View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16976_low_22 (Length: 333)

Name: NF16976_low_22
Description: NF16976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16976_low_22
NF16976_low_22
[»] chr8 (23 HSPs)
chr8 (128-333)||(3231840-3232045)
chr8 (1-74)||(3231713-3231786)
chr8 (197-324)||(41266897-41267024)
chr8 (193-320)||(29796431-29796558)
chr8 (147-300)||(11712064-11712217)
chr8 (195-307)||(8965802-8965914)
chr8 (156-308)||(7597559-7597710)
chr8 (147-267)||(10240139-10240259)
chr8 (191-309)||(30291549-30291668)
chr8 (191-309)||(27811222-27811339)
chr8 (195-320)||(40321013-40321137)
chr8 (191-319)||(1292570-1292697)
chr8 (191-319)||(4731592-4731719)
chr8 (191-319)||(41364954-41365081)
chr8 (191-319)||(43036357-43036484)
chr8 (214-319)||(38863805-38863909)
chr8 (191-231)||(1822313-1822353)
chr8 (191-231)||(1856758-1856798)
chr8 (29-73)||(8965580-8965624)
chr8 (255-320)||(5689204-5689269)
chr8 (191-232)||(30143361-30143401)
chr8 (191-232)||(42435098-42435138)
chr8 (1-73)||(32902055-32902122)
[»] chr5 (16 HSPs)
chr5 (145-319)||(3325847-3326020)
chr5 (154-324)||(13695761-13695931)
chr5 (147-311)||(35616110-35616274)
chr5 (147-284)||(316731-316867)
chr5 (193-311)||(16641046-16641167)
chr5 (191-319)||(19806318-19806443)
chr5 (147-286)||(10054880-10055017)
chr5 (191-307)||(10700755-10700872)
chr5 (191-319)||(13239686-13239812)
chr5 (191-311)||(40147203-40147322)
chr5 (147-319)||(25412696-25412864)
chr5 (191-330)||(5007473-5007612)
chr5 (147-182)||(30793206-30793241)
chr5 (191-308)||(42426342-42426458)
chr5 (191-232)||(38747026-38747066)
chr5 (253-308)||(42926838-42926893)
[»] scaffold0219 (1 HSPs)
scaffold0219 (147-324)||(27506-27683)
[»] chr7 (29 HSPs)
chr7 (211-318)||(3904744-3904851)
chr7 (191-324)||(36146514-36146648)
chr7 (147-320)||(4253592-4253765)
chr7 (221-333)||(26639240-26639352)
chr7 (196-320)||(18396247-18396374)
chr7 (191-318)||(5514116-5514243)
chr7 (194-293)||(1360263-1360361)
chr7 (191-320)||(41317541-41317669)
chr7 (191-319)||(1113591-1113718)
chr7 (191-319)||(4586095-4586222)
chr7 (147-293)||(5116564-5116709)
chr7 (191-319)||(31733076-31733203)
chr7 (191-319)||(47674050-47674177)
chr7 (191-319)||(23554974-23555101)
chr7 (191-319)||(43864178-43864305)
chr7 (191-295)||(30024839-30024943)
chr7 (191-319)||(47676243-47676370)
chr7 (191-231)||(22328498-22328538)
chr7 (195-324)||(12097970-12098098)
chr7 (191-311)||(2361079-2361198)
chr7 (191-319)||(14069940-14070067)
chr7 (191-319)||(14379968-14380095)
chr7 (192-320)||(31518728-31518855)
chr7 (191-232)||(2390303-2390343)
chr7 (191-232)||(22269994-22270034)
chr7 (191-232)||(23343995-23344036)
chr7 (191-232)||(29608758-29608798)
chr7 (191-232)||(48599441-48599481)
chr7 (218-321)||(30843366-30843469)
[»] chr6 (15 HSPs)
chr6 (147-320)||(4045355-4045528)
chr6 (147-311)||(25073509-25073673)
chr6 (191-309)||(9183138-9183255)
chr6 (191-324)||(3039010-3039142)
chr6 (191-319)||(28137515-28137642)
chr6 (191-309)||(26954393-26954509)
chr6 (191-311)||(21593606-21593725)
chr6 (191-232)||(2973046-2973086)
chr6 (191-232)||(5043648-5043688)
chr6 (191-232)||(16569054-16569095)
chr6 (191-232)||(17758044-17758084)
chr6 (191-232)||(17763011-17763051)
chr6 (191-232)||(21588952-21588992)
chr6 (281-322)||(24435799-24435839)
chr6 (191-311)||(26830230-26830350)
[»] chr3 (32 HSPs)
chr3 (191-308)||(1313912-1314029)
chr3 (191-324)||(29196493-29196627)
chr3 (199-304)||(37761585-37761690)
chr3 (147-321)||(8166520-8166695)
chr3 (191-320)||(9666573-9666703)
chr3 (155-311)||(5433947-5434104)
chr3 (191-320)||(32891036-32891165)
chr3 (191-320)||(44700585-44700714)
chr3 (147-304)||(33191780-33191935)
chr3 (149-321)||(5373155-5373336)
chr3 (191-320)||(31314378-31314506)
chr3 (147-293)||(35138769-35138915)
chr3 (191-319)||(5236563-5236690)
chr3 (191-319)||(40734432-40734559)
chr3 (191-319)||(44331479-44331606)
chr3 (191-311)||(46860414-46860535)
chr3 (147-272)||(40735364-40735487)
chr3 (147-319)||(45095099-45095267)
chr3 (191-248)||(54739060-54739117)
chr3 (191-250)||(39127550-39127608)
chr3 (236-278)||(2020123-2020165)
chr3 (191-311)||(4569893-4570013)
chr3 (191-309)||(51398758-51398875)
chr3 (281-322)||(6794532-6794572)
chr3 (191-247)||(7762270-7762326)
chr3 (255-319)||(9581217-9581281)
chr3 (191-232)||(30236146-30236186)
chr3 (191-232)||(34491233-34491273)
chr3 (191-232)||(43401909-43401949)
chr3 (191-232)||(46173378-46173418)
chr3 (274-322)||(23392099-23392146)
chr3 (256-319)||(29682293-29682356)
[»] chr4 (36 HSPs)
chr4 (156-320)||(6677401-6677565)
chr4 (195-278)||(21703947-21704030)
chr4 (191-324)||(36463496-36463628)
chr4 (194-324)||(37229832-37229962)
chr4 (191-319)||(24969045-24969173)
chr4 (191-322)||(6542286-6542418)
chr4 (236-295)||(38811340-38811399)
chr4 (194-305)||(44967939-44968050)
chr4 (191-308)||(5207949-5208066)
chr4 (191-319)||(5429613-5429740)
chr4 (147-272)||(33089859-33089983)
chr4 (191-319)||(47038517-47038643)
chr4 (191-319)||(48142976-48143104)
chr4 (154-311)||(12119479-12119637)
chr4 (191-320)||(52467461-52467590)
chr4 (191-308)||(23042896-23043013)
chr4 (191-319)||(26175743-26175870)
chr4 (147-320)||(48142441-48142614)
chr4 (147-319)||(56178701-56178870)
chr4 (194-319)||(5871754-5871878)
chr4 (147-293)||(34112775-34112922)
chr4 (154-226)||(26699513-26699585)
chr4 (146-293)||(32091438-32091584)
chr4 (191-319)||(34570521-34570648)
chr4 (191-311)||(55085472-55085591)
chr4 (191-311)||(379320-379441)
chr4 (191-311)||(21688190-21688310)
chr4 (202-319)||(13009549-13009665)
chr4 (202-322)||(51336995-51337116)
chr4 (147-232)||(2209734-2209818)
chr4 (191-233)||(27417072-27417113)
chr4 (191-307)||(31474096-31474212)
chr4 (191-319)||(52095469-52095596)
chr4 (191-232)||(12073413-12073453)
chr4 (199-309)||(29056301-29056411)
chr4 (281-322)||(39774133-39774173)
[»] chr1 (30 HSPs)
chr1 (191-318)||(928083-928211)
chr1 (199-320)||(44650278-44650399)
chr1 (147-262)||(22079307-22079421)
chr1 (147-320)||(2263038-2263214)
chr1 (147-232)||(3460716-3460801)
chr1 (191-319)||(10925157-10925284)
chr1 (191-319)||(15820241-15820368)
chr1 (191-311)||(19754436-19754556)
chr1 (191-309)||(28265661-28265778)
chr1 (147-319)||(31659172-31659342)
chr1 (191-308)||(49918294-49918411)
chr1 (199-319)||(197023-197142)
chr1 (191-322)||(4552744-4552874)
chr1 (154-271)||(37282762-37282877)
chr1 (199-270)||(44646899-44646969)
chr1 (191-320)||(50167282-50167410)
chr1 (191-319)||(834274-834401)
chr1 (191-311)||(11348640-11348759)
chr1 (191-311)||(37879018-37879137)
chr1 (251-309)||(43342422-43342480)
chr1 (191-311)||(193553-193672)
chr1 (191-309)||(1050551-1050668)
chr1 (191-319)||(3847228-3847355)
chr1 (191-311)||(37033180-37033299)
chr1 (191-232)||(8871155-8871196)
chr1 (191-284)||(12318630-12318722)
chr1 (191-232)||(29136268-29136308)
chr1 (274-319)||(30476638-30476682)
chr1 (191-232)||(47255447-47255487)
chr1 (192-232)||(13547197-13547236)
[»] chr2 (25 HSPs)
chr2 (191-324)||(7815380-7815513)
chr2 (195-324)||(13121697-13121826)
chr2 (147-247)||(33648176-33648276)
chr2 (214-324)||(28671858-28671968)
chr2 (191-332)||(11049470-11049614)
chr2 (147-232)||(24398077-24398162)
chr2 (191-319)||(34139878-34140005)
chr2 (191-247)||(26353189-26353245)
chr2 (191-278)||(42261593-42261682)
chr2 (191-320)||(36773495-36773623)
chr2 (191-319)||(11151698-11151825)
chr2 (191-319)||(11690435-11690562)
chr2 (191-309)||(36318116-36318233)
chr2 (191-319)||(42362286-42362413)
chr2 (147-319)||(5723320-5723488)
chr2 (191-320)||(33162557-33162685)
chr2 (191-319)||(723851-723978)
chr2 (191-319)||(17057476-17057603)
chr2 (191-319)||(17085459-17085586)
chr2 (242-321)||(42020030-42020109)
chr2 (191-319)||(29867803-29867930)
chr2 (4-73)||(12123462-12123526)
chr2 (255-319)||(14633996-14634060)
chr2 (255-319)||(39284819-39284883)
chr2 (33-73)||(7815174-7815214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (191-278)||(490428-490517)
[»] scaffold0014 (1 HSPs)
scaffold0014 (191-232)||(80390-80430)


Alignment Details
Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 3231840 - 3232045
Alignment:
Q  128 tgtttaaccatttcgacccatcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatt 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |||||||    
T  3231840 tgtttaaccatttcgacccatcaataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatt 3231939  T
Q  228 tctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacctctccaa 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  3231940 tctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaagagaacctctcaaa 3232039  T
Q  328 agaact 333  Q
    ||||||    
T  3232040 agaact 3232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3231713 - 3231786
Alignment:
Q  1 actaatatcaaagtaacctcaaacaaaccaacaacaacaataacaaatctagatataatcttggaatcaagtgt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3231713 actaatatcaaagtaacctcaaacaaaccaacaacaacaataacaaatctagatataatcttggaatcaagtgt 3231786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 41267024 - 41266897
Alignment:
Q  197 tcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttact 296  Q
    |||||||| || | ||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| ||||||| || |||||     
T  41267024 tcaacaagttctctaagaacaaaacctaatttctaccattttctcaaactcttcctaagaacaagagactcaatgatttcactcacccaaagtatttaca 41266925  T
Q  297 aatgtttcccaactcaacagaacctctc 324  Q
    | ||| ||||||| ||| ||||||||||    
T  41266924 actgtctcccaacccaagagaacctctc 41266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 29796431 - 29796558
Alignment:
Q  193 agcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtt 292  Q
    |||||||||||| || | ||||||||||| | ||||||||  ||||| ||||||||||  |||||||||||||||||||||||||| | |||||| | ||    
T  29796431 agcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctcaagaacaagagactcaatgaattcactcgcccaagatatt 29796530  T
Q  293 tactaatgtttcccaactcaacagaacc 320  Q
    ||| ||||||||||||| ||| ||||||    
T  29796531 tacaaatgtttcccaacccaagagaacc 29796558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 11712064 - 11712217
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||| |||||||||||||| |||| ||||        ||||||||||||||||| | | ||||||| |||||||| ||   ||||||||||||    
T  11712064 atcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattattttctcaatct 11712163  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatg 300  Q
    ||||| |||||||| ||||||||||| ||||| || ||||| ||||||| ||||    
T  11712164 cttccaaagaacaaaagactcaatgatttcactcatccaagatgtttacaaatg 11712217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 8965802 - 8965914
Alignment:
Q  195 cttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggtgttt 293  Q
    ||||||||| ||||  |||||||||||||||||||||| |||||| |||||||  || | |||||||| |||||||||  ||||| ||||||||||||||    
T  8965802 cttcaacaaactcataaagaacaaaccctaatttctacctttttcccaatctc-accaatgaacaagacactcaatgattttcactcacccaaggtgttt 8965900  T
Q  294 actaatgtttccca 307  Q
    || |||||||||||    
T  8965901 acaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 308
Target Start/End: Complemental strand, 7597710 - 7597559
Alignment:
Q  156 ttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaag 255  Q
    |||||||||||||||||||||| | ||        ||||||||||||||||| | ||||||||| ||| |||| | |  ||||  ||||||||||| |||    
T  7597710 ttctttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaag 7597611  T
Q  256 aacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaa 308  Q
    ||||| |||||||||| |||||| ||| |||||| ||||| ||||||||||||    
T  7597610 aacaaaagactcaatg-attcactcactcaaggtatttacaaatgtttcccaa 7597559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 10240259 - 10240139
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||||||||||||||||| ||| ||||||        |||| |||||||||||||| |||||||||||| ||||||||  ||| || ||||||    
T  10240259 atcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttctatctttgtcccaatct 10240160  T
Q  247 cttcctaagaacaagagactc 267  Q
    | ||| |||||||||||||||    
T  10240159 cctcccaagaacaagagactc 10240139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 30291668 - 30291549
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |  |||||||||||||  || | |||||||| |||||||||  ||||  |||||||||    
T  30291668 ttagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttcaatcacccaagg 30291570  T
Q  289 tgtttactaatgtttcccaac 309  Q
