View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16978_high_8 (Length: 413)

Name: NF16978_high_8
Description: NF16978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16978_high_8
NF16978_high_8
[»] chr6 (18 HSPs)
chr6 (19-349)||(14623036-14623365)
chr6 (19-347)||(14589378-14589705)
chr6 (191-317)||(33123017-33123143)
chr6 (195-318)||(26388201-26388324)
chr6 (214-318)||(29938623-29938726)
chr6 (196-314)||(7632781-7632899)
chr6 (199-317)||(3989524-3989642)
chr6 (25-167)||(12846939-12847080)
chr6 (196-311)||(3989524-3989639)
chr6 (191-319)||(7632776-7632904)
chr6 (196-314)||(14623212-14623330)
chr6 (196-314)||(33123022-33123140)
chr6 (196-305)||(29938627-29938735)
chr6 (270-330)||(10405046-10405106)
chr6 (191-314)||(26388202-26388325)
chr6 (196-314)||(14589554-14589672)
chr6 (270-319)||(23767941-23767990)
chr6 (274-318)||(30629598-30629642)
[»] chr4 (37 HSPs)
chr4 (19-176)||(29954955-29955111)
chr4 (191-318)||(22720512-22720639)
chr4 (19-178)||(51369340-51369498)
chr4 (191-318)||(52673604-52673731)
chr4 (191-318)||(22720513-22720640)
chr4 (191-318)||(22768150-22768277)
chr4 (191-331)||(52673592-52673732)
chr4 (206-316)||(41622106-41622216)
chr4 (199-318)||(22768151-22768270)
chr4 (191-318)||(49083049-49083171)
chr4 (191-248)||(2198054-2198111)
chr4 (270-318)||(2198055-2198103)
chr4 (191-318)||(44626168-44626293)
chr4 (191-318)||(49083048-49083170)
chr4 (206-319)||(6464885-6464998)
chr4 (270-318)||(22923666-22923714)
chr4 (270-318)||(22928319-22928367)
chr4 (270-318)||(22984598-22984646)
chr4 (270-318)||(22998186-22998234)
chr4 (216-312)||(41622128-41622224)
chr4 (270-319)||(15794769-15794819)
chr4 (270-319)||(2198121-2198169)
chr4 (191-244)||(22923665-22923718)
chr4 (191-244)||(22928318-22928371)
chr4 (191-244)||(22984597-22984650)
chr4 (191-244)||(22998185-22998238)
chr4 (202-243)||(2198118-2198159)
chr4 (281-318)||(5281231-5281268)
chr4 (192-245)||(6464886-6464939)
chr4 (270-319)||(39396827-39396876)
chr4 (275-324)||(39897110-39897159)
chr4 (277-318)||(44156092-44156133)
chr4 (281-330)||(50485791-50485840)
chr4 (191-244)||(52299084-52299136)
chr4 (271-319)||(6131436-6131484)
chr4 (196-263)||(15794774-15794842)
chr4 (275-331)||(22020110-22020166)
[»] chr2 (15 HSPs)
chr2 (19-175)||(20493090-20493245)
chr2 (191-286)||(8996792-8996887)
chr2 (216-319)||(8717540-8717643)
chr2 (189-318)||(20218550-20218679)
chr2 (270-318)||(10495729-10495777)
chr2 (270-318)||(43100756-43100804)
chr2 (177-244)||(10495725-10495792)
chr2 (257-319)||(8996729-8996791)
chr2 (224-318)||(8996792-8996886)
chr2 (19-112)||(1355419-1355511)
chr2 (194-318)||(13953774-13953899)
chr2 (194-318)||(14094981-14095106)
chr2 (226-301)||(39792136-39792211)
chr2 (191-237)||(43100755-43100801)
chr2 (196-244)||(8996734-8996782)
[»] chr3 (13 HSPs)
chr3 (19-158)||(11532268-11532406)
chr3 (196-318)||(50334932-50335053)
chr3 (191-296)||(35239682-35239787)
chr3 (214-316)||(29497369-29497471)
chr3 (191-314)||(50334932-50335054)
chr3 (200-298)||(32711221-32711319)
chr3 (196-296)||(29497371-29497471)
chr3 (214-318)||(35239682-35239786)
chr3 (192-323)||(53711868-53711998)
chr3 (281-315)||(42912351-42912385)
chr3 (196-229)||(42912352-42912385)
chr3 (270-319)||(53711867-53711916)
chr3 (216-296)||(48593175-48593255)
[»] chr5 (18 HSPs)
chr5 (191-317)||(26221030-26221156)
chr5 (195-318)||(21032539-21032662)
chr5 (198-318)||(42364233-42364353)
chr5 (196-319)||(29486504-29486627)
chr5 (216-318)||(5240233-5240335)
chr5 (189-296)||(21032536-21032643)
chr5 (196-319)||(29486509-29486632)
chr5 (191-319)||(7604194-7604323)
chr5 (191-318)||(42364227-42364354)
chr5 (199-314)||(26221035-26221150)
chr5 (191-294)||(5240232-5240335)
chr5 (270-316)||(892560-892606)
chr5 (196-244)||(892562-892610)
chr5 (270-314)||(6834041-6834085)
chr5 (190-244)||(6834035-6834089)
chr5 (281-319)||(35969225-35969263)
chr5 (275-319)||(1098634-1098678)
chr5 (275-319)||(36864512-36864556)
[»] chr8 (13 HSPs)
chr8 (191-318)||(6197832-6197959)
chr8 (191-304)||(13325116-13325225)
chr8 (191-314)||(6197837-6197960)
chr8 (192-318)||(27938998-27939124)
chr8 (196-319)||(11322569-11322690)
chr8 (206-314)||(13325116-13325220)
chr8 (212-319)||(11322589-11322695)
chr8 (202-244)||(158444-158486)
chr8 (270-304)||(158448-158482)
chr8 (270-316)||(1214021-1214067)
chr8 (191-244)||(43140629-43140681)
chr8 (196-244)||(28205809-28205857)
chr8 (270-318)||(43140553-43140601)
[»] chr7 (25 HSPs)
chr7 (191-314)||(4132392-4132516)
chr7 (191-314)||(4132397-4132521)
chr7 (196-333)||(38646177-38646315)
chr7 (191-333)||(41115556-41115698)
chr7 (270-318)||(26982771-26982819)
chr7 (191-244)||(26982770-26982823)
chr7 (190-247)||(43250417-43250474)
chr7 (270-331)||(45578005-45578066)
chr7 (270-318)||(43250424-43250472)
chr7 (270-316)||(38646175-38646221)
chr7 (276-318)||(43250376-43250418)
chr7 (270-318)||(21857076-21857124)
chr7 (190-246)||(45578016-45578072)
chr7 (191-234)||(43250375-43250418)
chr7 (191-237)||(38646255-38646301)
chr7 (191-244)||(21587841-21587894)
chr7 (191-244)||(21857075-21857128)
chr7 (270-319)||(24155642-24155691)
chr7 (191-244)||(34840620-34840673)
chr7 (196-313)||(41115562-41115679)
chr7 (270-318)||(21587842-21587890)
chr7 (270-318)||(21857171-21857219)
chr7 (275-319)||(30457820-30457864)
chr7 (199-259)||(34703509-34703569)
chr7 (199-259)||(40416972-40417032)
[»] chr1 (13 HSPs)
chr1 (191-331)||(8352129-8352269)
chr1 (191-314)||(8352141-8352264)
chr1 (180-310)||(26468289-26468419)
chr1 (197-311)||(31635757-31635871)
chr1 (196-283)||(14773765-14773852)
chr1 (199-318)||(31635752-31635871)
chr1 (196-314)||(43731130-43731248)
chr1 (200-318)||(26468301-26468419)
chr1 (194-316)||(43731128-43731250)
chr1 (250-318)||(30800186-30800254)
chr1 (216-294)||(897042-897120)
chr1 (270-319)||(39940571-39940620)
chr1 (275-319)||(10256787-10256831)
[»] scaffold0155 (1 HSPs)
scaffold0155 (191-229)||(33971-34009)


Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 19 - 349
Target Start/End: Original strand, 14623036 - 14623365
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14623036 gttggtaatagtggatgaggaaggaagtatttacagg-aacaatgccaaagacatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 14623134  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactacattcagtcattattataagcaaaacttcacttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14623135 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaaacatatttcatatacttcattcggtcattattataagcaaaacttcacttt 14623234  T
Q  219 tcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14623235 tcagatacattgaataattcatgtatctaatctttattatagactgaacagattaatttttcaatgtatctaaaaagtgaagttttatttataatagtga 14623334  T
Q  319 tgagagtgagtatatgtttccctttcaacag 349  Q
    |||||| ||||||||||||||||||||||||    
T  14623335 tgagagggagtatatgtttccctttcaacag 14623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 14589378 - 14589705
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14589378 gttggtaatagtggatgaggaaggaagtatttacagg-aacaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 14589476  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactacattcagtcattattataagcaaaacttcacttt 218  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||    
T  14589477 aaacttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactcccttcggtcattattataaacaaaacttcacttt 14589576  T
Q  219 tcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  14589577 tcagatacattgaataattcatgtatctagtctttattatagaccggacagattgattattcaatgtatctaaaaagtaaagttttatttataatagtga 14589676  T
Q  319 tgagagtgagtatatgtttccctttcaac 347  Q
    |||||| ||||||| ||||||||||||||    
T  14589677 tgagagggagtataggtttccctttcaac 14589705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 317
Target Start/End: Original strand, 33123017 - 33123143
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||| |||||| ||| |||| ||||||||| || |  ||||||||| | ||||||||    
