatctg-aacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 8734637  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  8734636 attgttgaccgttcataggaaccatgcaattgcaatgcaatgcagcttgtgtggggttcatataacggtcaacagagatccttgacatcaaagaaagaca 8734537  T
Q  349 -tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaat 447  Q
      | |||||||||||| ||||| |||| |||||||||| |  ||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||    
T  8734536 caaaaaaattacataatatctgatccgaatttctgtttccaaaaatcactaacaatctaatccggattatgtaatccggaccaggaatattttagtaaat 8734437  T
Q  448 tttgcagggcgcgcgag 464  Q
    ||| ||||  |||||||    
T  8734436 tttacaggatgcgcgag 8734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 37030261 - 37030683
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  37030261 agagccattaatgtgggtttggatggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagacttcca 37030360  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  37030361 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttt---------aggggtgtcggtggtgtcatggtcatt 37030451  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |     
T  37030452 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtgaggttcatataacggtcaacagagacccttgacatcaaagaaagacacaa 37030546  T
Q  352 aaaattacataacatctggtccggatttctgtttt-cgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
    ||||   ||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||    
T  37030547 aaaagcgcataacatctggtccggattt-tgttttccggatatcactaacaatctggtccggattatataatccggaccaggggtacttttggaaatttt 37030645  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| | |||||| |||||||||||||| ||||||||    
T  37030646 gcaggacacgcgagaaggcagcatggtggaaaaagtaa 37030683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 8197549 - 8197111
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  8197549 agagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagactataaataggctt 8197450  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||| |               ||||||||||||||||||||||||    
T  8197449 ccatcttcaacaaataccttcattcttcactttacctattttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 8197351  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  8197350 attgttgactgttcataggaaccatgcaattgcaatgcattgcagcttatgtggggttcatataacggtcaatagagaccattgacatcaaagaaagaca 8197251  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||   ||||||  |||||| |  ||||| || |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  8197250 caaaaaattactatacatcttttccggaatcatgtttccggaaatcactaacaatctggtccggattatgtaatccaaaccagaggtattttagtaaatt 8197151  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| ||| ||||| |||||||  ||||||||||||||    
T  8197150 ttgcagagcgtgcgagaaggcagcggggtgggaaaagtaa 8197111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 49 - 450
Target Start/End: Complemental strand, 27114445 - 27114045
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  27114445 ttcagagccattaatgtgggtttggacggttacaaccaccaacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggctt 27114346  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||    
T  27114345 ccatcttcaacaaatatcttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagttttttg-aggggtgtcgatggtgtcatggtc 27114247  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27114246 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagaca 27114147  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||  |||||| ||||| || |||||||   || || |||||||||||||||||||||||| ||| |||| | ||| || |||||||| | |||||    
T  27114146 caaaaaaacacataatatctgatctggatttcgtattccgaaaatcactaacaatctggtccggaatatataattcagacaagaggtatttttgaaaatt 27114047  T
Q  449 tt 450  Q
    ||    
T  27114046 tt 27114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 52 - 489
Target Start/End: Complemental strand, 26279172 - 26278743
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||||    
T  26279172 agagtcattaatgtaggtttggacggttacaaccactaacacgttttcattgactgtactaatgacccaggacttgttttaggctataaataggcttcca 26279073  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  26279072 tcttcaacaaataccttcattcttcacttcacttcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcatt 26278975  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    ||||||| |||||| |||||||| |     | ||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||| ||||||| |     
T  26278974 gttgaccattcatatgaaccctgca-----agtgcattgcagcttgtgtggggttcatttaacggttaacagagacacttgacatcaaaaaaagacacaa 26278880  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||||||||||| |||||  ||| || | |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  26278879 aaaaacacataacatctggtccgaatttcgttttccggatatcactaacaatctggtccggattatataatccggaccaggggtattttag-aaatttta 26278781  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    ||||||||||||| ||| | || ||| |||||||||||    
T  26278780 cagggcgcgcgagaaggaaacagggtaggaaaagtaaa 26278743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 440
Target Start/End: Original strand, 38679446 - 38679839
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||| ||||||||||||||||   ||||||||| ||| |||| |||||||||||||  |||||||||||||||||||||||||||    
T  38679446 ttcagagccattaatgtggatttggacggttacaacaaccactaacacttttgcattgactgtattaatgacttaggacttgttttaggctataaatagg 38679545  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||| ||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  38679546 cttcaatcttcaacaaatatctacattcttcacttcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 38679644  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  38679645 gtcattgttgaccgttcataggaagcctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacaatgacccttgacatcaaagaaag 38679744  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    ||| | |||||||||||||||||||||||||||  ||||| || ||||||| |||||| |  ||||||||||  |||| |||| | |||||||||    
T  38679745 acacaaaaaattacataacatctggtccggattgttgtttccggaaatcacaaacaatataatccggattatacaatcgggacaaagggtatttt 38679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 49 - 378
Target Start/End: Complemental strand, 37012965 - 37012642
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||    
T  37012965 ttcagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtatgaatgacctagaacttgttttaggctataaataggctt 37012866  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||    
T  37012865 ccatcttcaacaaatactttcattcttcacttcacctcttttcttccattttcttcaaatg-ttttttagtttattaggggtgtcgatggtgtcatggtc 37012767  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||| ||     ||||||||| |||||||||| |||| ||||||||||||||    
T  37012766 attgttgaccgttcatagaaaccctgcaattgcaatgcattgtagcttgtgtggg-----tataacggtgaacagagacctttgaaatcaaagaaagaca 37012672  T
Q  349 tagaaaattacataacatctggtccggatt 378  Q
     |||||| ||||||||||||||||||||||    
T  37012671 cagaaaagtacataacatctggtccggatt 37012642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 37883562 - 37883130
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| || |||||| ||| ||||||||||| ||||||||||||||||||    
T  37883562 agagccattaatgtgggtttggacggttacaaccactaacatgttttcattgactatagtaatgacctaagacttgttttaagctataaataggcttcca 37883463  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |               |||||||| |  |||||||||||||||    
T  37883462 tcttcaacaaataccttcattcttcacttcacatcttttcttccattttcttcaaatg--tttttagttttttaggggtgttggaggtgtcatggtcatt 37883365  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||   ||  ||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |     
T  37883364 gttgaccgttcatatgaaccctgcaat---aa--cattgcaacttgtgtggggttcatataacggtcaactgagacctttgacatcaaagaaatacacaa 37883270  T
Q  352 aaaattacataacatctggtccggatt---tctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
    ||||  ||||| |||||||||||||||   | | |||||  |||||||||||||||||||||| ||||| |||||||||||| || |||||| | |||||    
T  37883269 aaaagcacataccatctggtccggatttaattttttttcagaaatcactaacaatctggtccgcattatataatccggaccatggttatttttgaaaatt 37883170  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| |||||  | ||||| ||||||||    
T  37883169 ttgcagggcgcgcgagaaggcaatagggtggaaaaagtaa 37883130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 8300857 - 8301149
Alignment:
Q  139 aaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatgg 238  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |               ||||||||||||||    
T  8300857 aaatagacttccatcttcaacaaatacctacattcttcacttcacatcttttcttacattttcttcaaatgtctttt---------aggggtgtcgatgg 8300947  T
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||    
T  8300948 tgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggtttatataacagtcaacaaagacccttgacatca 8301047  T
Q  339 aagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatt 438  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| | |||||||    
T  8301048 aagaaagacacagaaaattacataacatctggttcggatttctgttttcggaaatcactaacaatctgatccggattatataatccggacaaagggtatt 8301147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 52 - 469
Target Start/End: Original strand, 25977135 - 25977541
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| |||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  25977135 agagtcattaatgtaggtttggacgattacaaccactaacacgttttcattgactgtagtaatgacttaggacttgttttaggttataaataggcttcca 25977234  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||    ||||||||||||||||||||||||||||||||||||||||||| |               | |||||||  |||||||| |||||||    
T  25977235 tcttcaaca----ccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttctt--aagggtgtcagtggtgtcacggtcatt 25977328  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| ||||| || |||     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     
T  25977329 gttgaccgttcatatgaaccttgcaat-----tgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacacaa 25977423  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  |||||||||||| ||| ||||||  ||| ||   ||||||||||||||| | |||||||| ||||||  |||||||||||||| |||||||||     
T  25977424 aaaaccacataacatctgatcctgatttcgttttccgggtatcactaacaatctgctacggattatataatccaaaccaggggtatttttgtaaatttta 25977523  T
Q  452 cagggcgcgcgaggaggc 469  Q
    ||||||||||||| ||||    
T  25977524 cagggcgcgcgagaaggc 25977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 9715312 - 9715729
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||| | |||||| ||| ||||| ||||||||||||||||| ||||||    
T  9715312 agagtcattgatgtaggtttggacggttacaaccaccaacacgttttcattgactgcactaatgacctatgactttttttaggctataaatagacttcca 9715411  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |               || ||||||  ||||||||||||||||    
T  9715412 tcttcaacaaatagcttcattcttcacttcacctcttttcttccattttcttcaaatg--tttttaggtttttagaggtgtctgtggtgtcatggtcatt 9715509  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgt-agggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    |||||||||||||| |||||||| |||   ||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |    
T  9715510 gttgaccgttcatatgaaccctgcaat---aa--cattgcagcttgtgtgggggttcatataacggtcaacagagacccttgacatcaaagaaagacgca 9715604  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  |||||| |||||||||||              |||||||||||||||||||| ||||||| |||| |||||||||||||||||   |||| ||    
T  9715605 aaaaagcacataa-atctggtccgg--------------aaatcactaacaatctggtctggattatataattcggaccaggggtattttcaaaaatatt 9715689  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||||| |||||||| |||||||| ||||  ||||||||||    
T  9715690 gcaggacgcgcgagaaggcagcagggtgaaaaaagtaaaa 9715729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 140 - 488
Target Start/End: Original strand, 2606076 - 2606417
Alignment:
Q  140 aataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggt 239  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |               || ||||||| ||||    
T  2606076 aataggcttccatcttcaacaaataccttcattcttcacttcacatcttttcttccattttcttcaaatg--tttttagttttttagaggtgtcggtggt 2606173  T
Q  240 gtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaa 339  Q
    ||||||||||||||||| | |||||| |||||||| |||      |||||||||||||||| |||||||||||||  | |||||||||| ||||||||||    
T  2606174 gtcatggtcattgttgatcattcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataac-attaacagagaccattgacatcaa 2606267  T
Q  340 agaaagacatagaaaattacataacatctggtccggattt-ctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatt 438  Q
    ||||||||| | ||||  ||||||||||| |||| |||||  ||||   | ||||||||||||||| || || |||||| |||| |||||||||||||||    
T  2606268 agaaagacacaaaaaagcacataacatcttgtccagatttaatgttccggaaaatcactaacaatccggaccagattatataattcggaccaggggtatt 2606367  T
Q  439 ttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    || | |||||||| | |||||||||| |||||  | ||||||||||||||    
T  2606368 tttggaaattttggaaggcgcgcgagaaggcattaaggtgggaaaagtaa 2606417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 52 - 410
Target Start/End: Original strand, 11719938 - 11720288
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||| |||||| |||||||| |||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||||||| ||| ||    
T  11719938 agagccattaatgtaggtttgaacggttacgaccactaacacgttttcattgactgtactaatgacctaggacttattttaggccataaatagactttca 11720037  T
Q  152 tctttaacaaataccttcattc-ttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcat 250  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |               | |||||||| |||| ||||| || |    
T  11720038 tcttcaacaaataccttcattctttcacttcacctcttttctttcattttcttcaaatg-tttttagtttttttatgggtgtcggtggtatcatgatctt 11720136  T
Q  251 tgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    | |||||||||||||  |||| |  |||      |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||  |    
T  11720137 tattgaccgttcatataaaccatacaat-----agcattgcagcttgtgtggggttcatataatggtcaacagagactcttgacatcaaagaaagac--a 11720229  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtcc 410  Q
     ||||  |||||||||||| |||  |||| |||||||  ||| |||||||||||||||||    
T  11720230 aaaaaacacataacatctgatccaaattt-tgttttccgaaagcactaacaatctggtcc 11720288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 1711398 - 1711644
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  1711398 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttttgcgggggtcgtataacggtcaacagagacccttgaca 1711492  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | | |  |||||||||  | | |||  ||| ||||||||||||||||| ||||| |||||||||||||||||    
T  1711493 tcaaagaaagacacaaaatatt-catatcgtatttgtccggatta-tatattccaaaaacactaacaatctggtcctgattacgtaatccggaccagggg 1711590  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||||||||| ||| ||||| |||||||||||||||||    
T  1711591 tatttatgaaatttttgcagggcgcgtgagaaggcaacatggtgggaaaagtaa 1711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 488
Target Start/End: Original strand, 5343964 - 5344167
Alignment:
Q  284 tgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctg-gtccggatttctg 382  Q
    ||||||||||||| || |||| || |||||||||||||||||||||||||||||||||||||||| | || ||| |||| | | |  |||||||||  |     
T  5343964 tgcattgcagcttatgcaggggtcgtataacggtcaacagagacccttgacatcaaagaaagacacaaaatatt-catatcgtatttgtccggatta-ta 5344061  T
Q  383 ttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaa 482  Q
    | |||   || ||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||||||||||||| ||||| |||||||||||    
T  5344062 tattctggaaacactaacaatctggtccggattacgtaatccggaccaggggtatttatggaatttttgcagggcgcgcgagaaggcaacatggtgggaa 5344161  T
Q  483 aagtaa 488  Q
    ||||||    
T  5344162 aagtaa 5344167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 15858728 - 15858590
Alignment:
Q  350 agaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattt 449  Q
    |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||  |||||||| |||||||    
T  15858728 agaaaattacataacatctggttcgaatttctgttttcggaaatcactaacaatctaatccggattgtgtaatccggaccagatgtattttaataaattt 15858629  T
Q  450 tgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| ||| | |||||| | ||||| ||||||||||||||    
T  15858628 tgctgggtgtgcgaggggacagcagggtgggaaaagtaa 15858590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 15858880 - 15858801
Alignment:
Q  128 ttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  15858880 ttttaggctataaataggcttccatcttcaacaaataccttcattcttcacatcacctcttttcttacattttcttcaaa 15858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 29047356 - 29047450
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||| | || |||||||||||||||||| ||||| || ||||||||||||||    
T  29047356 cactagcaatctggtccggaatacgtaatccggaccaggggtatttttggaatttttgcagggcgcgcgagaaggcaacagggtgggaaaagtaa 29047450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 402 - 484
Target Start/End: Complemental strand, 37012655 - 37012573
Alignment:
Q  402 atctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||| |||||    
T  37012655 atctggtccggattatgcaatccggaccaggggtattttaataaattttgcagggcgcgcgaaaaggcagcaaggtgagaaaa 37012573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 456
Target Start/End: Original strand, 24856094 - 24856308
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||| ||||||||||||    
T  24856094 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacaaagacccttgaca 24856188  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||| ||||||| | || ||| |||| | |  | ||||||| || | | |||   || ||||||||||||||||||||||| |||||| ||||||| ||    
T  24856189 tcaaaaaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatctggtccggattacgtaatctggaccagtgg 24856286  T
Q  435 tattttagtaaattttgcaggg 456  Q
    |||||  | || ||||||||||    
T  24856287 tatttatggaatttttgcaggg 24856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 27495229 - 27495146
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttca 205  Q
    |||| |||| ||||||||||||| ||| |||||| ||||| |  |||||||||||||||||||||||||||| |||||||||||    
T  27495229 gactggtttaaggctataaatagactttcatcttcaacaattttcttcattcttcacttcacctcttttcttacattttcttca 27495146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 8299216 - 8299319
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| || |||||||| |||||||||||   ||| |||||||||| ||| ||||||||||||| ||| || ||||||||||||||||||||     
T  8299216 ttcagagtcattaatttgggtttgaacggttacaacaaccaccaacacgtttttattgactgtattaatgacctaagaattgttttaggctataaataga 8299315  T
Q  146 cttc 149  Q
    ||||    
T  8299316 cttc 8299319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 391 - 488
Target Start/End: Complemental strand, 13654782 - 13654685
Alignment:
Q  391 aatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| |  ||||||| |||||| ||||||||||||||||||||||||| ||  | || |||| |||||||| | ||||||||||||    
T  13654782 aatcactaacaatctgatatggattatataatccagaccaggggtattttagtaaattttacatagtgcacgagaaggcagcaggatgggaaaagtaa 13654685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 23252558 - 23252461
Alignment:
Q  106 tgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||| |||| || |||||||| |||||| |||||||||  ||| |||||| ||||||| |||||||||||||||| |||||||||||| | |||||||    
T  23252558 tgtaataattatttaggacttattttagactataaataaacttgcatcttaaacaaattccttcattcttcactttacctcttttcttacgttttctt 23252461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 6432592 - 6432698
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  |||| | ||||||||| |||||||||||||||||    
T  6432592 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcggggt-cgtataacggttaacagagacccttgaca 6432685  T
Q  336 tcaaagaaagaca 348  Q
    || ||||||||||    
T  6432686 tcgaagaaagaca 6432698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 32746794 - 32746687