    ||||||| |||||||||||||    
T  30291569 tgtttacaaatgtttcccaac 30291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 27811339 - 27811222
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  ||||| |||||||  || | |||||||| |||||||||  ||||| |||||||||    
T  27811339 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctc-accaatgaacaagacactcaatgattttcactcacccaagg 27811242  T
Q  289 tgtttactaatgtttcccaac 309  Q
    ||||||| ||||||| |||||    
T  27811241 tgtttac-aatgttttccaac 27811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 40321137 - 40321013
Alignment:
Q  195 cttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtt 292  Q
    ||||||||||||||| | |||||| |||||||||||||   ||||| |||||||  |||| |||||||| ||||||||| || ||  ||| |||||||||    
T  40321137 cttcaacaagctcacaatgaacaa-ccctaatttctacccattttcccaatctca-cctatgaacaagacactcaatgattttcagtcactcaaggtgtt 40321040  T
Q  293 tactaatgtttcccaactcaacagaacc 320  Q
    ||| ||||||||||||||||| ||||||    
T  40321039 tac-aatgtttcccaactcaagagaacc 40321013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 1292570 - 1292697
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| ||||||||| | ||||||||| |  |||||||||||||  || |||||||||| ||||||| |  ||||| |||||||||    
T  1292570 ttagcttcaacaagctcacaaagaacaaa-cttaatttctacccattttctcaatctc-accaaagaacaagacactcaataattttcactcacccaagg 1292667  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    |||| || | ||||||||||| ||| |||||    
T  1292668 tgttcac-agtgtttcccaacccaaaagaac 1292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 4731719 - 4731592
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||| |||||||||||||| |||| ||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  4731719 ttaggttcaacaagctcacaaagagcaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 4731622  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  4731621 tgtttac-aatgtttcccaacccaagagaac 4731592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 41364954 - 41365081
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||| ||||| ||||||||||| |||||||||| | ||||| |||||||   ||  |||||||| ||||||||| || ||| |||||||||    
T  41364954 ttagcttaaacaaactcacaaagaacaaacc-taatttctaccaattttcccaatctcagtctt-gaacaagacactcaatgattttcactcacccaagg 41365051  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  41365052 tgtttac-aatgtttcccaacccaaaagaac 41365081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 43036484 - 43036357
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||| ||||||||| |||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  43036484 ttagtttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 43036387  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  43036386 tgtttac-aatgtttcccaacccaagagaac 43036357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 38863909 - 38863805
Alignment:
Q  214 aacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaa 313  Q
    |||||| ||||||||||||  ||| |  |||||||| | |||||||||||||||||||| || || |  ||||| ||||||| ||||||||||||| |||    
T  38863909 aacaaaacctaatttctaccatttccctaatctctttccaagaacaagagactcaatgattttactc-tccaagatgtttacaaatgtttcccaacccaa 38863811  T
Q  314 cagaac 319  Q
     |||||    
T  38863810 gagaac 38863805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 1822353 - 1822313
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta 231  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  1822353 ttagcttcaacaagctcacaaagaacaaaccataatttcta 1822313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 1856798 - 1856758
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta 231  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  1856798 ttagcttcaacaagctcacaaagaacaaaccataatttcta 1856758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 8965580 - 8965624
Alignment:
Q  29 caacaacaacaataacaaatctagatataatcttggaatcaagtg 73  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||    
T  8965580 caacaacaacaataacaaacctagatttaatctaggaatcaagtg 8965624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 5689269 - 5689204
Alignment:
Q  255 gaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    |||||||| ||||||||| || ||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  5689269 gaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccaaactcaagagaacc 5689204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 30143401 - 30143361
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  30143401 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 30143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 42435098 - 42435138
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  42435098 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 42435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32902055 - 32902122
Alignment:
Q  1 actaatatcaaagtaacctcaaacaaaccaacaacaacaataacaaatctagatataatcttggaatcaagtg 73  Q
    ||||||||||||| ||||||||||||     ||||||||| |||||| |||||| |||||| |||| ||||||    
T  32902055 actaatatcaaagcaacctcaaacaa-----caacaacaacaacaaacctagatctaatctaggaaccaagtg 32902122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 3326020 - 3325847
Alignment:
Q  145 ccatcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaat 244  Q
    |||||| | ||||||||||||||||||||| |||||||        |||||||||||||||||   ||||||||| | |||||||||| ||||| |||||    
T  3326020 ccatcattgagttctttacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaac-taatttctacctttttttcaat 3325922  T
Q  245 ctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
     ||||||||||||||||| || |||||  ||||| |||||||||||||||| |||||||| |||||||| |||||    
T  3325921 ttcttcctaagaacaagatacccaatggtttcactcacccaaggtgtttacaaatgtttctcaactcaagagaac 3325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 324
Target Start/End: Original strand, 13695761 - 13695931
Alignment:
Q  154 agttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttccta 253  Q
    |||||||||||||||||||||||| ||||        ||||||| ||||||||||| |||||||||||||||||| |||  ||||| ||||||| ||| |    
T  13695761 agttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctc-tccaa 13695859  T
Q  254 agaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaacctctc 324  Q
    |||| |||| |||||||||  ||||| ||| |||||||||||| ||||||| ||| ||||| | ||||||||    
T  13695860 agaaaaagatactcaatgattttcactcacacaaggtgtttacaaatgttttccagctcaataaaacctctc 13695931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 35616274 - 35616110
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||||||| |||||||| ||||        ||| ||| ||| ||||| | ||||||||||| ||||||||||   |||||||||||    
T  35616274 atcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacc-taatttctactcatttctcaatct 35616176  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaa-tgtttcccaactc 311  Q
    |||||   |||||||||||||||||| ||||| |||||||||||||| |||| ||||||| |||||    
T  35616175 cttcccgtgaacaagagactcaatgatttcactcacccaaggtgtttcctaattgtttccaaactc 35616110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 284
Target Start/End: Complemental strand, 316867 - 316731
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||||||||||||||||||||||| | ||        ||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||    
T  316867 atcaatgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacc-taatttctacctttttctcaatct 316769  T
Q  247 cttcctaagaacaagagactcaatgaattcacccaccc 284  Q
     ||||    |||||||||| |||||| ||||| |||||    
T  316768 tttcccctaaacaagagacccaatgatttcactcaccc 316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 16641046 - 16641167
Alignment:
Q  193 agcttcaacaagctcacgaagaacaaaccctaatttctac---atttttctcaatctcttcctaagaacaagagactcaatgaa-ttcacccacccaagg 288  Q
    ||||||||||||||||| |||||||||| |||||||||||    ||||||||||||||  || | |||||||| ||| |||||| ||||| ||| |||||    
T  16641046 agcttcaacaagctcacaaagaacaaacactaatttctaccatttttttctcaatctc-gccaatgaacaagacacttaatgaatttcactcactcaagg 16641144  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| |||||| ||||||||    
T  16641145 tgtttacaaatgttccccaactc 16641167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 19806443 - 19806318
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaagg 288  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||  ||||||| |||||||  || | |||||||| ||||||||| ||||| |||||||||    
T  19806443 ttagcttcaacaaactcacaaagaacaa--cctaatttctacccatttttc-caatctca-ccaatgaacaagacactcaatgatttcactcacccaagg 19806348  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  19806347 tgtttac-aatgtttcccaacccaagagaac 19806318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 286
Target Start/End: Original strand, 10054880 - 10055017
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||| |||||||||||||||||| ||||        ||||||||||||| |||   ||||||||||  ||||||||||   |||||||||||    
T  10054880 atcaatgagttcattacaaagagatacaaaa-ggttataagaaattagcttcaacaaactcttcaagaacaaaca-taatttctacccatttctcaatct 10054977  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaa 286  Q
    ||| ||| |||||| ||||||||||| |||||||||||||    
T  10054978 ctttctatgaacaatagactcaatgatttcacccacccaa 10055017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 10700755 - 10700872
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||||||||||| | ||||||||| |||||||||||| |||||  |||||| ||   | |||||| | |||||||||  ||||| ||||||||||    
T  10700755 ttagcttcaacaagctctctaagaacaaa-cctaatttctaccttttttccaatctattttcatgaacaaaatactcaatgattttcacgcacccaaggt 10700853  T
Q  290 gtttactaa-tgtttccca 307  Q
    |||| |||| |||||||||    
T  10700854 gtttcctaattgtttccca 10700872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 13239812 - 13239686
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    |||||||||||||| |||| ||||| ||||||||||||||| |||||||  |||||||  || | |||||||| |||||||||  ||||| || ||||||    
T  13239812 ttagcttcaacaagttcacaaagaa-aaaccctaatttctaccattttttccaatctc-accaatgaacaagacactcaatgattttcactca-ccaagg 13239716  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  13239715 tgtttac-aatgtttcccaacccaagagaac 13239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 40147322 - 40147203
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||||||||||||||| |||||||||||||| |  ||||| |||||||  || | |||||||| |||| |||| || ||| | |||||||    
T  40147322 ttagcttcaacaagctcacgaagaac-aaccctaatttctacccattttcccaatctc-accaatgaacaagacactc-atgatttccactctcccaagg 40147226  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  40147225 tgtttacaattgtttcccaactc 40147203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 319
Target Start/End: Complemental strand, 25412864 - 25412696
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||| |||||||||||||||| ||||        |||||||  ||||| |||| |||||||| |||||||||||||  ||||| ||||||    
T  25412864 atcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccttttcccaatct 25412767  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |  || | |||||||| |||||||||  ||||| || ||||||||||||| ||||||||||||| ||| |||||    
T  25412766 c-accaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaagagaac 25412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 330
Target Start/End: Complemental strand, 5007612 - 5007473
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtg 290  Q
    ||||||| ||||||||| | ||||| ||| |||||||||||   ||||  || || ||||| || ||||| |||||||| |  ||||| |||| ||||||    
T  5007612 ttagctttaacaagctctccaagaataaaacctaatttctatccttttaacattcacttccgaataacaatagactcaaagctttcactcacctaaggtg 5007513  T
Q  291 tttactaatgtttcccaactcaacagaacctctccaaaga 330  Q
    ||||| ||| | |  |||||||| |||||||| |||||||    
T  5007512 tttacaaatatgtttcaactcaagagaacctcaccaaaga 5007473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 182
Target Start/End: Complemental strand, 30793241 - 30793206
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggtt 182  Q
    |||||| |||||||||||||||||||||||||||||    
T  30793241 atcaattagttctttacaaagagatacaaaatggtt 30793206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 42426342 - 42426458
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||  |||| |||||||| |||||||||||||   |||||||||||||  || | |||||||| ||||||| | || ||| |||||||||    
T  42426342 ttagcttcaacaatttcacaaagaacaa-ccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaataattttcactcacccaagg 42426439  T
Q  289 tgtttactaatgtttcccaa 308  Q