T  33123017 gtcattattataaacaaaacttcactttttaaatacattgaataattaatgtatctagtcttttttatagacttgatacgttaattattaagtgtatcta 33123116  T
Q  291 aaaagtgaagttttacttataatagtg 317  Q
    |||||| || |||| ||||||||||||    
T  33123117 aaaagtaaacttttgcttataatagtg 33123143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 26388201 - 26388324
Alignment:
Q  195 ttattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 294  Q
    ||||||||| |||||||  |||||| ||||| ||||||||||| |||||| ||  ||||||||||||||| | | |||||||||||||| ||| ||||||    
T  26388201 ttattataaacaaaactctactttttagatatattgaataattaatgtatctaatctttattatagactgaatacattaattattcaatatatataaaaa 26388300  T
Q  295 gtgaagttttacttataatagtga 318  Q
    ||| |||||| |||||||||||||    
T  26388301 gtggagtttttcttataatagtga 26388324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 29938726 - 29938623
Alignment:
Q  214 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 313  Q
    |||||| ||||||||||||||||| |||||| ||| ||||||| || ||| || | |||||||||| ||||||||||||||||||| |||||||||||||    
T  29938726 actttttagatacattgaataattaatgtatctagtctttattgtatactagatacattaattatt-aatgtatctaaaaagtgaaattttacttataat 29938628  T
Q  314 agtga 318  Q
    |||||    
T  29938627 agtga 29938623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 7632781 - 7632899
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||| ||||||||||||||  |  |||||| ||||||  |||||| ||| ||||||||||||| ||| | |||||||||||| |||||||||||||    
T  7632781 tattataaacaaaacttcactttctaactacattcaataatcaatgtatctagtctttattatagaccggatacattaattattcagtgtatctaaaaag 7632880  T
Q  296 tgaagttttacttataata 314  Q
    | |||||||  ||||||||    
T  7632881 ttaagttttgtttataata 7632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 3989524 - 3989642
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 298  Q
    ||||||||||||||||||||| | ||||||  ||||||  |||| | ||| |||||||||||||| || | || ||||||||||||||||| || ||| |    
T  3989524 tataagcaaaacttcactttttaaatacataaaataatcaatgtttctagtctttattatagactagatacatcaattattcaatgtatcttaatagtta 3989623  T
Q  299 agttttacttataatagtg 317  Q
    ||||||  |||||||||||    
T  3989624 agttttgattataatagtg 3989642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 12846939 - 12847080
Alignment:
Q  25 aatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaaaaattt 124  Q
    |||| ||||||  ||||||| |||||||||| || ||||| ||||| ||||| ||| || | ||||||||||| ||||||||  |||||||| || ||||    
T  12846939 aataatggatgccgaaggaattatttacagg-aacaatgcaaaagagatgggcaagattttcagttcaaaagaacttcacaaaaaatacattgaagattt 12847037  T
Q  125 cattgccactcttcaaaagtttagagttcattccgacaattaa 167  Q
    ||||||  |||||||||||| ||| |||||||| || ||||||    
T  12847038 cattgctgctcttcaaaagtatagggttcattctgagaattaa 12847080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 3989639 - 3989524
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||| |||||||| ||| || ||||||||||||||||| |||||| ||| || || || ||||| || | ||| ||||||  |||||| |||||||    
T  3989639 tattataatcaaaacttaactattaagatacattgaataattgatgtatctagtctataataaagactagaaacattgattattttatgtatttaaaaag 3989540  T
Q  296 tgaagttttacttata 311  Q
    ||||||||| ||||||    
T  3989539 tgaagttttgcttata 3989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 7632904 - 7632776
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||||||| ||||||   | || || || ||||| || | ||| |||||| ||||||  ||    
T  7632904 gtcattattataaacaaaacttaactttttagatacactgaataattaatgtatccggtctataataaagactagatacattgattattgaatgtagtta 7632805  T
Q  291 aaaagtgaagttttacttataatagtgat 319  Q
     |||||||||||||  |||||||||||||    
T  7632804 gaaagtgaagttttgtttataatagtgat 7632776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 14623330 - 14623212
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    ||||||||  |||||||||||||| |||||||||||| |||| || | |  || || || || ||| | || | || ||||||||||||||||| |||||    
T  14623330 tattataaataaaacttcactttttagatacattgaaaaattaatctgttcagtctataataaagattagatacatgaattattcaatgtatctgaaaag 14623231  T
Q  296 tgaagttttacttataata 314  Q
    ||||||||| |||||||||    
T  14623230 tgaagttttgcttataata 14623212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 33123140 - 33123022
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||||||||| || |||||| ||||||| | ||||||| | ||||  || || ||  | ||||| || | |||||||||||||||||| |||||||    
T  33123140 tattataagcaaaagtttactttttagatacacttaataattaacgtatcaagtctataaaaaagactagatacattaattattcaatgtatttaaaaag 33123041  T
Q  296 tgaagttttacttataata 314  Q
    |||||||||  ||||||||    
T  33123040 tgaagttttgtttataata 33123022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 305
Target Start/End: Original strand, 29938627 - 29938735
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    ||||||||| |||| ||||||||| ||||||||| ||||||| |||||| |||  |  | || ||||| || | ||||||||||||||||||||||||||    
T  29938627 tattataagtaaaatttcactttttagatacatt-aataattaatgtatctagtatacaataaagactagatacattaattattcaatgtatctaaaaag 29938725  T
Q  296 tgaagtttta 305  Q
    |  |||||||    
T  29938726 tagagtttta 29938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 10405106 - 10405046
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagta 330  Q
    |||||||||| ||||||| |||||| |||||||||| ||||||||||||| |||| |||||    
T  10405106 attaattatttaatgtatttaaaaaatgaagttttatttataatagtgatcagagagagta 10405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 26388325 - 26388202
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| ||||||||| |||||| ||||||| | ||| ||||||||||| ||||||  || || || || ||| | || | |||||||||||||| ||||||    
T  26388325 gtcactattataagaaaaactccactttttatatatattgaataattaatgtattcagtctataataaagattagatacattaattattcaatatatcta 26388226  T
Q  291 aaaagtgaagttttacttataata 314  Q
    ||||||  ||||||  ||||||||    
T  26388225 aaaagtagagttttgtttataata 26388202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 14589672 - 14589554
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    ||||||||  ||||||| |||||| ||||||||||||||||  || | |   | || || || ||||| || | || ||||||||||||||||| |||||    
T  14589672 tattataaataaaactttactttttagatacattgaataatcaatctgtccggtctataataaagactagatacatgaattattcaatgtatctgaaaag 14589573  T
Q  296 tgaagttttacttataata 314  Q
    |||||||||  ||||||||    
T  14589572 tgaagttttgtttataata 14589554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 23767990 - 23767941
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    |||||||||| |||||||| ||||| |||| |||||||||||||| ||||    
T  23767990 attaattatttaatgtatcgaaaaactgaaattttacttataatattgat 23767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 30629642 - 30629598
Alignment:
Q  274 attattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||| ||||||||||||||| ||||  ||||||||||||    
T  30629642 attattcaatctatctaaaaagtgaaattttgtttataatagtga 30629598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 29954955 - 29955111
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    ||||| |||||||||||||||||||||||| ||  || || ||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||    
T  29954955 gttggcaatagtggatgaggaaggaagtatgtatcgg-aataatgccaaagatatggaaaaggttttcagttcaaaagatcttcacaatgaatacattaa 29955053  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttc 176  Q
    | || |||||||  |||||||||||| |||||||| ||  | ||||||||||||||||    
T  29955054 agatgtcattgctgctcttcaaaagtatagagttcgttatgtcaattaagcatatttc 29955111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 22720512 - 22720639
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||| ||||| | ||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||||||||||||    
T  22720512 gtcactattataaacaaaattccactttttagatacattgaataattaatgtatctagtctttattatagactgcatacattaattattcaatgtatcta 22720611  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||||||| |||||| |||||||||||||    
T  22720612 aaaagtggagttttgcttataatagtga 22720639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 51369498 - 51369340