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||| |||||||     |||| |||| ||   || || |||||||||||||||||||||||||||    
T  32746794 tggtgtcatggtcattgttgactgctcatacgacccctgcaattgca-----ttgccgcttatgcgagggtcgtataacggtcaacagagacccttgaca 32746700  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  32746699 tcaaagaaagaca 32746687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 32695099 - 32695017
Alignment:
Q  122 gacttgttttaggctataaataggcttc-catctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    ||||||||| ||| |||||||||||||  |||||| ||||||| |||||||| |||||||||||||||||||| | |||||||    
T  32695099 gacttgtttaaggttataaataggctttgcatcttcaacaaattccttcatttttcacttcacctcttttcttactttttctt 32695017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 38984274 - 38984209
Alignment:
Q  284 tgcattgcagcttgtgtagggt-tcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||| || ||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  38984274 tgcattgcagcttatgcagggggtcatataacggtcaacagagactcttgacatcaaagaaagaca 38984209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 22911851 - 22911931
Alignment:
Q  127 gttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||| ||||||| |||||| ||||||||| | ||||| ||||||||||||||  ||| ||||||||| |||||||||||||    
T  22911851 gtttaaggctatcaataggtttccatcttcatcaaattccttcattcttcaccacacttcttttcttacattttcttcaaa 22911931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 27948541 - 27948435
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||||||||| |||||| || || |  |||||||     ||||||||| ||| ||||| |||||| | |||||||||||| ||||||    
T  27948541 tggtgtcatggtcattgttgaccattcatatgacccatacaattgca-----ttgcagcttctgtggggtt-atataatgatcaacagagacctttgaca 27948448  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  27948447 tcaaagaaagaca 27948435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 27690485 - 27690584
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||| | ||| |||||||||  ||| |||||||||||| |||| |||||| ||||| | | ||||||||||||||| | ||||||||| |||||||||    
T  27690485 actgtagttatggtctaggactgatttaaggctataaatatgcttgcatcttcaacaatttcattcattcttcacttcccatcttttcttacattttctt 27690584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 489
Target Start/End: Original strand, 8551245 - 8551335
Alignment:
Q  399 acaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    ||||||||||| || |||| |||| |||| ||||| |||||| | || |||||||||||| || || |||||||| |||||||||||||||    
T  8551245 acaatctggtctggtttatataattcggatcagggatatttttgaaatttttgcagggcgtgcaagaaggcagcagggtgggaaaagtaaa 8551335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 428 - 490
Target Start/End: Original strand, 11720287 - 11720349
Alignment:
Q  428 ccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    |||||| |||||| ||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  11720287 ccagggatatttttgtaaattttgcagggcgcgcgaaaaggcagtagggtgggaaaagtaaaa 11720349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 15858778 - 15858730
Alignment:
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgca 287  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  15858778 tgtcatggtcatcgttgaccgttcataggaaccatgcaattgcaatgca 15858730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 23344821 - 23344909
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttca 177  Q
    ||||||||||  | ||||||| | |||||||||||||||||||| | |||||| ||| ||  ||||| ||||||| |||||||||||||    
T  23344821 aacacgttttattctactgtagttatgatctaggacttgttttaagttataaaaaggtttgtatcttcaacaaattccttcattcttca 23344909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 41616070 - 41616163
Alignment:
Q  112 aatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||||| |||||| ||||||||||||||||| ||||||  ||||| ||||  | |||||||| ||  ||||||||| |||||| |||||||||||||    
T  41616070 aatgacctaggatttgttttaggctataaaaaggcttggatcttcaacattttccttcattatt--cttcacctcctttcttacattttcttcaaa 41616163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 25976807 - 25976845
Alignment:
Q  12 agagagtgggagaagatggtggggtttggaaggctattt 50  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  25976807 agagagtgggagaggatggtggggtttggaaggctattt 25976845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 27948631 - 27948579
Alignment:
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    ||||| ||||| | |||||||||||||||||||||| |||||| |||||||||    
T  27948631 atcttcaacaatttccttcattcttcacttcacctcctttcttacattttctt 27948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 31471705 - 31471756
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgca 287  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||||| ||||    
T  31471705 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgcattgca 31471756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 32285582 - 32285511
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattctt 175  Q
    |||||| | |||||||||||  ||||| ||||||||||||| ||| |||||| |||||||  ||||||||||    
T  32285582 actgtagttatgatctaggatatgtttaaggctataaatagacttgcatcttcaacaaatttcttcattctt 32285511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 489
Target Start/End: Complemental strand, 38984165 - 38984071
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    ||||||||||||||| ||||  | |||||||||| || || |||||| | || |||||||||||||| ||| ||||| || |||||||||| ||||    
T  38984165 cactaacaatctggttcggaaaacgtaatccggatcaagg-tatttttggaatttttgcagggcgcgtgagaaggcaacagggtgggaaaattaaa 38984071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 6432743 - 6432836
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||| |||||||||| | | |||||  |||||||||| ||| | || ||||||||| |||||||| |||||  | ||||||||||||||    
T  6432743 cactaacaatttggtccggat-acgaaatccataccaggggtagttttgaaatttttgcaggacgcgcgagaaggcaagagggtgggaaaagtaa 6432836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 31471801 - 31471895
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||| ||||  |  |||| |||||||||| |||||  | || |||| || |||||||||| ||||||||  |||||||||||||    
T  31471801 cactaacaatctggttcggaaaacataattcggaccagggatatttgtggaattttttcaaggcgcgcgagaaggcagcagagtgggaaaagtaa 31471895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18809436 - 18809391
Alignment:
Q  5 gaggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    |||||| |||| |||||||| ||||||||| |||||||||||||||    
T  18809436 gaggagtagagggtgggagaggatggtgggctttggaaggctattt 18809391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 22911956 - 22912051
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    ||||||||||||||||||||| | ||||||  ||||||     |||||| || ||||||||| ||| ||| | ||||||||||||||||||||| |||||    
T  22911956 tggtgtcatggtcattgttgatctttcatat-aaccct-----tgcaattgctttgcagcttatgtgggggttatataacggtcaacagagacctttgac 22912049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 23252430 - 23252401
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  23252430 tggtgtcatggtcattgttgaccgttcata 23252401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 27495049 - 27495017
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaa 340  Q
    ||||||||||||||||||||| |||||||||||    
T  27495049 atataacggtcaacagagacctttgacatcaaa 27495017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 31471575 - 31471668
Alignment:
Q  112 aatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||||| ||| || ||||||||| ||||||| ||||||  ||||| ||||  | |||||||||||   |||||||| |||||| |||||||||||||    
T  31471575 aatgacctatgatttgttttagtctataaagaggcttggatcttcaacattttccttcattcttt--ttcacctcctttcttacattttcttcaaa 31471668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 38984424 - 38984355
Alignment:
Q  135 ctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||||| ||||||  ||||| ||||  | ||||||||||||  ||||||||||||||| ||||||||||||    
T  38984424 ctataaaaaggcttggatcttaaacattttccttcattcttc--ttcacctcttttcttacattttcttcaa 38984355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 40105246 - 40105683
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| ||||  ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  40105246 ttcagagtcattattgtgggtttggacggttgcaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctt 40105345  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
     |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||    
T  40105346 tcatcttcaacaaataccttcattcttcaattcacctcttttcttccattttcttcaaatgttttttagttttt--aggggtgtcgatggtgtcatggtc 40105443  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||  || |||||||||||||||||||||||    
T  40105444 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagtttgtgtggggttcatataacggtcaatcgaaacccttgacatcaaagaaagaca 40105543  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  40105544 cagaaaattacataacatctggtccggatttctgtttgcggaaataactaacaatctggtccgaattatgtaatccggaccaggggtattttaataaatt 40105643  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  40105644 ttgcagggcgcgcgaggaggcagcagggtggaaaaagtaa 40105683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 8239984 - 8240422
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||    
T  8239984 ttcagagccattattgtgggtttggacggttacaaccactaacacgttttcattaactgtattaataacataggacttgttttaggctataaataggctt 8240083  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |               ||||||||||||||||||||| ||    
T  8240084 ccatcttcaacaaataccttcattcttcacttcaccttttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatgatc 8240182  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8240183 attgttgaccgttcatatgaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacattaaagaaagaca 8240282  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  8240283 caaaaaattacataacatctggtccggatttctgtttcaggaaataactaacaatccggtccggattatgtaatccggaccagaaatattttagtaaatt 8240382  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| ||||||||||||||||||||| ||||| ||||||||    
T  8240383 ttgtagggcgcgcgaggaggcagcagggtggaaaaagtaa 8240422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 39318592 - 39319030
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  39318592 ttcagagccattattgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggctt 39318691  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |               |||||||||||||||||||| |||    
T  39318692 ccatcttcaacaaataccttcattattcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatagtc 39318790  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||| || ||||||||||||||||||||||| ||||| ||||||||||||||    
T  39318791 attgttgaccgttcataggaaccatgcaattgcaatgcattgcaacttttgtgggattcatataacggtcaacagagactcttgatatcaaagaaagaca 39318890  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  39318891 cagaaaattacataacatctggtccggatttctgttttcgaaaataactaacaatctggttcagattatgtaatccggaccaggggtattttaataaatt 39318990  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| || |||||| ||||| ||  |||||||||||||    
T  39318991 ttgcagagcacgcgagaaggcatcagagtgggaaaagtaa 39319030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 86 - 488
Target Start/End: Complemental strand, 32947183 - 32946781
Alignment:
Q  86 actaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacct 185  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  32947183 actaacacgttttcattgactgtattaatgacctaggacttgttttaggctataagtaggcttctatcttcaacaaataccttcattcttcacttcacct 32947084  T
Q  186 cttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatg 285  Q
    |||||||| ||||||||||||| |               |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  32947083 cttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaactctccaattgcaatg 32946985  T
Q  286 cattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccgga--tttctgt 383  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||  |||||||    
T  32946984 cattgcagcttgtgtggggttcatataacggtcaacagagacccttgagattaaagaaagacacagaaaattacataacatctggtccggatttttctgt 32946885  T
Q  384 tttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaa 483  Q
    || || ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||    
T  32946884 ttccggaaatcactaacaatctgatccggattatgtaatccgggtcaggggtattttagtaaattttgcagagcgcg-gaggaggcagcagggtggaaaa 32946786  T
Q  484 agtaa 488  Q
    |||||    
T  32946785 agtaa 32946781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 49 - 470
Target Start/End: Original strand, 35684012 - 35684431
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||||    
T  35684012 ttcagagccattattgtgggtttggacggttacaaccactaacacgttttcattgactgttttaatgacccagtacttgttttaggctataaataggctt 35684111  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| |               |||||| |||||||||||||||||    
T  35684112 ccatcttcaacaaataccttcattcttcacttcaccaattttcttccattttcttcaaatgttttttagtttttt-aggggtatcgatggtgtcatggtc 35684210  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||    
T  35684211 attgttgaccgttcataggaactctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttaacatcaaagaaaaaca 35684310  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||||||||| || ||| ||||| ||||| || ||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  35684311 caaaaaattacataacatttgttccagatttatgtttccg-aaaacactaacaatctgatccggattatgtaatccagaccagggatattttagtaaatt 35684409  T
Q  449 ttgcagggcgcgcgaggaggca 470  Q
    ||||||| |||  |||||||||    
T  35684410 ttgcaggacgcaggaggaggca 35684431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 49 - 420
Target Start/End: Original strand, 39260286 - 39260658
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccac---taacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| ||||||||||||||||||||||| ||   ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  39260286 ttcagagtcattaatgtgggtttggacggttacaacaaccattaacacgtttttattgactgtattaatgacctaggacttgttttaggctataaatagg 39260385  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||                 |||||||||||||||||||||    
T  39260386 cttctatcttcaacaaatacattcattcttcacttcacctcttttcttacattttcttcaaat-attttctagttttttaggggtgtcgatggtgtcatg 39260484  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  39260485 gtcattgttgaccgttcatagtaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaaa 39260584  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgta 420  Q
    ||| |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  39260585 acacagaaaattacataacatctggtccggatttctgtttccggaaa-cactaacaatctggtccggattatgta 39260658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 52 - 490
Target Start/End: Complemental strand, 32337948 - 32337514
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||  |||| ||||||||||||||||| |||||||||||||||||| | |||| |||||| |||||||||| |||||||||||||||||||||||    
T  32337948 agagccatcaatgtaggtttggacggttacaatcactaacacgttttcattgattgtactaatgacctaggacttggtttaggctataaataggcttcca 32337849  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  32337848 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcatt 32337751  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| |     
T  32337750 gttgaccgttcatatgaaccctgcaattgca--gcattgcagcttgtgtgaggttcatataacggtcaacagagactcttgacatcaaagaaagacacaa 32337653  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  |||||||||||||||||||||||| | | || | ||| ||||||||||| ||| |||||| ||||||| |||| ||||||||| | ||||||||    
T  32337652 aaaagcacataacatctggtccggatttctttgtccggatatcgctaacaatctgctccagattatataatccgaaccaagggtatttttggaaattttg 32337553  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    |||||| | |||| | |||||| ||||||||||||||||    
T  32337552 cagggcacacgagaaagcagcagggtgggaaaagtaaaa 32337514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 6347433 - 6347004
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||    
T  6347433 agagccattaatgtgggtttggacggttacaaccactaacacgttttcatttactgtactaatgacctaggacttgttttaggctataaacatgcttcca 6347334  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |                |||||||   ||||||||||||||||    
T  6347333 tcttcaacaaataccttcattcttcatttcacctcttttcttccattttcttcaaatgtttttagttttttt--ggggtgttagtggtgtcatggtcatt 6347236  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
     ||||| |||| || |||||||| |||   ||  ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |     
T  6347235 attgactgttcgtatgaaccctggaat---aa--cattgcaacttgtgtggggttcatataacggtcaacagaaacccttgacatcaaagaaagacacaa 6347141  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||   |||||||||||||||| |||||  |||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  6347140 aaaaacgcataacatctggtccgaatttcgtttttcggatatcactaacaatttgctccggattatgtaatccggaccaggggtattttagtaaattttg 6347041  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||| |||||||| ||| | ||||||||    
T  6347040 cagggcgcgcgagaaggcagcagggtagaaaaagtaa 6347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 43098545 - 43098973
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||    
T  43098545 agagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactataataatgacctaggacttgttttaggctataaataggcttcca 43098644  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  43098645 tcttcaacaaatacattcattcttcacttcacctcttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 43098742  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    ||| |||||||||| |||||||| |||      | |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |     
T  43098743 gtttaccgttcatatgaaccctgcaat-----agtattgcagcttgtgtggggttcatataacggtcaacagagactgttgacatcaaagaaagacacaa 43098837  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  |||||||||||||||| |||||   |||||| |||||||||||||||||||| ||||||| ||||||| ||| |||||||||| | ||||||||    
T  43098838 aaaagcacataacatctggtccagattt-aattttcggaaatcactaacaatctggtctggattatataatccgaaccgggggtatttttggaaattttg 43098936  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     |||| ||||||| |||||||| ||||||||||||||    
T  43098937 aagggtgcgcgagaaggcagcagggtgggaaaagtaa 43098973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 52 - 460
Target Start/End: Original strand, 23144107 - 23144508
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaa-tgatctaggacttgttttaggctataaataggcttcc 150  Q
    |||| |||| |||| |||||||||| ||||||||||||||| ||||||||| |||||| ||| ||| ||||||||||||||||| |||||||||||||||    
T  23144107 agagtcattaatgtaggtttggacgattacaaccactaacatgttttcattgactgtagtaaatgacctaggacttgttttaggttataaataggcttcc 23144206  T
Q  151 atctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcat 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||                 |||||||||| | |||||||||||||    
T  23144207 atcttcaacaaataccttcattcttcacttcacctcttttcttcctttttcttcaaa--tatttttggttttttaggggtgtcggttgtgtcatggtcat 23144304  T
Q  251 tgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    ||||||| ||||||| |||||||| |||      | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23144305 tgttgactgttcatatgaaccctgcaat-----agaattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacaca 23144399  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  |||||||||||| ||||||||||  |||||| ||| |||||||||||||||||||||||| |||||||||||| |||||| || | |||||||    
T  23144400 aaaaagcacataacatctgatccggatttcgtttttcg-aaaacactaacaatctggtccggattatataatccggaccaagggtatatttgaaaatttt 23144498  T
Q  451 gcagggcgcg 460  Q
    | ||| ||||    
T  23144499 ggaggacgcg 23144508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 69 - 490
Target Start/End: Original strand, 586428 - 586843
Alignment:
Q  69 tttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacctt 168  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  586428 tttggacggttacaaccactaacaagttttcattgactgtactaatgaactaagacttgttttaggctataaataggcttctatcttcaacaaatacctt 586527  T