    ||||||| ||||||||||||    
T  42426440 tgtttac-aatgtttcccaa 42426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 38747066 - 38747026
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  38747066 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 38747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 42926893 - 42926838
Alignment:
Q  253 aagaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaa 308  Q
    |||||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||    
T  42926893 aagaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaa 42926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 324
Target Start/End: Original strand, 27506 - 27683
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    ||||||||||| ||||||||||||||||||   |||        |||||||||||||||||   ||||||||  | ||||||||||  ||||| ||||||    
T  27506 atcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatct 27605  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacctctc 324  Q
    |||||  |||||||||||||||| || ||||| || ||||||||||||| ||||||||||||||||| ||||||||||    
T  27606 cttccctagaacaagagactcaaagatttcactcatccaaggtgtttacaaatgtttcccaactcaagagaacctctc 27683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 211 - 318
Target Start/End: Original strand, 3904744 - 3904851
Alignment:
Q  211 aagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaact 310  Q
    ||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||  ||||    
T  3904744 aagaacaaaacctaatttctaccattttcccaatctcttcctaagaacaagagactcaatgatttcactcgcccaaggtgtttacaaatgtttcttaact 3904843  T
Q  311 caacagaa 318  Q
    ||| ||||    
T  3904844 caagagaa 3904851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 36146514 - 36146648
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||||||||| || ||||||| |||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  36146514 ttagcttcaacaagctcacaaataacaaactctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 36146612  T
Q  289 tgtttactaatgtttcccaactcaacagaacctctc 324  Q
    ||||||| ||||||||||||| ||| ||||||||||    
T  36146613 tgtttacaaatgtttcccaacccaagagaacctctc 36146648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 320
Target Start/End: Original strand, 4253592 - 4253765
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||||||| |||||||||| |||| ||||        ||||||||||||||||||| ||||||||||||||||||||||  ||||  |||| |    
T  4253592 atcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctaccattttaccaattt 4253691  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    |  || | |||||||| |||||||||  ||||| |||| ||||||||||| ||||||| ||||| ||| ||||||    
T  4253692 c-accaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaacccaagagaacc 4253765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 333
Target Start/End: Complemental strand, 26639352 - 26639240
Alignment:
Q  221 cctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||||||||  ||||| ||||||||||| || || |||||||||||||| || || |||| || |||||||| ||||||||||||| ||| ||||||    
T  26639352 cctaatttctaccattttcacaatctcttcccaaaaagaagagactcaatgattttactcacctaaagtgtttacaaatgtttcccaacgcaagagaacc 26639253  T
Q  321 tctccaaagaact 333  Q
     ||| | ||||||    
T  26639252 gctcaagagaact 26639240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 18396374 - 18396247
Alignment:
Q  196 ttcaacaagctcacgaagaacaaaccctaatttctacatttttct---caatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtt 292  Q
    |||||||| ||| | ||||||||| |||||||||||| ||||| |   ||||||||||  ||||||||  |||||||  | ||||| |||||||||||||    
T  18396374 ttcaacaaactctccaagaacaaaacctaatttctacttttttttttccaatctcttctcaagaacaatggactcaacaatttcactcacccaaggtgtt 18396275  T
Q  293 tactaatgtttcccaactcaacagaacc 320  Q
    ||| ||||||||  ||||||| ||||||    
T  18396274 tacaaatgtttcataactcaaaagaacc 18396247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 5514116 - 5514243
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||||||||||||| ||||||||| | ||||||||||  |||| |||||||| ||  | |||||||| |||||||||  ||||| || | |||||    
T  5514116 ttagcttcaacaagctcacaaagaacaaaacataatttctactcttttttcaatctc-tcaaatgaacaagaaactcaatgattttcactcatcgaaggt 5514214  T
Q  290 gtttactaatgtttcccaactcaacagaa 318  Q
    |||||| | ||||||||||| ||| ||||    
T  5514215 gtttacaagtgtttcccaacccaagagaa 5514243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 293
Target Start/End: Original strand, 1360263 - 1360361
Alignment:
Q  194 gcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 293  Q
    ||||||||||| || | |||| |||| |||||||||||| |||||| ||||||| | | | |||||||||||||||||| ||||| |||| |||||||||    
T  1360263 gcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgttt 1360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 41317541 - 41317669
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    |||||||  |||||||||| |||||||| ||||||||||||| | ||||| |||||||  || | ||||||||||||||||||  ||||| || ||||||    
T  41317541 ttagctttgacaagctcacaaagaacaa-ccctaatttctaccaattttcccaatctca-ccaatgaacaagagactcaatgattttcactcatccaagg 41317638  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  41317639 tgtttac-aatgtttcccaacccaagagaacc 41317669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 1113718 - 1113591
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  |||||||||||||  |  | |||||||| |||||||||  ||||| ||||||||     
T  1113718 ttagcttcaacaagctcacaaagaac-aaccctaatttctatccattttctcaatctc-acaaatgaacaagacactcaatgattttcactcacccaagt 1113621  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  1113620 tgtttac-aatgtttcccaacccaagagaac 1113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 4586222 - 4586095
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||| |||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  4586222 ttagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgatttacactcacccaagg 4586125  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  4586124 tgtttac-aatgtttcccaacccaagagaac 4586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 5116709 - 5116564
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||||||||||||||||||||||| | ||        ||| ||||||||| ||  | ||||||||||| ||||||||||  |||||  |||||    
T  5116709 atcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaacc-taatttctactcttttcctaatct 5116611  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 293  Q
    | ||| |  ||||||||||||||||| ||||||| ||||| ||||||    
T  5116610 cctcccataaacaagagactcaatgatttcacccgcccaatgtgttt 5116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 31733076 - 31733203
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||| ||||||||| |||||||| |||||||||||||   |||||||| ||||  || | |||||||| ||||||||| || ||| |||||||||    
T  31733076 ttagcttcaccaagctcacaaagaacaa-ccctaatttctacccattttctcagtctca-ccaatgaacaagacactcaatgattttcactcacccaagg 31733173  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  31733174 tgtttac-aatgtttcccaacccaagagaac 31733203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 47674050 - 47674177
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    |||||||||||||| |||| |||||| |||||||||||||| |  |||||||||||||  || | |||||||| |||||||||  ||||| |||||||||    
T  47674050 ttagcttcaacaagttcacaaagaac-aaccctaatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttcactcacccaagg 47674147  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||| ||||| ||| |||||    
T  47674148 tgtttac-aatgttttccaacccaagagaac 47674177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 23555101 - 23554974
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    |||||||||||||| |||| |||||| |||||||||||||||   |||||| |||||||  || | |||||||| |||||||||  ||||| || |||||    
T  23555101 ttagcttcaacaagttcacaaagaac-aaccctaatttctaccattttttcccaatctc-accaatgaacaagacactcaatgattttcactca-ccaag 23555005  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||||||| |||||    
T  23555004 gtgtttac-aatgtttcccaactcaagagaac 23554974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 43864305 - 43864178
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    |||||||||||||| |||| |||||||| |||||||||||||  | ||||| |||||||  || | |||||||| ||||||||| || ||| ||||||||    
T  43864305 ttagcttcaacaagttcacaaagaacaa-ccctaatttctacccacttttc-caatctca-ccaatgaacaagacactcaatgattttcactcacccaag 43864209  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  43864208 gtgtttac-aatgtttcccaacccaagagaac 43864178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 30024839 - 30024943
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| | |||| |||||||||||||| |  |||||||||||||  || | |||||||| |||||||||  ||||| |||||||||    
T  30024839 ttagcttcaacaagctcacaatgaac-aaccctaatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttcactcacccaagg 30024936  T
Q  289 tgtttac 295  Q
    |||||||    
T  30024937 tgtttac 30024943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 47676243 - 47676370
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||  |||| |||||||| |||||||||||||   |||||||||||||  || | |||||||| ||||| ||| || ||| |||||||||    
T  47676243 ttagcttcaacaaattcacaaagaacaa-ccctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgattttcactcacccaagg 47676340  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  47676341 tgtttac-aatgtttcccaacccaagagaac 47676370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 22328498 - 22328538
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta 231  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  22328498 ttagcttcaacaagctcacaaagaacaaactctaatttcta 22328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 12097970 - 12098098
Alignment:
Q  195 cttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtt 292  Q
    ||||||||||||||| | |||||| |||||||||||||   ||||| ||||||   || | |||||||| ||||||||| || ||| |||||||| ||||    
T  12097970 cttcaacaagctcacaatgaacaa-ccctaatttctacccattttcccaatctaa-ccaatgaacaagacactcaatgattttcactcacccaagatgtt 12098067  T
Q  293 tactaatgtttcccaactcaacagaacctctc 324  Q
    ||| ||||||||||||| ||| ||||||||||    
T  12098068 tac-aatgtttcccaacccaagagaacctctc 12098098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 2361079 - 2361198
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  ||||| |||||||  || | |||||||| |||| ||||  ||||| | |||||||    
T  2361079 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctc-accaatgaacaagacactc-atgattttcactctcccaagg 2361175  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  2361176 tgtttacaattgtttcccaactc 2361198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 14069940 - 14070067
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctaca-tttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  ||||| |||| |||||||| |||||||||||||  |||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  14069940 ttagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 14070037  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| |||||| |||||| ||| |||||    
T  14070038 tgtttac-aatgttacccaacccaagagaac 14070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 14379968 - 14380095
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctaca-tttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  ||||| |||| |||||||| |||||||||||||  |||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  14379968 ttagctttgacaagttcacaaagaacaa-ccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 14380065  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| |||||| |||||| ||| |||||    
T  14380066 tgtttac-aatgttacccaacccaagagaac 14380095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 31518855 - 31518728
Alignment:
Q  192 tagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||| |||||||| ||||||||| |||||||||||| | ||||| |||||||  || | |||||||| |||| ||||  ||||| ||||||||||    
T  31518855 tagcttcaataagctcacaaagaacaaa-cctaatttctacctattttcccaatctc-accaatgaacaagacactcgatgattttcactcacccaaggt 31518758  T
Q  290 gtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||  |||||| ||||| ||| ||||||    
T  31518757 gtttac-gatgttttccaacccaaaagaacc 31518728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 2390343 - 2390303
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  2390343 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 2390303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 22270034 - 22269994