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    |||||||||||||||||||||||| || |  | || |||||||||| ||||| ||||||||  || | ||||||||||||||||||||| ||||||||||    
T  51369498 gttggtaatagtggatgaggaaggtagcacgtgca-ggaaaaatgctaaagatatgggaaaaattttcagttcaaaagatcttcacaatcaatacattaa 51369400  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcat 178  Q
    | |||| || ||  |||||||||||  ||||||||||||||||| |||||||||||||||    
T  51369399 agatttaatcgctgctcttcaaaagcatagagttcattccgacagttaagcatatttcat 51369340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 52673604 - 52673731
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| ||||||||||||||||| |||||| ||||| ||||||||||| |||||| |||  ||||||||||  |||| | |||||||||||||||||||||    
T  52673604 gtcactattataagcaaaactttactttttagatatattgaataattaatgtatctagtttttattatagtatggatacattaattattcaatgtatcta 52673703  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||||||||| |||| |||||||||||||    
T  52673704 aaaagtgaaattttgcttataatagtga 52673731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 22720640 - 22720513
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||  || || || || ||||| || | |||||||||||||||||||||    
T  22720640 gtcactattataagcaaaactccactttttagatacattgaataattaatgtatgcagtctataataaagactagatacattaattattcaatgtatcta 22720541  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||||||| | ||||  ||||||||||||    
T  22720540 aaaagtggaattttgtttataatagtga 22720513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 22768150 - 22768277
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||||| ||  ||| ||||||||||||||||| |||||| ||| ||||||||||||||| |   |||||||||||||||||||||    
T  22768150 gtcactattataagcaaaactccatattttagatacattgaataattaatgtatctagtctttattatagactgcattcattaattattcaatgtatcta 22768249  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||||||| ||| ||  ||||| ||||||    
T  22768250 aaaagtgtagtgttgtttatagtagtga 22768277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 52673732 - 52673592
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||  |  || || || | ||| || | |||||||||||||| ||||||    
T  52673732 gtcactattataagcaaaatttcactttttagatacattgaataattaatgtatccatactataataaaaactagatacattaattattcaatatatcta 52673633  T
Q  291 aaaagtgaagttttacttataatagtgatgagagtgagtat 331  Q
    |||||| ||||||| ||||||||||||| | ||| ||||||    
T  52673632 aaaagtaaagttttgcttataatagtgacgggagggagtat 52673592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 41622216 - 41622106
Alignment:
Q  206 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 305  Q
    |||| ||||||||| ||||||||||||| ||| |||||| ||| ||||||||||||||    | | ||||||||||||||||||||||| |  | |||||    
T  41622216 aaaagttcactttttagatacattgaatgattaatgtatctagtctttattatagactacgtacactaattattcaatgtatctaaaaaatagattttta 41622117  T
Q  306 cttataatagt 316  Q
    |||||||||||    
T  41622116 cttataatagt 41622106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 22768270 - 22768151
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 298  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||| ||  || || || || ||||| || | ||||||||||||||||||||||||  ||     
T  22768270 tataaacaacactacactttttagatacattgaataattaatgaatgcagtctataataaagactagatacattaattattcaatgtatctaaaatatgg 22768171  T
Q  299 agttttacttataatagtga 318  Q
    |||||| |||||||||||||    
T  22768170 agttttgcttataatagtga 22768151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 49083171 - 49083049
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||| ||||| ||| ||||||||| ||||||| |||||  ||  ||||||||    || || | ||||||||||||||| |||||    
T  49083171 gtcactattataagcaaaatttcacattttagatacattaaataattaatgtaactaatctttatta----ctagatacattaattattcaatgcatcta 49083076  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    |||| ||||||||| |||||||||||||    
T  49083075 aaaa-tgaagttttgcttataatagtga 49083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 2198054 - 2198111
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatag 248  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  2198054 gtcactattataagcaaaactccactttttagatacattgaataattaatgtatatag 2198111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 2198103 - 2198055
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2198103 attaattattcaatgtatctaaaaagtggagttttgcttataatagtga 2198055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 44626168 - 44626293
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||| ||||| || | |||||||||||||||||||| | |||||| ||| || |||||||  |   | | |||||||||||| | ||| |     
T  44626168 gtcactattataatcaaaattttatttttcagatacattgaataactaatgtatctagtctatattataacca--aaaaattaattattcagtatatttg 44626265  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||||||    
T  44626266 aaaagtgaagttttacttataatagtga 44626293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 49083048 - 49083170
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| ||||||||||||||||||| |||| |||| |||||||||||| |||||| |||    || || ||| | |  | |||||||||| ||||||||||    
T  49083048 gtcactattataagcaaaacttcattttt-agatgcattgaataattaatgtatctag----taataaagattagttacattaattatttaatgtatcta 49083142  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    ||| ||||| |||| |||||||||||||    
T  49083143 aaatgtgaaattttgcttataatagtga 49083170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 6464998 - 6464885
Alignment:
Q  206 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 305  Q
    |||||||||||||| | |||| |||||||||| |||||| |||   ||||||||   || | | |||||||||||||||||| | |||||| ||||||||    
T  6464998 aaaacttcacttttaaaataccttgaataattaatgtatctagttattattataacatgtatacattaattattcaatgtattttaaaagtaaagtttta 6464899  T
Q  306 cttataatagtgat 319  Q
    ||||| ||| ||||    
T  6464898 cttatcataatgat 6464885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 22923714 - 22923666
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22923714 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22923666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 22928367 - 22928319
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22928367 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22928319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 22984646 - 22984598
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22984646 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22984598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 22998234 - 22998186
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22998234 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22998186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 312
Target Start/End: Original strand, 41622128 - 41622224
Alignment:
Q  216 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataa 312  Q
    |||| |||||||||||||||||  ||||  ||| || || || ||||| || | |||||| ||||||||||||||||||||||| ||||| ||||||    
T  41622128 tttttagatacattgaataattagtgtacgtagtctataataaagactagatacattaatcattcaatgtatctaaaaagtgaacttttatttataa 41622224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 15794819 - 15794769
Alignment:
Q  270 attaattattcaatgtatctaaaa-agtgaagttttacttataatagtgat 319  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  15794819 attaattattcaatgtatctaaaacaatgaaattttacttataatagtgat 15794769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 2198121 - 2198169
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  2198121 attaattattcaatgtatttaaaaagtgaagttttgctt-taatagtgat 2198169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22923665 - 22923718
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22923665 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22928318 - 22928371
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22928318 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22928371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22984597 - 22984650