Q  169 cattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcatagga 268  Q
    ||||||||||| |||||||||||||| |||||||||||| |               | |||||||| ||||| |||||||||||||||||||||||| ||    
T  586528 cattcttcactccacctcttttcttcaattttcttcaaatg--tttttagttttttaagggtgtcggtggtgccatggtcattgttgaccgttcatatga 586625  T
Q  269 accctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatct 368  Q
    |||||| |||     ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||  |||||||||||    
T  586626 accctgcaat-----tgcattgcagcttgtgtggggttcatataacggtcaacaaagacccttgacatcaaagaaagacacaaaaaaacacataacatct 586720  T
Q  369 ggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggagg 468  Q
    ||||||||||||| | |    | ||||||||||||||| | |||||||| |||| | |||||  |||||||| | ||||||||||||||| ||||| |      
T  586721 ggtccggatttctttgtctagatatcactaacaatctgcttcggattatataattcagaccacaggtatttttggaaattttgcagggcgtgcgagaata 586820  T
Q  469 cagcatggt-gggaaaagtaaaa 490  Q
    ||||| ||| |||||||||||||    
T  586821 cagcagggtggggaaaagtaaaa 586843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 52 - 490
Target Start/End: Complemental strand, 627512 - 627079
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||  |||| | |||||||||||||||||||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||| |    
T  627512 agagccatcaatgtagctttggacggttacaaccactaacaagttttcattgactgtactaatgaactaagacttgttttaggctataaataggcttcta 627413  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| |               | |||||||| ||||| ||||||||||    
T  627412 tcttcaacaaataccttcattcttcactccacctcttttcttcaattttcttcaaatg--tttttagttttttaagggtgtcggtggtgccatggtcatt 627315  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca-ta 350  Q
    |||||||||||||| |||||||| |||     ||||||| ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||  |    
T  627314 gttgaccgttcatatgaaccctgcaat-----tgcattgaagcttgtgtggggttcatataacggtcagcaaagacccttgacatcaaagaaagacacaa 627220  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  |||||||||||||||||||||||| | |    | ||||||||||||||| | |||||||| |||| | |||||   ||||||| | |||||||    
T  627219 aaaaaacacataacatctggtccggatttctttgtctagatatcactaacaatctgcttcggattatataattcagaccacaagtatttttggaaatttt 627120  T
Q  451 gcagggcgcgcgaggaggcagcatggt-gggaaaagtaaaa 490  Q
    ||||||| |||||| | |||||| ||| |||||||||||||    
T  627119 gcagggcacgcgagaatgcagcagggtggggaaaagtaaaa 627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 152 - 488
Target Start/End: Original strand, 42131968 - 42132300
Alignment:
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| |               |||||||||||||||||||||||||||    
T  42131968 tcttcaacaaataccttcattcttcacttcacctcttttcgtacattttcttcaaatgttttctatttttt--aggggtgtcgatggtgtcatggtcatt 42132065  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||| |     
T  42132066 gttgaccgttcatatgaaccctgcaattgcaatgcattgcagcttgtgtcgggttcatataacggccaacagagacccttgacatcaaagttagacacaa 42132165  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||||||||||||||| |||||||||||||||| || ||| ||||||||||||  |||  |||| ||||| |||| |||||||||||  | || |||||    
T  42132166 aaaattacataacatct-gtccggatttctgtttccggaaa-cactaacaatctaatccaaattacgtaattcggatcaggggtatttatgaaatttttg 42132263  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||| ||| |||| |||||||| ||||| ||||||||    
T  42132264 caggacgcacgagaaggcagcagggtggaaaaagtaa 42132300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 52 - 338
Target Start/End: Complemental strand, 37098471 - 37098194
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||  | ||||||||||||||||||||||| |||| ||    
T  37098471 agagccattaatgtgggtttagacggttacaaccactaacacgtttttattgactgtattaatgacatgggacttgttttaggctataaataagctttca 37098372  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  37098371 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatg----tttagttttttaggggtgtcggtggtgtcatggtcatt 37098276  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    |||||||||||||| |||||||  |||   ||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  37098275 gttgaccgttcatatgaaccctacaat---aa--cattgcagcttgtgtggggttcatataacggtcaacagagacccttgaaatca 37098194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 20091517 - 20091270
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||||||||| |||||||| |||      |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||    
T  20091517 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgtagcttgtgtggggttcatataacagtcaacagagaccattgaca 20091423  T
Q  336 tcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggt 435  Q
    ||||||||||||| | ||||   |||||||||||||||||||||   ||| || ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  20091422 tcaaagaaagacacaaaaaaacccataacatctggtccggatttaattttccggaaatcactaacaatctggtccggattacgtaatccagaccaggggt 20091323  T
Q  436 attttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| | ||||||||||||||||||||| |||||||| |||| |||||||||    
T  20091322 atttttggaaattttgcagggcgcgcgagaaggcagcagggtgtgaaaagtaa 20091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 225 - 488
Target Start/End: Complemental strand, 29544365 - 29544109
Alignment:
Q  225 aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacaga 324  Q
    |||||||| | |||| ||||||||||||||||||||||||| |||||||| |||      |||||||||||||||| | |||||||||||||||||||||    
T  29544365 aggggtgttggtggtatcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggagttcatataacggtcaacaga 29544271  T
Q  325 gacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatcc 424  Q
    |||||||||||||||||||| ||| | ||||  ||||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||| |||| |    
T  29544270 gacccttgacatcaaagaaacacacaaaaaagcacataacatctggtccggattt-agtttccggaaa-cactaacaatctggtccggattatataattc 29544173  T
Q  425 ggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| | |||||||||||||||| |||| |||||||| ||||||||||||||    
T  29544172 ggaccaggggtatttttggaaattttgcagggcgcacgagaaggcagcagggtgggaaaagtaa 29544109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 167 - 464
Target Start/End: Original strand, 13546304 - 13546594
Alignment:
Q  167 ttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcatag 266  Q
    ||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||||||||||||||||     
T  13546304 ttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcattgttgaccgttcatat 13546401  T
Q  267 gaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacat 366  Q
    |||||||  ||| |||     ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||  |||||||||    
T  13546402 gaacccttcaatagca-----ttgcagcctgtgtggggttcatataacggtcaacagagactcttgacatcaaagaaagacacaaaaaaccacataacat 13546496  T
Q  367 ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    |||||||||||||   ||| || |||||||||||||||||||| | ||||| ||||||| |||||||||||||| | |||||||||||||||||||||    
T  13546497 ctggtccggatttaattttccggaaatcactaacaatctggtctgtattatataatccgaaccaggggtatttttggaaattttgcagggcgcgcgag 13546594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 167 - 464
Target Start/End: Complemental strand, 13678169 - 13677879
Alignment:
Q  167 ttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcatag 266  Q
    ||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||||||||||||||||     
T  13678169 ttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcattgttgaccgttcatat 13678072  T
Q  267 gaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacat 366  Q
    |||||||  ||| |||     ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||  |||||||||    
T  13678071 gaacccttcaatagca-----ttgcagcctgtgtggggttcatataacggtcaacagagactcttgacatcaaagaaagacacaaaaaaccacataacat 13677977  T
Q  367 ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    |||||||||||||   ||| || |||||||||||||||||||| | ||||| ||||||| |||||||||||||| | |||||||||||||||||||||    
T  13677976 ctggtccggatttaattttccggaaatcactaacaatctggtctgtattatataatccgaaccaggggtatttttggaaattttgcagggcgcgcgag 13677879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 49 - 269
Target Start/End: Complemental strand, 11076369 - 11076150
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| ||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| |||    
T  11076369 ttcagagtcattattgtgggtttggacggttacaaccactaacacgtttttattgactgtattaatgacctaggacttgttttagactataaatagactt 11076270  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    |||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||| ||    
T  11076269 ccattttcaacaaataccttaattcttcacttcacctcttttcttccattttcttcaaatg-ttttttagtttttcaggggtgtcgatggtgtcatgatc 11076171  T
Q  249 attgttgaccgttcataggaa 269  Q
    |||||||||||||||||||||    
T  11076170 attgttgaccgttcataggaa 11076150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 52 - 206
Target Start/End: Original strand, 31701047 - 31701198
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||| ||| ||||||||||   |||||| ||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  31701047 agagctattaatgtgggttt---cggttataaccaataacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaataggcttcca 31701143  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31701144 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 31701198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 20091998 - 20091867
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||| || ||| ||||||  ||||||||||||||||||||| |||||||||||    
T  20091998 agagccattaatgtcggtttggacagttacaaccactaacacgttttcattgaccgtagtaatgacataggacttgttttaggctatatataggcttcca 20091899  T
Q  152 tctttaacaaataccttcattcttcacttcac 183  Q
    |||| |||||||||||||||||||||||||||    
T  20091898 tcttcaacaaataccttcattcttcacttcac 20091867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 11908 - 12154
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||| |||||||     ||||||||| ||  || |||  ||||||||||||| ||||||||||||    
T  11908 tggtgtcatggtcattgttgactgctcatatgacccctgcaattgca-----ttgcagcttatgcgggattcgcataacggtcaacatagacccttgaca 12002  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | | |  |||||||||     || || ||| ||||||||||||||||||||||| ||||||| |||||||||    
T  12003 tcaaagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggaaa-cactaacaatctggtccggattacgtaatccagaccagggg 12100  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||||||||||||| ||||| || ||||||||||||||    
T  12101 tatttatggaatttttgcagggcgcgcgagaaggcaacagggtgggaaaagtaa 12154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 37098199 - 37098101
Alignment:
Q  390 aaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||||||| | ||||||||||||||||||||| ||||| || ||||||||||||||    
T  37098199 aaatcacaaacaatctggtccggattatataatccagaccatgggtatttttggaaattttgcagggcgcgcgagaaggcaacagggtgggaaaagtaa 37098101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 31701237 - 31701332
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  31701237 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacatagaccattgaca 31701331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 28284527 - 28284449
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttc 191  Q
    |||||||||||| ||||||||||| |||||||| || |||||| ||||||| |||||||||||||||||||||||||||    
T  28284527 atgatctaggacatgttttaggctgtaaataggtttgcatcttcaacaaattccttcattcttcacttcacctcttttc 28284449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 4258893 - 4259001
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggt-tcatataacggtcaacagagacccttgac 334  Q
    |||||||||||||||||||||| ||||||| || || || ||||||      ||||||||||||| |||  | |||||||||||||||||||||||||||    
T  4258893 tggtgtcatggtcattgttgactgttcatatgacccatgcaattgcg-----ttgcagcttgtgtggggggttatataacggtcaacagagacccttgac 4258987  T
Q  335 atcaaagaaagaca 348  Q
    ||||||||||||||    
T  4258988 atcaaagaaagaca 4259001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 24830708 - 24830602
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||  |||     ||||||||||||| || |||| || ||||||||||||||||||||| |||||    
T  24830708 tggtgtcatggtcattgttgactgctcatacgaccccttcaat-----tgcattgcagcttatgcaggggtcgtataacggtcaacagagaccc-tgaca 24830615  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  24830614 tcaaagaaagaca 24830602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 11457100 - 11457022
Alignment:
Q  115 gatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    |||||| ||||||||||||| |||||| ||||||||||||| |||||||  |||| || ||||||| ||||||||||||    
T  11457100 gatctatgacttgttttaggttataaacaggcttccatcttcaacaaatttcttcctttttcacttaacctcttttctt 11457022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 4258769 - 4258854
Alignment:
Q  121 ggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||||||||| |||||||||| ||| ||  ||||| ||||| | || ||||||||||||||||||| |||||| ||||||||||||    
T  4258769 ggacttgtttaaggctataaaaaggtttggatcttcaacaatttccgtcattcttcacttcacctcatttcttacattttcttcaa 4258854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 23421132 - 23421240
Alignment:
Q  238 gtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggt-tcatataacggtcaacagagacccttgacat 336  Q
    |||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| |   |||  || |||||||||||| |||||||||| ||||    
T  23421132 gtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatacggggggtcgtataacggtcaatagagacccttaacat 23421226  T
Q  337 caaagaaagacata 350  Q
    ||||||||||||||    
T  23421227 caaagaaagacata 23421240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 13546259 - 13546309
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatt 102  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||||||||    
T  13546259 agagccattaatgtgtgtttggacggttacaaccactaacagcttttcatt 13546309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 13678214 - 13678164
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatt 102  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||||||||    
T  13678214 agagccattaatgtgtgtttggacggttacaaccactaacagcttttcatt 13678164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 42190501 - 42190400
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||| ||| ||  ||| || |||||||||||| | |||| |||||||    
T  42190501 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcaacttatgcgggggtcgtataacggtcaataaagactcttgaca 42190407  T
Q  336 tcaaaga 342  Q
    |||||||    
T  42190406 tcaaaga 42190400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 38225247 - 38225296
Alignment:
Q  158 acaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||| |||||||||||||||||| |||||||||| |||||| ||||||    
T  38225247 acaaattccttcattcttcacttcatctcttttctttcattttattcaaa 38225296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 26911705 - 26911741
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26911705 atataacggtcaacagagacctttgacatcaaagaaa 26911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 38225390 - 38225422
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaa 340  Q
    |||||||||||||||||||||||||||||||||    
T  38225390 atataacggtcaacagagacccttgacatcaaa 38225422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 42131939 - 42131971
Alignment:
Q  156 taacaaataccttcattcttcacttcacctctt 188  Q
    |||||||||||||||||||||||||||||||||    
T  42131939 taacaaataccttcattcttcacttcacctctt 42131971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 21269172 - 21269275
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||||||||||||||||  | ||||| |||||  ||   ||||||||| ||  ||| | ||||||||||||||||| |   ||||||    
T  21269172 tggtgtcatggtcattgttgaccgttcatataacccctgcaattg--at---ttgcagcttatgcgggggttatataacggtcaacagaaatatttgaca 21269266  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  21269267 tcaaagaaa 21269275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 11456903 - 11456869
Alignment:
Q  310 ataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||| |||||||||||||||    
T  11456903 ataacggtcaacagagacctttgacatcaaagaaa 11456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 23421283 - 23421377
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||||  | || ||||| ||||  |||||| |||||  ||||||  ||||||||    
T  23421283 cactaacaatctggtccagattacgtaatttggaccaggggtatttatggaatttttgtaggggacgcgagaaggcaatatggtgaaaaaagtaa 23421377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 38621601 - 38621691
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    ||||||||||||| |||| || ||||||||| | ||| || || | |||||  ||||||| |||||||||||||||| ||| | |||||||    
T  38621601 atgatctaggactcgtttaagactataaataagtttctatgttcatcaaatttcttcattattcacttcacctctttccttactttttctt 38621691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 488
Target Start/End: Original strand, 39260656 - 39260709
Alignment:
Q  434 gtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||| ||||||||||||| |||||||||||| |||| | ||||||||||||    
T  39260656 gtattttaataaattttgcagg-cgcgcgaggaggtagcaggatgggaaaagtaa 39260709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 24830830 - 24830746
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | ||||||||||||  ||  |||| |||||| |||||||||||||    
T  24830830 gacttgttttaggctataaaaaggcttagatcttcaacattttccttcattcttc-tttaccctcctttcttacattttcttcaaa 24830746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 42190629 - 42190539
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    ||||| |||||||||||||||||||| ||||||  ||| | ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  42190629 atctatgacttgttttaggctataaaaaggcttatatcgtcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 42190539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 28284274 - 28284210
Alignment:
Q  396 ctaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcg 460  Q
    |||||||||||||   |||||| ||||||| ||||| |||||||| || | ||||||||||||||    
T  28284274 ctaacaatctggtttagattatataatccgaaccagaggtatttttgtcatttttgcagggcgcg 28284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 294; Significance: 1e-165; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 31271490 - 31271053
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  31271490 ttcagagccattaatgtgggtttggacgattacaaccacttacacgttttcattaactgtattaatgacctatgacttgttttaggctataaataggctt 31271391  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| |               |||||| |||||||||||||||||    
T  31271390 ccatcttcaacaaatactttcatttttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtatcgatggtgtcatggtc 31271292  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31271291 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagggactcttgacatcaaagaaagaca 31271192  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31271191 cagaaaaacacataacatctggtccggatttctgttttcggaaatcactaacaatctggtccggattatgtaatccgaaccagggttattttagtaaatt 31271092  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  31271091 ttgcagggcgcgcgagaaggcagca-ggtgggaaaagtaa 31271053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 303898 - 303457
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggtta---caaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| ||||  |||||||||||||   ||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  303898 ttcagagtcattaatgtaagtttggacggttataacaaccaccaacacgttttcattgattgtattaatgacctaggacttgttttaggctataaatagg 303799  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||||||||||||||    
T  303798 cttccattttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 303700  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||    
T  303699 gtcattgttgaccgttcataggaactctgcaattgcaatgcattgcagcttgtgcggggttcatataacggtcaacagagaccattgacattaaagaaag 303600  T