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  22270034 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 22269994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 23344036 - 23343995
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||    
T  23344036 ttagcttcaacaagctcacaaagaataaaccttaatttctac 23343995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 29608798 - 29608758
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  29608798 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 29608758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 48599441 - 48599481
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  48599441 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 48599481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 30843366 - 30843469
Alignment:
Q  218 aaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacc-cacccaaggtgtttactaatgtttcccaactcaacag 316  Q
    ||||||||||| ||| |||| |||||||||| || | |||||||| ||||||||| || | | || | ||||||||||| |||||||| |||| ||| ||    
T  30843366 aaccctaatttataccttttactcaatctct-ccaatgaacaagatactcaatgattttaactcatctaaggtgtttacaaatgtttctcaacccaagag 30843464  T
Q  317 aacct 321  Q
    |||||    
T  30843465 aacct 30843469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 320
Target Start/End: Complemental strand, 4045528 - 4045355
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| |||| |||||||||||||| |||||| ||        ||||||||||||||||||  ||||||||||||||||||||||  ||||| ||||||    
T  4045528 atcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttctaccattttcccaatct 4045429  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    | ||| |  ||||||| |||||||||  ||||| ||||| |||||||||| ||||||||||||||||| ||||||    
T  4045428 c-tccaataaacaagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaactcaagagaacc 4045355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 25073673 - 25073509
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||| |||||||||||| ||||         |||||| ||||||||||||||||| ||| | ||||||||||  |||| |||||||    
T  25073673 atcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatc-taatttctaccattttttcaatct 25073575  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaa-tgtttcccaactc 311  Q
    | ||| | |||||||| ||||||||| ||||| |||||||| ||||| | || |||||||||||||    
T  25073574 cctcccatgaacaagatactcaatgatttcactcacccaagatgtttcccaattgtttcccaactc 25073509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 9183138 - 9183255
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||  |||| |||||||| |||||||||||||   |||||||||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  9183138 ttagcttcaacaaattcacaaagaacaa-ccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 9183235  T
Q  289 tgtttactaatgtttcccaac 309  Q
    ||||||| |||||||||||||    
T  9183236 tgtttac-aatgtttcccaac 9183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 3039010 - 3039142
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||| |||||||| | |||||| ||||||||||||| | ||||| |||||||  || | |||||||| | ||||||| || ||| ||| |||||    
T  3039010 ttagcttcaaaaagctcacaatgaacaa-ccctaatttctaccaattttcccaatctca-ccaatgaacaagacattcaatgattttcactcactcaagg 3039107  T
Q  289 tgtttactaatgtttcccaactcaacagaacctctc 324  Q
    ||||||| ||||||||||||| ||| ||||||||||    
T  3039108 tgtttac-aatgtttcccaacccaagagaacctctc 3039142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 28137515 - 28137642
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||||||||| |||||||| |||||||||||||   ||||| || ||||  || | |||||||| ||||||||| || ||| |||||||||    
T  28137515 ttagcttaaacaagctcacaaagaacaa-ccctaatttctacccattttcccattctca-ccaatgaacaagacactcaatgattttcactcacccaagg 28137612  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  28137613 tgtttac-aatgtttcccaacccaagagaac 28137642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 26954393 - 26954509
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||||||||||||| |||||| ||||||||||| |||   |||| |||||||  | || |||||||| |||||||||  ||||| | || |||||    
T  26954393 ttagcttcaacaagctcacaaagaac-aaccctaatttataccaatttcccaatctc-acatatgaacaagacactcaatgattttcactccccaaaggt 26954490  T
Q  290 gtttactaatgtttcccaac 309  Q
    |||||| |||||||||||||    
T  26954491 gtttac-aatgtttcccaac 26954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 21593725 - 21593606
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  ||||| |||||||  || | |||||||| |||| ||||  ||||| | |||||||    
T  21593725 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctc-accaatgaacaagacactc-atgattttcactctcccaagg 21593629  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  21593628 tgtttacaattgtttcccaactc 21593606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 2973046 - 2973086
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  2973046 ttagcttcaacaagctcacaaagaacaaa-cctaatttctac 2973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 5043688 - 5043648
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  5043688 ttagcttcaacaagctcacaaagaacaaa-cctaatttctac 5043648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 16569095 - 16569054
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||    
T  16569095 ttagcttaaacaagctcacaaagaacaaaacctaatttctac 16569054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 17758084 - 17758044
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  17758084 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 17758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 17763051 - 17763011
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  17763051 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 17763011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 21588992 - 21588952
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  21588992 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 21588952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 24435839 - 24435799
Alignment:
Q  281 acccaaggtgtttactaatgtttcccaactcaacagaacctc 322  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  24435839 acccaaggtgtttac-aatgtttcccaactcaagagaacctc 24435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 26830230 - 26830350
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    ||||||||||||||||||| |||||| ||| ||||||||||  |||||||| |||||||  || | |||||||| |||| ||||  ||||| | ||||||    
T  26830230 ttagcttcaacaagctcacaaagaac-aactctaatttctacccatttttc-caatctcacccaatgaacaagacactc-atgattttcactctcccaag 26830326  T
Q  288 gtgtttactaatgtttcccaactc 311  Q
    |||||||| | ||||| |||||||    
T  26830327 gtgtttacaattgttttccaactc 26830350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 1313912 - 1314029
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtg 290  Q
    ||||||| ||||||||| | ||||||||| | |||||| |||  ||||||||||||||||  ||||| |||||||||||| | ||||| |||||||||||    
T  1313912 ttagctttaacaagctctccaagaacaaaacataatttttacccttttctcaatctcttctcaagaataagagactcaataatttcactcacccaaggtg 1314011  T
Q  291 tttactaatgtttcccaa 308  Q
    ||||| ||||||||||||    
T  1314012 tttacaaatgtttcccaa 1314029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 29196493 - 29196627
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  |||||||||| ||||||||||||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  29196493 ttagctttgacaagctcacaaagaacaaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 29196591  T
Q  289 tgtttactaatgtttcccaactcaacagaacctctc 324  Q
    ||||||| ||||||||||||| ||| ||||||||||    
T  29196592 tgtttacaaatgtttcccaacccaagagaacctctc 29196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 37761585 - 37761690
Alignment:
Q  199 aacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaa 298  Q
    ||||||| ||| ||||||||||| |||||| ||| ||||||||| |||||| | |||||||||||||| |||||||| || |  ||||||||||||| ||    
T  37761585 aacaagcccacaaagaacaaaccttaatttttacctttttctcattctctttccaagaacaagagacttaatgaatttactcgtccaaggtgtttacaaa 37761684  T
Q  299 tgtttc 304  Q
    ||||||    
T  37761685 tgtttc 37761690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 321
Target Start/End: Original strand, 8166520 - 8166695
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    ||||| ||||||||||||||||||||||||| ||||        ||| ||||||||| ||| | ||||||||||| ||||||||||   ||| |||||||    
T  8166520 atcaacaagttctttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacc-taatttctactcatttatcaatct 8166618  T
Q  247 cttcctaagaacaagagac--tcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaacct 321  Q
    ||||| | |||||||| ||  ||||||| || ||||||||||| |||||||| |||||||  |||||||| |||||||    
T  8166619 cttcc-atgaacaagacacactcaatgattttcacccacccaatgtgtttacaaatgtttttcaactcaagagaacct 8166695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 9666573 - 9666703
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||||| |||||||||  |||||||||||  ||||||| |||||||  |  | |||||||| ||||||||| || ||| ||||||||    
T  9666573 ttagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc-caatctca-caaatgaacaagacactcaatgattttcactcacccaag 9666670  T
Q  288 gtgtttactaatgtttcccaactcaacagaacc 320  Q
    |||||||| |||||||||||||| || ||||||    
T  9666671 gtgtttacaaatgtttcccaactgaagagaacc 9666703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 5433947 - 5434104
Alignment:
Q  155 gttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctc--aatctcttcct 252  Q
    |||||||||||||||||| |||| ||||        ||||||| ||||||||||| ||||||||||||||||||||||  |||||||  ||||||  ||     
T  5433947 gttctttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctca-cca 5434045  T
Q  253 aagaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactc 311  Q
    | |||||||| ||||||||| || ||| |||| ||||||||||| | |||||||||||||    
T  5434046 atgaacaagacactcaatgattttcactcacc-aaggtgtttacaattgtttcccaactc 5434104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 320
Target Start/End: Complemental strand, 32891165 - 32891036
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| ||||||||| | ||||||||| |  |||||||||||||  || |||||||||| |||||||||  || || |||||||||    
T  32891165 ttagcttcaacaagctcacaaagaacaaaacttaatttctacccattttctcaatctc-accgaagaacaagacactcaatgatttttactcacccaagg 32891067  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||| | ||| ||||||    
T  32891066 tgtttac-aatgtttcccaccccaagagaacc 32891036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 44700585 - 44700714
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||| ||||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  44700585 ttagcttcaacaaactcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 44700682  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  44700683 tgtttacaaatgtttcccaacccaagagaacc 44700714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 304
Target Start/End: Complemental strand, 33191935 - 33191780
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||||||| |||  ||||||||        ||||||||||||||||| | ||||||||| | || |||||||  ||||||||||||    
T  33191935 atcaatgagttctttacaaagacata--aaatggttacaagaacttagcttcaacaagctctctaagaacaaaacatagtttctactattttctcaatct 33191838  T
Q  247 cttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttc 304  Q
    ||| | || ||||||||||||||| | ||||  |||| ||  ||||||| ||||||||    
T  33191837 cttaccaataacaagagactcaattatttcaatcacctaatatgtttacaaatgtttc 33191780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 321
Target Start/End: Complemental strand, 5373336 - 5373155
Alignment:
Q  149 caataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatct 246  Q
    |||| ||||| ||||||||||||| |||| ||||        ||||||||||||||||||  ||||||||| |||||||||||  | |||||| ||||||    
T  5373336 caatgagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctacccttttttcccaatct 5373237  T
Q  247 cttcctaagaacaagagactcaatgaat-----tcacccaccc---aaggtgtttactaatgtttcccaactcaacagaacct 321  Q
    ||| | | |||||||| ||||||||| |     ||||||||||   ||||||||||| ||||||||||||| ||| |||||||    
T  5373236 ctt-caatgaacaagacactcaatgattttccctcacccacccaataaggtgtttaccaatgtttcccaacccaagagaacct 5373155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 320
Target Start/End: Complemental strand, 31314506 - 31314378
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||| |||| | |||||| |||||||||||||   |||||||||||||  |||| |||||||| ||||||||| || ||| ||||||| |    