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22984597 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22984650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22998185 - 22998238
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22998185 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22998238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 2198159 - 2198118
Alignment:
Q  202 aagcaaaacttcacttttcagatacattgaataattcatgta 243  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  2198159 aagcaaaacttcactttttaaatacattgaataattaatgta 2198118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 5281231 - 5281268
Alignment:
Q  281 aatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  5281231 aatgtatctaaaaagtgaatttttacttatattagtga 5281268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 6464886 - 6464939
Alignment:
Q  192 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtata 245  Q
    ||||||| ||||| ||||||| |||||| | ||||||||||||||| |||||||    
T  6464886 tcattatgataagtaaaactttacttttaaaatacattgaataattaatgtata 6464939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 39396876 - 39396827
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||||||| | |||||| ||||||||||||||||  |||||||||||||    
T  39396876 attaattatcccatgtatttaaaaagtgaagttttgtttataatagtgat 39396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 39897159 - 39897110
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgatgagag 324  Q
    |||||||||| |||||||||||||  |||||||| ||||||||| |||||    
T  39897159 ttattcaatgaatctaaaaagtgattttttacttctaatagtgacgagag 39897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 44156092 - 44156133
Alignment:
Q  277 attcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||| |||| |||||| ||||||    
T  44156092 attcaatgtatctaaaaagtgaatttttgcttatattagtga 44156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 50485791 - 50485840
Alignment:
Q  281 aatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagta 330  Q
    ||||||||||||||||||| |||   ||||||||||||||||| ||||||    
T  50485791 aatgtatctaaaaagtgaaatttagtttataatagtgatgagattgagta 50485840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 52299084 - 52299136
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||| ||||||    
T  52299084 gtcattattataagcaaaattttacttttta-atacattgaataattaatgtat 52299136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 6131484 - 6131436
Alignment:
Q  271 ttaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||||||| ||||||| |||||||| |||||||  |||||||||||||    
T  6131484 ttaattatttaatgtatttaaaaagtaaagttttgattataatagtgat 6131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 15794774 - 15794842
Alignment:
Q  196 tattataagcaaaacttcact-tttcagatacattgaataattcatgtatatagcctttattatagact 263  Q
    ||||||||| |||| |||| | ||| ||||||||||||||||| |||||| | | ||||||||||||||    
T  15794774 tattataagtaaaatttcattgttttagatacattgaataattaatgtatctggtctttattatagact 15794842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 22020166 - 22020110
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagtat 331  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||  |||| ||||||    
T  22020166 ttattgaatgaatctaaaaagtgaacttttgcttataatagtgaccagagggagtat 22020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 20493090 - 20493245
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    ||||| |||||||||||||||||||||||| || ||  |||||||||||||| ||||||||| || |  |||||||||||||||||||||||||||||||    
T  20493090 gttggcaatagtggatgaggaaggaagtatctataga-aaaaatgccaaagatatgggaaagattttcggttcaaaagatcttcacaatgaatacattaa 20493188  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatattt 175  Q
    |  ||||||||   |||| |||||   ||||||||||||| ||||||||||||||||    
T  20493189 aggtttcattgatgctctccaaaaacatagagttcattccaacaattaagcatattt 20493245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 8996887 - 8996792
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgta 286  Q
    |||| ||||||||||||||||  |||||  ||||||||||||||||  |||||||||| |||||||||||||| || | |||||||||||||||||    
T  8996887 gtcactattataagcaaaactctactttctagatacattgaataatcaatgtatatagtctttattatagactagatacattaattattcaatgta 8996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 8717540 - 8717643
Alignment:
Q  216 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatag 315  Q
    |||| ||||||||| ||||||| |||||| ||| |||||||||| ||| || | |||| ||||||||||||| |||||| | || ||| |||||||||||    
T  8717540 tttttagatacattaaataattaatgtatttagtctttattatatactagatacattatttattcaatgtatttaaaaaattaaatttaacttataatag 8717639  T
Q  316 tgat 319  Q
    ||||    
T  8717640 tgat 8717643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 20218550 - 20218679
Alignment:
Q  189 cagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatc 288  Q
    |||||| ||||||||||||||   ||||||| || | ||||||||||   ||||||  || |  |||||||||||||| | || |||||||||||| |||    
T  20218550 cagtcactattataagcaaaaaaacactttttagtttcattgaataaccgatgtatgcagtcagtattatagactggatacatcaattattcaatgaatc 20218649  T
Q  289 taaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||  | || |||||||||||||    
T  20218650 taaaaagtgatttcttgcttataatagtga 20218679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 10495729 - 10495777
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  10495729 attaaatattcaatgtatctaaaaagtgaaattttgcttataatagtga 10495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 43100804 - 43100756
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  43100804 attaattattcaatgtatctaaaaaatgaatttttgcttataatagtga 43100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 10495792 - 10495725
Alignment:
Q  177 atatactacattcagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    ||||||| ||| | |||| |||||||||||||| ||||||||| |||||||||||||| || ||||||    
T  10495792 atatacttcatccggtcactattataagcaaaatttcactttttagatacattgaatatttaatgtat 10495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 8996791 - 8996729
Alignment:
Q  257 atagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||||| || | |||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  8996791 atagactagatacattaattattcaatgtatctaaaaaccgaaattttgcttataatagtgat 8996729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 8996792 - 8996886
Alignment:
Q  224 tacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||| |||||| ||| || || || |||||  | | ||| ||||||||||||||||| |||||  |||||| |||||||||||||    
T  8996792 tacattgaataattaatgtatctagtctataataaagactatatacattgattattcaatgtatctagaaagtagagttttgcttataatagtga 8996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 1355419 - 1355511
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaata 112  Q
    ||||| ||| ||||||||||||||||||| || |||| || ||||| |||||  |||| |||||| | |||||||||||| |||||||| ||||    
T  1355419 gttggcaattgtggatgaggaaggaagtagtttcagg-aacaatgctaaagagttggggaaggttttcagttcaaaagatattcacaatcaata 1355511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 13953774 - 13953899
Alignment:
Q  194 attattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaa 292  Q
    |||||||||||||||| || | ||||  ||||| ||| |||||||  | ||||||| |||||||||| | | || | ||| |||||  ||||||||||||    
T  13953774 attattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaa 13953873  T
Q  293 aagtgaagttttacttataatagtga 318  Q
    | ||||||||||  ||||||||||||    
T  13953874 atgtgaagttttgtttataatagtga 13953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 14094981 - 14095106
Alignment:
Q  194 attattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaa 292  Q
    |||||||||||||||| || | ||||  ||||| ||| |||||||  | ||||||| |||||||||| | | || | ||| |||||  ||||||||||||    
T  14094981 attattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaa 14095080  T
Q  293 aagtgaagttttacttataatagtga 318  Q
    | ||||||||||  ||||||||||||    