Q  346 acatagaaaattaca-taacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagta 444  Q
    ||| | ||||||||| ||||||||  ||||||||||||||| || ||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  303599 acacataaaattacattaacatctaatccggatttctgtttccggaaa-cactaacaatctggtccggattacataatccggaccaggggtattttagta 303501  T
Q  445 aattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||  |||||||||| ||||| ||||||||||||||    
T  303500 aattttgcaggatgcgcgaggagacagcagggtgggaaaagtaa 303457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 31722865 - 31723303
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| ||||||||||||| |||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  31722865 ttcagagccattaatgtgggtttggatggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagg 31722964  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||| |               || ||||||||||||||||||    
T  31722965 cttccatcttcaacaaagaccttcattcttcacttcatctcttttcttacattttcttcaaatgttttttagtttttt-agcggtgtcgatggtgtcatg 31723063  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||| |||||||  ||||||||||| ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |    
T  31723064 gtcattgttgaccgttcataagaaccctacaattgcaatgcgttgcagcttgtgtggagttcatataacggttaacagagacccttgacatcaaagaatg 31723163  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| | ||||||||||||   || ||||| |||| ||||| || |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  31723164 acacataaaattacataa---cttgtccgaatttatgtttccgaaaatcactgacaatctgatccggattatgtaatccgaaccaggggtattttagtaa 31723260  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| |||  | ||||| ||| |||||||||| ||||||||    
T  31723261 attttgtaggatgggcgagaagggagcatggtggaaaaagtaa 31723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 57 - 488
Target Start/End: Complemental strand, 439167 - 438748
Alignment:
Q  57 cattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatc 153  Q
    |||| |||||||||||||||||||||||   ||||||||||||||| || ||| || |||||| ||||||||||||||||||||||||||| ||||||||    
T  439167 cattaatgtgggtttggacggttacaacaaccactaacacgttttcgttgactatactaatgacctaggacttgttttaggctataaatagacttccatc 439068  T
Q  154 tttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgt 253  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               ||| ||||||||||||||||||||||| |    
T  439067 ttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatg-ttttttagttttttaggagtgtcgatggtgtcatggtcattat 438969  T
Q  254 tgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaa 353  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||              ||||||||||| | ||    
T  438968 tgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggtttatataacggtcaacag--------------aaagaaagacacaaaa 438883  T
Q  354 aattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgca 453  Q
    ||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||  | |||||||||||| |||| ||  ||||||||||||||| ||    
T  438882 aattagataacatctggtccagatttctgtttccataaatcactaacaatctgatctagtttatgtaatccgaaccaaggacattttagtaaatttttca 438783  T
Q  454 gggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| ||||||| |||||||||||||||||||||||    
T  438782 gggtgcgcgagaaggcagcatggtgggaaaagtaa 438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 49 - 416
Target Start/End: Complemental strand, 16395459 - 16395093
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||| ||||||| ||||||||||||| |||||||||   |||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  16395459 ttcaaagccattaatgtgggtttggatggttacaacaaccactaacacgttttcattgactatattaatgacataggacttgttttaggctataaatagg 16395360  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| |               |||||||||||||||||||||    
T  16395359 cttccatcgtcaacaaatactttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 16395261  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | | |||||||||    
T  16395260 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatatagcggtcaacagagaccctttatagcaaagaaag 16395161  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggatta 416  Q
    ||  ||||||||||| ||||||||||||| ||||||| ||||  ||| |||||||||||| ||| ||||||    
T  16395160 ac--agaaaattacaaaacatctggtccgaatttctg-tttccaaaaacactaacaatctagtctggatta 16395093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 31318671 - 31318517
Alignment:
Q  53 gagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccat 152  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |||    
T  31318671 gagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaataggctttcat 31318572  T
Q  153 ctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31318571 cttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 31318517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 9304950 - 9305108
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  9304950 ttcagagccattattgtgggttttgacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctt 9305049  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
      | ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  9305050 ttaccttaaacaaataccttcattcatcacttcacctcttttattccattttcttcaaa 9305108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 225 - 484
Target Start/End: Original strand, 9305134 - 9305388
Alignment:
Q  225 aggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacag 323  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||| |      ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9305134 aggggtatcggtggtgtcatggttattgttgaccgttcatatgaatc------ttgcaatagcattgcagcttgtgtggggttcatataacggtcaacag 9305227  T
Q  324 agacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatc 423  Q
    ||||||||||||||||||||||||| | ||||  |||||||||||| |||| ||||   ||| ||   ||||||||||||||||||| |||||| |||||    
T  9305228 agacccttgacatcaaagaaagacacaaaaaagcacataacatctgatccgtatttaattttccggttatcactaacaatctggtccagattatataatc 9305327  T
Q  424 cggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    || |||||||||||||| | ||||||| ||||||| ||||| ||| |||||||||| ||||    
T  9305328 cgaaccaggggtatttttggaaattttacagggcgtgcgagaaggtagcatggtggaaaaa 9305388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 236 - 485
Target Start/End: Complemental strand, 31318478 - 31318235
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||| ||||||||||||||||||||  ||||||| ||| |||     ||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  31318478 tggtgtcatagtcattgttgaccgttcatataaaccctgcaatagca-----ttgcagcttgtgtggggttcatataacggtcaacggagacc-ttgaca 31318385  T
Q  336 tcaaagaaagacatagaaaattacataacatctggt-ccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | ||||   |||||||| |||| ||  ||||   ||| |  ||||||||||||||||||||||||||| ||||||||||||| |||    
T  31318384 tcaaagaaagacaca-aaaagcgcataacatttggttccatatttaattttccaaaaatcactaacaatctggtccggattacgtaatccggaccatggg 31318286  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaag 485  Q
    |||||| | |||||||||||||| |||||| ||||||||||||||||||||    
T  31318285 tattttcggaaattttgcagggcacgcgagaaggcagcatggtgggaaaag 31318235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 20818653 - 20818516
Alignment:
Q  69 tttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacctt 168  Q
    ||||||||||||  ||||| |||||||||||||| | |||| | ||||  || ||||| |||||| |||||||||  |||||||||| ||||||| ||||    
T  20818653 tttggacggttagcaccacaaacacgttttcattgattgtacttatgacgtatgacttattttagactataaatatacttccatcttcaacaaattcctt 20818554  T
Q  169 cattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  20818553 cattctttacttcacctcttttcttacattttcttcaa 20818516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 488
Target Start/End: Complemental strand, 34949482 - 34949239
Alignment:
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    ||||||| ||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||| ||||||| |||    
T  34949482 tgtcatgatcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagatccttgacgtca 34949388  T
Q  339 aagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtat 437  Q
    |||||||||| | || ||| |||| | | |  |||||||||     || || ||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  34949387 aagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggaaa-cactaacaatctggttcggattacgtaatccggaccaggggtat 34949290  T
Q  438 tttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||  | || ||||||||||| |||||| ||||| || ||||||||||||||    
T  34949289 ttatggaacttttgcagggcacgcgagaaggcaacagggtgggaaaagtaa 34949239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 408
Target Start/End: Original strand, 12305267 - 12305430
Alignment:
Q  239 tgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatca 338  Q
    ||||||||||||||||||||||||||  || ||||| |||     ||||||||||||| ||| ||||| |||||| |||||||||| |||||||||||||    
T  12305267 tgtcatggtcattgttgaccgttcattcgacccctgcaat-----tgcattgcagcttatgtggggtt-atataatggtcaacagatacccttgacatca 12305360  T
Q  339 aagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggt 408  Q
    |||||||||| | |||||| |||| | |  | ||||||||||  |||| || |||||||||||||||||||    
T  12305361 aagaaagacaca-aaaatttcatatcgtatttgtccggattttagtttccggaaatcactaacaatctggt 12305430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 484
Target Start/End: Complemental strand, 480271 - 480030
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||| |||||| ||||| || | ||| |||||||     |||||||||     ||| || |||||| ||||||||||||||||||||    
T  480271 tggtgtcatggtcattgctgaccgctcatacgacctctgcaattgca-----ttgcagcttacacgggggtcgtataactgtcaacagagacccttgaca 480177  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||  |||| ||| |  |||||||||  | | |||  ||| |||||| ||| |||||||||||||||||||||||| |||||    
T  480176 tcaaagaaagacacaaaatatc-catatcatatttgtccggatta-tatattccgaaaacactaataatatggtccggattatgtaatccggactagggg 480079  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||  | || ||||||| |||||||||| ||||| |||||||||||||    
T  480078 tatttatggaatttttgca-ggcgcgcgagaaggcaacatggtgggaaaa 480030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 29436051 - 29435805
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||  |||     ||||||||||||| ||  |||||  ||||||||||||||||||| |||||||    
T  29436051 tggtgtcatggtcattgttgaccgctcatacgacccctacaat-----tgcattgcagcttatgcggggtttgtataacggtcaacagagactcttgaca 29435957  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| ||||   |  | || |||| || | | |||   || ||||||||||||||||| ||||| |||||||||| ||||||    
T  29435956 tcaaagaaagacacaaaatatt-catattgtatttgttcgga-ttatatattccagaaacactaacaatctggtccagattacgtaatccggatcagggg 29435859  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||| ||||||||| ||||| || |||| |||||||||    
T  29435858 tatttatgaaatttttgcagagcgcgcgagaaggcaacagggtgagaaaagtaa 29435805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 17519939 - 17519837
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||| | |||||||| |||||||||||||||||||||| | || ||| || || |||| ||| |||||||||||||| |||||| ||| | |||||||    
T  17519939 actgtagttatgatctatgacttgttttaggctataaatatgtttgcatgttcaagaaattcctccattcttcacttcatctctttccttactttttctt 17519840  T
Q  204 caa 206  Q
    |||    
T  17519839 caa 17519837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 13036845 - 13036738
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||     ||||||||||||| ||  ||| || ||||| |||||||||||||| ||||||    
T  13036845 tggtgtcatggtcattgttgaccgctcatacgacccctgcaat-----tgcattgcagcttatgcgggggtcgtataatggtcaacagagaccattgaca 13036751  T
Q  336 tcaaagaaagaca 348  Q
    | ||| |||||||    
T  13036750 tgaaaaaaagaca 13036738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 6837251 - 6837350
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||| | |||||||||||||  ||| || |||||||||||  |  ||||| || || | ||||||||||||||||||||||||||||| |||||||||    
T  6837251 actgtagttatgatctaggactgatttaagactataaatagggctggatcttcaataatttccttcattcttcacttcacctcttttcttacattttctt 6837350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 13036693 - 13036603
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||  | || ||||||| |||||||||| |||||  | ||||||||||    
T  13036693 cactaacaatctggtccggaatacgtaatccagaccaagggtatttatgaaatttttgcatggcgcgcgagaaggcaataaggtgggaaaa 13036603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 28546949 - 28546865
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccatt 198  Q
    ||||| |||||||  |||||||||||||||||||||  ||||| ||||| | |||| ||||||||||||||||| |||||| ||||    
T  28546949 atgatttaggactgattttaggctataaataggcttgaatcttcaacaatttcctt-attcttcacttcacctcctttcttacatt 28546865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 439490 - 439445
Alignment:
Q  5 gaggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||    
T  439490 gaggaggagagggtgggagaggatggtggggtttggaaggctattt 439445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 480393 - 480339
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttc 176  Q
    |||||||||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  480393 gacttgttttaggctataaaaaggcttgaatctttaacattttccttcattcttc 480339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 6837446 - 6837482
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  6837446 atataacggtcaacagagacctttgccatcaaagaaa 6837482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 15911919 - 15911486
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  15911919 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacattttcattgactgtattaatgacctaggacttgttttaggctataaatagg 15911820  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  15911819 cttccatcttcaacaaataccttgattcttcacttcacctcttttcttacattttcttcaaatgtttttt---------aggggtgtcgatggtgtcatg 15911729  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  15911728 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttggcatcaaagaaag 15911629  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||| |||||||||| | ||| |||  |||||||||||    
T  15911628 acacagaaaattacataacatctggtctggatttctgtttccggaaatcactaacaatctgatccgaattatgtaattcagacaaggtatattttagtaa 15911529  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||    
T  15911528 attttgcagggtgcgcgagaaggcagcagggtgggaaaagtaa 15911486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 13278831 - 13278398
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  13278831 agagccattaatgtggggttggacggttacaaccactaacacgttttcattgactgtattaatgacaaaggacttgttttaggctataaataggcttcca 13278732  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  13278731 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcatt 13278634  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  13278633 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagaccattgacatcaaagaaagacacaa 13278539  T
Q  352 aaaattaca----taacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaat 447  Q
    ||||  |||    ||||||||||||||||||||  |||||| | |||||||||||||| ||||| ||||| ||||||||||||| |||||||| ||||||    
T  13278538 aaaaacacataattaacatctggtccggatttcgtttttcggatatcactaacaatctagtccgaattatataatccggaccagaggtatttttgtaaat 13278439  T
Q  448 tttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||| ||||||||||||| || ||||| ||||| ||||||||    
T  13278438 tttacagggcgcgcgagaagacagcagggtggaaaaagtaa 13278398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 107 - 484
Target Start/End: Complemental strand, 38207567 - 38207197
Alignment:
Q  107 gtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38207567 gtattaatgacctaggacttgttttaggctataaatatgcttacatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaa 38207468  T
Q  207 acgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggtt 306  Q
    | |               ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  38207467 atgttttttagtttttt-aggggtgtcgatgatgtcatggtcattgttgaccgttcataggaatcctgcaattgcaatgcattgcagcttgtgtggggtt 38207369  T
Q  307 catataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctg 406  Q
    ||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  38207368 catataacgatcaacagagaccgttgacatcaaagaaagatacagaaaattacataacatctggtccggatttctgtttccgaaaatcactaacaatctg 38207269  T
Q  407 gtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
     ||||||||||||||||| |||      |||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  38207268 atccggattatgtaatccagac------tattttagtaaattttgcaggatgcgcgaggaggcagcagggtgggaaaa 38207197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 45117218 - 45116788
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||    
T  45117218 ttcagagccgttaatgtggatttggacggttacaaccactaacacgttttcattgactctattaatgacctaagacttgttttaggctataaataggctt 45117119  T
Q  149 ccatcttt-------aacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgt 241  Q
    |||||||        ||||||||| ||||||||||||||||||||||||||||||||||||||||| |               |||||||||||||||||    
T  45117118 ccatcttccatcttcaacaaatactttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgt 45117020  T
Q  242 catggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaag 341  Q
    ||||              |||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  45117019 catg--------------ttcataagaaccctgcaattgcaatgcattgcagcttgtgtggggttaatataacggtcaacaaagacccttgacatcaaag 45116934  T
Q  342 aaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttta 441  Q
    ||||||| | ||||||||||||||||| ||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  45116933 aaagacacataaaattacataacatctagtccggatttctgcttccggaaatcactaacaatctggttcggattatgtaatccggacca-ggttatttta 45116835  T
Q  442 gtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  45116834 gtaaattttgcagggcgcgcgagaagacagcatggtgggaaaagtaa 45116788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 7942742 - 7943171
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||||| |||||| ||| || ||||||||||||||| |||||||| || ||||||    
T  7942742 agagccattaatgtaggtttggacggttacaaccactaacatgttttcattgactgtagtaaggacctaggacttgttttatgctataaacagacttcca 7942841  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |               |||| ||||| ||||||||||||||||    
T  7942842 tcttcaacaaataccttcattgttcacttcacctcttttcttccattttcttcaaatgtttttaatttttt--agggttgtcggtggtgtcatggtcatt 7942939  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||| ||||||| |||||||| |||||||     ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  7942940 gttgactgttcatatgaaccctgcaattgca-----ttgcagcttgtgtggggttcatataacggtcaacagagaccattgacatcaaagaaagacacaa 7943034  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  || ||| ||||| ||||||||||  ||| || |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  7943035 aaaagcacgtaatatctgatccggatttcgttttccggaaatcactaacaatctagtccggattatgtaaacaggaccaggggtattttagtaaattttg 7943134  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||||  ||||||| |||||||| ||||||||||||||||    
T  7943135 cagg--gcgcgagaaggcagcacggtgggaaaagtaaaa 7943171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 49 - 368
Target Start/End: Complemental strand, 44760233 - 44759915
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  44760233 ttcagagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataagctt 44760134  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| || | ||||||||||| ||||| |||||||||||||| ||||||||||||| |               ||||||||||||||||||||| ||    
T  44760133 ccatcttcaagatataccttcattattcacatcacctcttttcttacattttcttcaaatg-ttttttagttttttaggggtgtcgatggtgtcatgatc 44760035  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44760034 attgttgaccgttcataggagccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgatatcaaagaaagaca 44759935  T
Q  349 tagaaaattacataacatct 368  Q