T  31314506 ttagcttcaacaagatcacaatgaacaa-ccctaatttctacccattttctcaatctca-cctatgaacaagacactcaatgattttcactcacccaaag 31314409  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  31314408 tgtttac-aatgtttcccaacccaagagaacc 31314378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 35138769 - 35138915
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||||||||||||||||  |||        ||| ||||||||| ||||| ||||||||||  ||||||||||   |||||||||||    
T  35138769 atcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaaca-taatttctacccatttctcaatct 35138867  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgttt 293  Q
    ||| | | |||||||| |||||||||  ||||| | ||||||||||||    
T  35138868 ctttccatgaacaagacactcaatgattttcactctcccaaggtgttt 35138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 5236563 - 5236690
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||| |||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  5236563 ttagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 5236660  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  5236661 tgtttac-aatgtttcccaacccaagagaac 5236690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 40734559 - 40734432
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||| |||||||||||||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  40734559 ttaggttcaacaagctcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 40734462  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  40734461 tgtttac-aatgtttcccaacccaagagaac 40734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 44331606 - 44331479
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||||| | |||||| |||||||||||||  ||||| || ||||||  || | |||||||| ||||||||| || ||| ||||||||    
T  44331606 ttagcttcaacaagctcacaatgaacaa-ccctaatttctacccattttcct-aatctca-ccaatgaacaagacactcaatgattttcactcacccaag 44331510  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  44331509 gtgtttac-aatgtttcccaacccaagagaac 44331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 46860535 - 46860414
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatgaa--ttcacccacccaag 287  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |  |||||||||||||  || | |||||||| ||||| ||||  ||||| | ||||||    
T  46860535 ttagcttcaacaagctcacaaagaacaaa-cctaatttctacccattttctcaatctc-accaatgaacaagacactcattgaattttcactctcccaag 46860438  T
Q  288 gtgtttactaatgtttcccaactc 311  Q
    |||||||| | |||||| ||||||    
T  46860437 gtgtttacaattgtttctcaactc 46860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 40735487 - 40735364
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatc 245  Q
    |||||| ||||||| ||||||||||||||| |||||        ||||||||||||||||||| |||||| |||||||||||||| |  |||||||||||    
T  40735487 atcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttctcaatc 40735390  T
Q  246 tcttcctaagaacaagagactcaatga 272  Q
    ||  || | |||||||| |||||||||    
T  40735389 tc-accaatgaacaagacactcaatga 40735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 319
Target Start/End: Complemental strand, 45095267 - 45095099
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||| |||||||||||||||| ||||        |||||||  ||||| |||| |||||||| |||||||||||||  ||||| ||||||    
T  45095267 atcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttcccaatct 45095170  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |  || | |||||||| |||||||||  ||||| || ||||||||||||| ||||||||||||| ||| |||||    
T  45095169 c-accaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaagagaac 45095099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 54739060 - 54739117
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctct 248  Q
    |||| |||||||||||||| |||||||||| |||||||||||  |||| |||||||||    
T  54739060 ttagtttcaacaagctcacaaagaacaaacactaatttctaccattttttcaatctct 54739117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 39127608 - 39127550
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttc 250  Q
    ||||||||||||||||||| ||||||||| | |||||| ||| | |||||||||||||||    
T  39127608 ttagcttcaacaagctcaccaagaacaaa-cataatttatacttatttctcaatctcttc 39127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 2020165 - 2020123
Alignment:
Q  236 tttctcaatctcttcctaagaacaagagactcaatgaattcac 278  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  2020165 tttctcaatctcttcccataaacaagagactcaatgaattcac 2020123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 4570013 - 4569893
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||| |||||||| | |||||| |||||||||||||   ||||| |||||||  || |||||||| | ||||||||| || ||| |||||||||    
T  4570013 ttagcttcaataagctcacaatgaacaa-ccctaatttctacccattttcccaatctca-ccaaagaacaaaacactcaatgattttcactcacccaagg 4569916  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | ||||| |||||||    
T  4569915 tgtttacaattgttttccaactc 4569893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 51398875 - 51398758
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    |||||||||||||| |||| |||||| ||||||||||||||  |||||||| ||||||| | | | |||||||| |||||||||  ||||| || |||||    
T  51398875 ttagcttcaacaagttcactaagaac-aaccctaatttctacccatttttc-caatctcat-caatgaacaagacactcaatgattttcactcatccaag 51398779  T
Q  288 gtgtttactaatgtttcccaac 309  Q
    |||||||| ||| |||||||||    
T  51398778 gtgtttac-aatatttcccaac 51398758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 6794572 - 6794532
Alignment:
Q  281 acccaaggtgtttactaatgtttcccaactcaacagaacctc 322  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  6794572 acccaaggtgtttac-aatgtttcccaactcaagagaacctc 6794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 7762326 - 7762270
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctc 247  Q
    |||||||||||||| |||| |||||| |||||||||||||| | ||||||||||||||    
T  7762326 ttagcttcaacaagttcacaaagaac-aaccctaatttctaccctttttctcaatctc 7762270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 9581281 - 9581217
Alignment:
Q  255 gaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||    
T  9581281 gaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 9581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 30236186 - 30236146
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  30236186 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 30236146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 34491273 - 34491233
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  34491273 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 34491233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 43401909 - 43401949
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  43401909 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 43401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 46173418 - 46173378
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  46173418 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 46173378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 23392099 - 23392146
Alignment:
Q  274 ttcacccacccaaggtgtttactaatgtttcccaactcaacagaacctc 322  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||||||||    
T  23392099 ttcactcacccaaggtgtttac-aatgtttcccaacccaagagaacctc 23392146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 29682356 - 29682293
Alignment:
Q  256 aacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||    
T  29682356 aacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 29682293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 320
Target Start/End: Complemental strand, 6677565 - 6677401
Alignment:
Q  156 ttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaac-cctaatttctacatttttctcaatctcttcctaa 254  Q
    ||||||||||||| |||||||| ||||        ||||||||||||||||| | ||||| |||  ||||||||||||  ||||| |||| |||||| ||    
T  6677565 ttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaatttctaccattttc-caatttcttcccaa 6677467  T
Q  255 gaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    |||||||||||||||| | ||||| || |||| |||||||| ||||||||||||| ||| ||||||    
T  6677466 gaacaagagactcaattatttcactcatccaatgtgtttacaaatgtttcccaacccaagagaacc 6677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 21703947 - 21704030
Alignment:
Q  195 cttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcac 278  Q
    ||||||||||||  | ||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||| ||||| |||||    
T  21703947 cttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaatagacttaatgatttcac 21704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 36463496 - 36463628
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||||||||| | |||||  |||||||||||| |  ||||| |||||||  || | |||||||| |||||||||||| ||| |||||||||    
T  36463496 ttagcttcaacaagctcacaatgaacag-ccctaatttctatccattttcccaatctca-ccaatgaacaagacactcaatgaatttcactcacccaagg 36463593  T
Q  289 tgtttactaatgtttcccaactcaacagaacctctc 324  Q
    ||||||| ||||||||||||||||| ||||||||||    
T  36463594 tgtttac-aatgtttcccaactcaagagaacctctc 36463628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 37229832 - 37229962
Alignment:
Q  194 gcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtt 292  Q
    |||| ||||||||||| ||||||| ||||||||||||||  ||||| |||||||  || | |||||||| ||||| ||| || ||| |||||||||||||    
T  37229832 gctttaacaagctcacaaagaacacaccctaatttctaccattttcccaatctca-ccaatgaacaagacactcattgattttcactcacccaaggtgtt 37229930  T
Q  293 tactaatgtttcccaactcaacagaacctctc 324  Q
    ||| ||||||| ||||| ||| ||||||||||    
T  37229931 tacaaatgttttccaacccaagagaacctctc 37229962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 24969173 - 24969045
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||||| ||||||||| | ||||||||||  ||||||| |||||||  || ||||||||||  |||||||| || ||| ||||||||    
T  24969173 ttagcttcaacaagctcacaaagaacaaatc-taatttctacccatttttc-caatctca-ccaaagaacaagactctcaatgattttcactcacccaag 24969077  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  24969076 gtgtttacaaatgtttcccaacccaagagaac 24969045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 322
Target Start/End: Original strand, 6542286 - 6542418
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    |||| |||||||||||||| ||||||||| ||||||||||||   |||||| |||||||  || | |||||||| ||||||| |  ||||| ||||||||    
T  6542286 ttagtttcaacaagctcacaaagaacaaatcctaatttctaccattttttcccaatctc-cccaatgaacaagacactcaataattttcactcacccaag 6542384  T
Q  288 gtgtttactaatgtttcccaactcaacagaacctc 322  Q
    |||||||| ||||||||||||| ||| ||||||||    
T  6542385 gtgtttac-aatgtttcccaacccaagagaacctc 6542418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 38811340 - 38811399
Alignment:
Q  236 tttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttac 295  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||    
T  38811340 tttctcaatctctttctatgaacaagagactcaatgatttcactcacccaaggtgtttac 38811399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 44967939 - 44968050
Alignment:
Q  194 gcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 293  Q
    |||||| ||||||| | |||| |||| ||||||||||||  ||||| ||||||||||| |||||||| || |||||||| ||||| || ||||  |||||    
T  44967939 gcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctcttcccaagaacaacaggctcaatgatttcactcaaccaatttgttt 44968038  T
Q  294 actaatgtttcc 305  Q
    || |||||||||    
T  44968039 acaaatgtttcc 44968050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 5207949 - 5208066
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    |||||||||||||| |||| ||||||||||||||||||||||  ||||  ||||| | ||| | |||||||  ||| |||||  ||||| ||||||||||    
T  5207949 ttagcttcaacaagttcacaaagaacaaaccctaatttctaccctttttccaatcac-tccaatgaacaagtcactaaatgattttcactcacccaaggt 5208047  T
Q  290 gtttactaatgtttcccaa 308  Q
    |||||| ||||||||||||    
T  5208048 gtttacaaatgtttcccaa 5208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 5429740 - 5429613
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||||||||||||||| || |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  5429740 ttagcttcaacaagctcacgaagaataa-ccctaatttctactcattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 5429643  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  5429642 tgtttac-aatgtttcccaacccaagagaac 5429613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 33089983 - 33089859
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||| |||||||||||||||||        ||||||||||||||||| | ||||||||||  |||||||||    | |||||||||    