T  14095081 atgtgaagttttgtttataatagtga 14095106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 39792136 - 39792211
Alignment:
Q  226 cattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagt 301  Q
    |||| ||||||| |||||| |||  ||||||||||| | || | |||||||||||| |||||||||||| ||||||    
T  39792136 cattaaataattaatgtatctagtttttattatagattagatacattaattattcattgtatctaaaaaatgaagt 39792211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 43100755 - 43100801
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataatt 237  Q
    |||| |||||||||||||| |||| |||| |||||||||||||||||    
T  43100755 gtcactattataagcaaaaattcattttttagatacattgaataatt 43100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 8996734 - 8996782
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||||||||||||| |||  |||| ||||||||||||||||| ||||||    
T  8996734 tattataagcaaaatttcggtttttagatacattgaataattaatgtat 8996782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 11532268 - 11532406
Alignment:
Q  19 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 118  Q
    |||||||||| ||||||||||||||||||  |||||  || ||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||| |    
T  11532268 gttggtaataatggatgaggaaggaagtacgtacaga-aacaatgccaaagatatgggaaaggttttcagttcaaaagatcttcacaatcaatacattga 11532366  T
Q  119 aaatttcattgccactcttcaaaagtttagagttcattcc 158  Q
    | |||| ||||   |||||||||||| |||||||||||||    
T  11532367 agattttattgttgctcttcaaaagtatagagttcattcc 11532406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 50334932 - 50335053
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||| ||||||||||| ||| ||||||||||||||||| |||||| ||  |||||||||||  || | | |||||||||||||| ||||||||||     
T  50334932 tattataaacaaaacttcacattttagatacattgaataattaatgtatctaatctttattataggttgtatacattaattattcaatatatctaaaaaa 50335031  T
Q  296 tgaagttttacttataatagtga 318  Q
    | || |||| |||||||||||||    
T  50335032 t-aaattttgcttataatagtga 50335053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 35239787 - 35239682
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||| ||||| || || ||| |||||||||||||| || |||||| ||| ||||||||||||||  | | |||||||||||||||||||||    
T  35239787 gtcactattataaccaaaatttgacattttagatacattgaatagttaatgtatctagtctttattatagacttaatacattaattattcaatgtatcta 35239688  T
Q  291 aaaagt 296  Q
    ||||||    
T  35239687 aaaagt 35239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 29497471 - 29497369
Alignment:
Q  214 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 313  Q
    |||||| |||||||||||| |||| || ||| ||| ||||||| ||||||| | | |||||||| |||||||||||||||||| || |||| ||||||||    
T  29497471 actttttagatacattgaacaattaatatatctagtctttattgtagactgaatacattaattagtcaatgtatctaaaaagtaaaattttgcttataat 29497372  T
Q  314 agt 316  Q
    |||    
T  29497371 agt 29497369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 50335054 - 50334932
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||| || | |||| ||||| ||||||||||| ||||||| | ||| || || ||| | || | |||||||||||||||||||||    
T  50335054 gtcactattataagcaaaattt-attttttagatatattgaataattaatgtatacaacctataataaagattagatacattaattattcaatgtatcta 50334956  T
Q  291 aaaagtgaagttttacttataata 314  Q
    ||| ||||||||||  ||||||||    
T  50334955 aaatgtgaagttttgtttataata 50334932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 32711221 - 32711319
Alignment:
Q  200 ataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 298  Q
    ||||||||||  |||||||| || | |||||||||||| |||||| | |||| ||||||||||  || | || |||||||||||| |||||||||||||    
T  32711221 ataagcaaaaagtcactttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagtga 32711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 29497371 - 29497471
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||||||||| || |||||| ||||||||||| ||||| ||||||  || ||  | || ||||| || | ||||||| ||||||||||||||||||    
T  29497371 tattataagcaaaattttactttttagatacattgactaattaatgtattcagtctacaataaagactagatatattaattgttcaatgtatctaaaaag 29497470  T
Q  296 t 296  Q
    |    
T  29497471 t 29497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 35239682 - 35239786
Alignment:
Q  214 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 313  Q
    |||||| ||||||||||||||||| ||||||  || || || || ||||| || | ||||| |||||||||||||||||| || || ||||  |||||||    
T  35239682 actttttagatacattgaataattaatgtattaagtctataataaagactagatacattaactattcaatgtatctaaaatgtcaaattttggttataat 35239781  T
Q  314 agtga 318  Q
    |||||    
T  35239782 agtga 35239786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 323
Target Start/End: Original strand, 53711868 - 53711998
Alignment:
Q  192 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaa 291  Q
    ||||||||||||| |||| ||||||||| | |||| || ||||||| |||||| |   ||||  |||||||| || |  ||||||||||||| ||| |||    
T  53711868 tcattattataagtaaaatttcactttttaaatactttaaataattaatgtatttgatctttcatatagactagatacgttaattattcaatatatataa 53711967  T
Q  292 aaagtgaagttttacttataatagtgatgaga 323  Q
    ||| | || |||||||||| ||||||| ||||    
T  53711968 aaa-ttaaattttacttatgatagtgacgaga 53711998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 42912385 - 42912351
Alignment:
Q  281 aatgtatctaaaaagtgaagttttacttataatag 315  Q
    |||||||||||||||||||||||| ||||||||||    
T  42912385 aatgtatctaaaaagtgaagttttgcttataatag 42912351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 42912352 - 42912385
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacatt 229  Q
    |||||||||||||||||||||||| |||||||||    
T  42912352 tattataagcaaaacttcactttttagatacatt 42912385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 53711916 - 53711867
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    |||||||||| || |||| ||||||||||| |||||||||||||| ||||    
T  53711916 attaattatttaaagtatttaaaaagtgaaattttacttataataatgat 53711867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 48593255 - 48593175
Alignment:
Q  216 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagt 296  Q
    |||| |||| |||||||||||| |||||| | | || |||| |||||  || | || ||||||||||||||||||||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagt 48593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 317
Target Start/End: Original strand, 26221030 - 26221156
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||| |||||||| |||||| ||||||||||||||||| |||||| |||  |||||||||||  | | | |||||||||||| ||||||||    
T  26221030 gtcaatattataaacaaaactttactttttagatacattgaataattaatgtatctagtttttattatagatggtatatattaattattcagtgtatcta 26221129  T
Q  291 aaaagtgaagttttacttataatagtg 317  Q
    ||||||||||||||||||||| |||||    
T  26221130 aaaagtgaagttttacttatattagtg 26221156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 21032662 - 21032539
Alignment:
Q  195 ttattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 294  Q
    ||||||||| ||||| |  |||||| ||||| ||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||||||||| ||||||    
T  21032662 ttattataaacaaaattctactttttagatatattgaataattaatgtatctagtctttattatagactgaatacattaattattcaatgtatataaaaa 21032563  T
Q  295 gtgaagttttacttataatagtga 318  Q
    ||| |||||| |||||||||||||    
T  21032562 gtggagttttgcttataatagtga 21032539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 198 - 318
Target Start/End: Original strand, 42364233 - 42364353
Alignment:
Q  198 ttataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtg 297  Q
    |||||| ||||| || |||||| | ||||||||||||||| |||||| ||| |||||||||| ||| || |   ||||||||||||||||||||||||||    
T  42364233 ttataaacaaaaatttactttttaaatacattgaataattaatgtatgtagtctttattataaactagataccctaattattcaatgtatctaaaaagtg 42364332  T
Q  298 aagttttacttataatagtga 318  Q
    ||||||| |||||||||||||    
T  42364333 aagttttgcttataatagtga 42364353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 29486627 - 29486504
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    ||||||||||||||  | |||||| ||||||||||||||||| || ||| ||| |||||| ||| ||| || | |||||||||||||||||||||||| |    