     |||||||||||||| ||||    
T  44759934 cagaaaattacataatatct 44759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 52 - 374
Target Start/End: Original strand, 17137702 - 17138030
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaata----g 144  Q
    ||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    |    
T  17137702 agagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataaacag 17137801  T
Q  145 gcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcat 244  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||| |||||||||||    
T  17137802 gcttctatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgttttttagtttttt-aggggtgttgatggtgtcat 17137900  T
Q  245 ggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||| |||    
T  17137901 ggtcattgttgacagttcataggaaccctgcaattgcaatgcattgcagcttgtgtgggattcatataactgtcaacacagacccttgacatcaaataaa 17138000  T
Q  345 gacatagaaaattacataacatctggtccg 374  Q
    |||| |||||||||||||||||||||||||    
T  17138001 gacacagaaaattacataacatctggtccg 17138030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 49 - 378
Target Start/End: Original strand, 30490674 - 30491005
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  30490674 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggccataaatagg 30490773  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    ||| |||||| ||||||||||| |||||||||| ||| |||||||||| |||||| |||||| |               |||||||||||||||| ||||    
T  30490774 ctttcatcttcaacaaatacctacattcttcacctcagctcttttcttacatttttttcaaatgttttttagtttttt-aggggtgtcgatggtgccatg 30490872  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30490873 gtcattgttgaccgttcataggaacactgcaattgcaatgcattgcaacttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaag 30490972  T
Q  346 acatagaaaattacataacatctggtccggatt 378  Q
    ||| ||||||||||||||||| | |||||||||    
T  30490973 acacagaaaattacataacattttgtccggatt 30491005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 56 - 489
Target Start/End: Complemental strand, 18137722 - 18137298
Alignment:
Q  56 ccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctt 155  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||| | |||| |||||| ||||||||| |||||||||||||||||||||  |||||    
T  18137722 ccattaatgtaggttgggacggttacaaccactaacacgttttcattgattgtactaatgacctaggacttattttaggctataaataggcttttatctt 18137623  T
Q  156 taacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttg 255  Q
     |||||||||||||||||||||||||| || ||||||||||||||||||||| |               |||||||||| ||||||||||||||||||||    
T  18137622 caacaaataccttcattcttcacttcatcttttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcattgttg 18137525  T
Q  256 accgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaa 355  Q
    |||||||||| |||||||| |||     ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| || | ||||    
T  18137524 accgttcatatgaaccctgcaat-----tgcattgcagcttgtgtggggttcatataaaggtcaacagagacccctgacatcaaagaaaggcacaaaaaa 18137430  T
Q  356 ttacataac-atctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcag 454  Q
      ||||||| || ||||||| |||||  ||| ||    ||||||||||||| ||||||||||| ||||||| |||||||||||||| | ||||||||||     
T  18137429 gcacataacaatatggtccgaatttcgttttccg---gtcactaacaatcttgtccggattatataatccgaaccaggggtatttttggaaattttgcaa 18137333  T
Q  455 ggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    |||||||||| |||||||| |||||||||||||||    
T  18137332 ggcgcgcgagaaggcagcagggtgggaaaagtaaa 18137298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 52 - 490
Target Start/End: Original strand, 31994077 - 31994507
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||||    
T  31994077 agagccattaatgtaggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaataggtttcca 31994176  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    | || |||||||| |||||||| ||||||||||||||||||||||||||||||||| |               |||| || || ||||||||||||||||    
T  31994177 tattcaacaaatatcttcattcatcacttcacctcttttcttccattttcttcaaatg--tttttatttttttagggttgccggtggtgtcatggtcatt 31994274  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| ||||| || |||      ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||| |     
T  31994275 gttgaccgttcatatgaaccatgcaat-----agcattgcagtttgtgtggggttcatataacggtcaacaaagacccttaacatcaaagaaagacacaa 31994369  T
Q  352 aaaattacataacatctggtccggatttctgttttc-gcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
    ||||  ||||||||||||||||  ||||| |||||| | ||| || ||||||||||||||||||||| |||||| |||| | ||||||||||| ||| ||    
T  31994370 aaaagcacataacatctggtccatatttc-gttttctggaaagca-taacaatctggtccggattatataatccagacctgaggtattttagtgaatatt 31994467  T
Q  451 gcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    |||||||||||||| |||||||| ||| | ||||||||||    
T  31994468 gcagggcgcgcgagaaggcagcagggtagaaaaagtaaaa 31994507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 52 - 314
Target Start/End: Complemental strand, 6404253 - 6403992
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||    
T  6404253 agagccattaatgcgggtttggacggttacaaccactaacacgttttcgttgaccgtattaatgacctaggacttgttttaggctataaataggcttcca 6404154  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |               |||||||||||||||||||||||||||    
T  6404153 tcttcaacaaataccttcattcttcacatcacctcttttcttacattttcttcaaatg-ttttttagttatttaggggtgtcgatggtgtcatggtcatt 6404055  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataac 314  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  6404054 gttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataac 6403992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 49 - 346
Target Start/End: Complemental strand, 17309100 - 17308798
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  17309100 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttcggctataaatagg 17309001  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtg----tcgatggtgt 241  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||  |               |||||||    ||||||||||    
T  17309000 cttccatc-ttcacaaataccttcattcttcacttcacctcttttcttacattttcttcaattg-ttttttagttttttaggggtgtcgatcgatggtgt 17308903  T
Q  242 catggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaag 341  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17308902 catggtcattgttgaccgttcataggaaccctgcaattgcaatgaattgcagcttgtgtggggttcatataacggtaaacagagacccttgacatcaaag 17308803  T
Q  342 aaaga 346  Q
    |||||    
T  17308802 aaaga 17308798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 62 - 488
Target Start/End: Original strand, 1209941 - 1210364
Alignment:
Q  62 atgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||    
T  1209941 atgtgggtttggacggttacaaccactaacacgttttcattgactttattaatgacctaggacttgttttaagctataaataggcttccatcttcgacaa 1210040  T
Q  162 ataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgtt 261  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||                 |||||||| | ||||||||||||||||||||||||||    
T  1210041 atacctgcattcttcacttcacatcttttcttccattttcttcaaa--tatttttagttttttaggggtgttggtggtgtcatggtcattgttgaccgtt 1210138  T
Q  262 cataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacat 361  Q
    |||| |||||||| |||   |||  ||||||||||||||  |||| ||||||| ||||| ||| ||| ||||||||||||||||||| ||||||  ||||    
T  1210139 catatgaaccctgcaat---aat--attgcagcttgtgtgaggttgatataacagtcaatagaaacctttgacatcaaagaaagacacagaaaagcacat 1210233  T
Q  362 aacatctggtccggatttctgtttt----cgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggc 457  Q
    ||||||||||| | |||| | ||||    |  ||||||||||||||||| | || |||||||| ||| |||||| | ||||||| |||||||| |||||     
T  1210234 aacatctggtctgaatttattttttcttccagaaatcactaacaatctgatacgaattatgtattcccgaccagagctattttaataaattttacagggt 1210333  T
Q  458 gcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||  || |||||||| ||||| ||||||||    
T  1210334 gcgtaagaaggcagcagggtggaaaaagtaa 1210364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 265 - 488
Target Start/End: Original strand, 38707426 - 38707649
Alignment:
Q  265 aggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataac 364  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38707426 aggaaccctgcaattgcaatgcattgcagcttatgtggggttcatataacggtcaacagagacccttgacatcaaagaaagacacagaaaattacataac 38707525  T
Q  365 atctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    |||| ||||| |||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  38707526 atcttgtccgaatttatgtttccggaaatcactaacaatctgatccggattatgtaatccggaccatgggtattttagtaaatttttcagggtgcgcgag 38707625  T
Q  465 gaggcagcatggtgggaaaagtaa 488  Q
     ||||||||  |||||||||||||    
T  38707626 aaggcagcagagtgggaaaagtaa 38707649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 307 - 488
Target Start/End: Complemental strand, 6402767 - 6402586
Alignment:
Q  307 catataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctg 406  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| || || ||||||||||| ||    
T  6402767 catataacggtcaacagagactcttgacatcaaagaaagacacataaaattacataacatctggtcctgatttctgtttccggaagtcactaacaatatg 6402668  T
Q  407 gtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
     ||   ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  6402667 ttcttaattatgtaatccgaaccagggatattttagtaaattttgcagggtgcgcgaggaggaggcatggtgggaaaagtaa 6402586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 49 - 270
Target Start/End: Original strand, 38703581 - 38703803
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||    
T  38703581 ttcagagtcattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttcttttaggctataaat-gg 38703679  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  38703680 cttccatcttcaacaaatacctttattcttcacttcacctcttttcttacattttcttcaaatg-tttttcagttttttaggggtgtcgatggtgtcatg 38703778  T
Q  246 gtcattgttgaccgttcataggaac 270  Q
    || ||||||||||||||||||||||    
T  38703779 gtaattgttgaccgttcataggaac 38703803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 354 - 484
Target Start/End: Complemental strand, 17304728 - 17304598
Alignment:
Q  354 aattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgca 453  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||| |||||||| ||||||| | |||||||||    
T  17304728 aattacgtaacatctggtccggatttctgttttcggaaatcactaacaatctggttcaaattatgtaatccagaccagggttattttaattaattttgca 17304629  T
Q  454 gggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    ||||||||||| |||||||| ||||| ||||    
T  17304628 gggcgcgcgagaaggcagcagggtggaaaaa 17304598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 381
Target Start/End: Complemental strand, 1114717 - 1114576
Alignment:
Q  237 ggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacat 336  Q
    ||||||||||||||||||||||||||||| |||||||| |||     | ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1114717 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----ttcattgcagcttgtgtggggttcatataacggtcaacaaagacccttgacat 1114623  T
Q  337 caaaga--aagacatagaaaattacataacatctggtccggatttct 381  Q
     ||| |  |||||| | ||||  ||||||||||||||||||||||||    
T  1114622 aaaaaaagaagacacaaaaaagcacataacatctggtccggatttct 1114576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 21485295 - 21485412
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    |||||||||| ||| | |||| | |||| |||||||||||||||||||||||||| |||| ||| || ||||||| | ||||||||||||||||||||||    
T  21485295 aacacgtttttattgattgtacttatgacctaggacttgttttaggctataaataagctttcatattcaacaaattctttcattcttcacttcacctctt 21485394  T
Q  189 ttcttccattttcttcaa 206  Q
    ||||| ||||||||||||    
T  21485395 ttcttacattttcttcaa 21485412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 365 - 485
Target Start/End: Complemental strand, 44754130 - 44754010
Alignment:
Q  365 atctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgag 464  Q
    ||||||||| ||||||| ||| || ||||||||||||||||| |||| || ||||||||||||||||   ||||||||||||||||| ||||  ||||||    
T  44754130 atctggtccagatttctttttccgaaaatcactaacaatctgttccgaatcatgtaatccggaccagaaatattttagtaaattttgtagggttcgcgag 44754031  T
Q  465 gaggcagcatggtgggaaaag 485  Q
    ||||||||| ||| |||||||    
T  44754030 gaggcagcagggtaggaaaag 44754010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 33946013 - 33945914
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||| | ||||||||||||||||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||||| |||||||| | |||||||    
T  33946013 actgtagttatgatctaggacttgttttaggctatatataggtttgcatcttcaacaaattccttcattcttcacttcaccacttttcttactttttctt 33945914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 489
Target Start/End: Complemental strand, 34906290 - 34906045
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||| | || ||||| |||||||     ||||||||| ||  |||| | ||||||||| ||||| |||||||||||    
T  34906290 tggtgtcatggtcattgttgaccgctcacacgacccctgcaattgca-----ttgcagcttatgcggggt-cgtataacggttaacagtgacccttgaca 34906197  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| |  ||||| |||| | | || ||||||||||   ||| || ||| ||||||||||||||| ||||  | ||||||||||||||| |    
T  34906196 tcaaagaaagacaca--aaatttcatatcgtatgcgtccggattttattttccggaaa-cactaacaatctggttcggaaaaggtaatccggaccaggag 34906100  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    |||||| | |  ||||||||||| |||||| ||||||  || |||||||||||||    
T  34906099 tatttttggattttttgcagggcacgcgagaaggcagtttgatgggaaaagtaaa 34906045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 37127944 - 37128046
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||||| || || ||||||||||||||||||||||||| |||| ||| |||||||||| | ||||||||||||||||||| ||||||| | |||||||    
T  37127944 actgtatttatcatataggacttgttttaggctataaataagcttgcatttttaacaaattctttcattcttcacttcacctattttcttactttttctt 37128043  T
Q  204 caa 206  Q
    |||    
T  37128044 caa 37128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 1114811 - 1114722
Alignment:
Q  86 actaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattctt 175  Q
    ||||| ||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  1114811 actaatacgttttcattgactatactaatgacctaggacttgttttaagctataaataggctttcatcttcaacaaataccttcattctt 1114722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 5464564 - 5464809
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||| |||||||     ||||||||| ||  |||| | |||||||||||||| ||||||||||||    
T  5464564 tggtgtcatggtcattgttgactgctcatacgacccctgcaattgca-----ttgcagcttatgcggggt-cgtataacggtcaacaaagacccttgaca 5464657  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | ||||||| || | | |||   || |||||||||| |||||| |||||  ||||||||||||||||    
T  5464658 tcaaagaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatttggtccagattacataatccggaccagggg 5464755  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || |||||||| ||||||||| |||||  | ||||||||||||||    
T  5464756 tatttatgaaatttttgcagagcgcgcgagaaggcaataaggtgggaaaagtaa 5464809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 484
Target Start/End: Complemental strand, 43333769 - 43333528
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||| ||||||||||||||||||| ||||| || | ||| |||||||     ||||||||| ||  | || |||||||||||||||||||||||||||||    
T  43333769 tggtatcatggtcattgttgaccgctcatacgacctctgcaattgca-----ttgcagcttatgcggagt-catataacggtcaacagagacccttgaca 43333676  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| ||||   | |  |||||||||     || || ||| |||||||||||||| |||||||| ||||||||||||||| |    
T  43333675 tcaaagaaagacacaaaatatt-catattgtatttgtccggattatatattccggaaa-cactaacaatctggcccggattacgtaatccggaccaggag 43333578  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    |||||  | || ||||||||| |||||||| ||||| || ||||||||||    
T  43333577 tatttatggaatttttgcaggacgcgcgagaaggcaacaaggtgggaaaa 43333528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 5939259 - 5939366
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| || | || || |||||||||||||||| ||||||||||    
T  5939259 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcaagggtcgtataacggtcaacagaaacccttgaca 5939353  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  5939354 tcaaagaaagaca 5939366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 17138041 - 17138105
Alignment:
Q  424 cggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  17138041 cggaccaggggtattttagtaaattttatagggcgcgcgaggaggcagcagggtgggaaaagtaa 17138105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 18963299 - 18963192
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||||||||| ||||||  | ||||| |||||||     ||||||||| |||  || | ||||||||||||||||||||||||||||    
T  18963299 tggtgtcatggtcattgttgaccattcatacaacccctgcaattgca-----ttgcagcttatgtgaggattatataacggtcaacagagacccttgaca 18963205  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  18963204 tcaaagaaagaca 18963192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 24168461 - 24168355
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||||||||| || | ||| |||||||     ||||||||| ||  |||| | |||||||||||||||||||||||||||    
T  24168461 tggtgtcatggtcattgttgaccgttcatacgacctctgcaattgca-----ttgcagcttatgcggggt-cgtataacggtcaacagagacccttgaca 24168368  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  24168367 tcaaagaaagaca 24168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 34948436 - 34948329
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||| ||| ||  ||| || |||||||||||||||||||||||||||    
T  34948436 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcaacttatgcgggggtcgtataacggtcaacagagacccttgaca 34948342  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  34948341 tcaaagaaagaca 34948329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 21649744 - 21649821
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    ||||||||||||||| ||||||||||||| |||||||||| | |||||  |||||||||||||||||||| |||||||    
T  21649744 atctaggacttgtttaaggctataaatagtcttccatcttcatcaaatttcttcattcttcacttcaccttttttctt 21649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 16739565 - 16739673
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagaccc-ttgac 334  Q
    ||||||||||||||||||||||| |||||| || | ||| |||     ||||||||||||| ||  ||| || ||||||||||||||||||||| |||||    
T  16739565 tggtgtcatggtcattgttgaccattcatacgacctctgcaat-----tgcattgcagcttatgcgggggtcgtataacggtcaacagagaccctttgac 16739659  T
Q  335 atcaaagaaagaca 348  Q
    ||||||||||||||    
T  16739660 atcaaagaaagaca 16739673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 15113566 - 15113630
Alignment:
Q  284 tgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||| ||  ||| || ||||||||||||||||||||||||||||||||||||||||    
T  15113566 tgcattgcagcttatgcgggggtcgtataacggtcaacagagacccttgacatcaaagaaagaca 15113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 45526268 - 45526161
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||| ||||| ||  | | || ||||||||||||||||||||||||||     
T  45526268 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgtagcttatgcggaggtcgtataacggtcaacagagacccttgact 45526174  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  45526173 tcaaagaaagaca 45526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 34948568 - 34948476
Alignment:
Q  112 aatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||| ||| |||||||||||||||||||| ||||||  ||||||||||  | |||||||||||  ||||||||| |||||| ||||||||||||    
T  34948568 aatgacctatgacttgttttaggctataaaaaggcttgaatctttaacattttccttcattctt--cttcacctcctttcttacattttcttcaa 34948476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 41961647 - 41961542
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||  ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||| |||||||| |||    
