View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1697_high_5 (Length: 243)
Name: NF1697_high_5
Description: NF1697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1697_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 51231571 - 51231407
Alignment:
| Q |
73 |
aaggcaaggagaatatattaaatggaaatatagagtatatcactataacgtagactccatccaaaaataatgacaaggcaaataaagaaaaacaccccaa |
172 |
Q |
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| T |
51231571 |
aaggctaggagaatatataaaaaggaaatatagagtatatcactataacgtagactccatccaaaaataatgacaaggcaaataaagaaaaacaccccaa |
51231472 |
T |
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| Q |
173 |
aagagagagcactgcgtacatatacagccatatggaagggacctaaataaagataccccacagaa |
237 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51231471 |
aagagagagcactgtgtacatatacagccatatggaagggacctaaataaagataccccacagaa |
51231407 |
T |
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