T  29486627 tattataagcaaaatctgactttttagatacattgaataattaatatatttagtctttatcataaactagatacattaattattcaatgtatctaaaatg 29486528  T
Q  296 tgaagttttacttataatagtgat 319  Q
    |||| |||| ||||||||||||||    
T  29486527 tgaaattttgcttataatagtgat 29486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 5240335 - 5240233
Alignment:
Q  216 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatag 315  Q
    |||| ||||||||||||||||| |||||| ||  |||||||||| ||| || | ||||||||||||||||||||||||| | || |||| ||||||||||    
T  5240335 tttttagatacattgaataattaatgtatctaaactttattatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatag 5240236  T
Q  316 tga 318  Q
    |||    
T  5240235 tga 5240233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 21032536 - 21032643
Alignment:
Q  189 cagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatc 288  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||||||| ||||||  || || || || ||||| || | |||||||||||||| ||||    
T  21032536 cagtcactattataagcaaaactccactttttatatacattgaataattaatgtattcagtctataataaagactagatacattaattattcaatatatc 21032635  T
Q  289 taaaaagt 296  Q
    ||||||||    
T  21032636 taaaaagt 21032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 29486509 - 29486632
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||||||||| ||||| ||| ||||||||||||||||| |||||| |||  | |  || |||||  | | ||||||||||||||||||||||||||    
T  29486509 tattataagcaaaatttcacattttagatacattgaataattaatgtatctagtttatgataaagactaaatatattaattattcaatgtatctaaaaag 29486608  T
Q  296 tgaagttttacttataatagtgat 319  Q
    | |  |||| ||||||||||||||    
T  29486609 tcagattttgcttataatagtgat 29486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 319
Target Start/End: Complemental strand, 7604323 - 7604194
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataa-ttcatgtatatagcctttattatagactggacagattaattattcaatgtatct 289  Q
    |||||||||||||| |||| || |||||| ||||| | ||||||| || ||| || ||| |||||||||||||| ||   |||| ||||||| | |||||    
T  7604323 gtcattattataagtaaaatttgactttttagatatactgaataaattaatggatttagtctttattatagacttgatgcattacttattcagtatatct 7604224  T
Q  290 aaaaagtgaagttttacttataatagtgat 319  Q
    |||||||||| |||| ||||||||||||||    
T  7604223 aaaaagtgaaattttgcttataatagtgat 7604194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 42364354 - 42364227
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||   |||| |||  | || || |||||  | | |||||||||||||||||| ||    
T  42364354 gtcactattataagcaaaacttcactttttagatacattgaataattagggtatctagtttataataaagactacatacattaattattcaatgtattta 42364255  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    |||||| || ||||  |||||| |||||    
T  42364254 aaaagtaaatttttgtttataacagtga 42364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 26221150 - 26221035
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 298  Q
    |||||| |||||||||||||| ||||||| ||||||||| || ||||    || || || | ||| || | ||||||||||||||||||||||||||| |    
T  26221150 tataagtaaaacttcactttttagatacactgaataattaatatataccatctataataaaaactagatacattaattattcaatgtatctaaaaagtaa 26221051  T
Q  299 agttttacttataata 314  Q
    ||||||  ||||||||    
T  26221050 agttttgtttataata 26221035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 5240232 - 5240335
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| |||||||||||||| || | |||| ||||||||||||||||| |||||| |||  | || || ||  | || | |||||||||||||||||||||    
T  5240232 gtcactattataagcaaaatttgattttttagatacattgaataattaatgtatctagtatataataaagtttagatacattaattattcaatgtatcta 5240331  T
Q  291 aaaa 294  Q
    ||||    
T  5240332 aaaa 5240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 892606 - 892560
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 316  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  892606 attaattattcaatgaatctaaaaagtgaatttttgcttataatagt 892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 892562 - 892610
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||||||||||||| ||||||||| |||| |||||||||||| ||||||    
T  892562 tattataagcaaaaattcactttttagattcattgaataattaatgtat 892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 6834085 - 6834041
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataata 314  Q
    |||||||||||||| |||||||||||| || ||||||||||||||    
T  6834085 attaattattcaatatatctaaaaagtaaaattttacttataata 6834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 6834035 - 6834089
Alignment:
Q  190 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    ||||||||||||||| |||| || |||||| ||||| ||||||||||| ||||||    
T  6834035 agtcattattataagtaaaattttactttttagatatattgaataattaatgtat 6834089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 35969225 - 35969263
Alignment:
Q  281 aatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  35969225 aatgtatctaaaaagtgaatttttacttatattagtgat 35969263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 1098678 - 1098634
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||    
T  1098678 ttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 36864512 - 36864556
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||| |||| |||||||||||||| ||||| |||||||||||||    
T  36864512 ttattgaatgaatctaaaaagtgaacttttatttataatagtgat 36864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 6197832 - 6197959
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||| || |||||| ||| |||||| ||||| |  | | |||||||||| ||||||||||    
T  6197832 gtcattattataagcaaaactccactttttagatacattaaatagttaatgtatctagtctttatcatagattaaatacattaattatttaatgtatcta 6197931  T
Q  291 aaaagtgaagttttacttataatagtga 318  Q
    |||||| ||||||| |||||||||||||    
T  6197932 aaaagtaaagttttgcttataatagtga 6197959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 13325225 - 13325116
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||||||||||||| |||||||||||||| || || ||||||||||  |||||| |||    ||||||| ||| || | |||||||||||||||||||||    
T  13325225 gtcattattataaggaaaacttcactttttaggtatattgaataatcaatgtatttag----tattataaactagatacattaattattcaatgtatcta 13325130  T
Q  291 aaaagtgaagtttt 304  Q
    |||| |||||||||    
T  13325129 aaaattgaagtttt 13325116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 6197960 - 6197837
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| ||||||||||||||||| |||||| ||||||||| ||||||| |||||| ||  || |  || ||||| || | ||||| |||| ||||||||||    
T  6197960 gtcactattataagcaaaactttactttttagatacattaaataattaatgtatttaatctatgataaagactagatacattaactatttaatgtatcta 6197861  T
Q  291 aaaagtgaagttttacttataata 314  Q
    ||||||| |||||| |||||||||    
T  6197860 aaaagtggagttttgcttataata 6197837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 318
Target Start/End: Original strand, 27938998 - 27939124
Alignment:
Q  192 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaa 291  Q
    ||||||| ||||| |||||| ||||||  |  | |||||||||||  |||||| ||| ||||||||||||||||  | ||| ||||||||||||||||||    
T  27938998 tcattatcataagtaaaactccactttataagtgcattgaataatcaatgtatctagtctttattatagactgggtacattcattattcaatgtatctaa 27939097  T
Q  292 aaagtgaagttttacttataatagtga 318  Q
    ||| | || ||||||| ||||||||||    
T  27939098 aaaataaaattttactcataatagtga 27939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 11322690 - 11322569
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||||||||||| || |||| ||||| ||||||||||| || |||  |  ||||||||||||  ||| | ||||||||||||||| ||||||||||    
T  11322690 tattataagcaaaact-caatttttagatatattgaataattaatatatccaatctttattatagatcggatacattaattattcaatgcatctaaaaag 11322592  T
Q  296 tgaagttttacttataatagtgat 319  Q
    || | |||| ||||||| ||||||    
T  11322591 tg-actttttcttataacagtgat 11322569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 13325116 - 13325220
Alignment:
Q  206 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 305  Q
    ||||||||| |||| ||||||||||||||||| |||||| |||  ||||| |||  ||  | | ||| |||||||||| || |||||||||||||||||     