T  41961647 tggtgtcatggtcattgttgacctctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacaaagacccttaaca 41961553  T
Q  336 tcaaagaaaga 346  Q
    |||||||||||    
T  41961552 tcaaagaaaga 41961542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 17230306 - 17230199
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    ||||||||||||||| ||||||||||||||  ||||     | |||||| |||||||||||| ||| ||| | |||| |||||||||||||||| |||||    
T  17230306 tggtgtcatggtcatcgttgaccgttcatac-aacc-----actgcaatagcattgcagcttatgtgggggttatatgacggtcaacagagacctttgac 17230213  T
Q  335 atcaaagaaagaca 348  Q
    ||||||||||||||    
T  17230212 atcaaagaaagaca 17230199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 16739457 - 16739548
Alignment:
Q  112 aatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||| |||||||||||||||||||||||| ||||||  ||||| ||||  | |||| |||||||   |||||||||||||| ||||||||||||    
T  16739457 aatgacctaggacttgttttaggctataaaaaggcttggatcttcaacattttcctttattcttc---tcacctcttttcttacattttcttcaa 16739548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 24168583 - 24168499
Alignment:
Q  123 acttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||||| ||| ||| || | ||||| |||| | ||||||||| | |||||||||| |||||||||||||    
T  24168583 acttgttttaggctataaatagacttgcatgttcaccaaattcctttactcttcacttaagctcttttctttcattttcttcaaa 24168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 16252545 - 16252791
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||||||||| || || || |||| ||     ||||||||| ||| ||| | ||||||||||||||| ||||| ||||||    
T  16252545 tggtgtcatggtcattgttgaccgttcatacgagccttgcaattaca-----ttgcagcttatgtgggggttatataacggtcaacaaagaccattgaca 16252639  T
Q  336 tcaaagaaagacatagaaaattacataac---atctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagg 432  Q
    | ||| ||| | | | |||| | |||| |   || |  ||| |||||  ||||||| ||| ||||||||||||||| || |  ||  | ||||||||||     
T  16252640 taaaaaaaaaagacaaaaaaattcatatcggaatat--tccagattttagttttcggaaagcactaacaatctggttcgaaaaataaattccggaccaga 16252737  T
Q  433 ggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||| | || ||||||| |||||| ||  |||||||| ||||||||||||||    
T  16252738 ggtatttttgaaatttttgcaaggcgcgtga--aggcagcagggtgggaaaagtaa 16252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 18963410 - 18963339
Alignment:
Q  132 aggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    |||||||||| ||||||  ||||| ||||| | |||||||||||||||||||||| |||||| |||||||||    
T  18963410 aggctataaaaaggcttggatcttcaacaatttccttcattcttcacttcacctcctttcttacattttctt 18963339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 38208475 - 38208410
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggtt---acaaccactaacacgttttcatttactgtatt 111  Q
    |||||||||||| ||||||||||||||||||   ||||||||||||||||||||||| || |||||    
T  38208475 ttcagagccattaatgtgggtttggacggttgcaacaaccactaacacgttttcattgaccgtatt 38208410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 34906421 - 34906329
Alignment:
Q  112 aatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||| |||||||||||| ||||||||||| |||| |  ||||| ||||  | |||||||||||  ||||||||| |||||| ||||||||||||    
T  34906421 aatgacctaggacttgttctaggctataaaaaggcatgaatcttcaacattttccttcattctt--cttcacctcctttcttacattttcttcaa 34906329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 21650006 - 21650069
Alignment:
Q  396 ctaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgc 459  Q
    ||||||||||||| | |||||| ||||||| ||||| |||||||| || | |||||||||||||    
T  21650006 ctaacaatctggttcagattatataatccgaaccagaggtatttttgtcatttttgcagggcgc 21650069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 488
Target Start/End: Complemental strand, 24167158 - 24167095
Alignment:
Q  425 ggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| | || ||||||||| |||| ||| ||||||||  |||||||||||||    
T  24167158 ggaccaggggtatttttgaaatttttgcaggacgcgtgagaaggcagcagagtgggaaaagtaa 24167095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 43333891 - 43333807
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||||||||  |  ||||||||||  ||||| |||| |||||| |||||||||||||    
T  43333891 gacttgttttaggctataaaaaggcttggatctttaacatttttcttcattctt--cttcatcctcctttcttacattttcttcaaa 43333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 15257143 - 15257260
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    ||||||||||  || |||||| | |||| ||| ||||  ||| |||||||||| || |||  ||||| || || |  ||||||||||||||||||||| |    
T  15257143 aacacgttttatttgactgtacttatgacctatgactgatttaaggctataaaaagacttggatcttcaataattttcttcattcttcacttcacctcct 15257242  T
Q  189 ttcttccattttcttcaa 206  Q
    ||||| |||||| |||||    
T  15257243 ttcttacattttgttcaa 15257260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 16414271 - 16414242
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcata 265  Q
    ||||||||||||||||||||||||||||||    
T  16414271 tggtgtcatggtcattgttgaccgttcata 16414242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 1114555 - 1114495
Alignment:
Q  430 aggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||||||||||| | |||||||| |||||||||||| ||| || | |||||||||| |||||    
T  1114555 aggggtatttttggaaattttgtagggcgcgcgagaaggtagtagggtgggaaaaataaaa 1114495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 15113395 - 15113484
Alignment:
Q  116 atctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaa 206  Q
    ||||| |||||||||||||||||||| ||| ||  ||||| ||||  | |||||||||||  ||||| |||| |||||| ||||||||||||    
T  15113395 atctatgacttgttttaggctataaaaaggtttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaa 15113484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 454
Target Start/End: Complemental strand, 33945735 - 33945671
Alignment:
Q  390 aaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcag 454  Q
    ||||| ||||||||||||| || ||||| ||||||| |||| ||||||||| || | ||||||||    
T  33945735 aaatcgctaacaatctggttcgaattatataatccgaaccatgggtatttttgtcatttttgcag 33945671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 278; Significance: 1e-155; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 44496626 - 44496189
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  44496626 ttcaaagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggctt 44496527  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
     |||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |               ||||||||||||||||||||||||    
T  44496526 tcatcttcaacaaatactttcattcttcactccacctattttcttccattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatggtc 44496428  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  44496427 attgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgt-gtgttcatataacggtcaacagagacccttgacaacaaagaaagaca 44496329  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||  |||| |||||||||| ||||||| ||||||    
T  44496328 cataaaattacataacatctggtctggatttctgtttccggaaatcactaacaatctggtccggattacataattcggaccagggttattttaataaatt 44496229  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  44496228 ttgcagggcgcgcgagaaggcagcatagtgggaaaagtaa 44496189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 49 - 484
Target Start/End: Complemental strand, 29961538 - 29961104
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||  || ||||| ||||||||||||||||| |||    
T  29961538 ttcagagccattaatgtgggtttgaacggttacaaccactaacacgttttcattgattgtattaatgacttaagacttattttaggctataaatagactt 29961439  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||               ||||||||||||||||||||||||    
T  29961438 ccatcttcaacaaataccttcattcttcacttcacatcttttcttacattttcttcaaacggtttttagtttttc-aggggtgtcgatggtgtcatggtc 29961340  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29961339 attgttgaccgttaataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacgatcaacagagacccttgacatcaaagaaagaca 29961240  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     ||||||  |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29961239 aagaaaaacacataacatctggtccagatttctgtttccggaaatcactaacaatctggtccggattatgtaatccggactaggggtattttagtaaatt 29961140  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
    | ||| || ||||||| |||||||| ||||||||||    
T  29961139 tcgcatggtgcgcgagaaggcagcagggtgggaaaa 29961104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 14587334 - 14587778
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  14587334 ttcagagccatttatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacttaggacttgttttaggctataaatagg 14587433  T
Q  146 c---ttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtc 242  Q
    |   ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||                 |||||||| |||||||||    
T  14587434 cggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaat-attttttagttttttaggggtgttgatggtgtc 14587532  T
Q  243 atggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaaga 342  Q
    ||| ||||||||| |||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14587533 atgatcattgttggccgttcatagaaaccctacaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaaga 14587632  T
Q  343 aagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttag 442  Q
    |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  14587633 aagacacagaaaattacataacatctggtccggatttctgtttccggaaatcactaacaatctgatccggattatgtaatccggaccatgggtattttag 14587732  T
Q  443 taaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  14587733 taaattttgcagggtgcgtgagaaggcagcagggtgggaaaagtaa 14587778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 37952441 - 37952005
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  37952441 ttcagagtcattaatgtgggtttggaccgttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaaaaggctt 37952342  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||| |               |||||||| |||| ||||||||||    
T  37952341 ccatcttcaacaaataccttcattcttcacttcacctcttttcttatattttcttcaaatggtttttagtttttt-aggggtgttgatgttgtcatggtc 37952243  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37952242 attgttgaccgttcataagaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgacatcaaagaaagaca 37952143  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||   |||||||||||||||    
T  37952142 cagaaaattacataatatctggtccagatttctgttttcggaaatcactaacaatctgattcggattatgtaatccgaacca-atgtattttagtaaatt 37952044  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||| || |||| |||||||| ||| ||||||||||    
T  37952043 ttgcagggtgcacgagaaggcagcagggt-ggaaaagtaa 37952005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 42882587 - 42883024
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    ||||||||||||  |||||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  42882587 ttcagagccattattgtgggtttggatggttacaaccactaacacattttcattgactgtattaatgacctaggacttgttttaggctataaataggctt 42882686  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||| |               ||||||||||||||||| ||||||    
T  42882687 ccatcttcaacaaatatcttcattcttcacatcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgttatggtc 42882785  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |    
T  42882786 attgatgaccgttcatag-aaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtaaccagagacccttgacatcaaagaaagata 42882884  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatt 448  Q
     | ||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  42882885 aaaaaaattacataacatctggtccgaatttctgtttccgaaaataactaacaatctggtccagattatgtgatccgaaacaggggtattttagtaaatt 42882984  T
Q  449 ttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  42882985 ttgcaggacgcgcgaggaggcagcaaggtgggaaaagtaa 42883024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 49 - 488
Target Start/End: Original strand, 3517572 - 3518010
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||   |||| |||||| ||||||||||||||||||||     
T  3517572 ttcagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgta---atgacctaggagttgttttaggctataaataga 3517668  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||  ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  3517669 cttttatcttcaacaaataccttcattcttcacttcacctcttttcttacattttcttcaaatgttttttagtttttt-aggggtgtcgatggtgtcatg 3517767  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||||||||| |||||||| ||||  ||||||||||||||||    
T  3517768 gtcattgttgaccgttcatatgaaccctgcaattgcaatgcattgcagcttgtgtgaggttcatataatggtcaacaaagacatttgacatcaaagaaag 3517867  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  3517868 acacagaaaattacataacatctggtccgaatttctgtttccggaaatcactaacaatctgatccggattatgtgatccggaccaggagtattttagtaa 3517967  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||    
T  3517968 attttgcagggtgcgcgagaaggcagcagggtgggaaaagtaa 3518010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 49 - 473
Target Start/End: Original strand, 12700533 - 12700963
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccac---taacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| ||||| |||||||| |||||||||||   |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12700533 ttcagagccattaatgtgcgtttggacagttacaaccaccactaacacattttcattgactgtattaatgatctaggacttgttttaggctataaatagg 12700632  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||| |               |||||||||| ||||||||||    
T  12700633 cttccatcttcaacaaatatcttcattcttcacttgacctcttttcttacattttcttcaaatgttttttagttttta-aggggtgtcggtggtgtcatg 12700731  T
Q  246 gtcatt----gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaag 341  Q
    ||||||    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  12700732 gtcattaattgttgaccgttcataggaaccatgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacccttgatatcaaag 12700831  T
Q  342 aaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttta 441  Q
    ||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||||||||   || |||||||||||||| ||||| | |||||||    
T  12700832 aaagacacaaaaaattacataacatctggtccggatttctgtttccggaaatcactaacaatctaacccagattatgtaatccgaaccagagatatttta 12700931  T
Q  442 gtaaattttgcagggcgcgcgaggaggcagca 473  Q
    |||||||||||||||| |||||||||||||||    
T  12700932 gtaaattttgcagggcacgcgaggaggcagca 12700963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 49 - 488
Target Start/End: Complemental strand, 33801507 - 33801065
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttaca---accactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    ||||||| |||| ||||||||||||||| |||||   |||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||||||||    
T  33801507 ttcagagtcattaatgtgggtttggacgattacagcaaccactaacacgttttcattgactgtaataatgacttaggacttgttttaggctataaatagg 33801408  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||| |                ||||||||||||||||||||    
T  33801407 cttccatcttcaaaaaatacctacattcttcacttcacctcttttcttacattttcttcaaatgtttttttagttttttgggggtgtcgatggtgtcatg 33801308  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  33801307 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacgatcaacagagacccttgacatcaaagaaag 33801208  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| |||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||||||||||  ||||||||| | ||||||||| || |    
T  33801207 acacagaaaattacataatatctggtccgaatttctgtttccggaaatcactaacaatctgatccggattatacaatccggacaaagggtattttggtca 33801108  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |  |  |||| |||||||| |||||| | ||||||||||||||    
T  33801107 aaatcacaggacgcgcgagaaggcagtagggtgggaaaagtaa 33801065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 104 - 488
Target Start/End: Original strand, 44757583 - 44757965
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttctt 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  44757583 actgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacattttctt 44757682  T
Q  204 caaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagg 303  Q
    |||| |                ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  44757683 caaatgttttctagttttttc-ggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgcagcttgtgtggg 44757781  T
Q  304 gttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaat 403  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| || ||| ||||||||||    
T  44757782 gttcatataacggtcaacaaagacccttgacatcaaagaaatacacagaaaattacataacatctggcccggatttctgtttccggaaa-cactaacaat 44757880  T
Q  404 ctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||| ||||||| |||||| | || ||||||||||  | || |||||||||||||||||| |||||||||||||||||||||||    
T  44757881 ctggttcggattacgtaatctgaactaggggtatttatgaaatttttgcagggcgcgcgagaaggcagcatggtgggaaaagtaa 44757965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 49 - 440
Target Start/End: Complemental strand, 41723671 - 41723280
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaac---cactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaatagg 145  Q
    |||||||||||| ||||||||||||||| | |||||   ||| |||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  41723671 ttcagagccattaatgtgggtttggacgataacaacaaccaccaacacgttttcattgactatattaatgacctag-acttgttttaggctataaatagg 41723573  T
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||||||||||||||    
T  41723572 ctttcatcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttttgtttttt-aggggtgtcgatggtgtcatg 41723474  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  41723473 gtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagcttgtgtggggttcatataacggtcaacagagacccttgacat-aaaaaaag 41723375  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtatttt 440  Q
    ||| | ||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||||||  ||||||||| |||||||||||    
T  41723374 acacaaaaaattaaataacatctggtccagatttctgtttccaaaaatcactaacaatctgatccggattatacaatccggacaaggggtatttt 41723280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 52 - 488
Target Start/End: Complemental strand, 38860814 - 38860386
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| ||    
T  38860814 agagccattaatgtgggtttggacggttactaccactaacacgttttcattgaatgtattaatgatctatgacttgttttaggctataaataggctttca 38860715  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |               || ||||||| ||||||||| ||||||    
T  38860714 tcttcaacaaataccttcattcttcacttcacctcttttcttccgttttcttcaaatgtttttagtttttt--agaggtgtcggtggtgtcatcgtcatt 38860617  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| ||| |||| |||||||     |||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |     
T  38860616 gttgaccgttcatatgaatcctgcaattgca-----ttgcagcttgtgtgaggttcatataacggtcaacagagacccttgacatctaagaaagacacaa 38860522  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||| ||||||||||||||||||||||| ||||||   || ||||||||||| |||||||||||| ||||||| || ||||||||||| | ||||||||    
T  38860521 aaaatcacataacatctggtccggatttc-gttttccggaaacactaacaatcgggtccggattatataatccgaacaaggggtatttttggaaattttg 38860423  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||| ||||| ||| |  | ||||||||||||||    
T  38860422 cagggcgtgcgagaaggaaatagggtgggaaaagtaa 38860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 52 - 489
Target Start/End: Complemental strand, 49851846 - 49851416
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||  |||| |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  49851846 agagccatcaatgtaggtttggacggttacaaccactaacatgttttcattgactgtactaatgacctaggacttgttttaggctataaataggctttca 49851747  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  49851746 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatgtttttagtttttt--aggggtgtcggtggtgtcatggtcatt 49851649  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||| ||||||||| |||||||| |||||||     ||| || ||||||  | ||||||||||||||||||||| |||||||||| ||||||||||| |     