T  33089983 atcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaaca-taatttctattcatctctcaatct 33089885  T
Q  247 cttcctaagaacaagagactcaatga 272  Q
    ||||| | |||||||| |||||||||    
T  33089884 cttcccatgaacaagacactcaatga 33089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 47038517 - 47038643
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||||||||||||| |||||| |||||||||||||||   |||  |||||||  || | |||||||| |||||||||  ||||| ||||||||||    
T  47038517 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttccaatctc-accaatgaacaagacactcaatgattttcactcacccaaggt 47038614  T
Q  290 gtttactaatgtttcccaactcaacagaac 319  Q
    ||||| |||||||||||||| ||| |||||    
T  47038615 gttta-taatgtttcccaacccaagagaac 47038643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 48143104 - 48142976
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctc--aatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    |||||||||||||| |||| |||||||| ||||||||||||| ||||| ||  ||||||  || | |||||||| ||||||||| || ||| ||||||||    
T  48143104 ttagcttcaacaagttcacaaagaacaa-ccctaatttctacctttttttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaag 48143007  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  48143006 gtgtttac-aatgtttcccaacccaagagaac 48142976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 311
Target Start/End: Complemental strand, 12119637 - 12119479
Alignment:
Q  154 agttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcct 252  Q
    |||||||||||||||||||||||| ||||        |||||||||| ||| |||| ||||||||||| ||||||||||  |||||  |||||||  |||    
T  12119637 agttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctc-acct 12119539  T
Q  253 aagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactc 311  Q
    | |||||||| ||||| |||  ||||| | |||||||| ||||| | |||||||||||||    
T  12119538 atgaacaagacactcattgattttcactctcccaaggtatttacaattgtttcccaactc 12119479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 52467461 - 52467590
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||||||||| ||||||||||| ||||||||||   ||||| ||| |||  |  | |||||||| ||||||||| || ||| |||||||||    
T  52467461 ttagcttcaacaagctcacaaagaacaaacc-taatttctacccattttcccaacctca-caaatgaacaagacactcaatgattttcactcacccaagg 52467558  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  52467559 tgtttacaaatgtttcccaacccaagagaacc 52467590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 23042896 - 23043013
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggt 289  Q
    |||| ||||||||||||   || |||||| | |||||||||| |||| || ||||||||||| || ||||||||| ||||||| ||||  || |||||||    
T  23042896 ttagtttcaacaagctcttcaaaaacaaaacataatttctactatttgtc-caatctcttcccaaaaacaagagattcaatgatttcattcatccaaggt 23042994  T
Q  290 gtttactaatgtttcccaa 308  Q
    |||||| ||||||||||||    
T  23042995 gtttacaaatgtttcccaa 23043013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 26175743 - 26175870
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||| |||||||||||||| |||||||| ||||||||||| |   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  26175743 ttagtttcaacaagctcacaaagaacaa-ccctaatttctccccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 26175840  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| |||||||||    
T  26175841 tgtttac-aatgtttcccaacccaacagaac 26175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 320
Target Start/End: Original strand, 48142441 - 48142614
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||||||||||| | || ||||         |||||||||||||||||| |||||||||||||||||||||   | ||| ||||||    
T  48142441 atcaatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatct 48142540  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    | | | | |  ||||| |||||||||  ||||| ||||| | |||||||  ||||||||||||||||| ||||||    
T  48142541 cat-caatgggcaagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactcaagagaacc 48142614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 56178701 - 56178870
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatc 245  Q
    |||||| ||||||| |||||||||||||||| ||||        |||||||||||||| |||| |||||| |||||||||||||| | |||||| |||||    
T  56178701 atcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctaccctttttcccaatc 56178798  T
Q  246 tcttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    ||  || | |||||||| |||||||||  ||||| || ||||||||||||| ||||||||||||| ||| |||||    
T  56178799 tc-accaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaagagaac 56178870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 5871878 - 5871754
Alignment:
Q  194 gcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggtg 290  Q
    |||| ||||||||||| ||||||||| |||||||||||  |||||||| |||||||  || | |||||||| |||||||||  ||||| |||||||||||    
T  5871878 gcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttc-caatctc-accaatgaacaagacactcaatgattttcactcacccaaggtg 5871782  T
Q  291 tttactaatgtttcccaactcaacagaac 319  Q
    ||||| ||||||||||||| ||| |||||    
T  5871781 tttac-aatgtttcccaacccaagagaac 5871754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 34112922 - 34112775
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttct--caat 244  Q
    |||||| |||||||||||||||||| ||||| ||||        ||||||||||||||||| |  |||||||||  |||||||||| ||||| |  ||||    
T  34112922 atcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaaca-taatttctactttttttttccaat 34112824  T
Q  245 ctcttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 293  Q
    ||||||| | | |||| || |||||||| ||||||| ||||| ||||||    
T  34112823 ctcttcccatgtacaaaaggctcaatgatttcacccgcccaatgtgttt 34112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 26699513 - 26699585
Alignment:
Q  154 agttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaat 226  Q
    ||||||||||||||||||||||||  |||        ||||||||||||||||||| ||||||||||||||||    
T  26699513 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaaccctaat 26699585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 293
Target Start/End: Complemental strand, 32091584 - 32091438
Alignment:
Q  146 catcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatc 245  Q
    |||||||  |||||||||||||||||||||||  |||        |||| |||||||| ||| | ||||||||||| |||||||||   ||||| |||||    
T  32091584 catcaatgtgttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacc-taatttctagcattttcccaatc 32091486  T
Q  246 tcttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 293  Q
    |  ||| | |||||||||||||||||| ||| | ||||||| ||||||    
T  32091485 ttctcccatgaacaagagactcaatgatttcgctcacccaatgtgttt 32091438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 34570521 - 34570648
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    |||||||||||||| |||| |||||| ||||||||||||||| | ||||| |||||||  || | |||||||| |||||||||  ||||| ||||||||     
T  34570521 ttagcttcaacaagttcacaaagaac-aaccctaatttctacctattttcccaatctc-accaatgaacaagacactcaatgattttcactcacccaaga 34570618  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||| | ||||||||||||| ||| |||||    
T  34570619 tgttttc-aatgtttcccaacccaagagaac 34570648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 55085472 - 55085591
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggt 289  Q
    ||||||||||||||||||| |||||| |||| |||||||||| | |||  |||||||  || | |||||||| | |||||||  ||||| ||||||||||    
T  55085472 ttagcttcaacaagctcacaaagaac-aaccttaatttctacctattttccaatctc-accaatgaacaagacagtcaatgattttcactcacccaaggt 55085569  T
Q  290 gtttactaatgtttcccaactc 311  Q
    |||||| | ||||||| |||||    
T  55085570 gtttacaattgtttccgaactc 55085591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 379441 - 379320
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatgaa--ttcacccacccaag 287  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |  |||||||||||||  |  | |||||||| ||| | ||||  ||||| | ||||||    
T  379441 ttagcttcaacaagctcacaaagaacaaa-cctaatttctacccattttctcaatctc-acaaatgaacaagatactaattgaattttcactctcccaag 379344  T
Q  288 gtgtttactaatgtttcccaactc 311  Q
    |||||||| | |||||||||||||    
T  379343 gtgtttacaattgtttcccaactc 379320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 21688310 - 21688190
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    |||| |||||||||||||| |||||| ||||||||||||||  ||||||||||||||||  || | |||||||| |||| ||||  ||||| | ||||||    
T  21688310 ttagtttcaacaagctcacaaagaac-aaccctaatttctacccatttttctcaatctc-accgatgaacaagacactc-atgattttcactcccccaag 21688214  T
Q  288 gtgtttactaatgtttcccaactc 311  Q
    |||||||  | |||||||||||||    
T  21688213 gtgtttagaattgtttcccaactc 21688190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 13009549 - 13009665
Alignment:
Q  202 aagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtttactaat 299  Q
    |||||||||||||||||||| ||||||||||   ||||| |||||||  |  | |||||||| ||||||||| || ||| |||||||||||||||| |||    
T  13009549 aagctcacgaagaacaaacc-taatttctacccattttcacaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aat 13009645  T
Q  300 gtttcccaactcaacagaac 319  Q
    |||||||||| ||| |||||    
T  13009646 gtttcccaacccaagagaac 13009665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 322
Target Start/End: Complemental strand, 51337116 - 51336995
Alignment:
Q  202 aagctcacgaagaacaaaccc-taatttctaca-tttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtttactaa 298  Q
    |||||||| ||||||||| || ||||||||||  ||||||||||||||  || | ||||| || ||||||||| || ||| |||||||||||||||| ||    
T  51337116 aagctcacaaagaacaaatccgtaatttctaccctttttctcaatctca-ccaatgaacaggacactcaatgattttcactcacccaaggtgtttac-aa 51337019  T
Q  299 tgtttcccaactcaacagaacctc 322  Q
    ||||| ||||| ||| ||||||||    
T  51337018 tgttttccaacccaagagaacctc 51336995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 2209818 - 2209734
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatgg-ttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    |||||| ||||||| ||||||||||||||||||| ||        ||||||||||||||||||| ||||| ||||||||||||||||    
T  2209818 atcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaccctaatttctac 2209734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 27417072 - 27417113
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctaca 233  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  27417072 ttagcttcaacaagctcacaaagaac-aaccctaatttctaca 27417113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 31474212 - 31474096
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||| ||||  ||||||||  ||||||||||| |  |||||||||||||  || | |||||||| |||||||||  ||||| ||||||| |    
T  31474212 ttagcttcaacaaactcaaaaagaacaagacctaatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttcactcacccaaag 31474114  T
Q  289 tgtttactaatgtttccca 307  Q
    ||||||| |||||||||||    
T  31474113 tgtttac-aatgtttccca 31474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 52095469 - 52095596
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  ||||| |||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  52095469 ttagctttgacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 52095566  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  52095567 tgtttac-aatgtttcccaacccaagagaac 52095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 12073453 - 12073413
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  12073453 ttagcttcaacaagctcacaaagaacaaa-cctaatttctac 12073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 309
Target Start/End: Complemental strand, 29056411 - 29056301
Alignment:
Q  199 aacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaa-gaacaagagactcaatgaattc-acccacccaaggtgtttact 296  Q
    ||||||| ||| |||||||||| |||||| ||||  ||||| ||||||||  |||| |||||| | ||||||||| ||  || |||||||||||||| |     
T  29056411 aacaagcacacaaagaacaaactctaattcctaccattttcccaatctct--ctaatgaacaaaacactcaatgatttttactcacccaaggtgtttcca 29056314  T
Q  297 aatgtttcccaac 309  Q
    |||||||||||||    
T  29056313 aatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 39774173 - 39774133
Alignment:
Q  281 acccaaggtgtttactaatgtttcccaactcaacagaacctc 322  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  39774173 acccaaggtgtttac-aatgtttcccaactcaagagaacctc 39774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 928083 - 928211
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||  |||| ||  || |||||||||| ||||| |||  ||||| |||||||||    