T  13325116 aaaacttcaatttttagatacattgaataattaatgtatctag--tttataata--ctaaatacattgattattcaatatacctaaaaagtgaagttttc 13325211  T
Q  306 cttataata 314  Q
    |||||||||    
T  13325212 cttataata 13325220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 11322589 - 11322695
Alignment:
Q  212 tcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttata 311  Q
    |||||||| |||| |||||||||||| ||||||     || || || ||| |||| | |||||||||||||| |||||||||| || |||||| ||||||    
T  11322589 tcactttttagatgcattgaataattaatgtatccgatctataataaagattggatatattaattattcaatatatctaaaaattg-agttttgcttata 11322687  T
Q  312 atagtgat 319  Q
    ||||||||    
T  11322688 atagtgat 11322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 158444 - 158486
Alignment:
Q  202 aagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||    
T  158444 aagcaaaatttcactttttagatacattgaataattaatgtat 158486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 158482 - 158448
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagtttt 304  Q
    |||||||||||||||||||||||||||||| ||||    
T  158482 attaattattcaatgtatctaaaaagtgaaatttt 158448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 1214021 - 1214067
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 316  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  1214021 attaattattcaatatatctaaaaagtagagttttatttataatagt 1214067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 43140681 - 43140629
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    ||||||||||||| |||||||||| |||| |||||| |||||||||| ||||||    
T  43140681 gtcattattataaacaaaacttcattttttagatac-ttgaataattaatgtat 43140629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 28205809 - 28205857
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||||||| ||||| || | |||||||||||||||||||||| ||||||    
T  28205809 tattataaacaaaatttaatttttcagatacattgaataattaatgtat 28205857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 43140601 - 43140553
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||||||||||| |||| | |||||  ||||||||||||    
T  43140601 attaattattcaatgtatctaataagtaatgttttgtttataatagtga 43140553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 4132392 - 4132516
Alignment:
Q  191 gtcattattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatct 289  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||| ||||||||||  |||||||||||||  | | ||||| ||||||||||||||    
T  4132392 gtcaatattataagcaaaatttcacttttttagatacattgaataattaatgtatatagtatttattatagactaaatacattaaatattcaatgtatct 4132491  T
Q  290 aaaaagtgaagttttacttataata 314  Q
    ||||||| |||||||  ||||||||    
T  4132492 aaaaagttaagttttgtttataata 4132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 4132521 - 4132397
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatct- 289  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| || |||||| ||| || || || | |||  | | ||||||||||||||||||||     
T  4132521 gtcattattataaacaaaacttaactttttagatacattgaatatttaatgtatttagtctataataaatactatatacattaattattcaatgtatcta 4132422  T
Q  290 aaaaagtgaagttttacttataata 314  Q
    |||||||||| |||| |||||||||    
T  4132421 aaaaagtgaaattttgcttataata 4132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 38646177 - 38646315
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagatt-aattattcaatgtatctaaaaa 294  Q
    ||||||||| ||||||  |||||| ||||||||||||||||| || ||| ||   ||| |||||||| | | | ||| ||||||||||| |||||||| |    
T  38646177 tattataagtaaaactcaactttttagatacattgaataattaatatatttaatttttgttatagaccgaatacattaaattattcaatatatctaaata 38646276  T
Q  295 gtgaagttttacttataatagtgatgagagtgagtatat 333  Q
    |||||||||| |||||||||||||  |||| ||||||||    
T  38646277 gtgaagttttgcttataatagtgaccagagggagtatat 38646315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 41115556 - 41115698
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    ||||| |||||||| ||||||  |||||  |||||||||||| |||| |||||| ||  |||||||||||| | || | |||||||||  ||||||| ||    
T  41115556 gtcatcattataagtaaaactgtactttgtagatacattgaacaattaatgtatctaatctttattatagagtagatacattaattatgtaatgtatata 41115655  T
Q  291 aaaagtgaagttttacttataatagtgatgagagtgagtatat 333  Q
    |||| | ||||||||||||||||||| |  |||| ||||||||    
T  41115656 aaaaattaagttttacttataatagttaccagagagagtatat 41115698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 26982819 - 26982771
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26982819 attaattattcaatgtatctaaaaagtgaagttttgcttataatagtga 26982771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 26982770 - 26982823
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26982770 gtcactattataagcaaaacttcactttttagatacattgaataattaatgtat 26982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 43250474 - 43250417
Alignment:
Q  190 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatata 247  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  43250474 agtcactattataagcaaaactttactttttagatacattgaataattaatgtatata 43250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 45578066 - 45578005
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagtat 331  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||  |||| ||||||    
T  45578066 attaattgttcaatgtatctaaaaagtgaaattttacttataatagtgactagagagagtat 45578005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 43250424 - 43250472
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  43250424 attaattattcaatgtatctaaaaagtaaagttttgcttataatagtga 43250472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 38646221 - 38646175
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 316  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  38646221 attaattattcaatgtatctaaaaagttgagttttacttataatagt 38646175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 318
Target Start/End: Complemental strand, 43250418 - 43250376
Alignment:
Q  276 tattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  43250418 tattcaatgtatctaaaaagtaaagttttgcttataatagtga 43250376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 21857124 - 21857076
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||||    
T  21857124 attaattattcaatgtgtctaaaaagtaaacttttgcttataatagtga 21857076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 45578016 - 45578072
Alignment:
Q  190 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatat 246  Q
    ||||| ||||||||| |||| ||||||||| |||||||||||| |||| ||||||||    
T  45578016 agtcactattataagtaaaatttcactttttagatacattgaacaattaatgtatat 45578072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 43250375 - 43250418
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaata 234  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||    
T  43250375 gtcactattataagcaaaactttactttttagatacattgaata 43250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 38646301 - 38646255
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataatt 237  Q
    |||| ||||||||||||||||||||| || ||||| |||||||||||    
T  38646301 gtcactattataagcaaaacttcactatttagatatattgaataatt 38646255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 21587841 - 21587894
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||||||||||||  |||| |||| ||||||| ||||||    
T  21587841 gtcactattataagcaaaacttcactttcaagatgcattaaataattaatgtat 21587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 21857075 - 21857128
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    |||| |||||||||||||| || |||||| ||| ||||||||||||| ||||||    
T  21857075 gtcactattataagcaaaagtttactttttagacacattgaataattaatgtat 21857128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 24155642 - 24155691
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    |||||||||| |||||||||||||| |||||||||  |||| ||||||||    
T  24155642 attaattatttaatgtatctaaaaattgaagttttgtttatgatagtgat 24155691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 34840620 - 34840673
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 244  Q