T  49851648 gttgtccgttcatatgaaccctgcaattgca-----ttgtagtttgtgtgagattcatataacggtcaacagaggcccttgacattaaagaaagacacaa 49851554  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||||||||||| |||||| ||| || | ||||||||||||||| |||| ||||| |||| |||||||| |||||||| | ||||||||    
T  49851553 aaaagcacataacatctggtccgaatttctttttccggatatcactaacaatctgatccgaattatataattcggaccagcggtatttttggaaattttg 49851454  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
     |||||||||||| |||||||| |||||||||||||||    
T  49851453 aagggcgcgcgagaaggcagcagggtgggaaaagtaaa 49851416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 146 - 488
Target Start/End: Complemental strand, 22858801 - 22858461
Alignment:
Q  146 cttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatg 245  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |               |||||||||||||||||||||    
T  22858801 cttccatcttcaacaaataccttcattcttcacatcacctcttttcttacattttcttcaaatgtttttagtttttt--aggggtgtcgatggtgtcatg 22858704  T
Q  246 gtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22858703 gtcattgttgaccgttcataggaaccctgtaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacaaagacccttgacatcaaagaaag 22858604  T
Q  346 acatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaa 445  Q
    ||| |||||||||||||||||||||| ||||||| |||||  | || |||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  22858603 acacagaaaattacataacatctggttcggatttatgtttctgaaagtcactaacaatctgttccagattatgtaatccggaccagaggtattttagtaa 22858504  T
Q  446 attttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| |||| |||||||||||||||| | || |||||||||    
T  22858503 attttgtagggtgcgcgaggaggcagcaagatgagaaaagtaa 22858461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 52 - 488
Target Start/End: Original strand, 11952421 - 11952844
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||   | ||||| ||||||||||||||||||||||||    
T  11952421 agagccattaatgtgagtttggacggttacaaccactaacacgttttcattgactgtattaatgacaaaagacttattttaggctataaataggcttcca 11952520  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |               | |||||||| |||||| |||||||||    
T  11952521 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaatg--tttttaattttttaagggtgtcggtggtgttatggtcatt 11952618  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      |||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| | |     
T  11952619 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataacggtcaacagagaccattgacataaaagaaagatacaa 11952713  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||||||||||||||||   ||| ||||||||||||||||||| |||||||||||   |||||||||| || |||||| | ||||||||    
T  11952714 aaaaacacataacatctggtccggatttaattttccgcaaatcactaacaatcttgtccggattat---atccggaccatggatatttttggaaattttg 11952810  T
Q  452 cagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||| || || ||||||   ||||||||||||||    
T  11952811 cagggcgagctagaaggcag---ggtgggaaaagtaa 11952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 73 - 469
Target Start/End: Complemental strand, 12528562 - 12528174
Alignment:
Q  73 gacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcatt 172  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12528562 gacggttacaaccaccaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcatt 12528463  T
Q  173 cttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcataggaaccc 272  Q
    ||||||||||||| ||||||||||||||||||||| |               |||||| |||  ||||||||||||||||||||||||||||| ||||||    
T  12528462 cttcacttcacctattttcttccattttcttcaaatg--tttttagttttttaggggtatcggcggtgtcatggtcattgttgaccgttcatatgaaccc 12528365  T
Q  273 tgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtc 372  Q
    || |||   ||  |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||  ||||||  |||||| |||| |||    
T  12528364 tgcaat---aa--cattgctgcttgtgtaaggttcatataacggtcaacagagatccttgacatcaaagaaaaactcagaaaagcacataatatctagtc 12528270  T
Q  373 cggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggc 469  Q
    | |||||| ||||||   |||||||||||||||| ||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||    
T  12528269 cagatttc-gttttctggaatcactaacaatctgatccgggttatgtaatccggacgaggggtatttttgaaaattttgcagggcgcgcgagaaggc 12528174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 54 - 463
Target Start/End: Original strand, 52632362 - 52632761
Alignment:
Q  54 agccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatc 153  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52632362 agccattaatgtgggtttagacggttacaaccactaacacgttttcattgattgtattaatgacctaggacttgttttaggctataaataggcttccatc 52632461  T
Q  154 tttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgt 253  Q
    || |||||||  |||||||||||||||||||||||||| |||||||| |||||| |               ||||||||||  ||||| |||||||||||    
T  52632462 ttcaacaaatgtcttcattcttcacttcacctcttttcctccattttattcaaatg----tttagttttttaggggtgtcggaggtgttatggtcattgt 52632557  T
Q  254 tgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaa 353  Q
    || | ||||||| |||||||| |||   ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  52632558 tgtctgttcatatgaaccctgcaat---aa--cattgcagcttgtgt-gggttcatataacggtcaacagagacccttgacatcaaagaaagacaccaaa 52632651  T
Q  354 aattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgca 453  Q
    ||   ||||| |||||||||| ||||   ||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||||    
T  52632652 aagcgcataatatctggtccgaatttaattttccggaaatcactaacaatctgatccggattatataatctggaccaggggtatttttgaaaattttgca 52632751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 52 - 410
Target Start/End: Complemental strand, 41091305 - 41090955
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41091305 agagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttcca 41091206  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |               |||||||||| ||||||||||||||||    
T  41091205 tcttcaacaaataccttcattcttcacttcacttcttttcttccattttctttaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 41091108  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||| ||| |     
T  41091107 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtgtggttcatataacggtcaacagagacccttcacatcaatgaaaaacaca- 41091014  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtcc 410  Q
    ||||   |||||||||||||||| |||||  ||| || | |||||||||||||||||||    
T  41091013 aaaagcgcataacatctggtccgaatttcgttttccggatatcactaacaatctggtcc 41090955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 237 - 488
Target Start/End: Original strand, 48965075 - 48965326
Alignment:
Q  237 ggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacat 336  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  48965075 ggtgtcattgtcattgttgaccattcataggaaccctgcaattgcaatgcattgcagcttgtgtggggttcatataacggtcaacagagacctttgacat 48965174  T
Q  337 caaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggta 436  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| | ||| ||||    
T  48965175 caaagaaagacacagaaaattacataatatctggtccggatttctgtttccagaaatcactaacaatctggtccggattatgtaatccgaatcagtggta 48965274  T
Q  437 ttttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||| |||||||||| || |||||||| ||||  ||||||||    
T  48965275 ttttagtaaattttacagggcgcgcaagaaggcagcagggtgaaaaaagtaa 48965326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 52 - 410
Target Start/End: Complemental strand, 41086537 - 41086187
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41086537 agagccattaatgtgggtttggaaggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagactataaataggcttcca 41086438  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |               |||||||||| ||||||||||||||||    
T  41086437 tcttcaacaaataccttcattcttcacttcacttcttttcttccattttctttaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 41086340  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||| ||| |     
T  41086339 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtgtggttcatataacggtcaacagagacccttcacatcaatgaaaaacaca- 41086246  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtcc 410  Q
    ||||   |||||||||||||||| |||||  ||| || | |||||||||||||||||||    
T  41086245 aaaagcgcataacatctggtccgaatttcgttttccggatatcactaacaatctggtcc 41086187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 52 - 469
Target Start/End: Original strand, 41900288 - 41900696
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  41900288 agagccattaatgtgggtttggacggttacaaccactaacacattttcattgactgtattaatgacctatgacttgttttaggctataaataggcttcca 41900387  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| || ||||||||||||||||||| | |||||||||||||||||||||||||| |               |||||||||| ||||||||||||||||    
T  41900388 tcttcaataaataccttcattcttcaccttacctcttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 41900485  T
Q  252 gttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatag 351  Q
    |||||||||||||| |||||||| |||      |||||||||||||||| |||||||||||| ||| |||||||| | || |||||||  ||||||| |     
T  41900486 gttgaccgttcatatgaaccctgcaat-----agcattgcagcttgtgtggggttcatataaaggtgaacagaga-cattaacatcaacaaaagacacaa 41900579  T
Q  352 aaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttg 451  Q
    ||||  ||||||||||||||||||||||   ||| || |||||| |||||| || ||||| ||||| ||||||||| ||||| |||||| | ||||||||    
T  41900580 aaaagcacataacatctggtccggattt-aatttccggaaatcattaacaaccttgtccgaattatataatccggatcagggatatttttggaaattttg 41900678  T
Q  452 cagggcgcgcgaggaggc 469  Q
    |||| | |||||| ||||    
T  41900679 caggactcgcgagaaggc 41900696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 68 - 489
Target Start/End: Complemental strand, 27216920 - 27216505
Alignment:
Q  68 gtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacct 167  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||||| |||||| || |||||| |    
T  27216920 gtttggacggttacaaccactaacacgttttcattgattgtactaatgacctaggacttgttttaggctataaataggctttcatcttcaaaaaatactt 27216821  T
Q  168 tcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcattgttgaccgttcatagg 267  Q
    |||||||||||||||||||||||||||||||||||||||| |               |||||||||| ||||||| |||| ||||||||||||||||| |    
T  27216820 tcattcttcacttcacctcttttcttccattttcttcaaatg--tttttagttttttaggggtgtcggtggtgtcttggtgattgttgaccgttcatatg 27216723  T
Q  268 aaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataac-at 366  Q
    ||||||| |||     ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||   ||||  ||||||| ||    
T  27216722 aaccctgcaat-----tgcattgcagcttgtgtggcgttcatataacgatcaacagagacccttgacatcaaagaaagacactaaaaagcacataacaat 27216628  T
Q  367 ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgagga 466  Q
     ||||||| |||||  ||| || |||||| ||||||| | |||| |||||| ||  ||||| ||| | |||||| | || |||||||||||||||||| |    
T  27216627 atggtccgaatttcgttttccggaaatcaataacaatattgtcctgattatatagcccggatcagagatatttttgaaatttttgcagggcgcgcgagaa 27216528  T
Q  467 ggcagcatggtgggaaaagtaaa 489  Q
     |||| | |||||||||||||||    
T  27216527 agcagtaaggtgggaaaagtaaa 27216505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 52 - 463
Target Start/End: Original strand, 23984039 - 23984440
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||||    
T  23984039 agagtcattaatgagggtttggacggttacaaccactaacatgttttcattgactgta---atgacctaggacttgttttaggctataaataggtttcca 23984135  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtcatt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |               |||||||||| ||||||||||||||||    
T  23984136 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttaaaatg--tttttagttttttaggggtgtcggtggtgtcatggtcatt 23984233  T
Q  252 gttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacata 350  Q
    ||||||||||||||  ||||      ||||||| |||||||| |||||||  | |||||||||||||||||||||||  ||||||||||||||||||| |    
T  23984234 gttgaccgttcatataaacc------ttgcaatagcattgcaacttgtgtgagattcatataacggtcaacagagactattgacatcaaagaaagacaca 23984327  T
Q  351 gaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaatttt 450  Q
     ||||  |||||||||||||||||||| ||  ||| |  | |||||||||||||||||| ||||||| ||||| ||| ||||| ||||||  || |||||    
T  23984328 aaaaaacacataacatctggtccggatatcgttttcctgacatcactaacaatctggtctggattatataatctggatcagggttatttttatacatttt 23984427  T
Q  451 gcagggcgcgcga 463  Q
     ||||||| ||||    
T  23984428 acagggcgtgcga 23984440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 52 - 207
Target Start/End: Original strand, 50261992 - 50262147
Alignment:
Q  52 agagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttcca 151  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50261992 agagtcattaatgtgggtttgaacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttcca 50262091  T
Q  152 tctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50262092 tcttcaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 50262147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 309 - 490
Target Start/End: Original strand, 50262177 - 50262357
Alignment:
Q  309 tataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctggt 408  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||  |||||| ||| ||||||||||| | |    
T  50262177 tataacggtcaacagaaacccttgacatcaaagaaagacacaaaaaatcacataacatctggtccggatttcgtttttcggaaa-cactaacaatcggat 50262275  T
Q  409 ccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    ||| ||||| |||||| ||| ||||||||||| | ||||||||||||||||| ||| |||||  ||||||| ||||||||||    
T  50262276 ccgaattatataatccagactaggggtatttttggaaattttgcagggcgcgtgagaaggcaatatggtggaaaaagtaaaa 50262357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 308 - 472
Target Start/End: Original strand, 46597388 - 46597551
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaatctgg 407  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||| ||||||||||||| |||     
T  46597388 atataacggtcaacaaagatccttgacatcaaataaagacacagaaaattacataacatctgattcggatttatgttttcggaaatcactaacaacctga 46597487  T
Q  408 tccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagc 472  Q
    ||| |||||||||||||| | || |||||||||| |||||||||||||| ||||||| |||||||    
T  46597488 tcc-gattatgtaatccgaatcaagggtattttaataaattttgcagggtgcgcgagaaggcagc 46597551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 5749975 - 5750221
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||||||| |||    
T  5749975 tggtgtcatggtcattgttgactgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagaccctttaca 5750069  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | | |  ||| |||||     || || ||| ||||||||||||||||||||||| |||||||||||||||||    
T  5750070 tcaaagaaagacacaaaatatt-catatcgtatttgtctggattatatattacggaaa-cactaacaatctggtccggattacgtaatccggaccagggg 5750167  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||| | || ||||||||||||| |||| ||||  || ||||||||||||||    
T  5750168 tatttttggaatttttgcagggcgcccgagaaggctacagggtgggaaaagtaa 5750221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 487
Target Start/End: Original strand, 22335083 - 22335328
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||| |||||||||||||||||||||    
T  22335083 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataatggtcaacagagacccttgaca 22335177  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| ||||   | |  |||||||||     || || ||| ||||||||||||||||||||||| |||||||||||||||||    
T  22335178 tcaaagaaagacagaaaatatt-catattgtatttgtccggattatatattccggaaa-cactaacaatctggtccggattacgtaatccggaccagggg 22335275  T
Q  435 tattt-tagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagta 487  Q
    ||||| ||| || |||||||||||||||||| |||||  | |||||||||||||    
T  22335276 tatttatag-aatttttgcagggcgcgcgagaaggcaatagggtgggaaaagta 22335328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 236 - 485
Target Start/End: Complemental strand, 18272222 - 18271979
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  18272222 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 18272128  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | ||||||| || | | |||   || |||||||||||||||||||||||  |||||  ||||| |||    
T  18272127 tcaaagaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatctggtccggattacataatctagaccaaggg 18272030  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaag 485  Q
    |||||  | || |||||| ||||||||||| ||||| || |||||||||||    
T  18272029 tatttatggaatttttgctgggcgcgcgagaaggcaacagggtgggaaaag 18271979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 236 - 485
Target Start/End: Complemental strand, 18276876 - 18276633
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||||||||||    
T  18276876 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacccttgaca 18276782  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | ||||||| || | | |||   || |||||||||||||||||||||||  |||||  ||||| |||    
T  18276781 tcaaagaaagacacaaaatatt-catatcgtatttgtccgga-ttatatattccggaaacactaacaatctggtccggattacataatctagaccaaggg 18276684  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaag 485  Q
    |||||  | || |||||| ||||||||||| ||||| || |||||||||||    
T  18276683 tatttatggaatttttgctgggcgcgcgagaaggcaacagggtgggaaaag 18276633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 3475447 - 3475693
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||| |||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||| ||||||||||||    
T  3475447 tggtgtcattgtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacaaagacccttgaca 3475541  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||||||| | || ||| |||| | |  | |||| || || | | |||   || ||||||||||||||||||||||| |||||||||| ||||||    
T  3475542 tcaaagaaagacaaaaaatatt-catatcgtatttgtcc-gaattatatattctggaaacactaacaatctggtccggattacgtaatccggatcagggg 3475639  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||  | || ||||| ||||| |||||| ||||| || ||||  ||||||||    
T  3475640 tatttatggaatttttgtagggcacgcgagaaggcaacagggtgaaaaaagtaa 3475693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 29250653 - 29250486
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| ||||||| || ||||  |||| ||     ||||||||| ||| ||| | ||||||||||||||| |||||||| |||    
T  29250653 tggtgtcatggtcattgttgactgttcatacgacccctacaatttca-----ttgcagcttatgtgggggttatataacggtcaacatagacccttaaca 29250559  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggt 408  Q
    ||||||||||||| | |||||| |||| |||  | ||||||||||  |||| || |||||||||||||||||||    
T  29250558 tcaaagaaagacaca-aaaatttcatatcatatttgtccggattttagtttccggaaatcactaacaatctggt 29250486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 30518205 - 30518293
Alignment:
Q  119 taggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||||||||||||| ||| || || ||||  ||||||||||||||| | |||||||||| |||||||||||||    
T  30518205 taggacttgttttaggctataaataggcttgcatgttcaaaaaatttcttcattcttcacttaatctcttttctttcattttcttcaaa 30518293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 34549931 - 34549851
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    ||||||||||||||||||||||||||||||||| || ||| || ||||||| |||||||||||||| |||||| |||||||    
T  34549931 atgatctaggacttgttttaggctataaataggtttgcatattcaacaaattccttcattcttcacgtcacctgttttctt 34549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 48964984 - 48965055
Alignment:
Q  136 tataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||| |||||||||||||    
T  48964984 tataaataggcttccatcttcaacaaatacgttcattcttcatatcacctcttttcttacattttcttcaaa 48965055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 346
Target Start/End: Original strand, 10223349 - 10223454