T  928083 ttagcttcaacaagctcacaaagaacaaaccctaatttctatcattttttccaatatc-accaaagaacaagacactcattgattttcactcacccaagg 928181  T
Q  289 tgtttactaatgtttcccaactcaacagaa 318  Q
    ||||||| ||||||||||||| ||| ||||    
T  928182 tgtttacaaatgtttcccaacccaagagaa 928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 44650278 - 44650399
Alignment:
Q  199 aacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggtgtttacta 297  Q
    ||||| ||||| ||||||||||| |||||| |||||||||||||||||| ||| | |||||||| ||||||| |  ||||| ||||||| |||||||| |    
T  44650278 aacaaactcacaaagaacaaaccataatttttacatttttctcaatctc-tccaatgaacaagacactcaataattttcactcacccaaagtgtttacaa 44650376  T
Q  298 atgtttcccaactcaacagaacc 320  Q
    |||||| |||||| || ||||||    
T  44650377 atgttttccaacttaagagaacc 44650399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 22079421 - 22079307
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatc 245  Q
    |||||| |||||||||||||||||||||||||||||        ||||||| ||||||||||| ||||||||| | ||||||||| |||||||| |||||    
T  22079421 atcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaa-cataatttctaccatttttc-caatc 22079324  T
Q  246 tcttcctaagaacaaga 262  Q
    |||||| | ||||||||    
T  22079323 tcttcccatgaacaaga 22079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 320
Target Start/End: Original strand, 2263038 - 2263214
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaac---cctaatttctacatttttctcaa 243  Q
    |||||||||||||||||||| ||||| |||| ||||        ||| ||||||||||||||| ||||| |||    | || ||||||| |||||| |||    
T  2263038 atcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaagctcaccaagaaaaaaaaaacttactttctacctttttcccaa 2263137  T
Q  244 tctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacc 320  Q
    |||||| | |||| ||| ||||||||||| ||||| |  ||||| ||||||| ||| ||||| ||||||| ||||||    
T  2263138 tctctttcaaagagcaaaagactcaatgatttcactcgaccaagatgtttacaaatatttcctaactcaagagaacc 2263214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 3460801 - 3460716
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||| |||||||||||||| |||||||| ||||        ||||||||||||||||||| |||||||||| |||||||||||    
T  3460801 atcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctac 3460716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 10925284 - 10925157
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    ||||||||||||||||||| |||||| |||| |||||||||  ||||||| ||||||||  || | |||||||| |||||||||  ||||| ||||||||    
T  10925284 ttagcttcaacaagctcacaaagaac-aaccataatttctatccattttt-tcaatctc-accaatgaacaagacactcaatgattttcactcacccaag 10925188  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  10925187 gtgtttac-aatgtttcccaacccaagagaac 10925157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 15820368 - 15820241
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||||| ||||||||||| |||||| |||  || |||| |||| ||  || |||||||||| ||||||||| || ||| ||||||||    
T  15820368 ttagcttcaacaagctcacaaagaacaaacc-taatttttacccatctttc-caatatca-ccaaagaacaagacactcaatgattttcactcacccaag 15820272  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||||||| |||||    
T  15820271 gtgtttac-aatgtttcccaactcaagagaac 15820241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 19754556 - 19754436
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||  || | |||||||| |||| ||||  ||||| | | ||||    
T  19754556 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttctcaatctc-accaatgaacaagacactc-atgattttcactctctcaag 19754460  T
Q  288 gtgtttactaatgtttcccaactc 311  Q
    |||||||| |||||||||||||||    
T  19754459 gtgtttacgaatgtttcccaactc 19754436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 28265661 - 28265778
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| | |||| ||||||||||||||| | ||||| |||||||  || | |||||||| |||||||||  ||||| |||||||||    
T  28265661 ttagcttcaacaagctcacaatgaac-aaccctaatttctacctattttcccaatctc-gccaatgaacaagacactcaatgattttcactcacccaagg 28265758  T
Q  289 tgtttactaatgtttcccaac 309  Q
    ||||||| |||||||||||||    
T  28265759 tgtttac-aatgtttcccaac 28265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 319
Target Start/End: Complemental strand, 31659342 - 31659172
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaat 244  Q
    |||||||||||||| |||||||||||||||  ||||        ||||||||||||||||||| |||||| | ||||||||||||  |||||||| ||||    
T  31659342 atcaataagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-agccctaatttctacccatttttc-caat 31659246  T
Q  245 ctcttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |||  || | |||||||| |||||||||  ||||| |||||||||||||||| ||||||||| ||| ||| |||||    
T  31659245 ctc-accaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccgaacccaagagaac 31659172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 49918411 - 49918294
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||||||||| |||| |||||||| |||||||||||||   |||||||||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  49918411 ttagcttcaacaagttcacaaagaacaa-ccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 49918314  T
Q  289 tgtttactaatgtttcccaa 308  Q
    |||||  |||||||||||||    
T  49918313 tgttttataatgtttcccaa 49918294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 197023 - 197142
Alignment:
Q  199 aacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtttact 296  Q
    ||||||||||| |||||||| ||||||||||||| | |||||||||||||  |  | |||||||| ||||||||| || ||| ||||||||||||||||     
T  197023 aacaagctcacaaagaacaa-ccctaatttctaccaattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgtttac- 197119  T
Q  297 aatgtttcccaactcaacagaac 319  Q
    ||||||||||||| ||| |||||    
T  197120 aatgtttcccaacccaagagaac 197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 322
Target Start/End: Original strand, 4552744 - 4552874
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| ||| ||||| ||||||||||| |  |||||||||||||  || | |||||||| |||||||||  ||| | |||||||||    
T  4552744 ttagcttcaacaagctcacaaaggacaaa-cctaatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttccctcacccaagg 4552841  T
Q  289 tgtttactaatgtttcccaactcaacagaacctc 322  Q
    ||||||| |||||||| |||| ||| ||||||||    
T  4552842 tgtttac-aatgtttctcaacccaagagaacctc 4552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 37282762 - 37282877
Alignment:
Q  154 agttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttccta 253  Q
    |||||||||||||||||| ||||| ||||        ||||||||||||||||||| | |||||||||||||||| |||  |||| |||||||| ||| |    
T  37282762 agttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaaccctaatttataccatttt-tcaatctc-tccaa 37282859  T
Q  254 agaacaagagactcaatg 271  Q
     |||||||| ||||||||    
T  37282860 tgaacaagacactcaatg 37282877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 44646899 - 44646969
Alignment:
Q  199 aacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaat 270  Q
    ||||| ||||| ||||||||||| |||||| |||||||||||||||||| ||| | |||||||| |||||||    
T  44646899 aacaaactcacaaagaacaaaccataatttttacatttttctcaatctc-tccaatgaacaagacactcaat 44646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 50167282 - 50167410
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac-atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  |||||||||| || ||||| ||||||||||||| | ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  50167282 ttagctttgacaagctcacaaataacaa-ccctaatttctactaattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 50167379  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  50167380 tgtttac-aatgtttcccaacccaagagaacc 50167410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 834274 - 834401
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||||||||| |||||||| |||||||||||| |  ||||| |||||||  |  | |||||||| ||||||||| || ||| |||||||||    
T  834274 ttagcttaaacaagctcacaaagaacaa-ccctaatttctatccattttcccaatctca-caaatgaacaagacactcaatgattttcacgcacccaagg 834371  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  834372 tgtttac-aatgtttcccaacccaagagaac 834401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 11348759 - 11348640
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| || ||||| |||||||  || | |||||||| |||| ||||  ||||| | |||||||    
T  11348759 ttagcttcaacaagctcacaaagaac-aaccctaatttctaccaattttcccaatctc-accaatgaacaagacactc-atgattttcactctcccaagg 11348663  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  11348662 tgtttacaattgtttcccaactc 11348640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 37879018 - 37879137
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| ||||||||||||||| | ||||| |||||||  || | |||||||| |||| ||||  ||||| | |||||||    
T  37879018 ttagcttcaacaagctcacaaagaac-aaccctaatttctacctattttcccaatctc-accaatgaacaagacactc-atgattttcactctcccaagg 37879114  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  37879115 tgtttacaattgtttcccaactc 37879137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 43342422 - 43342480
Alignment:
Q  251 ctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaac 309  Q
    |||||||||||||||| ||||| ||||||||||||| |||| ||  |||||||||||||    
T  43342422 ctaagaacaagagactaaatgatttcacccacccaaagtgtatagaaatgtttcccaac 43342480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Complemental strand, 193672 - 193553
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    |||||||||||||||| |  |||||| |||||||||||||| |  |||||||||||||  || | |||||||| |||| ||||  ||||||| |||||||    
T  193672 ttagcttcaacaagctaataaagaac-aaccctaatttctacccattttctcaatctc-accaatgaacaagacactc-atgattttcaccctcccaagg 193576  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  193575 tgtttacaattgtttcccaactc 193553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 1050551 - 1050668
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtg 290  Q
    |||||||||| |||||| ||||||||| ||| ||||||  ||   |||| ||||||||||  | |||||||||||||||| | ||||| ||  ||| |||    
T  1050551 ttagcttcaataagctctcgaagaacacacc-taattttcacccatttcccaatctcttcacatgaacaagagactcaataatttcactcattcaatgtg 1050649  T
Q  291 tttactaatgtttcccaac 309  Q
    | ||| |||||||||||||    
T  1050650 tgtacaaatgtttcccaac 1050668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 3847228 - 3847355
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||   ||||| |||||||  |  | |||||||| ||||||||| || ||| |||||||||    
T  3847228 ttagcttaaacaaactcacaaagaacaa-ccctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttcactcacccaagg 3847325  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  3847326 tgtttac-aatgtttcccaacccaagagaac 3847355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 37033180 - 37033299
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta-catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  ||||| |||||||  || | |||||||| |||| ||||  ||||| | |||||||    
T  37033180 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctc-accaatgaacaagacactc-atgattttcactctcccaagg 37033276  T
Q  289 tgtttactaatgtttcccaactc 311  Q
    ||||||| | |||||||||||||    
T  37033277 tgtttacaattgtttcccaactc 37033299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 8871155 - 8871196
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||| | ||||| ||||||||||||||||||||||    
T  8871155 ttagcttcaacgaactcacaaagaacaaaccctaatttctac 8871196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 12318630 - 12318722
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccaccc 284  Q
    ||||||||||||||||| | | ||||||||| ||||||||||   ||||  ||||||| || | |||||||| ||||||||| ||||| |||||    
T  12318630 ttagcttcaacaagctctccatgaacaaacc-taatttctacccatttccaaatctctacccatgaacaagaaactcaatgatttcactcaccc 12318722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 29136308 - 29136268
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  29136308 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 29136268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 30476638 - 30476682
Alignment:
Q  274 ttcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||    
T  30476638 ttcacccacccaaggtgtttac-aatgtttcccaacccaagagaac 30476682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 47255447 - 47255487
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  47255447 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 47255487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 13547197 - 13547236
Alignment:
Q  192 tagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  13547197 tagcttcaacaagctcacaaagaac-aaccctaatttctac 13547236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 324
Target Start/End: Original strand, 7815380 - 7815513
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggt 289  Q
    ||||||||||||||||    ||||||||||||||||||| || ||||||||||||||  || | |||||||| || |||||| || |||||||| |||||    
T  7815380 ttagcttcaacaagcttctaaagaacaaaccctaatttcaacctttttctcaatctca-ccaatgaacaagacacgcaatgattttcacccacctaaggt 7815478  T
Q  290 gtttactaatgtttcccaactcaacagaacctctc 324  Q
    |||||| |||||||| |||| ||| ||||||||||    
T  7815479 gtttacaaatgtttctcaacccaatagaacctctc 7815513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 13121826 - 13121697
Alignment:
Q  195 cttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaaggtgttt 293  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||| || ||||  || | |||||||| |||||||||  ||||| ||||||| ||||||    
T  13121826 cttcaacaagctcacaaagaacaaaccctaatttctaccattttcccagtctc-accaatgaacaagacactcaatgattttcactcacccaatgtgttt 13121728  T
Q  294 actaatgtttcccaactcaacagaacctctc 324  Q
    || ||||||||||||| ||| |||| |||||    
T  13121727 acaaatgtttcccaacccaagagaagctctc 13121697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 33648276 - 33648176
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||||||||||| |||||||| ||||        ||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||    
T  33648276 atcaatgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatct 33648177  T
Q  247 c 247  Q
    |    
T  33648176 c 33648176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 214 - 324
Target Start/End: Complemental strand, 28671968 - 28671858
Alignment:
Q  214 aacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaa 313  Q
    |||||| ||||||||||||| ||||  |||| |||||| |||||||||||||||||| | ||||| || |||| |  ||||| ||||||||||||| |||    
T  28671968 aacaaaacctaatttctacaatttttccaatatcttcccaagaacaagagactcaataatttcactcatccaatgcatttacaaatgtttcccaacccaa 28671869  T
Q  314 cagaacctctc 324  Q
     ||||||||||    
T  28671868 aagaacctctc 28671858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 332
Target Start/End: Complemental strand, 11049614 - 11049470
Alignment:
Q  191 ttagcttcaacaagctcacgaa---gaacaaaccctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaa 286  Q
    ||||||||||||||||||| ||   |||||||||||||||| |||  |||||  ||||||  || || ||||||| ||||||||| || |||  ||||||    
T  11049614 ttagcttcaacaagctcacaaattagaacaaaccctaatttataccattttcctaatctca-ccaaaaaacaagacactcaatgattttcacttacccaa 11049516  T
Q  287 ggtgtttactaatgtttcccaactcaacagaacctctccaaagaac 332  Q
    ||||||||| ||||||||||||| ||| |||| ||||| |||||||    
T  11049515 ggtgtttacaaatgtttcccaacacaagagaagctctcaaaagaac 11049470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 24398162 - 24398077
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    |||||| |||||||||||||||||||||||| ||||        ||||||||||||||||||| ||||||||||| ||| ||||||    
T  24398162 atcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccttaacttctac 24398077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 34139878 - 34140005
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||||||||| |||||||| |||||||||||||   |||||||||||||  |  | |||||||| ||||||||| || ||| |||||||||    
T  34139878 ttagcttaaacaagctcacaaagaacaa-ccctaatttctacccattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaagg 34139975  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  34139976 tgtttac-aatgtttcccaacccaagagaac 34140005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 26353245 - 26353189
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctc 247  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||| |||| ||||||||    
T  26353245 ttagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttcaatctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 42261593 - 42261682
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcct---aagaacaagagactcaatgaattcac 278  Q
    ||||||||||||||||| | ||||||||| | ||||||||||  ||||||||||||| ||||   | |||||||||||||||||| |||||    
T  42261593 ttagcttcaacaagctctccaagaacaaa-cttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcac 42261682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 320
Target Start/End: Complemental strand, 36773623 - 36773495
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||||||||||||||| |||||||| ||||||||| | |   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  36773623 ttagcttcaacaagctcacaaagaacaa-ccctaatttattcccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 36773526  T
Q  289 tgtttactaatgtttcccaactcaacagaacc 320  Q
    ||||||| ||||||||||||| ||| ||||||    
T  36773525 tgtttac-aatgtttcccaacccaagagaacc 36773495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 11151698 - 11151825
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaagg 288  Q
    ||||||| ||||||||||| ||||||||| | ||||||||||   ||||| |||| ||  || | ||||||||||||||||||  ||||| |||||||||    
T  11151698 ttagcttaaacaagctcacaaagaacaaatc-taatttctacccattttcccaatttca-ccaatgaacaagagactcaatgattttcactcacccaagg 11151795  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  11151796 tgtttac-aatgtttcccaacccaagagaac 11151825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 11690562 - 11690435
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||   ||||| |||||||  |  | |||||||| ||||||||| || ||| |||||||||    
T  11690562 ttagcttaaacaagctcacaaagaacaaacc-taatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttcactcacccaagg 11690465  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  11690464 tgtttac-aatgtttcccaacccaagagaac 11690435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 309
Target Start/End: Original strand, 36318116 - 36318233
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    |||| |||||||||||||| |||||| ||||||||||||||  |||||||| |||||||  || | |||||||| |||||||||  ||||| ||||||||    
T  36318116 ttagtttcaacaagctcacaaagaac-aaccctaatttctacccatttttc-caatctc-accaatgaacaagacactcaatgattttcactcacccaag 36318212  T
Q  288 gtgtttactaatgtttcccaac 309  Q
    |||||||| ||| |||||||||    
T  36318213 gtgtttac-aatatttcccaac 36318233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 42362413 - 42362286
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||   ||||| |||||||  |  | |||||||| ||||||||| || ||| |||||||||    
T  42362413 ttagcttaaacaagctcacaaagaacaaacc-taatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttcactcacccaagg 42362316  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  42362315 tgtttac-aatgtttcccaacccaagagaac 42362286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 5723320 - 5723488
Alignment:
Q  147 atcaataagttctttacaaagagatacaaaatggttnnnnnnnnttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatct 246  Q
    |||||| ||||||| |||||||||||||||| ||||        |||||||  ||||| |||| |||||||| || ||||||||||  ||||||||||||    
T  5723320 atcaatgagttctt-acaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcc-taatttctacccttttctcaatct 5723417  T
Q  247 cttcctaagaacaagagactcaatga-attcacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |  || | |||||||| |||||||||  ||||| || ||||||||||||| ||||||||||||| ||| |||||    
T  5723418 c-accaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaagagaac 5723488  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 320
Target Start/End: Original strand, 33162557 - 33162685
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttcta--catttttctcaatctcttcctaagaacaagagactcaatga-attcacccacccaag 287  Q
    ||||||||||||||||||| |||||| ||||||||||||||  |||||| || ||| ||  || | |||||||| |||| ||||  ||||  ||||||||    
T  33162557 ttagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcct-aatttc-accaatgaacaagacactcgatgattttcaatcacccaag 33162653  T
Q  288 gtgtttactaatgtttcccaactcaacagaacc 320  Q
    |||||||| ||||||||||||||||| ||||||    
T  33162654 gtgtttac-aatgtttcccaactcaagagaacc 33162685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 723851 - 723978
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||  | ||||| |||||||  |  | |||||||| ||||||||| || ||| ||||||||    
T  723851 ttagcttaaacaagctcacaaagaacaaacc-taatttctacccagttttc-caatctca-caaatgaacaagacactcaatgattttcactcacccaag 723947  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||||||| ||| |||||    
T  723948 gtgtttac-aatgtttcccaacccaaaagaac 723978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 17057476 - 17057603
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||  | |||||||| |||||||||||||  ||||||| |||||||  || | |||||||| ||||||||| || ||| ||||||||    
T  17057476 ttagcttcaacaagcttgcaaagaacaa-ccctaatttctacccatttttc-caatctca-ccaatgaacaagacactcaatgattttcactcacccaag 17057572  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||| ||||||||| ||| |||||    
T  17057573 gtgtttac-aatatttcccaacccaagagaac 17057603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 17085459 - 17085586
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac--atttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaag 287  Q
    ||||||||||||||||  | |||||||| |||||||||||||  ||||||| |||||||  || | |||||||| ||||||||| || ||| ||||||||    
T  17085459 ttagcttcaacaagcttgcaaagaacaa-ccctaatttctacccatttttc-caatctca-ccaatgaacaagacactcaatgattttcactcacccaag 17085555  T
Q  288 gtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||| ||||||||| ||| |||||    
T  17085556 gtgtttac-aatatttcccaacccaagagaac 17085586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 42020030 - 42020109
Alignment:
Q  242 aatctcttcctaagaacaagagactcaatgaattcacccacccaaggtgtttactaatgtttcccaactcaacagaacct 321  Q
    |||||||||| ||||| || ||||||||||| ||||| |||||| | ||||||| ||| |||  |||||||| |||||||    
T  42020030 aatctcttcccaagaaaaatagactcaatgatttcactcacccacgatgtttacaaatatttatcaactcaagagaacct 42020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 29867930 - 29867803
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacat-ttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaagg 288  Q
    |||||||  ||||| |||| |||||||| |||||||||||||   ||||| |||||||  || | |||||||| ||||||||| || ||| |||||||||    
T  29867930 ttagctttgacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcactcacccaagg 29867833  T
Q  289 tgtttactaatgtttcccaactcaacagaac 319  Q
    ||||||| ||||||||||||| ||| |||||    
T  29867832 tgtttac-aatgtttcccaacccaagagaac 29867803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 12123462 - 12123526
Alignment:
Q  4 aatatcaaagtaacctcaaacaaaccaacaacaacaataacaaatctagatataatcttggaatcaagtg 73  Q
    |||||||||||||||||||||||     |||||||||||||||| ||| || |||||| | |||||||||    
T  12123462 aatatcaaagtaacctcaaacaa-----caacaacaataacaaacctatatctaatctagaaatcaagtg 12123526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 14633996 - 14634060
Alignment:
Q  255 gaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||    
T  14633996 gaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaaagaac 14634060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 39284883 - 39284819
Alignment:
Q  255 gaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaacagaac 319  Q
    |||||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||| |||||    
T  39284883 gaacaagatactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 39284819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 7815174 - 7815214
Alignment:
Q  33 aacaacaataacaaatctagatataatcttggaatcaagtg 73  Q
    |||||||||||||| ||||||| |||||| |||||||||||    
T  7815174 aacaacaataacaagtctagatctaatctaggaatcaagtg 7815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 490428 - 490517
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctacatttttctcaatctcttcct---aagaacaagagactcaatgaattcac 278  Q
    ||||||||||||||||| | ||||||||| | ||||||||||  ||||||||||||| ||||   | |||||||||||||||||| |||||    
T  490428 ttagcttcaacaagctctccaagaacaaa-cttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcac 490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 80390 - 80430
Alignment:
Q  191 ttagcttcaacaagctcacgaagaacaaaccctaatttctac 232  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  80390 ttagcttcaacaagctcacaaagaac-aaccctaatttctac 80430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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