    ||||||||||||||||||| ||||||||| |||| |||| ||||| | ||||||    
T  34840620 gtcattattataagcaaaagttcactttttagattcattcaataaatgatgtat 34840673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 41115679 - 41115562
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    ||||||||| ||||||| | |||| | |||||||  |||||| |||||| ||  || || || ||| | || | ||||||| ||||||||||||| ||||    
T  41115679 tattataagtaaaacttaattttttatatacattacataattaatgtatctactctataataaagattagatacattaattgttcaatgtatctacaaag 41115580  T
Q  296 tgaagttttacttataat 313  Q
    |  |||||||||||||||    
T  41115579 tacagttttacttataat 41115562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 21587890 - 21587842
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||| |||| ||||  ||||||||||||| |||||||||||||    
T  21587890 attaattatttaatgcatcttgaaagtgaagttttgcttataatagtga 21587842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 21857171 - 21857219
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    |||||||||||||| | |||||||| |||| |||| |||||||||||||    
T  21857171 attaattattcaatatgtctaaaaaatgaatttttgcttataatagtga 21857219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 30457820 - 30457864
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||| |||| || ||||||||||| |||||||||||||||||||    
T  30457820 ttattgaatgaatttaaaaagtgaacttttacttataatagtgat 30457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 34703569 - 34703509
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattata 259  Q
    ||||||||||| ||||||||| ||||||||| ||| | | |||||||| | ||||||||||    
T  34703569 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 34703509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 40417032 - 40416972
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattata 259  Q
    ||||||||||| ||||||||| ||||||||| ||| | | |||||||| | ||||||||||    
T  40417032 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 40416972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 8352269 - 8352129
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||| ||  || || || | | | || | |||||| ||||||||||||||    
T  8352269 gtcattattataagcaaaacttccctttttagatatattgaataattaatgtatttattctataataaatattagatacattaatcattcaatgtatcta 8352170  T
Q  291 aaaagtgaagttttacttataatagtgatgagagtgagtat 331  Q
    |||| ||||||||| |||||||||||||  |||| ||||||    
T  8352169 aaaaatgaagttttgcttataatagtgaccagagggagtat 8352129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 8352141 - 8352264
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 290  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| ||| |||||| ||   ||||||||||| |  | | |||||||||||||| ||||||    
T  8352141 gtcactattataagcaaaacttcattttttagatacattgaatgattaatgtatctaatatttattatagaataaatacattaattattcaatatatcta 8352240  T
Q  291 aaaagtgaagttttacttataata 314  Q
    ||||| |||||||| |||||||||    
T  8352241 aaaagggaagttttgcttataata 8352264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 26468289 - 26468419
Alignment:
Q  180 tactacattcagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattatt 279  Q
    |||| ||||| |||| |||||||| ||||| ||||||||| | ||||||||||||||| |||||| ||   ||||||||||||   | | || |||||||    
T  26468289 tactccattcggtcactattataaacaaaatttcactttttaaatacattgaataattaatgtatctaatttttattatagaccatatatatcaattatt 26468388  T
Q  280 caatgtatctaaaaagtgaagttttacttat 310  Q
    ||||||||  |||||||||| ||||||||||    
T  26468389 caatgtataaaaaaagtgaaattttacttat 26468419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 31635757 - 31635871
Alignment:
Q  197 attataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagt 296  Q
    |||| ||| |||||||||||||| | ||||||||||||||  ||||||   |   |||||||||||| || | |||| ||||||||||||||||||||||    
T  31635757 attacaagtaaaacttcactttttatatacattgaataataaatgtattcggtgcttattatagactagatatattagttattcaatgtatctaaaaagt 31635856  T
Q  297 gaagttttacttata 311  Q
    ||| |||| ||||||    
T  31635857 gaaattttgcttata 31635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 14773852 - 14773765
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaat 283  Q
    |||||||||||||| || |||||| ||||| |||| |||||| |||||| ||| || |||||||||||||| | | ||||||||||||    
T  14773852 tattataagcaaaatttaactttttagatatattgtataattaatgtatctagtctgtattatagactggatacaataattattcaat 14773765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 31635871 - 31635752
Alignment:
Q  199 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 298  Q
    ||||||||||| ||||||||| ||||||||||||||| | || ||| ||| || || ||   || | | | ||| |||||||||||||| ||||||||||    
T  31635871 tataagcaaaatttcactttttagatacattgaataactaatatatctagtctataataagcaccgaatacatttattattcaatgtatataaaaagtga 31635772  T
Q  299 agttttacttataatagtga 318  Q
    |||||||||| |||| ||||    
T  31635771 agttttacttgtaatggtga 31635752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 43731130 - 43731248
Alignment:
Q  196 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 295  Q
    |||||||||||||| || || | | ||||||||| ||||||| |||||| |||  ||||||| | | | || | ||||| |||||||||||||||||||     
T  43731130 tattataagcaaaaatttacatgtaagatacattcaataattaatgtatctagtttttattaaaaaatagatacattaactattcaatgtatctaaaaaa 43731229  T
Q  296 tgaagttttacttataata 314  Q
    |||| |||| |||||||||    
T  43731230 tgaaattttgcttataata 43731248  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 26468419 - 26468301
Alignment:
Q  200 ataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaa 299  Q
    ||||| |||| |||||||||   ||||||||||||||| || ||||| | || || || | | | || | |||||||||||||||||| |||||||||||    
T  26468419 ataagtaaaatttcactttttttatacattgaataattgatatatatggtctataataaaaattagatacattaattattcaatgtatttaaaaagtgaa 26468320  T
Q  300 gttttacttataatagtga 318  Q
     ||||  ||||||||||||    
T  26468319 attttgtttataatagtga 26468301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 43731250 - 43731128
Alignment:
Q  194 attattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaa 293  Q
    |||||||||||||||| |||| |||| |||||||||||||| || |||||| ||   |||| || | ||| || | |||||||||| ||||||||| | |    
T  43731250 attattataagcaaaatttcattttttagatacattgaatagttaatgtatctattttttaataaaaactagatacattaattattgaatgtatcttaca 43731151  T
Q  294 agtgaagttttacttataatagt 316  Q
     || || |||| |||||||||||    
T  43731150 tgtaaatttttgcttataatagt 43731128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 30800254 - 30800186
Alignment:
Q  250 ctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 318  Q
    ||||||||||||||||| | |||||| |||||||||||||| ||||| || ||||  |||||| |||||    
T  30800254 ctttattatagactggatacattaatcattcaatgtatctagaaagtaaaattttgtttataagagtga 30800186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 897042 - 897120
Alignment:
Q  216 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 294  Q
    |||| ||||||||| ||||||| |||||| ||| ||| ||| || |  ||| | |||||||||||||||||||||||||    
T  897042 tttttagatacatttaataattaatgtatttagtcttcattgtaaatgggatacattaattattcaatgtatctaaaaa 897120  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 39940571 - 39940620
Alignment:
Q  270 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    |||| ||||| |||| ||||||||||| || |||||||||||||||||||    
T  39940571 attatttattgaatgaatctaaaaagtaaatttttacttataatagtgat 39940620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 10256831 - 10256787
Alignment:
Q  275 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 319  Q
    ||||| |||| |||||||||||||| |||| ||||||||||||||    
T  10256831 ttattgaatgaatctaaaaagtgaattttttcttataatagtgat 10256787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 34009 - 33971
Alignment:
Q  191 gtcattattataagcaaaacttcacttttcagatacatt 229  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34009 gtcattattacaagcaaaacttcactttttagatacatt 33971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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