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || ||||||||||||||||||| |||||||    
T  10223349 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagactcttgaca 10223443  T
Q  336 tcaaagaaaga 346  Q
    |||||||||||    
T  10223444 tcaaagaaaga 10223454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 29947018 - 29947111
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||  | || |||||||||||||||||| ||||| || ||||||||||||||    
T  29947018 cactaacaatctggtccggattacgtaatccg-accatgggtatttatggaatttttgcagggcgcgcgagaaggcaacagggtgggaaaagtaa 29947111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 488
Target Start/End: Original strand, 12525087 - 12525332
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||  || ||||| |||||||||||||||||||||    
T  12525087 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggagtcgtataaaggtcaacagagacccttgaca 12525181  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    |||||||||||||   || ||| |||| | |  | ||| ||| || | | |||   || |||||||||| |||||||||||| |||||||||||||||||    
T  12525182 tcaaagaaagacaccaaatatt-catatcgtatttgtctgga-ttatatattccggaaacactaacaatttggtccggattacgtaatccggaccagggg 12525279  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    || ||||   |||||| ||||| ||||||| ||||| ||  |||||||||||||    
T  12525280 ta-tttatggaatttttcagggagcgcgagaaggcaacaatgtgggaaaagtaa 12525332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 486
Target Start/End: Complemental strand, 39598166 - 39597923
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||||| || ||||| |||||||     ||||||||| ||  ||| || |||||||||||||||||||| ||||||    
T  39598166 tggtgtcatggtcattgttgaccgctcatacgacccctgcaattgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagacctttgaca 39598072  T
Q  336 tcaaagaaagacatagaaaattacataacat-ctggtccggatt-tctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggg 433  Q
    |||| |||||||| | || ||| |||| | |  | |||| |||| | | || | |  || ||||||||||||||||||||||| |||||||||  |||||    
T  39598071 tcaacgaaagacacaaaatatt-catatcgtatttgtccagattatatattatgg--aaacactaacaatctggtccggattacgtaatccggctcaggg 39597975  T
Q  434 gtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagt 486  Q
    ||| ||||   ||||||| |||||||| ||| ||||| || ||||||||||||    
T  39597974 gta-tttatggaattttgtagggcgcgtgagaaggcaacagggtgggaaaagt 39597923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 489
Target Start/End: Original strand, 7564811 - 7565012
Alignment:
Q  284 tgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagacatagaaaattacataacatctg-gtccggatttctg 382  Q
    ||||||||||||| ||| ||| || ||||||| ||||||  |||||||||||||||||||||||| |   |||| |||| |   || || ||||||| |     
T  7564811 tgcattgcagcttatgttggggtc-tataacgatcaacaacgacccttgacatcaaagaaagacaca---aatttcatatcgcatgcgtacggattt-ta 7564905  T
Q  383 ttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaa 482  Q
    |||||   || ||||||||||||||||||||  | ||||||||||||| || |||||| | || |||||||  ||||||||| |||||||| ||||||||    
T  7564906 ttttccagaaacactaacaatctggtccggaaaacgtaatccggaccaaggatatttttggaatttttgcaaagcgcgcgagaaggcagcagggtgggaa 7565005  T
Q  483 aagtaaa 489  Q
    |||||||    
T  7565006 aagtaaa 7565012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 236 - 484
Target Start/End: Original strand, 10313271 - 10313513
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaat-gcattgcagcttgtgtagggttcatataacggtcaacagagacccttgac 334  Q
    |||||||||||||||||||||||| ||||| || |      |||||||| |||||| ||||| ||  | | || ||||||||||||||||||||||| ||    
T  10313271 tggtgtcatggtcattgttgaccgctcatacgacc------attgcaattgcattgtagcttatgcggcggtcgtataacggtcaacagagacccttaac 10313364  T
Q  335 atcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggg 433  Q
    |||||||||||||| | || ||| |||| | | |  |||||||||     || || ||| ||||||||||||||||||||||| ||||||  ||||||||    
T  10313365 atcaaagaaagacacaaaatatt-catatcgtatttgtccggattatatattccggaaa-cactaacaatctggtccggattacgtaatctagaccaggg 10313462  T
Q  434 gtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaa 484  Q
     |||||   ||| |||||||||||| ||||| ||||| || ||||||||||    
T  10313463 atatttacataatttttgcagggcgagcgagaaggcaacaaggtgggaaaa 10313513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 30518293 - 30518387
Alignment:
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    ||||||||||||||||| || ||||| |||||||     ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||| |||||||    
T  30518293 attgttgaccgttcatacgacccctgcaattgca-----ttgcagcttatgtgggggttatataacggtcaacagagacccttgacatcaaaaaaagaca 30518387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 7199658 - 7199765
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||||| ||| | || ||||| | |||||     ||||||||| ||  ||| || |||||||||||||||||||| ||||||    
T  7199658 tggtgtcatggtcattgttgaccgctcagacgacccctgcagttgca-----ttgcagcttatgcgggggtcgtataacggtcaacagagaccattgaca 7199752  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  7199753 tcaaagaaagaca 7199765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 41366914 - 41366790
Alignment:
Q  69 tttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaatacctt 168  Q
    ||||||| ||||  ||||| |||||||||| ||||||| || | | || ||||||| |||||||||||||||||||| || ||| || |||||   ||||    
T  41366914 tttggacagttagcaccacaaacacgtttttatttactatacttaagacctaggacatgttttaggctataaataggtttgcatattcaacaatctcctt 41366815  T
Q  169 cattcttcacttcacctcttttctt 193  Q
    ||||| |||||||||||||| ||||    
T  41366814 cattcgtcacttcacctcttctctt 41366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 14270254 - 14270189
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgc 459  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||  | || |||||||||||||    
T  14270254 cactaacaatctggtccggattacgtaatccggaccagaggtatttatggaatttttgcagggcgc 14270189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 48964925 - 48964986
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtat 110  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48964925 ttcagagtcattaatgtgggtttggacggttagaatcactaacacgttttcattgactgtat 48964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 490
Target Start/End: Original strand, 22817656 - 22817903
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||| ||| ||||| || ||||| |||||||     ||||||||| ||  | | || | |||||||||| ||||||||||||||    
T  22817656 tggtgtcatggtcattgttgtccgctcatacgacccctgcaattgca-----ttgcagcttatgcggaggtcgtttaacggtcaagagagacccttgaca 22817750  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||||||| ||  | |||||| |||| ||| || |||||||||| | |||||   || ||||||||||||||| | ||  | | |||||  ||| ||||    
T  22817751 tcaaagaaaaac--acaaaatttcatagcatatgcgtccggattt-tattttccggaaacactaacaatctggttcagaaaacgaaatccaaacctgggg 22817847  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaaa 490  Q
    |||| | |  | |||||||||||||||||| |||||  | ||||| ||||||||||    
T  22817848 tattattgggacttttgcagggcgcgcgagaaggcaatagggtggaaaaagtaaaa 22817903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 488
Target Start/End: Complemental strand, 4851665 - 4851572
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||| ||| || | |||||||||||| |||| ||| | || |||||||||||| ||||| || || |||||||||||||||||    
T  4851665 cactaacaatctggtctggaatacgaaatccggaccagaggtaattttgaaatttttgcagggcg-gcgagaagacaacatggtgggaaaagtaa 4851572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 29913928 - 29913810
Alignment:
Q  89 aacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctt 188  Q
    ||||||||||||||  ||||| | || | |||||||||||||| || |||||||| ||||  |||||  |||| |  |||||||||||| | ||||||||    
T  29913928 aacacgttttcattgtctgtacttataacctaggacttgttttgggttataaataagcttgaatcttctacaattttcttcattcttcattacacctctt 29913829  T
Q  189 ttcttccattttcttcaaa 207  Q
    | ||| |||||||||||||    
T  29913828 tacttacattttcttcaaa 29913810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 12524965 - 12525049
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| ||||||||||| |||||||||||||    
T  12524965 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcttttcttacattttcttcaaa 12525049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 489
Target Start/End: Complemental strand, 21187447 - 21187206
Alignment:
Q  238 gtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatc 337  Q
    |||||||||||||||||||||| ||||| || ||||| |     | ||||||||||||| ||  ||| || ||||||||||| |||||| ||||||||||    
T  21187447 gtgtcatggtcattgttgaccgctcatacgacccctgca-----actgcattgcagcttatgcgggggtcgtataacggtcagcagaga-ccttgacatc 21187354  T
Q  338 aaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccaggggta 436  Q
    ||||||    ||| | |||| ||||   | || ||||| |||| | |||||   || |||||||||| |||| ||||  | ||||||| ||| |  ||||    
T  21187353 aaagaa----atacacaatttcatattgtatgcgtccgaattt-tattttcaggaaacactaacaatttggttcggaaaacgtaatccagactaatggta 21187259  T
Q  437 ttttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaaa 489  Q
    |||| | || ||||||| |||||||||| |||||||| |||||||||||||||    
T  21187258 tttttggaacttttgcatggcgcgcgagaaggcagcagggtgggaaaagtaaa 21187206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 22334962 - 22335046
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||| ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  22334962 gacttgttttaggctataaaaaggcttcgatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 22335046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 14270404 - 14270297
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||||||||||||||||||| | ||||| || ||||  |||||||     ||||||||| ||   || || |||||||||||||| ||| | ||||||    
T  14270404 tggtgtcatggtcattgttgactgctcatacgacccctacaattgca-----ttgcagcttatgcgtgggtcgtataacggtcaacaaagatcattgaca 14270310  T
Q  336 tcaaagaaagaca 348  Q
    |||||||||||||    
T  14270309 tcaaagaaagaca 14270297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 29913779 - 29913676
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    ||||||||||||||||| |||| |||||||  |||| || ||     |||| ||||||||| ||  ||| | |||||||||| |||||||||| ||||||    
T  29913779 tggtgtcatggtcattgctgactgttcatataaaccttgcaa-----atgctttgcagcttatgcggggattatataacggttaacagagacctttgaca 29913685  T
Q  336 tcaaagaaa 344  Q
    |||||||||    
T  29913684 tcaaagaaa 29913676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 33936792 - 33936756
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||||| |||||||||||||||    
T  33936792 atataacggtcaacagagacctttgacatcaaagaaa 33936756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 3475323 - 3475407
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  3475323 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 3475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 18272345 - 18272261
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  18272345 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 18272261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 18276999 - 18276915
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  18276999 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 18276915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 22858839 - 22858800
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccact 88  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  22858839 ttcagagccattaatgtgggttttgacggttacaaccact 22858800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 29946825 - 29946909
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  29946825 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 29946909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 39598288 - 39598204
Alignment:
Q  122 gacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttca-cctcttttcttccattttcttcaaa 207  Q
    |||||||||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||| |||| |||||| |||||||||||||    
T  39598288 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcctttcttacattttcttcaaa 39598204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 488
Target Start/End: Complemental strand, 41086182 - 41086123
Alignment:
Q  429 caggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||| | ||||||||||| ||||||||| |||||||| | | ||||||||||    
T  41086182 caggggtatttttggaaattttgcagagcgcgcgagaaggcagcaggataggaaaagtaa 41086123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 488
Target Start/End: Complemental strand, 41090950 - 41090891
Alignment:
Q  429 caggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||| | ||||||||||| ||||||||| |||||||| | | ||||||||||    
T  41090950 caggggtatttttggaaattttgcagagcgcgcgagaaggcagcaggataggaaaagtaa 41090891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 488
Target Start/End: Complemental strand, 50890340 - 50890246
Alignment:
Q  394 cactaacaatctggtccggattatgtaatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    ||||||||||||||| ||||  |   |||| |||||||| ||||||| | || |||||||||||| | ||| |||||||| ||| ||||||||||    
T  50890340 cactaacaatctggttcggaaaacaaaatctggaccaggagtatttttgaaatttttgcagggcgtgtgagaaggcagcagggtaggaaaagtaa 50890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 41723944 - 41723899
Alignment:
Q  5 gaggagcagagagtgggagaagatggtggggtttggaaggctattt 50  Q
    |||||| |||| |||||||| |||||||||||||||||| ||||||    
T  41723944 gaggaggagagggtgggagaggatggtggggtttggaagactattt 41723899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 48892185 - 48892096
Alignment:
Q  104 actgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttctt 193  Q
    |||||| | |||||||| ||||||||| ||| ||||||||||||   |||||  |||| | | ||||||||||||||| | |||||||||    
T  48892185 actgtagttatgatctatgacttgtttaaggttataaataggctagtatcttcgacaatttcattcattcttcacttcccatcttttctt 48892096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 29250747 - 29250678
Alignment:
Q  136 tataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaa 207  Q
    |||||| ||||||  ||||| ||||| | ||||||||||||  |||||||| |||||| |||||||||||||    
T  29250747 tataaaaaggcttggatcttcaacaatttccttcattcttc--ttcacctcctttcttacattttcttcaaa 29250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 41366760 - 41366716
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattg 280  Q
    ||||||||||||| ||||||||||||||||  |||| ||||||||    
T  41366760 tggtgtcatggtccttgttgaccgttcatataaaccttgaaattg 41366716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 49 - 403
Target Start/End: Complemental strand, 1796 - 1449
Alignment:
Q  49 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcatttactgtattaatgatctaggacttgttttaggctataaataggctt 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||||||||||  || | |||||||||| ||||||||||||||    
T  1796 ttcagagccattaatgtgggtttggacggttacaaccactaacttgttttcgttgactgtattaatgacttaaggcttgttttagactataaataggctt 1697  T
Q  149 ccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaaacgnnnnnnnnnnnnnnnaggggtgtcgatggtgtcatggtc 248  Q
    ||| ||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||| |               |||||||||| |||||| ||||||    
T  1696 ccaacttcaacaaataccttcattcttcagttcacctattttcctccattttcttcaaatg--tttttatttttataggggtgtcggtggtgttatggtc 1599  T
Q  249 attgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaagaca 348  Q
    |||||||||| |||||| |||||||| |||      |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1598 attgttgaccattcatatgaaccctgcaat-----agcattgtagcttgtgtgaggttcatataacggtcaacagagacccttgacatcaaagaaagaca 1504  T
Q  349 tagaaaattacataacatctggtccggatttctgttttcgcaaatcactaacaat 403  Q
     |||||||  |||||||| |||||||||||||  ||| || | ||||||||||||    
T  1503 cagaaaatcgcataacatatggtccggatttcgttttccggatatcactaacaat 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 1445 - 1377
Alignment:
Q  419 taatccggaccaggggtattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    |||||||||||||||||||||||| ||||||| || ||||| |||| || || || ||||||||||||||    
T  1445 taatccggaccaggggtattttagaaaattttaca-ggcgcacgagaagacatcaaggtgggaaaagtaa 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 19067 - 19176
Alignment:
Q  97 ttcatttactgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttcca 196  Q
    |||||| |||||| | |||| ||| ||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||| |||||||||| ||    
T  19067 ttcattgactgtacttatgacctaagacttgttttaggctataaataggctctcatcttcaacaaattccttcattcttcacttcaactcttttcttaca 19166  T
Q  197 ttttcttcaa 206  Q
    ||||||||||    
T  19167 ttttcttcaa 19176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 19271 - 19307
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19271 atataacggtcaacaaagacctttgacatcaaagaaa 19307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 8164 - 8264
Alignment:
Q  106 tgtattaatgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttca 205  Q
    |||||| ||||||||||||| |||| ||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||    
T  8164 tgtatttatgatctaggactggtttaaggctataactaggcttggatctttaacaatttccttcattcttcacttcacctcttttcttacatttacttca 8263  T
Q  206 a 206  Q
    |    
T  8264 a 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 8341 - 8398
Alignment:
Q  288 ttgcagcttgtgtagggttcatataacggtcaacagagacccttgacatcaaagaaag 345  Q
    ||||||||| || |||| | |||||||||||||| |||| | ||||||||||||||||    
T  8341 ttgcagcttatgcaggggttatataacggtcaactgagaacattgacatcaaagaaag 8398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 17301 - 17394
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||||||||||||||||||||||||||||||| ||  ||||| ||||||| | ||||||||||||||||||| ||||||| | ||||||||||    
T  17301 atgatctaggacttgttttaggctataaataggtttgtatcttcaacaaattctttcattcttcacttcacctattttcttactttttcttcaa 17394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 51916 - 51825
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctcttttcttccattttcttcaa 206  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||  || ||||||||||| ||||||||||||||||| | ||||||||||    
T  51916 atgatctaggacttgttttaggctataaataggtttgcatcttcaac--attccttcattcttaacttcacctcttttcttactttttcttcaa 51825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 427244 - 427321
Alignment:
Q  113 atgatctaggacttgttttaggctataaataggcttccatctttaacaaataccttcattcttcacttcacctctttt 190  Q
    ||||||||||| | || | ||||||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||    
T  427244 atgatctaggaatggtctaaggctataaataggcttgcatcttcaacaatttccttcattcttcacttcacctctttt 427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 427432 - 427468
Alignment:
Q  308 atataacggtcaacagagacccttgacatcaaagaaa 344  Q
    ||||||||||||||||||||  |||||||||||||||    
T  427432 atataacggtcaacagagacatttgacatcaaagaaa 427468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 488
Target Start/End: Complemental strand, 12152 - 11906
Alignment:
Q  236 tggtgtcatggtcattgttgaccgttcataggaaccctgaaattgcaatgcattgcagcttgtgtagggttcatataacggtcaacagagacccttgaca 335  Q
    |||||| ||||||||||||||| | ||||| || ||||| |||||||     ||||||||| |   ||| |  |||||||||||||||||||| ||||||    
T  12152 tggtgttatggtcattgttgactgctcatacgacccctgcaattgca-----ttgcagcttatacgggggttgtataacggtcaacagagaccgttgaca 12058  T
Q  336 tcaaagaaagacatagaaaattacataacatctg-gtccggatttctgttttcgcaaatcactaacaatctggtccggattatgtaatccggaccagggg 434  Q
    ||||| ||||||| | || ||| |||| | | |  |||||||||   | || || ||| |||||||||||| |||  || || | |||||||||||||||    
T  12057 tcaaataaagacacaaaatatt-catatcgtatttgtccggattatcggttccggaaa-cactaacaatctagtcttgaatacgaaatccggaccagggg 11960  T
Q  435 tattttagtaaattttgcagggcgcgcgaggaggcagcatggtgggaaaagtaa 488  Q
    || ||| | || |||||||||||||||||| ||||| || |||| | |||||||    
T  11959 taattttggaatttttgcagggcgcgcgagaaggcatcaaggtgaggaaagtaa 11906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University